Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

13230814 .. 13233819

Gene Structure 3006 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g15200.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGGCTGAGGCTGTAGTTTCGATGGTGATCGAAGGGCTCAAGCCGCTAGGAAACTTCATGATTCAGCAAGCTAACTTCCTGACCGAAGTTAACCATCAAGTTGAGCTTGCACAAAGAGAGCTACTCCTGATGCGAAGCTTTCTGAAAGATGCAGATGCACGACAAGAAGATGATGAAGTGGTGCGCTCTTGGGTTAATGAGGTTAGAGAAGCTGCTTATGATTTGGAGGATGTTATTGAAGCTTTTGTCTTGAAAGTGGCTATCAGGAGGGGAGGCAGTATGATGATCGTTCTCAAAAGGTTTGCTTGCATCTGGAATGAAGGAGTTCATCGTTACAAGATCGGATCAGAAATTGAGAGCATCACAACCAAGCTTTCTAAACTGAGGTTGACTATGCAAAGTTATGACATCAAGCAAACGAAGGGGAGTGAAGGAGCCAATTCTTTTGCGAGCCAACAAGAACGCACACTAACCTATTCTCATGTTAGTGATGATCATGATGTTGTTGGGTTAGGAGACGACATAGAGAAGTTGGCCACACGTTTGGTAGAAGAGGGAGGTTGCCGAATTGTTTCCATTTGGGGTATGGGGGGCTTGGGGAAGACCACTCCTGCAAAGAAGGTTTATGGTCACAAGAAAGTCCAGTGCCATTTCGATTGCTTTGCTTGGCGGCTCTGCGATTTCCAACGAGAGAAGAAGTGTCTGGTGGTGCTTGATGACATATGGACAGTTGAAGTGTGGGACTCTTTGAAGGGTGGATTTCCAGCGCATGATCAGGAAACTAATAGCCGAATCATTCTCACAACTCGAAACCAAGAATTGGCTTCAATTGCAAAGGAAAATGCCTACCAATCGCATGCACTGAGCGAGGATGATGCCTGGAACTTGTTTCGGAAGATAGCATTCTCCCAAATGGATGAGACAGACTCTCAAATCAAATCAAAGAAAGAGCTAGGAGAGAAGATGCTTCGCCATTGTGCAGGTTTACCACTAGCGATTATTGTGCTTGCAGGACTGCTATCTAAGAAAGACACAGTCAATGCGTGGGAAACTGTGTGTGAGAATGTCAATGTGTATATAAGAAGAGGCACAGATCTTGATCGAGAATACAAAGGTCAAAAATATGGAGACTATGAGATACCAGTGAAACTGTTGACTCATTTATGGATGGCAGAAGGGTTTATATCTGAGACATCATCGGAAATATTGGAAGATGTATCATATAGCTGTTTAAGTGAGTTGGTGCAAAGGTGCATTGTTCAAGTTGGACAGATTGGTTCAACTGGGAAGATTAAATCATGTCACCTCCATGATCTCATGAGAGACTTGTGCATGTTAAAGGCCAAGGAAGAGAACTTTTCCCATGTTGTCAATTTTTCTACTGGGACGAGAACCAACGCAACACAAGTCGGTAGAGTTCGAAGACTGGCAATCTATGTGGACAGATACTATGATAATTTAGTTCCCACTACCAGAGACGGTCACCTCAGATGTGTTCAGGAAGATGGAACAATTGAGGCATTTATATCTACCCCCGTGGCACACAGTAGACGGGAAGCTGTCATTGGGAAACTAAACATCCAAGGTTTGTCAAAATATCTGGAACAGCTGGAGGAAATCTTGAAATCCAGAAGTGGTCCAACATTCCACCATCTTCGTTCTCTATCTCTGGACATGGATGGTCATAACTGTGATATACTATCAAGGTTTCGACTTATATGCAAGCTGCAAGTGAGGGGTGGAATCGTGAAGTTACCAGAAGAGCTCTTGTCCTTTCCAAACCTCATCAAGATAAAGTTGGCTAGCACTAAACTGAAGGAAGAAGACCAGACAGAAATACTAGAGAAGCTGCCACACTTGAGAGTGCTTTACCTACAAGGTCATGTTTTCTCGAGCCTTCCTTCAGACACACTTGTTTGCACGAACGGAGGATTTCCCAATCTGGAATTTCTTTACCTTGAAGGGTTGCCAGAATTGAAAGAGTGGAGGTTGGAGAAAGGAGCCATGCCTCGTCTCCGCAGACTGTGCATTGATCACTGCACAGAATTGAAGGCAGTTCCGGATGGGCTTCAGTATATTAAGACCCTCAAGGAGTTGACTGTCACGTGGATGCCAAGTGAATTCTGTAGTACGCTCGGAAAAGAAGGGGAGGATTTCGAAGGGGACGTCTGCTGTGTACGCAGTGCTTCGAGTACTGCGGCTGTCTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

737

Amino Acids

83.31

Weight (kDa)

6.08

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	13 - 90	2e-21	Rx N-terminal domain
NB-ARC	PF00931	173 - 223	2e-10	NB-ARC domain
NB-ARC	PF00931	225 - 305	1e-16	NB-ARC domain
WHD_DRP	PF23559	377 - 444	2.6e-17	Disease resistance protein Winged helix domain
LRR_14	PF23598	549 - 703	4.6e-11	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2169
Acc36I	ACCTGC	1 cut(s)	971
AccB7I	CCANNNNNTGG	1 cut(s)	820
AccI	GTMKAC	1 cut(s)	1549
AccIII	TCCGGA	1 cut(s)	2059
AciI	CCGC	4 cut(s)	44, 670, 2017, 2198
AclWI	GGATC	1 cut(s)	352
AcoI	YGGCCR	1 cut(s)	534
AcsI	RAATTY	2 cut(s)	1946, 2120
AcuI	CTGAAG	3 cut(s)	1835, 1887, 2054
AcvI	CACGTG	1 cut(s)	2106
AcyI	GRCGYC	1 cut(s)	2166
AfaI	GTAC	3 cut(s)	2131, 2178, 2194
AfiI	CCNNNNNNNGG	1 cut(s)	820
AflIII	ACRYGT	1 cut(s)	539
AjnI	CCWGG	1 cut(s)	878
AjuI	GAANNNNNNNTTGG	2 cut(s)	1548, 1580
Alw21I	GWGCWC	1 cut(s)	1767
Alw26I	GTCTC	7 cut(s)	510, 914, 1122, 1184, 1317, 1470, 2018
AlwI	GGATC	1 cut(s)	352
Ama87I	CYCGRG	1 cut(s)	1891
Aor13HI	TCCGGA	1 cut(s)	2059
AoxI	GGCC	2 cut(s)	534, 1341
ApeKI	GCWGC	3 cut(s)	212, 1726, 1849
ApoI	RAATTY	2 cut(s)	1946, 2120
ArsI	GACNNNNNNTTYG	2 cut(s)	2151, 2183
Asp700I	GAANNNNTTC	2 cut(s)	324, 571
AspLEI	GCGC	2 cut(s)	186, 769
AspS9I	GGNCC	1 cut(s)	1637
AsuHPI	GGTGA	3 cut(s)	37, 1295, 1475
AsuII	TTCGAA	2 cut(s)	1420, 2157
AsuNHI	GCTAGC	1 cut(s)	1802
AvaI	CYCGRG	1 cut(s)	1891
AvaII	GGWCC	1 cut(s)	1637
BalI	TGGCCA	1 cut(s)	536
BanII	GRGCYC	2 cut(s)	39, 1767
BbrPI	CACGTG	1 cut(s)	2106
BbsI	GAAGAC	3 cut(s)	608, 1429, 1830
Bbv12I	GWGCWC	1 cut(s)	1767
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	3 cut(s)	199, 1713, 1836
BccI	CCATC	7 cut(s)	16, 102, 1162, 1499, 1659, 1673, 2057
BcgI	CGANNNNNNTGC	8 cut(s)	644, 678, 857, 891, 985, 1019, 1701, 1735
BciT130I	CCWGG	1 cut(s)	880
BclI	TGATCA	3 cut(s)	493, 772, 2032
BcoDI	GTCTC	7 cut(s)	510, 914, 1122, 1184, 1317, 1470, 2018
BfaI	CTAG	5 cut(s)	47, 953, 992, 1803, 1841
BfmI	CTRYAG	2 cut(s)	12, 2125
BfuAI	ACCTGC	1 cut(s)	971
BglII	AGATCT	1 cut(s)	1093
BisI	GCNGC	6 cut(s)	44, 213, 671, 1727, 1850, 2199
BlsI	GCNGC	6 cut(s)	45, 214, 672, 1728, 1851, 2200
BmcAI	AGTACT	1 cut(s)	2194
Bme1390I	CCNGG	1 cut(s)	880
Bme18I	GGWCC	1 cut(s)	1637
BmeT110I	CYCGRG	1 cut(s)	1891
BmgT120I	GGNCC	1 cut(s)	1637
BmiI	GGNNCC	2 cut(s)	436, 2002
BmrFI	CCNGG	1 cut(s)	880
BmrI	ACTGGG	2 cut(s)	1293, 1392
BmsI	GCATC	8 cut(s)	120, 139, 145, 318, 369, 865, 954, 2100
BmtI	GCTAGC	1 cut(s)	1806
BmuI	ACTGGG	2 cut(s)	1293, 1392
BpiI	GAAGAC	3 cut(s)	608, 1429, 1830
BplI	GAGNNNNNCTC	4 cut(s)	108, 140, 911, 943
BpmI	CTGGAG	1 cut(s)	1631
Bpu10I	CCTNAGC	1 cut(s)	6
Bpu14I	TTCGAA	2 cut(s)	1420, 2157
BpuEI	CTTGAG	3 cut(s)	23, 1879, 2072
BsaAI	YACGTR	1 cut(s)	2106
BsaBI	GATNNNNATC	2 cut(s)	26, 1098
BsaHI	GRCGYC	1 cut(s)	2166
BsaJI	CCNNGG	3 cut(s)	1344, 1536, 1582
BsaWI	WCCGGW	1 cut(s)	2059
Bsc4I	CCNNNNNNNGG	1 cut(s)	820
Bse1I	ACTGG	5 cut(s)	643, 1142, 1288, 1387, 1431
Bse8I	GATNNNNATC	2 cut(s)	26, 1098
BseAI	TCCGGA	1 cut(s)	2059
BseBI	CCWGG	1 cut(s)	880
BseDI	CCNNGG	3 cut(s)	1344, 1536, 1582
BseGI	GGATG	8 cut(s)	235, 877, 922, 1173, 1578, 1684, 2068, 2115
BseJI	GATNNNNATC	2 cut(s)	26, 1098
BseLI	CCNNNNNNNGG	1 cut(s)	820
BseMII	CTCAG	4 cut(s)	374, 854, 1179, 1501
BseNI	ACTGG	5 cut(s)	643, 1142, 1288, 1387, 1431
BseXI	GCAGC	3 cut(s)	199, 1713, 1836
BsgI	GTGCAG	2 cut(s)	999, 2023
BshFI	GGCC	2 cut(s)	536, 1343
BsiHKAI	GWGCWC	1 cut(s)	1767
BsiHKCI	CYCGRG	1 cut(s)	1891
BsiSI	CCGG	1 cut(s)	2060
BslFI	GGGAC	3 cut(s)	755, 1399, 2177
BslI	CCNNNNNNNGG	1 cut(s)	820
BsmAI	GTCTC	7 cut(s)	510, 914, 1122, 1184, 1317, 1470, 2018
BsmBI	CGTCTC	3 cut(s)	510, 1470, 2018
BsmFI	GGGAC	3 cut(s)	755, 1399, 2177
BsmI	GAATGC	1 cut(s)	902
BsnI	GGCC	2 cut(s)	536, 1343
BsoBI	CYCGRG	1 cut(s)	1891
Bsp119I	TTCGAA	2 cut(s)	1420, 2157
Bsp1286I	GDGCHC	2 cut(s)	39, 1767
Bsp13I	TCCGGA	1 cut(s)	2059
BspACI	CCGC	4 cut(s)	44, 670, 2017, 2198
BspANI	GGCC	2 cut(s)	536, 1343
BspCNI	CTCAG	4 cut(s)	375, 855, 1180, 1500
BspEI	TCCGGA	1 cut(s)	2059
BspHI	TCATGA	3 cut(s)	57, 496, 1317
BspLI	GGNNCC	2 cut(s)	436, 2002
BspMI	ACCTGC	1 cut(s)	971
BspOI	GCTAGC	1 cut(s)	1806
BspPI	GGATC	1 cut(s)	352
BspQI	GCTCTTC	1 cut(s)	1755
BspT104I	TTCGAA	2 cut(s)	1420, 2157
BsrI	ACTGG	5 cut(s)	643, 1142, 1288, 1387, 1431
BssECI	CCNNGG	3 cut(s)	1344, 1536, 1582
BssNI	GRCGYC	1 cut(s)	2166
BssT1I	CCWWGG	2 cut(s)	1344, 1582
Bst2UI	CCWGG	1 cut(s)	880
Bst4CI	ACNGT	9 cut(s)	730, 1036, 1054, 1152, 1481, 1547, 1691, 2025, 2101
Bst6I	CTCTTC	4 cut(s)	546, 1078, 1344, 1755
BstACI	GRCGYC	1 cut(s)	2166
BstAPI	GCANNNNNTGC	1 cut(s)	2025
BstBAI	YACGTR	1 cut(s)	2106
BstBI	TTCGAA	2 cut(s)	1420, 2157
BstC8I	GCNNGC	8 cut(s)	69, 108, 307, 451, 858, 1008, 1724, 1804
BstDEI	CTNAG	6 cut(s)	6, 383, 863, 1023, 1188, 1487
BstDSI	CCRYGG	1 cut(s)	1536
BstEII	GGTNACC	1 cut(s)	1481
BstF5I	GGATG	8 cut(s)	235, 877, 922, 1173, 1578, 1684, 2068, 2115
BstHHI	GCGC	2 cut(s)	186, 769
BstMAI	GTCTC	7 cut(s)	510, 914, 1122, 1184, 1317, 1470, 2018
BstMWI	GCNNNNNNNGC	4 cut(s)	43, 830, 2025, 2178
BstNI	CCWGG	1 cut(s)	880
BstNSI	RCATGY	2 cut(s)	860, 1336
BstPI	GGTNACC	1 cut(s)	1481
BstSCI	CCNGG	1 cut(s)	878
BstSFI	CTRYAG	2 cut(s)	12, 2125
BstV1I	GCAGC	3 cut(s)	199, 1713, 1836
BstV2I	GAAGAC	3 cut(s)	608, 1429, 1830
BstX2I	RGATCY	1 cut(s)	1093
BstXI	CCANNNNNNTGG	1 cut(s)	544
BstYI	RGATCY	1 cut(s)	1093
BsuRI	GGCC	2 cut(s)	536, 1343
BtgI	CCRYGG	1 cut(s)	1536
BtsCI	GGATG	8 cut(s)	235, 877, 922, 1173, 1578, 1684, 2068, 2115
BtsI	GCAGTG	2 cut(s)	2035, 2188
BtsIMutI	CAGTG	5 cut(s)	650, 860, 1149, 2035, 2188
BveI	ACCTGC	1 cut(s)	971
Cac8I	GCNNGC	8 cut(s)	69, 108, 307, 451, 858, 1008, 1724, 1804
CciI	TCATGA	3 cut(s)	57, 496, 1317
CfoI	GCGC	2 cut(s)	186, 769
Cfr13I	GGNCC	1 cut(s)	1637
Csp6I	GTAC	3 cut(s)	2130, 2177, 2193
CspCI	CAANNNNNGTGG	2 cut(s)	1419, 1454
CviQI	GTAC	3 cut(s)	2130, 2177, 2193
DdeI	CTNAG	6 cut(s)	6, 383, 863, 1023, 1188, 1487
EaeI	YGGCCR	1 cut(s)	534
Eam1104I	CTCTTC	4 cut(s)	546, 1078, 1344, 1755
EarI	CTCTTC	4 cut(s)	546, 1078, 1344, 1755
Ecl136II	GAGCTC	1 cut(s)	1765
Eco130I	CCWWGG	2 cut(s)	1344, 1582
Eco24I	GRGCYC	2 cut(s)	39, 1767
Eco47I	GGWCC	1 cut(s)	1637
Eco53kI	GAGCTC	1 cut(s)	1765
Eco57I	CTGAAG	3 cut(s)	1835, 1887, 2054
Eco72I	CACGTG	1 cut(s)	2106
Eco88I	CYCGRG	1 cut(s)	1891
Eco91I	GGTNACC	1 cut(s)	1481
EcoICRI	GAGCTC	1 cut(s)	1765
EcoO65I	GGTNACC	1 cut(s)	1481
EcoRI	GAATTC	1 cut(s)	2120
EcoRII	CCWGG	1 cut(s)	878
EcoT14I	CCWWGG	2 cut(s)	1344, 1582
EcoT38I	GRGCYC	2 cut(s)	39, 1767
ErhI	CCWWGG	2 cut(s)	1344, 1582
Esp3I	CGTCTC	3 cut(s)	510, 1470, 2018
FalI	AAGNNNNNCTT	4 cut(s)	90, 122, 289, 321
FaqI	GGGAC	3 cut(s)	755, 1399, 2177
FauNDI	CATATG	1 cut(s)	722
FbaI	TGATCA	3 cut(s)	493, 772, 2032
FblI	GTMKAC	1 cut(s)	1549
Fnu4HI	GCNGC	6 cut(s)	44, 213, 671, 1727, 1850, 2199
FokI	GGATG	8 cut(s)	242, 884, 929, 1180, 1565, 1691, 2075, 2122
FriOI	GRGCYC	2 cut(s)	39, 1767
Fsp4HI	GCNGC	6 cut(s)	44, 213, 671, 1727, 1850, 2199
FspBI	CTAG	5 cut(s)	47, 953, 992, 1803, 1841
GlaI	GCGC	2 cut(s)	185, 768
GluI	GCNGC	6 cut(s)	44, 213, 671, 1727, 1850, 2199
GsuI	CTGGAG	1 cut(s)	1631
HaeIII	GGCC	2 cut(s)	536, 1343
HapII	CCGG	1 cut(s)	2060
HhaI	GCGC	2 cut(s)	186, 769
Hin1I	GRCGYC	1 cut(s)	2166
Hin6I	GCGC	2 cut(s)	184, 767
HinP1I	GCGC	2 cut(s)	184, 767
HincII	GTYRAC	4 cut(s)	91, 390, 1155, 2097
HindII	GTYRAC	4 cut(s)	91, 390, 1155, 2097
HindIII	AAGCTT	3 cut(s)	136, 240, 371
HinfI	GANTC	6 cut(s)	61, 743, 792, 926, 1156, 1743
HpaI	GTTAAC	1 cut(s)	91
HpaII	CCGG	1 cut(s)	2060
HphI	GGTGA	3 cut(s)	37, 1295, 1475
Hpy166II	GTNNAC	8 cut(s)	91, 390, 986, 1155, 1441, 1550, 2097, 2177
Hpy188I	TCNGA	9 cut(s)	144, 344, 349, 894, 1189, 1201, 1490, 1906, 2138
Hpy8I	GTNNAC	8 cut(s)	91, 390, 986, 1155, 1441, 1550, 2097, 2177
HpyCH4III	ACNGT	9 cut(s)	730, 1036, 1054, 1152, 1481, 1547, 1691, 2025, 2101
HpyCH4IV	ACGT	3 cut(s)	541, 2105, 2166
HpyF10VI	GCNNNNNNNGC	4 cut(s)	43, 830, 2025, 2178
HpyF3I	CTNAG	6 cut(s)	6, 383, 863, 1023, 1188, 1487
HpySE526I	ACGT	3 cut(s)	541, 2105, 2166
Hsp92I	GRCGYC	1 cut(s)	2166
HspAI	GCGC	2 cut(s)	184, 767
Kpn2I	TCCGGA	1 cut(s)	2059
Ksp22I	TGATCA	3 cut(s)	493, 772, 2032
KspAI	GTTAAC	1 cut(s)	91
LguI	GCTCTTC	1 cut(s)	1755
LmnI	GCTCC	2 cut(s)	434, 2000
Lsp1109I	GCAGC	3 cut(s)	199, 1713, 1836
LweI	GCATC	8 cut(s)	120, 139, 145, 318, 369, 865, 954, 2100
MaeI	CTAG	5 cut(s)	47, 953, 992, 1803, 1841
MaeII	ACGT	3 cut(s)	541, 2105, 2166
MaeIII	GTNAC	6 cut(s)	332, 629, 1301, 1481, 1752, 2101
MfeI	CAATTG	2 cut(s)	828, 1512
MflI	RGATCY	1 cut(s)	1093
MhlI	GDGCHC	2 cut(s)	39, 1767
MlsI	TGGCCA	1 cut(s)	536
MluNI	TGGCCA	1 cut(s)	536
MlyI	GAGTC	3 cut(s)	737, 920, 1150
MmeI	TCCRAC	4 cut(s)	709, 1246, 1664, 1971
Mox20I	TGGCCA	1 cut(s)	536
MroI	TCCGGA	1 cut(s)	2059
MroXI	GAANNNNTTC	2 cut(s)	324, 571
MscI	TGGCCA	1 cut(s)	536
MseI	TTAA	6 cut(s)	90, 195, 1232, 1293, 1337, 2079
MslI	CAYNNNNRTG	4 cut(s)	486, 1308, 1689, 2108
Msp20I	TGGCCA	1 cut(s)	536
MspA1I	CMGCKG	1 cut(s)	1609
MspI	CCGG	1 cut(s)	2060
MspR9I	CCNGG	1 cut(s)	880
MunI	CAATTG	2 cut(s)	828, 1512
Mva1269I	GAATGC	1 cut(s)	902
MvaI	CCWGG	1 cut(s)	880
MwoI	GCNNNNNNNGC	4 cut(s)	43, 830, 2025, 2178
NdeI	CATATG	1 cut(s)	722
NheI	GCTAGC	1 cut(s)	1802
NlaIV	GGNNCC	2 cut(s)	436, 2002
NmuCI	GTSAC	4 cut(s)	629, 1301, 1481, 2101
NspI	RCATGY	2 cut(s)	860, 1336
NspV	TTCGAA	2 cut(s)	1420, 2157
PaeI	GCATGC	1 cut(s)	860
PaeR7I	CTCGAG	1 cut(s)	1891
PagI	TCATGA	3 cut(s)	57, 496, 1317
PciSI	GCTCTTC	1 cut(s)	1755
PcsI	WCGNNNNNNNCGW	1 cut(s)	2163
PctI	GAATGC	1 cut(s)	902
PdmI	GAANNNNTTC	2 cut(s)	324, 571
PfeI	GAWTC	3 cut(s)	61, 792, 1743
PflFI	GACNNNGTC	1 cut(s)	1034
PflMI	CCANNNNNTGG	1 cut(s)	820
PkrI	GCNGC	6 cut(s)	45, 214, 672, 1728, 1851, 2200
PleI	GAGTC	3 cut(s)	737, 920, 1150
PmaCI	CACGTG	1 cut(s)	2106
PmlI	CACGTG	1 cut(s)	2106
PpsI	GAGTC	3 cut(s)	737, 920, 1150
Ppu21I	YACGTR	1 cut(s)	2106
Psp124BI	GAGCTC	1 cut(s)	1767
Psp6I	CCWGG	1 cut(s)	878
PspCI	CACGTG	1 cut(s)	2106
PspEI	GGTNACC	1 cut(s)	1481
PspGI	CCWGG	1 cut(s)	878
PspN4I	GGNNCC	2 cut(s)	436, 2002
PspPI	GGNCC	1 cut(s)	1637
PsuI	RGATCY	1 cut(s)	1093
PsyI	GACNNNGTC	1 cut(s)	1034
PvuII	CAGCTG	1 cut(s)	1609
RsaI	GTAC	3 cut(s)	2131, 2178, 2194
RsaNI	GTAC	3 cut(s)	2130, 2177, 2193
RseI	CAYNNNNRTG	4 cut(s)	486, 1308, 1689, 2108
SacI	GAGCTC	1 cut(s)	1767
SapI	GCTCTTC	1 cut(s)	1755
SaqAI	TTAA	6 cut(s)	90, 195, 1232, 1293, 1337, 2079
SatI	GCNGC	6 cut(s)	44, 213, 671, 1727, 1850, 2199
Sau96I	GGNCC	1 cut(s)	1637
ScaI	AGTACT	1 cut(s)	2194
SchI	GAGTC	3 cut(s)	737, 920, 1150
ScrFI	CCNGG	1 cut(s)	880
SduI	GDGCHC	2 cut(s)	39, 1767
SfaNI	GCATC	8 cut(s)	120, 139, 145, 318, 369, 865, 954, 2100
SfcI	CTRYAG	2 cut(s)	12, 2125
Sfr274I	CTCGAG	1 cut(s)	1891
SfuI	TTCGAA	2 cut(s)	1420, 2157
SinI	GGWCC	1 cut(s)	1637
SlaI	CTCGAG	1 cut(s)	1891
SmiMI	CAYNNNNRTG	4 cut(s)	486, 1308, 1689, 2108
SmlI	CTYRAG	4 cut(s)	38, 1858, 1891, 2087
SmoI	CTYRAG	4 cut(s)	38, 1858, 1891, 2087
SphI	GCATGC	1 cut(s)	860
SsiI	CCGC	4 cut(s)	44, 670, 2017, 2198
SspI	AATATT	1 cut(s)	1206
SspMI	CTAG	5 cut(s)	47, 953, 992, 1803, 1841
SstI	GAGCTC	1 cut(s)	1767
StyD4I	CCNGG	1 cut(s)	878
StyI	CCWWGG	2 cut(s)	1344, 1582
TaaI	ACNGT	9 cut(s)	730, 1036, 1054, 1152, 1481, 1547, 1691, 2025, 2101
TaiI	ACGT	3 cut(s)	544, 2108, 2169
TaqII	GACCGA	1 cut(s)	98
TatI	WGTACW	1 cut(s)	2192
TauI	GCSGC	3 cut(s)	46, 673, 2201
TfiI	GAWTC	3 cut(s)	61, 792, 1743
Tru1I	TTAA	6 cut(s)	90, 195, 1232, 1293, 1337, 2079
Tru9I	TTAA	6 cut(s)	90, 195, 1232, 1293, 1337, 2079
TscAI	CASTG	5 cut(s)	650, 867, 1149, 2042, 2188
TseFI	GTSAC	4 cut(s)	629, 1301, 1481, 2101
TseI	GCWGC	3 cut(s)	212, 1726, 1849
Tsp45I	GTSAC	4 cut(s)	629, 1301, 1481, 2101
TspDTI	ATGAA	4 cut(s)	46, 189, 317, 333
TspGWI	ACGGA	1 cut(s)	1941
TspRI	CASTG	5 cut(s)	650, 867, 1149, 2042, 2188
Tth111I	GACNNNGTC	1 cut(s)	1034
Van91I	CCANNNNNTGG	1 cut(s)	820
VpaK11BI	GGWCC	1 cut(s)	1637
XapI	RAATTY	2 cut(s)	1946, 2120
XceI	RCATGY	2 cut(s)	860, 1336
XcmI	CCANNNNNNNNNTGG	1 cut(s)	583
XhoI	CTCGAG	1 cut(s)	1891
XmiI	GTMKAC	1 cut(s)	1549
XmnI	GAANNNNTTC	2 cut(s)	324, 571
XspI	CTAG	5 cut(s)	47, 953, 992, 1803, 1841
ZraI	GACGTC	1 cut(s)	2167
ZrmI	AGTACT	1 cut(s)	2194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.