Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

37965543 .. 37969023

Gene Structure 3481 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ57198

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2880 bp

ATGGCTGAAGGAGTTGTCACAGTTGTGGCTGAAGGGATCAAGCCTCTGGGAGATTTCATCATTCAGCAAGCGAAGTTCTTGAGCGGAGTCAGCTATCAAGTTGAGCTTGCACAAGTTGAACTTCACTTGATCCGCGGCTTCCTCAGAGATGCAGATAAAAGACAAGGAGAAGAAGAGGTAGTCCGCATTTGGGTTAAACTGATTAGAGATGCTGCTTATGACTTGGAGGATGTCACTGAATCTTTTGCATTGAAAGTGGCTTCCAGGAGGAGAGGAGGTACTGTGAAGATTGTTCTCAAAAAGTTTGCCTGCATCTTTAATGAAGGACTTGATCGATACAAGATTGGGTCTGAAATTGAGGATATTATGACCAAACTTTCTCATCTGAGGTCGAGTTTGCAAAGTTATGACATCAGGCAAATAAAAGGGGTTGAAAGTGTGGCTTCAGTTTTCAAGGGGCAACGAGATAGGAGGCTAACTTATGGTCATGAAGTTGAAAGTCATATTGTTGGGTTGAAGGAAAACACGGACACGCTGGTCAAAGAGTTGCTAAGAGAAGGAAAGCGACACCGTGTTGTTTCTATTTGGGGGATGGGCGGCTCCGGAAAAACTACTCTTGCGAAACAGGTTTTTCTTCAAGATGAAGTTAAGCGTCATTTTGATTGTTCTGCTTGGATCTGTATATCTCAACAATGTGAAGGAAGAGATGTTTTGGAAGAGATTTTCATTAAACTCAGTTCCCCAACACAAGAGCAAAGGAAAGAAATTGCCAAGATGAGAAAGGATGAAATAGCAGAGAAGGTTTGTAGTATCCAACGAGAAAAGAGAAGTCTGGTGGTCCTTGATGACATATGGACTCACGAGGCTTGGGATTCCATAAAAGCTGGATTCCCAATCAACGAGGAAACAGAAAGCCGGATATTACTCACCACTCACCAGGAAATTTATGCAAAGAAGAGAGAATTAGGAAAGAAGATGCTCGATCGTTGTTCAGGTTTTCCATTAGCCATCAGTGTGCTCGCTGGTCTTTTAAGTAGAAGAGAGACAGATGCTGAATGGGAAACTGTACTTGGAAGTGTTGATGCATACATAATGAGAGGCTCAAATGTACTTGAAAGAGAAAACACCGGTCAAGAATATGGTGTATCGGGTGTCTTGGCATTGAGTTATGATGACTTACCATCTCACTTAAAACTCTGTTTTCTATACTTAGCCCATTTTCCTGAGGATCATGAGATACCGGTAAAAAGATTGACTCAATTATGGATTGCAGAAGGTTTTATAACTTCAACGTCAGAAATGGATGTCTCAGTGGAAATATTGGAAGAAGTATCGTATAGTTGCCTAGTTGAATTGGTGGAAAGATCTATGATTCAAGTTGCAGAATATGGTTTAAGCGGGAAGGTGAAAACTTGCCGTCTCCATGATCTTATGCGAGACTTGTGCTTGCAAAAGGCAGAAGAGGAGAATTTTCTCCGAATTATTAATTTTTCTGCGGGTCTGGTACATAAGACAGCACTAATTGGTAAGGTTCGAAGACTTGCCATCTACTTGGATGAAAATGTTAAATATGAGTTGAGTGGTAAGGTTAGAAGAGATGGCCACGTTAGGTCTCTATTATACTTTGCCCCAAAAAATTTCGACCAAAACTGGAACAAAAGAATAATGCGGTCAGTATTCAATGACTTCAAATTGCTTAGAGTTCTTAAGTTTGAAAACATATACAGAGATTTTGACTTGCCAAAGACGATTGGGAGTCTAGTCCACCTGAGGCTTCTAAGTCTGAAGGATAGTGCATTTCGTGCGTTGCCATCATCTGTATATAATCTGGTACTTTTGCAGACTCTAGATCTTCGTGGTTTTGCTTTATTTCCTTTTTGGTTTGGTCGGGACAGGGTGACCAAAATCAGAAATGTGTTTTGGAATATGGAGCAACTGAGGCATTTATATTTACCTGCTGAGCACTCTGTATGTGGTAAGAAACTATCATTAGCACCGCTGTGCAATTTGCAGACGTTGGTCAATGTTTCAATCAAGAATTGTGATTTGAATGATCTTGTTCAATTAACCAATCTGAAGAAACTATGCATAACTGCATCACAGTCTAGTGACTTGCAAAAGTTGAAGGACATGTTGATATCAAGAAGCATCACATTTAAACATCTTCGGTCGCTATCTCTGACGGCAGGCGGACATGTTAATGAGGATATACCAAGAGATATAGTTTTAAGGTGTCCTCATTTATGCAAGCTGCTCTTGAGGGGGAAAATGACAGAGTTACCGGAAGAGCTCCTGGACTATGCAAACCTCACCAAGATAACATTGATTACAACAAATCTGAAGGTTGGCCAGATAGAAATAGTGGAGAAGCTGCCCAAGTTAAGGGTGCTTTACCTCGGTTTTGATTCTTTCGAATCAGAAACAATGGTTTTCTCCCAAGGAGGCTTTCCTCATCTGGAATTTCTTACCCTTTATTCTTTGTATAAATTGAAGGAGTGGAGGTTGGAGAAAGAAGCCATGCGTAGTCTTCAAAGATTGCGCATTGAATGGTGCCGAGAATTGCGGGCAGTTCCAGATGGGCTTCAGGAGATTACTACCCTCAAGGAATTAACAATTAACGGGATGCCCAGTACATTCTGCAGTAGAGTTGAGGAAGGAGGGGAGGATTTCTACAAAATCAAACATGTGCCTTCTCTTATAATCACAAATGCCTGGGGCAAGAAGAAAGACAAGGAGCCAGAAATGGAGGAAGCAGCAGGTGCGTCTCAACTAGTTGCGGGTCCAGCCGGTGACTCTCATCGGGAATCAACTGTGGATGCTCCTCCTCCTCCTCCTCCTGATGAGAAAACAGAGGAAATACAAGCTTCATCCACTCCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

959

Amino Acids

109.44

Weight (kDa)

7.54

Isoelectric Point (pI)

46.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	13 - 91	2.1e-18	Rx N-terminal domain
NB-ARC	PF00931	174 - 315	3.4e-33	NB-ARC domain
WHD_DRP	PF23559	407 - 482	2.9e-18	Disease resistance protein Winged helix domain
LRR_14	PF23598	554 - 873	2.1e-33	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1283, 2699
AarI	CACCTGC	1 cut(s)	2747
AasI	GACNNNNNNGTC	1 cut(s)	536
Acc16I	TGCGCA	1 cut(s)	2540
Acc36I	ACCTGC	2 cut(s)	1963, 2747
AccB1I	GGYRCC	1 cut(s)	2550
AccBSI	CCGCTC	1 cut(s)	84
AccII	CGCG	1 cut(s)	135
AccIII	TCCGGA	1 cut(s)	602
AclWI	GGATC	4 cut(s)	44, 124, 683, 1236
AcoI	YGGCCR	2 cut(s)	1600, 2347
AcsI	RAATTY	4 cut(s)	942, 1468, 1636, 2459
AcuI	CTGAAG	7 cut(s)	27, 51, 429, 1805, 2096, 2360, 2567
AfaI	GTAC	6 cut(s)	280, 1068, 1110, 1506, 1833, 2632
AfiI	CCNNNNNNNGG	2 cut(s)	190, 2382
AflII	CTTAAG	1 cut(s)	1706
AflIII	ACRYGT	3 cut(s)	2130, 2194, 2683
AgeI	ACCGGT	2 cut(s)	1127, 1240
AhlI	ACTAGT	1 cut(s)	2770
AjnI	CCWGG	4 cut(s)	263, 936, 2292, 2711
AjuI	GAANNNNNNNTTGG	6 cut(s)	1053, 1085, 1903, 1935, 2430, 2462
AleI	CACNNNNGTG	2 cut(s)	23, 1999
AluBI	AGCT	7 cut(s)	93, 106, 884, 2251, 2290, 2371, 2864
AluI	AGCT	7 cut(s)	93, 106, 884, 2251, 2290, 2371, 2864
Alw21I	GWGCWC	3 cut(s)	1020, 1965, 2292
Alw26I	GTCTC	6 cut(s)	1037, 1312, 1424, 1431, 1617, 2769
AlwI	GGATC	4 cut(s)	44, 124, 683, 1236
AlwNI	CAGNNNCTG	1 cut(s)	1052
Aor13HI	TCCGGA	1 cut(s)	602
AoxI	GGCC	2 cut(s)	1600, 2347
ApeKI	GCWGC	4 cut(s)	212, 2251, 2371, 2753
ApoI	RAATTY	4 cut(s)	942, 1468, 1636, 2459
AseI	ATTAAT	1 cut(s)	1485
AsiGI	ACCGGT	2 cut(s)	1127, 1240
AspLEI	GCGC	1 cut(s)	2541
AspS9I	GGNCC	2 cut(s)	838, 2780
AsuHPI	GGTGA	6 cut(s)	919, 926, 1417, 1909, 2302, 2801
AsuII	TTCGAA	2 cut(s)	1534, 2412
AvaII	GGWCC	2 cut(s)	838, 2780
AxyI	CCTNAGG	2 cut(s)	1224, 1769
BalI	TGGCCA	2 cut(s)	1602, 2349
BanI	GGYRCC	1 cut(s)	2550
BanII	GRGCYC	1 cut(s)	2292
BauI	CACGAG	1 cut(s)	860
BbsI	GAAGAC	2 cut(s)	1543, 2519
Bbv12I	GWGCWC	3 cut(s)	1020, 1965, 2292
BbvI	GCAGC	4 cut(s)	199, 2238, 2358, 2765
BccI	CCATC	7 cut(s)	586, 1016, 1189, 1553, 1592, 1819, 2570
BceAI	ACGGC	2 cut(s)	1401, 2199
BcgI	CGANNNNNNTGC	2 cut(s)	1425, 1459
BciT130I	CCWGG	4 cut(s)	265, 938, 2294, 2713
BciVI	GTATCC	1 cut(s)	821
BcoDI	GTCTC	6 cut(s)	1037, 1312, 1424, 1431, 1617, 2769
BcuI	ACTAGT	1 cut(s)	2770
BfaI	CTAG	5 cut(s)	1346, 1760, 1847, 2106, 2771
BfmI	CTRYAG	1 cut(s)	2638
BfrI	CTTAAG	1 cut(s)	1706
BfuAI	ACCTGC	2 cut(s)	1963, 2747
BfuI	GTATCC	1 cut(s)	821
BglII	AGATCT	2 cut(s)	1364, 1849
BisI	GCNGC	6 cut(s)	136, 213, 598, 2252, 2372, 2754
BlpI	GCTNAGC	1 cut(s)	1959
BlsI	GCNGC	6 cut(s)	137, 214, 599, 2253, 2373, 2755
Bme1390I	CCNGG	4 cut(s)	265, 938, 2294, 2713
Bme18I	GGWCC	2 cut(s)	838, 2780
BmgT120I	GGNCC	2 cut(s)	838, 2780
BmiI	GGNNCC	4 cut(s)	601, 2552, 2736, 2781
BmrFI	CCNGG	4 cut(s)	265, 938, 2294, 2713
BmrI	ACTGGG	1 cut(s)	2622
BmuI	ACTGGG	1 cut(s)	2622
BoxI	GACNNNNGTC	1 cut(s)	2018
BpiI	GAAGAC	2 cut(s)	1543, 2519
Bpu1102I	GCTNAGC	1 cut(s)	1959
Bpu14I	TTCGAA	2 cut(s)	1534, 2412
BpuEI	CTTGAG	3 cut(s)	100, 2278, 2585
Bsa29I	ATCGAT	1 cut(s)	334
BsaI	GGTCTC	1 cut(s)	1617
BsaJI	CCNNGG	4 cut(s)	133, 2395, 2437, 2712
BsaWI	WCCGGW	4 cut(s)	602, 1127, 1240, 2281
BsaXI	ACNNNNNCTCC	6 cut(s)	262, 267, 292, 297, 2486, 2516
Bsc4I	CCNNNNNNNGG	2 cut(s)	190, 2382
Bse118I	RCCGGY	3 cut(s)	1127, 1240, 2786
Bse1I	ACTGG	2 cut(s)	1655, 2628
Bse21I	CCTNAGG	2 cut(s)	1224, 1769
BseAI	TCCGGA	1 cut(s)	602
BseBI	CCWGG	4 cut(s)	265, 938, 2294, 2713
BseCI	ATCGAT	1 cut(s)	334
BseDI	CCNNGG	4 cut(s)	133, 2395, 2437, 2712
BseGI	GGATG	8 cut(s)	235, 597, 790, 1309, 1561, 2628, 2821, 2867
BseLI	CCNNNNNNNGG	2 cut(s)	190, 2382
BseMII	CTCAG	8 cut(s)	157, 377, 748, 1215, 1323, 1760, 1928, 1950
BseNI	ACTGG	2 cut(s)	1655, 2628
BseRI	GAGGAG	8 cut(s)	283, 288, 1478, 2811, 2814, 2817, 2820, 2823
BseXI	GCAGC	4 cut(s)	199, 2238, 2358, 2765
Bsh1236I	CGCG	1 cut(s)	135
Bsh1285I	CGRYCG	2 cut(s)	985, 2171
BshFI	GGCC	2 cut(s)	1602, 2349
BshNI	GGYRCC	1 cut(s)	2550
BshTI	ACCGGT	2 cut(s)	1127, 1240
BshVI	ATCGAT	1 cut(s)	334
BsiEI	CGRYCG	2 cut(s)	985, 2171
BsiHKAI	GWGCWC	3 cut(s)	1020, 1965, 2292
BsiSI	CCGG	6 cut(s)	603, 916, 1128, 1241, 2282, 2787
BslFI	GGGAC	1 cut(s)	1904
BslI	CCNNNNNNNGG	2 cut(s)	190, 2382
BsmAI	GTCTC	6 cut(s)	1037, 1312, 1424, 1431, 1617, 2769
BsmBI	CGTCTC	2 cut(s)	1424, 2769
BsmFI	GGGAC	1 cut(s)	1904
BsnI	GGCC	2 cut(s)	1602, 2349
Bso31I	GGTCTC	1 cut(s)	1617
Bsp119I	TTCGAA	2 cut(s)	1534, 2412
Bsp1286I	GDGCHC	3 cut(s)	1020, 1965, 2292
Bsp13I	TCCGGA	1 cut(s)	602
Bsp1720I	GCTNAGC	1 cut(s)	1959
BspANI	GGCC	2 cut(s)	1602, 2349
BspCNI	CTCAG	8 cut(s)	156, 378, 747, 1216, 1322, 1761, 1929, 1951
BspDI	ATCGAT	1 cut(s)	334
BspEI	TCCGGA	1 cut(s)	602
BspFNI	CGCG	1 cut(s)	135
BspHI	TCATGA	2 cut(s)	487, 1231
BspLI	GGNNCC	4 cut(s)	601, 2552, 2736, 2781
BspMAI	CTGCAG	1 cut(s)	2642
BspMI	ACCTGC	2 cut(s)	1963, 2747
BspPI	GGATC	4 cut(s)	44, 124, 683, 1236
BspQI	GCTCTTC	1 cut(s)	2280
BspT104I	TTCGAA	2 cut(s)	1534, 2412
BspT107I	GGYRCC	1 cut(s)	2550
BspTI	CTTAAG	1 cut(s)	1706
BspTNI	GGTCTC	1 cut(s)	1617
BsrBI	CCGCTC	1 cut(s)	84
BsrFI	RCCGGY	3 cut(s)	1127, 1240, 2786
BsrI	ACTGG	2 cut(s)	1655, 2628
BssAI	RCCGGY	3 cut(s)	1127, 1240, 2786
BssECI	CCNNGG	4 cut(s)	133, 2395, 2437, 2712
BssSI	CACGAG	1 cut(s)	860
BssT1I	CCWWGG	1 cut(s)	2437
Bst2BI	CACGAG	1 cut(s)	860
Bst2UI	CCWGG	4 cut(s)	265, 938, 2294, 2713
Bst4CI	ACNGT	6 cut(s)	22, 283, 572, 1066, 2103, 2812
Bst6I	CTCTTC	8 cut(s)	168, 697, 711, 950, 1033, 1455, 1588, 2280
BstAFI	CTTAAG	1 cut(s)	1706
BstAPI	GCANNNNNTGC	2 cut(s)	1802, 2759
BstBI	TTCGAA	2 cut(s)	1534, 2412
BstC8I	GCNNGC	8 cut(s)	69, 108, 310, 1020, 1448, 2188, 2249, 2565
BstDSI	CCRYGG	1 cut(s)	133
BstEII	GGTNACC	1 cut(s)	1897
BstF5I	GGATG	8 cut(s)	235, 597, 790, 1309, 1561, 2628, 2821, 2867
BstFNI	CGCG	1 cut(s)	135
BstHHI	GCGC	1 cut(s)	2541
BstMAI	GTCTC	6 cut(s)	1037, 1312, 1424, 1431, 1617, 2769
BstMCI	CGRYCG	2 cut(s)	985, 2171
BstMWI	GCNNNNNNNGC	5 cut(s)	90, 1802, 1939, 2759, 2783
BstNI	CCWGG	4 cut(s)	265, 938, 2294, 2713
BstNSI	RCATGY	3 cut(s)	2134, 2198, 2687
BstPAI	GACNNNNGTC	1 cut(s)	2018
BstPI	GGTNACC	1 cut(s)	1897
BstSCI	CCNGG	4 cut(s)	263, 936, 2292, 2711
BstSFI	CTRYAG	1 cut(s)	2638
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	4 cut(s)	199, 2238, 2358, 2765
BstV2I	GAAGAC	2 cut(s)	1543, 2519
BstX2I	RGATCY	3 cut(s)	675, 1364, 1849
BstXI	CCANNNNNNTGG	1 cut(s)	1552
BstYI	RGATCY	3 cut(s)	675, 1364, 1849
Bsu15I	ATCGAT	1 cut(s)	334
Bsu36I	CCTNAGG	2 cut(s)	1224, 1769
BsuI	GTATCC	1 cut(s)	821
BsuRI	GGCC	2 cut(s)	1602, 2349
BsuTUI	ATCGAT	1 cut(s)	334
BtgI	CCRYGG	1 cut(s)	133
BtsCI	GGATG	8 cut(s)	235, 597, 790, 1309, 1561, 2628, 2821, 2867
BtsIMutI	CAGTG	3 cut(s)	234, 1018, 1317
BveI	ACCTGC	2 cut(s)	1963, 2747
Cac8I	GCNNGC	8 cut(s)	69, 108, 310, 1020, 1448, 2188, 2249, 2565
CaiI	CAGNNNCTG	1 cut(s)	1052
CciI	TCATGA	2 cut(s)	487, 1231
CfoI	GCGC	1 cut(s)	2541
Cfr10I	RCCGGY	3 cut(s)	1127, 1240, 2786
Cfr13I	GGNCC	2 cut(s)	838, 2780
Cfr42I	CCGCGG	1 cut(s)	136
ClaI	ATCGAT	1 cut(s)	334
CseI	GACGC	2 cut(s)	641, 2751
Csp6I	GTAC	6 cut(s)	279, 1067, 1109, 1505, 1832, 2631
CspAI	ACCGGT	2 cut(s)	1127, 1240
CviAII	CATG	7 cut(s)	488, 1232, 1424, 2131, 2195, 2518, 2684
CviQI	GTAC	6 cut(s)	279, 1067, 1109, 1505, 1832, 2631
DraI	TTTAAA	1 cut(s)	2158
DrdI	GACNNNNNNGTC	1 cut(s)	536
DseDI	GACNNNNNNGTC	1 cut(s)	536
EaeI	YGGCCR	2 cut(s)	1600, 2347
Eam1104I	CTCTTC	8 cut(s)	168, 697, 711, 950, 1033, 1455, 1588, 2280
EarI	CTCTTC	8 cut(s)	168, 697, 711, 950, 1033, 1455, 1588, 2280
EciI	GGCGGA	1 cut(s)	2205
Ecl136II	GAGCTC	1 cut(s)	2290
Eco130I	CCWWGG	1 cut(s)	2437
Eco24I	GRGCYC	1 cut(s)	2292
Eco31I	GGTCTC	1 cut(s)	1617
Eco32I	GATATC	1 cut(s)	2139
Eco47I	GGWCC	2 cut(s)	838, 2780
Eco53kI	GAGCTC	1 cut(s)	2290
Eco57I	CTGAAG	7 cut(s)	27, 51, 429, 1805, 2096, 2360, 2567
Eco81I	CCTNAGG	2 cut(s)	1224, 1769
Eco91I	GGTNACC	1 cut(s)	1897
EcoICRI	GAGCTC	1 cut(s)	2290
EcoO65I	GGTNACC	1 cut(s)	1897
EcoRII	CCWGG	4 cut(s)	263, 936, 2292, 2711
EcoRV	GATATC	1 cut(s)	2139
EcoT14I	CCWWGG	1 cut(s)	2437
EcoT22I	ATGCAT	2 cut(s)	1087, 2090
EcoT38I	GRGCYC	1 cut(s)	2292
ErhI	CCWWGG	1 cut(s)	2437
Esp3I	CGTCTC	2 cut(s)	1424, 2769
FaeI	CATG	7 cut(s)	491, 1235, 1427, 2134, 2198, 2521, 2687
FalI	AAGNNNNNCTT	8 cut(s)	90, 122, 105, 137, 427, 459, 2240, 2272
FaqI	GGGAC	1 cut(s)	1904
FatI	CATG	7 cut(s)	487, 1231, 1423, 2130, 2194, 2517, 2683
FauI	CCCGC	4 cut(s)	1391, 1489, 2556, 2770
FauNDI	CATATG	1 cut(s)	851
Fnu4HI	GCNGC	6 cut(s)	136, 213, 598, 2252, 2372, 2754
FokI	GGATG	8 cut(s)	242, 604, 797, 1316, 1568, 2635, 2828, 2854
FriOI	GRGCYC	1 cut(s)	2292
Fsp4HI	GCNGC	6 cut(s)	136, 213, 598, 2252, 2372, 2754
FspBI	CTAG	5 cut(s)	1346, 1760, 1847, 2106, 2771
FspI	TGCGCA	1 cut(s)	2540
GlaI	GCGC	1 cut(s)	2540
GluI	GCNGC	6 cut(s)	136, 213, 598, 2252, 2372, 2754
HaeIII	GGCC	2 cut(s)	1602, 2349
HapII	CCGG	6 cut(s)	603, 916, 1128, 1241, 2282, 2787
HgaI	GACGC	2 cut(s)	641, 2751
HhaI	GCGC	1 cut(s)	2541
Hin1II	CATG	7 cut(s)	491, 1235, 1427, 2134, 2198, 2521, 2687
Hin6I	GCGC	1 cut(s)	2539
HinP1I	GCGC	1 cut(s)	2539
HindIII	AAGCTT	1 cut(s)	2862
HpaII	CCGG	6 cut(s)	603, 916, 1128, 1241, 2282, 2787
HphI	GGTGA	6 cut(s)	919, 926, 1417, 1909, 2302, 2801
Hpy166II	GTNNAC	1 cut(s)	1765
Hpy8I	GTNNAC	1 cut(s)	1765
HpyCH4III	ACNGT	6 cut(s)	22, 283, 572, 1066, 2103, 2812
HpyCH4IV	ACGT	3 cut(s)	1292, 1605, 2015
HpyF10VI	GCNNNNNNNGC	5 cut(s)	90, 1802, 1939, 2759, 2783
HpySE526I	ACGT	3 cut(s)	1292, 1605, 2015
Hsp92II	CATG	7 cut(s)	491, 1235, 1427, 2134, 2198, 2521, 2687
HspAI	GCGC	1 cut(s)	2539
Kpn2I	TCCGGA	1 cut(s)	602
KspI	CCGCGG	1 cut(s)	136
LguI	GCTCTTC	1 cut(s)	2280
LmnI	GCTCC	5 cut(s)	605, 1930, 2295, 2734, 2824
Lsp1109I	GCAGC	4 cut(s)	199, 2238, 2358, 2765
MaeI	CTAG	5 cut(s)	1346, 1760, 1847, 2106, 2771
MaeII	ACGT	3 cut(s)	1292, 1605, 2015
MaeIII	GTNAC	6 cut(s)	16, 232, 1897, 2108, 2277, 2789
MbiI	CCGCTC	1 cut(s)	84
MflI	RGATCY	3 cut(s)	675, 1364, 1849
MhlI	GDGCHC	3 cut(s)	1020, 1965, 2292
MlsI	TGGCCA	2 cut(s)	1602, 2349
MluNI	TGGCCA	2 cut(s)	1602, 2349
MlyI	GAGTC	6 cut(s)	96, 850, 1249, 1765, 1837, 2786
MmeI	TCCRAC	2 cut(s)	838, 2484
Mox20I	TGGCCA	2 cut(s)	1602, 2349
Mph1103I	ATGCAT	2 cut(s)	1087, 2090
MroI	TCCGGA	1 cut(s)	602
MscI	TGGCCA	2 cut(s)	1602, 2349
MslI	CAYNNNNRTG	4 cut(s)	23, 1013, 1999, 2199
Msp20I	TGGCCA	2 cut(s)	1602, 2349
MspA1I	CMGCKG	2 cut(s)	135, 1999
MspCI	CTTAAG	1 cut(s)	1706
MspI	CCGG	6 cut(s)	603, 916, 1128, 1241, 2282, 2787
MspR9I	CCNGG	4 cut(s)	265, 938, 2294, 2713
MvaI	CCWGG	4 cut(s)	265, 938, 2294, 2713
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	5 cut(s)	90, 1802, 1939, 2759, 2783
NdeI	CATATG	1 cut(s)	851
NlaIII	CATG	7 cut(s)	491, 1235, 1427, 2134, 2198, 2521, 2687
NlaIV	GGNNCC	4 cut(s)	601, 2552, 2736, 2781
NmeAIII	GCCGAG	1 cut(s)	2579
NmuCI	GTSAC	5 cut(s)	16, 232, 1897, 2108, 2789
NsbI	TGCGCA	1 cut(s)	2540
NsiI	ATGCAT	2 cut(s)	1087, 2090
NspI	RCATGY	3 cut(s)	2134, 2198, 2687
NspV	TTCGAA	2 cut(s)	1534, 2412
OliI	CACNNNNGTG	2 cut(s)	23, 1999
PagI	TCATGA	2 cut(s)	487, 1231
PaqCI	CACCTGC	1 cut(s)	2747
PciI	ACATGT	3 cut(s)	2130, 2194, 2683
PciSI	GCTCTTC	1 cut(s)	2280
PfeI	GAWTC	7 cut(s)	239, 872, 888, 1372, 2405, 2414, 2804
PfoI	TCCNGGA	2 cut(s)	263, 2292
PinAI	ACCGGT	2 cut(s)	1127, 1240
PkrI	GCNGC	6 cut(s)	137, 214, 599, 2253, 2373, 2755
Ple19I	CGATCG	1 cut(s)	985
PleI	GAGTC	6 cut(s)	95, 850, 1249, 1764, 1837, 2786
PpsI	GAGTC	6 cut(s)	95, 850, 1249, 1764, 1837, 2786
PscI	ACATGT	3 cut(s)	2130, 2194, 2683
PshAI	GACNNNNGTC	1 cut(s)	2018
PshBI	ATTAAT	1 cut(s)	1485
PsiI	TTATAA	2 cut(s)	1283, 2699
Psp124BI	GAGCTC	1 cut(s)	2292
Psp6I	CCWGG	4 cut(s)	263, 936, 2292, 2711
PspEI	GGTNACC	1 cut(s)	1897
PspGI	CCWGG	4 cut(s)	263, 936, 2292, 2711
PspN4I	GGNNCC	4 cut(s)	601, 2552, 2736, 2781
PspPI	GGNCC	2 cut(s)	838, 2780
PstI	CTGCAG	1 cut(s)	2642
PstNI	CAGNNNCTG	1 cut(s)	1052
PsuI	RGATCY	3 cut(s)	675, 1364, 1849
PvuI	CGATCG	1 cut(s)	985
RsaI	GTAC	6 cut(s)	280, 1068, 1110, 1506, 1833, 2632
RsaNI	GTAC	6 cut(s)	279, 1067, 1109, 1505, 1832, 2631
RseI	CAYNNNNRTG	4 cut(s)	23, 1013, 1999, 2199
SacI	GAGCTC	1 cut(s)	2292
SacII	CCGCGG	1 cut(s)	136
SapI	GCTCTTC	1 cut(s)	2280
SatI	GCNGC	6 cut(s)	136, 213, 598, 2252, 2372, 2754
Sau96I	GGNCC	2 cut(s)	838, 2780
SchI	GAGTC	6 cut(s)	96, 850, 1249, 1765, 1837, 2786
ScrFI	CCNGG	4 cut(s)	265, 938, 2294, 2713
SduI	GDGCHC	3 cut(s)	1020, 1965, 2292
SfcI	CTRYAG	1 cut(s)	2638
Sfr303I	CCGCGG	1 cut(s)	136
SfuI	TTCGAA	2 cut(s)	1534, 2412
SgrBI	CCGCGG	1 cut(s)	136
SinI	GGWCC	2 cut(s)	838, 2780
SmiMI	CAYNNNNRTG	4 cut(s)	23, 1013, 1999, 2199
SmlI	CTYRAG	4 cut(s)	79, 1706, 2257, 2600
SmoI	CTYRAG	4 cut(s)	79, 1706, 2257, 2600
SpeI	ACTAGT	1 cut(s)	2770
SspI	AATATT	1 cut(s)	1320
SspMI	CTAG	5 cut(s)	1346, 1760, 1847, 2106, 2771
SstI	GAGCTC	1 cut(s)	2292
StyD4I	CCNGG	4 cut(s)	263, 936, 2292, 2711
StyI	CCWWGG	1 cut(s)	2437
TaaI	ACNGT	6 cut(s)	22, 283, 572, 1066, 2103, 2812
TaiI	ACGT	3 cut(s)	1295, 1608, 2018
TaqI	TCGA	6 cut(s)	334, 392, 981, 1534, 1641, 2412
TaqII	GACCGA	1 cut(s)	2157
TatI	WGTACW	3 cut(s)	1066, 1108, 2630
TauI	GCSGC	2 cut(s)	138, 600
TfiI	GAWTC	7 cut(s)	239, 872, 888, 1372, 2405, 2414, 2804
TscAI	CASTG	3 cut(s)	241, 1018, 1317
TseFI	GTSAC	5 cut(s)	16, 232, 1897, 2108, 2789
TseI	GCWGC	4 cut(s)	212, 2251, 2371, 2753
Tsp45I	GTSAC	5 cut(s)	16, 232, 1897, 2108, 2789
TspDTI	ATGAA	8 cut(s)	46, 336, 504, 657, 715, 801, 1572, 2856
TspGWI	ACGGA	1 cut(s)	542
TspRI	CASTG	3 cut(s)	241, 1018, 1317
Vha464I	CTTAAG	1 cut(s)	1706
VpaK11BI	GGWCC	2 cut(s)	838, 2780
VspI	ATTAAT	1 cut(s)	1485
XapI	RAATTY	4 cut(s)	942, 1468, 1636, 2459
XbaI	TCTAGA	1 cut(s)	1846
XceI	RCATGY	3 cut(s)	2134, 2198, 2687
XspI	CTAG	5 cut(s)	1346, 1760, 1847, 2106, 2771
Zsp2I	ATGCAT	2 cut(s)	1087, 2090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.