Rorug01G0257100

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
36701644 .. 36706629
4986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0257100.1

Sequence Viewer

Length: 2244 bp
ATGGGGAGCAAGAGACTCAGCTTCCATTCCCTTATTCTTCTTTTCCATATGATCCTAATAGACCTTGTTTGTGTCAAGGGAGATGAGCAACACCAAAAGGAGTTTTACGTTGTATATTTGGGGGATCACCCTGCTGATCATGAAGACTCTGCAGCCCAAACACATATGAATGTCCTCTCATCTGTAACAGGAAGCTATTCTGGTGCTACAGAGTCCATGGTTTATAGCTATACCAAGAGCTTCAATGCATTTGCTGCTAAGCTTTCCAGTGACGAAGCCGAAAAGCTATCAAGAATGGATCAAGTTCTCTCTGTGACTCCAAATAGGTATCACAAGCTGCACACAACAAGGTCATGGAACTTCATTGGGTTACCATTAAAAGCTAAAAGAGATTTAAAAAGTGAAAGTGACATTATAGTTGGTCTCTTTGATACAGGAATTACTCCAGAGTCCCAAAGCTTTAAGGATGAAGGCTTTAGTCCTCCACCAGCAAAATGGAAAGGAACTTGTGGCCAGTTTGCTAATTTCTCAGGATGCAACAACAAAATCATAGGAGCTAGATACTTCAAGCTTGATGGCACTCCAGACCCAGCTGACATCTTATCTCCAGTGGATGTGGATGGACATGGGACTCACACATCATCGACCTTAGCTGGCAACCTAGTGCCGAATGCCAACCTCTCTGGCCTTGCTAAGGGCACTGCACGAGGGGCAGTGCCATCAGCTAGGGTGTCCATGTACAAAGTATGTTGGGCTAGTTTCGGCTGCTCTGACATGGACATTCTTGCTGCGTATGAAGCTGCCATACACGATGGCGTGGATGTCATATCGATTTCCATTGGTGGAGGGGGAGCCTCTTATACTTTGGATAGTATAGCAGTTGGTGCATTTCATGCCATGAAGAATGGTATTATTACAGTGGCCTCAGCTGGAAATGATGGGCCAAGTTTGGGGAGTATTGTCAACCATGCACCATGGTTGGTAACTGTGGCAGCTAGTGGCATTGATAGGCAGTTCATTAGCAAAGTTCATTTGGGCAATGGGAAGAATTTTGAAGGGATTGGAGTGAGCACATTTAATCCAAATAAGACGTTGTACCCTCTTGTTAGTGGGGCTGATGTAGCACAAAGCTCGGAAAGCAAAGAAAATGCAAGGTTCTGTGTTGAGGACTCATTAGACCCTAAAAAAGTAGAGGGAAAGATTGTTTTCTGCCAATTTAGATCTTGGGGTACAGATTCTGTCATTAAAGGAAATGGAGGAGTTGGTACCATTGTTGAAAATGATCAATTTCTCGATGCTGCTCAAATATTCATGGCACCGGGAACCATGGTTAACTCTACAATTGGCGAAAGCATTGATGCCTATATACATTCAGAAAGATCACCATCAGCAGTTATATTCAAGTCACAAGAAGCACAAAAACGTGCTCCATATGTTGCTTCATTTTCATCCAGGGGTCCAAATCCAGGATCAGAACACATTCTCAAGCCTGATATTGCAGCACCTGGGATTGACATTTTGGCATCTTACACTCCATTGAAGTCACTTACTGGGTTGGATGGCGACACACAATACTCAGAATTCACACTCATGTCTGGAACTTCAATGGCATGCCCACATGTTGCTGGTGTAGCAGCATATGTTAAGTCATTTCACCCGAATTGGTCTCAAGCTGCAATAAGATCTGCCATCATGACCACAGCAACACCGATGAGCCATAGAGTGAACACAGAAGCAGAATTCGCCTATGGTGCTGGTCAAGTGAACCCGAGAAAAGCTGTGAATCCAGGCTTAATCTATGACATGGATGAAATGTCATACATTCAGTTCCTATGCCATGAAGGCTATAGTGGCTCCTCATTAGCCCCTTTAGTTGGCTCAAAGTCCATAAACTGCTCCTCGTTGATTCCTGGACTCGGCTACGATGCTCTCAACTATCCCACCATCCAGCTCAGCTTGAAAAGCAGCAAGCAACCGACAGTAGCTGTTTTCAGAAGAATTGTCACTAATGTTGGTCCTGCTAGTTCCACATACAATGCCACCATCAGAGCACCAAAGGGAGTGGAAATCACTGTCAAACCCATGAGTCTGACTTTCTCTCATGCTTTGCAAAAGAGGAGCTTCCAAGTTGTGGTGAAGGCGAATCCGATGGACAGTATGCAAATGGTGTCTGGCTCGCTCGGATGGAAAAGCTCTAGGTACACTGTGAGGAGTCCCATTGTGGTTTACAGTCCAGGAAATTAA

Protein Analysis

747

Amino Acids

79.86

Weight (kDa)

7.06

Isoelectric Point (pI)

31.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I9 PF05922 36 - 114 1.1e-17 Peptidase inhibitor I9
Peptidase_S8 PF00082 136 - 586 2.5e-46 Subtilase family
fn3_6 PF17766 644 - 742 1.2e-27 Fibronectin type-III domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1265
AccB1I GGYRCC 2 cut(s) 1265, 1315
AccB7I CCANNNNNTGG 1 cut(s) 2131
AclWI GGATC 4 cut(s) 46, 132, 306, 1477
AcoI YGGCCR 1 cut(s) 511
AcsI RAATTY 3 cut(s) 1048, 1580, 1739
AfaI GTAC 5 cut(s) 740, 1097, 1231, 1267, 2201
AfiI CCNNNNNNNGG 6 cut(s) 694, 950, 1466, 1874, 1916, 2131
AflIII ACRYGT 1 cut(s) 1618
AgsI TTSAA 8 cut(s) 244, 568, 1055, 1277, 1402, 1540, 1605, 1960
AjnI CCWGG 6 cut(s) 1451, 1465, 1504, 1786, 1909, 2233
Alw21I GWGCWC 3 cut(s) 1073, 1429, 2053
Alw26I GTCTC 3 cut(s) 7, 428, 1671
AlwI GGATC 4 cut(s) 46, 132, 306, 1477
AlwNI CAGNNNCTG 3 cut(s) 1238, 1505, 1985
Ama87I CYCGRG 1 cut(s) 1768
AoxI GGCC 4 cut(s) 511, 685, 921, 941
ApoI RAATTY 3 cut(s) 1048, 1580, 1739
Asp700I GAANNNNTTC 2 cut(s) 196, 1479
Asp718I GGTACC 1 cut(s) 1265
AspS9I GGNCC 3 cut(s) 941, 1457, 2015
AsuC2I CCSGG 1 cut(s) 1320
AsuHPI GGTGA 4 cut(s) 119, 1374, 1646, 2146
AvaI CYCGRG 1 cut(s) 1768
AvaII GGWCC 2 cut(s) 1457, 2015
BaeGI GKGCMC 1 cut(s) 701
BaeI ACNNNNGTAYC 2 cut(s) 1257, 1290
BalI TGGCCA 1 cut(s) 513
BanI GGYRCC 2 cut(s) 1265, 1315
BarI GAAGNNNNNNTAC 2 cut(s) 789, 821
BauI CACGAG 1 cut(s) 705
BbsI GAAGAC 1 cut(s) 150
Bbv12I GWGCWC 3 cut(s) 1073, 1429, 2053
BbvCI CCTCAGC 1 cut(s) 925
BcgI CGANNNNNNTGC 2 cut(s) 1113, 1147
BciT130I CCWGG 6 cut(s) 1453, 1467, 1506, 1788, 1911, 2235
BclI TGATCA 2 cut(s) 136, 1282
BcnI CCSGG 1 cut(s) 1320
BcoDI GTCTC 3 cut(s) 7, 428, 1671
BfaI CTAG 7 cut(s) 558, 662, 726, 756, 996, 2022, 2196
BfmI CTRYAG 3 cut(s) 150, 207, 1846
BglI GCCNNNNNGGC 1 cut(s) 1842
BglII AGATCT 2 cut(s) 1220, 1682
BlpI GCTNAGC 2 cut(s) 258, 1952
Bme1390I CCNGG 7 cut(s) 1320, 1453, 1467, 1506, 1788, 1911, 2235
Bme18I GGWCC 2 cut(s) 1457, 2015
BmeT110I CYCGRG 1 cut(s) 1768
BmgT120I GGNCC 3 cut(s) 941, 1457, 2015
BmiI GGNNCC 6 cut(s) 853, 1267, 1317, 1324, 1458, 1855
BmrFI CCNGG 7 cut(s) 1320, 1453, 1467, 1506, 1788, 1911, 2235
BmrI ACTGGG 1 cut(s) 1560
BmsI GCATC 5 cut(s) 524, 1285, 1348, 1532, 1915
BmuI ACTGGG 1 cut(s) 1560
BpiI GAAGAC 1 cut(s) 150
BpmI CTGGAG 3 cut(s) 429, 567, 591
Bpu10I CCTNAGC 3 cut(s) 649, 693, 925
Bpu1102I GCTNAGC 2 cut(s) 258, 1952
BpuEI CTTGAG 2 cut(s) 1469, 1653
BpuMI CCSGG 1 cut(s) 1320
Bsa29I ATCGAT 1 cut(s) 830
BsaBI GATNNNNATC 1 cut(s) 1384
BsaI GGTCTC 2 cut(s) 428, 1671
BsaJI CCNNGG 5 cut(s) 216, 974, 1326, 1452, 1505
Bsc4I CCNNNNNNNGG 6 cut(s) 694, 950, 1466, 1874, 1916, 2131
Bse1I ACTGG 4 cut(s) 267, 514, 608, 1555
Bse3DI GCAATG 1 cut(s) 1045
Bse8I GATNNNNATC 1 cut(s) 1384
BseBI CCWGG 6 cut(s) 1453, 1467, 1506, 1788, 1911, 2235
BseCI ATCGAT 1 cut(s) 830
BseDI CCNNGG 5 cut(s) 216, 974, 1326, 1452, 1505
BseJI GATNNNNATC 1 cut(s) 1384
BseLI CCNNNNNNNGG 6 cut(s) 694, 950, 1466, 1874, 1916, 2131
BseMI GCAATG 1 cut(s) 1045
BseMII CTCAG 5 cut(s) 31, 543, 939, 1590, 1966
BseNI ACTGG 4 cut(s) 267, 514, 608, 1555
BseRI GAGGAG 5 cut(s) 1272, 1846, 1888, 2131, 2224
BseSI GKGCMC 1 cut(s) 701
BseYI CCCAGC 1 cut(s) 589
BsgI GTGCAG 2 cut(s) 323, 687
BshFI GGCC 4 cut(s) 513, 687, 923, 943
BshNI GGYRCC 2 cut(s) 1265, 1315
BshVI ATCGAT 1 cut(s) 830
BsiHKAI GWGCWC 3 cut(s) 1073, 1429, 2053
BsiHKCI CYCGRG 1 cut(s) 1768
BsiSI CCGG 1 cut(s) 1319
BslFI GGGAC 3 cut(s) 436, 643, 2199
BslI CCNNNNNNNGG 6 cut(s) 694, 950, 1466, 1874, 1916, 2131
BsmAI GTCTC 3 cut(s) 7, 428, 1671
BsmFI GGGAC 3 cut(s) 436, 643, 2199
BsmI GAATGC 1 cut(s) 676
BsnI GGCC 4 cut(s) 513, 687, 923, 943
Bso31I GGTCTC 2 cut(s) 428, 1671
BsoBI CYCGRG 1 cut(s) 1768
Bsp1286I GDGCHC 4 cut(s) 701, 1073, 1429, 2053
Bsp1407I TGTACA 1 cut(s) 738
Bsp143I GATC 9 cut(s) 51, 124, 136, 298, 1220, 1282, 1379, 1469, 1682
Bsp1720I GCTNAGC 2 cut(s) 258, 1952
Bsp19I CCATGG 3 cut(s) 216, 974, 1326
BspANI GGCC 4 cut(s) 513, 687, 923, 943
BspCNI CTCAG 5 cut(s) 30, 542, 938, 1589, 1965
BspDI ATCGAT 1 cut(s) 830
BspHI TCATGA 2 cut(s) 139, 1692
BspLI GGNNCC 6 cut(s) 853, 1267, 1317, 1324, 1458, 1855
BspMAI CTGCAG 1 cut(s) 154
BspPI GGATC 4 cut(s) 46, 132, 306, 1477
BspT107I GGYRCC 2 cut(s) 1265, 1315
BspTNI GGTCTC 2 cut(s) 428, 1671
BsrDI GCAATG 1 cut(s) 1045
BsrGI TGTACA 1 cut(s) 738
BsrI ACTGG 4 cut(s) 267, 514, 608, 1555
BssECI CCNNGG 5 cut(s) 216, 974, 1326, 1452, 1505
BssMI GATC 9 cut(s) 51, 124, 136, 298, 1220, 1282, 1379, 1469, 1682
BssSI CACGAG 1 cut(s) 705
BssT1I CCWWGG 3 cut(s) 216, 974, 1326
Bst2BI CACGAG 1 cut(s) 705
Bst2UI CCWGG 6 cut(s) 1453, 1467, 1506, 1788, 1911, 2235
Bst4CI ACNGT 7 cut(s) 919, 988, 1981, 2074, 2156, 2206, 2231
BstAPI GCANNNNNTGC 3 cut(s) 254, 884, 893
BstAUI TGTACA 1 cut(s) 738
BstC8I GCNNGC 4 cut(s) 655, 1612, 1970, 2177
BstDEI CTNAG 8 cut(s) 17, 258, 529, 649, 693, 925, 1576, 1952
BstDSI CCRYGG 3 cut(s) 216, 974, 1326
BstEII GGTNACC 1 cut(s) 369
BstENI CCTNNNNNAGG 1 cut(s) 692
BstKTI GATC 9 cut(s) 54, 127, 139, 301, 1223, 1285, 1382, 1472, 1685
BstMAI GTCTC 3 cut(s) 7, 428, 1671
BstMBI GATC 9 cut(s) 51, 124, 136, 298, 1220, 1282, 1379, 1469, 1682
BstNI CCWGG 6 cut(s) 1453, 1467, 1506, 1788, 1911, 2235
BstNSI RCATGY 2 cut(s) 1614, 1622
BstPI GGTNACC 1 cut(s) 369
BstSCI CCNGG 7 cut(s) 1318, 1451, 1465, 1504, 1786, 1909, 2233
BstSFI CTRYAG 3 cut(s) 150, 207, 1846
BstSLI GKGCMC 1 cut(s) 701
BstV2I GAAGAC 1 cut(s) 150
BstX2I RGATCY 2 cut(s) 1220, 1682
BstXI CCANNNNNNTGG 1 cut(s) 495
BstYI RGATCY 2 cut(s) 1220, 1682
Bsu15I ATCGAT 1 cut(s) 830
BsuRI GGCC 4 cut(s) 513, 687, 923, 943
BsuTUI ATCGAT 1 cut(s) 830
BtgI CCRYGG 3 cut(s) 216, 974, 1326
BtsI GCAGTG 2 cut(s) 699, 720
BtsIMutI CAGTG 7 cut(s) 274, 615, 699, 720, 924, 2070, 2202
Cac8I GCNNGC 4 cut(s) 655, 1612, 1970, 2177
CaiI CAGNNNCTG 3 cut(s) 1238, 1505, 1985
CciI TCATGA 2 cut(s) 139, 1692
Cfr13I GGNCC 3 cut(s) 941, 1457, 2015
ClaI ATCGAT 1 cut(s) 830
Csp6I GTAC 5 cut(s) 739, 1096, 1230, 1266, 2200
CspCI CAANNNNNGTGG 2 cut(s) 2043, 2078
CviQI GTAC 5 cut(s) 739, 1096, 1230, 1266, 2200
DdeI CTNAG 8 cut(s) 17, 258, 529, 649, 693, 925, 1576, 1952
DpnI GATC 9 cut(s) 53, 126, 138, 300, 1222, 1284, 1381, 1471, 1684
DpnII GATC 9 cut(s) 51, 124, 136, 298, 1220, 1282, 1379, 1469, 1682
DraI TTTAAA 1 cut(s) 396
EaeI YGGCCR 1 cut(s) 511
Eco130I CCWWGG 3 cut(s) 216, 974, 1326
Eco31I GGTCTC 2 cut(s) 428, 1671
Eco47I GGWCC 2 cut(s) 1457, 2015
Eco88I CYCGRG 1 cut(s) 1768
Eco91I GGTNACC 1 cut(s) 369
EcoNI CCTNNNNNAGG 1 cut(s) 692
EcoO65I GGTNACC 1 cut(s) 369
EcoRI GAATTC 2 cut(s) 1580, 1739
EcoRII CCWGG 6 cut(s) 1451, 1465, 1504, 1786, 1909, 2233
EcoT14I CCWWGG 3 cut(s) 216, 974, 1326
EcoT22I ATGCAT 1 cut(s) 250
ErhI CCWWGG 3 cut(s) 216, 974, 1326
FalI AAGNNNNNCTT 2 cut(s) 2105, 2137
FaqI GGGAC 3 cut(s) 436, 643, 2199
FauNDI CATATG 4 cut(s) 48, 165, 1432, 1639
FbaI TGATCA 2 cut(s) 136, 1282
FspBI CTAG 7 cut(s) 558, 662, 726, 756, 996, 2022, 2196
GsaI CCCAGC 1 cut(s) 593
GsuI CTGGAG 3 cut(s) 429, 567, 591
HaeIII GGCC 4 cut(s) 513, 687, 923, 943
HapII CCGG 1 cut(s) 1319
HincII GTYRAC 2 cut(s) 964, 1333
HindII GTYRAC 2 cut(s) 964, 1333
HindIII AAGCTT 3 cut(s) 260, 457, 569
HpaI GTTAAC 1 cut(s) 1333
HpaII CCGG 1 cut(s) 1319
HphI GGTGA 4 cut(s) 119, 1374, 1646, 2146
Hpy166II GTNNAC 6 cut(s) 964, 1333, 1726, 1765, 2202, 2227
Hpy188III TCNNGA 8 cut(s) 140, 291, 446, 531, 584, 1292, 1596, 1693
Hpy8I GTNNAC 6 cut(s) 964, 1333, 1726, 1765, 2202, 2227
HpyAV CCTTC 4 cut(s) 464, 1049, 1835, 2131
HpyCH4III ACNGT 7 cut(s) 919, 988, 1981, 2074, 2156, 2206, 2231
HpyCH4IV ACGT 3 cut(s) 108, 1091, 1423
HpyF3I CTNAG 8 cut(s) 17, 258, 529, 649, 693, 925, 1576, 1952
HpySE526I ACGT 3 cut(s) 108, 1091, 1423
KpnI GGTACC 1 cut(s) 1269
Ksp22I TGATCA 2 cut(s) 136, 1282
KspAI GTTAAC 1 cut(s) 1333
Kzo9I GATC 9 cut(s) 51, 124, 136, 298, 1220, 1282, 1379, 1469, 1682
LmnI GCTCC 7 cut(s) 6, 554, 851, 1432, 1859, 1901, 2118
LweI GCATC 5 cut(s) 524, 1285, 1348, 1532, 1915
MaeI CTAG 7 cut(s) 558, 662, 726, 756, 996, 2022, 2196
MaeII ACGT 3 cut(s) 108, 1091, 1423
MaeIII GTNAC 9 cut(s) 184, 269, 313, 369, 407, 982, 1404, 1542, 2002
MalI GATC 9 cut(s) 53, 126, 138, 300, 1222, 1284, 1381, 1471, 1684
MboI GATC 9 cut(s) 51, 124, 136, 298, 1220, 1282, 1379, 1469, 1682
MboII GAAGA 5 cut(s) 29, 155, 913, 1057, 2007
MfeI CAATTG 1 cut(s) 1341
MflI RGATCY 2 cut(s) 1220, 1682
MhlI GDGCHC 4 cut(s) 701, 1073, 1429, 2053
MlsI TGGCCA 1 cut(s) 513
MluNI TGGCCA 1 cut(s) 513
MmeI TCCRAC 1 cut(s) 1536
Mox20I TGGCCA 1 cut(s) 513
Mph1103I ATGCAT 1 cut(s) 250
MroXI GAANNNNTTC 2 cut(s) 196, 1479
MscI TGGCCA 1 cut(s) 513
MseI TTAA 9 cut(s) 377, 395, 462, 1077, 1245, 1332, 1644, 1793, 2242
MslI CAYNNNNRTG 2 cut(s) 168, 1589
Msp20I TGGCCA 1 cut(s) 513
MspA1I CMGCKG 2 cut(s) 593, 929
MspI CCGG 1 cut(s) 1319
MspR9I CCNGG 7 cut(s) 1320, 1453, 1467, 1506, 1788, 1911, 2235
MunI CAATTG 1 cut(s) 1341
Mva1269I GAATGC 1 cut(s) 676
MvaI CCWGG 6 cut(s) 1453, 1467, 1506, 1788, 1911, 2235
NciI CCSGG 1 cut(s) 1320
NcoI CCATGG 3 cut(s) 216, 974, 1326
NdeI CATATG 4 cut(s) 48, 165, 1432, 1639
NdeII GATC 9 cut(s) 51, 124, 136, 298, 1220, 1282, 1379, 1469, 1682
NlaIV GGNNCC 6 cut(s) 853, 1267, 1317, 1324, 1458, 1855
NmeAIII GCCGAG 1 cut(s) 1896
NmuCI GTSAC 6 cut(s) 269, 313, 407, 1404, 1542, 2002
NsiI ATGCAT 1 cut(s) 250
NspI RCATGY 2 cut(s) 1614, 1622
PaeI GCATGC 1 cut(s) 1614
PagI TCATGA 2 cut(s) 139, 1692
PciI ACATGT 1 cut(s) 1618
PctI GAATGC 1 cut(s) 676
PdmI GAANNNNTTC 2 cut(s) 196, 1479
PfeI GAWTC 4 cut(s) 1235, 1783, 1906, 2143
PflMI CCANNNNNTGG 1 cut(s) 2131
PfoI TCCNGGA 3 cut(s) 1465, 1909, 2233
PscI ACATGT 1 cut(s) 1618
Psp6I CCWGG 6 cut(s) 1451, 1465, 1504, 1786, 1909, 2233
PspEI GGTNACC 1 cut(s) 369
PspFI CCCAGC 1 cut(s) 589
PspGI CCWGG 6 cut(s) 1451, 1465, 1504, 1786, 1909, 2233
PspN4I GGNNCC 6 cut(s) 853, 1267, 1317, 1324, 1458, 1855
PspPI GGNCC 3 cut(s) 941, 1457, 2015
PstI CTGCAG 1 cut(s) 154
PstNI CAGNNNCTG 3 cut(s) 1238, 1505, 1985
PsuI RGATCY 2 cut(s) 1220, 1682
PvuII CAGCTG 2 cut(s) 593, 929
RsaI GTAC 5 cut(s) 740, 1097, 1231, 1267, 2201
RsaNI GTAC 5 cut(s) 739, 1096, 1230, 1266, 2200
RseI CAYNNNNRTG 2 cut(s) 168, 1589
SaqAI TTAA 9 cut(s) 377, 395, 462, 1077, 1245, 1332, 1644, 1793, 2242
Sau3AI GATC 9 cut(s) 51, 124, 136, 298, 1220, 1282, 1379, 1469, 1682
Sau96I GGNCC 3 cut(s) 941, 1457, 2015
ScrFI CCNGG 7 cut(s) 1320, 1453, 1467, 1506, 1788, 1911, 2235
SduI GDGCHC 4 cut(s) 701, 1073, 1429, 2053
SfaNI GCATC 5 cut(s) 524, 1285, 1348, 1532, 1915
SfcI CTRYAG 3 cut(s) 150, 207, 1846
SinI GGWCC 2 cut(s) 1457, 2015
SmiMI CAYNNNNRTG 2 cut(s) 168, 1589
SmlI CTYRAG 2 cut(s) 1484, 1668
SmoI CTYRAG 2 cut(s) 1484, 1668
SphI GCATGC 1 cut(s) 1614
SspI AATATT 1 cut(s) 1308
SspMI CTAG 7 cut(s) 558, 662, 726, 756, 996, 2022, 2196
StyD4I CCNGG 7 cut(s) 1318, 1451, 1465, 1504, 1786, 1909, 2233
StyI CCWWGG 3 cut(s) 216, 974, 1326
TaaI ACNGT 7 cut(s) 919, 988, 1981, 2074, 2156, 2206, 2231
TaiI ACGT 3 cut(s) 111, 1094, 1426
TaqI TCGA 3 cut(s) 644, 830, 1293
TatI WGTACW 1 cut(s) 738
TfiI GAWTC 4 cut(s) 1235, 1783, 1906, 2143
Tru1I TTAA 9 cut(s) 377, 395, 462, 1077, 1245, 1332, 1644, 1793, 2242
Tru9I TTAA 9 cut(s) 377, 395, 462, 1077, 1245, 1332, 1644, 1793, 2242
TscAI CASTG 7 cut(s) 274, 615, 706, 720, 924, 2077, 2209
TseFI GTSAC 6 cut(s) 269, 313, 407, 1404, 1542, 2002
Tsp45I GTSAC 6 cut(s) 269, 313, 407, 1404, 1542, 2002
TspRI CASTG 7 cut(s) 274, 615, 706, 720, 924, 2077, 2209
Van91I CCANNNNNTGG 1 cut(s) 2131
VpaK11BI GGWCC 2 cut(s) 1457, 2015
XagI CCTNNNNNAGG 1 cut(s) 692
XapI RAATTY 3 cut(s) 1048, 1580, 1739
XceI RCATGY 2 cut(s) 1614, 1622
XcmI CCANNNNNNNNNTGG 1 cut(s) 492
XmnI GAANNNNTTC 2 cut(s) 196, 1479
XspI CTAG 7 cut(s) 558, 662, 726, 756, 996, 2022, 2196
Zsp2I ATGCAT 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.