Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

17541114 .. 17545805

Gene Structure 4692 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G117400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2832 bp

ATGGCGGATGCGGTTGTTTCCTTTGTGCTGGAACAGCTCACTGACTCTGTCATTCAGGAATTGAAATTCTTGGGTGGAGTGAGAGATCAGGTGAAGCTTGCACAAACCCAGCTACAATTGATGCGAGGCTACCTCAAAGATGCAGATTCAAGACAAGGAGAAAGTGAAGCAATACGCATTTGGGTGGCAAATATTAAAGATGCGGCTTATGATCTGGACGACGCCATCGAAACTTTTGTCTTAAAAATGGCTTCCAAGAGGAATGCAAGTCTTTTCAAAAGGATTGCTTACATCTGCGTAGGAGGAGTTTATCTTTACAAGATTGGCTCAGAAATCAAGAAAATTACTACCAAAATTTCAGAGTTGAGATCGAGCCTGCCACCAGGTGACCTAAGGGAGAGTGGAGGTGACACTTCTTTTCAGAGGCAACGAGAACGGAGGATAGCTTATCCTCATATTATCGAACCTCATGTGGTTGGGTTAGCCGGTGGAACGGAGATATTGGCTACGCATTTGATCAAAGAAAAAGGCCCCCGAGTTGTTTCTATTTGGGGGATGGGCGGGTTGGGTAAAACCACTCTTGCAAAACAAGTTTATCATCACGGTAAGGTTAAGCGTCATTTCGATTGTTTTGCCTGGGTGTGTATCTCTCAACAATGCCAGGGACGGGAGGTTTTGAAAGAAATTCTGACAAAACTCATTTCTCCTACCAATGAGCAAAGACAAAAAATTGCAGATCTGGGGAAGGATCAAATTGCAGAGTGGCTTTGGAATACGCAGAGAGAAAGGAAATGTTTGGTGGTGCTGGATGACATTTGGACCCGTGATGCGTGGAGGTCGTTGGAAGTGGGATTTCCAATGACTGAGGAAACTGAGAGTCGAATTTTACTCACTACTCGCAACAAAGAAGTCGCTTCGTATGTGGACAAAAATGGTTTCCTCTTCGAACCACAGCCGTTGAATGATGATGAAAGCTGGGAACTGTTTGAGAAGAGAGCAATGTTTGAAACGGAAGATACAAACCATAAAATTTATGAACAAAAGAAAGAGCTAGGAACAGAGATGCTTCAAAATTGCAAAGGTTTGCCATTAGCCATCACGGTGCTTGCAGGACTGCTAGCTAGAAAAGACACAGTTGATGAGTGGAATACTGTCCATAAGAATGTTTATGCATATATAAGAAGAGGCACAGACCTTGGGCCCGATTACAAAGGTGAAGGATATGAAGGGGTATCATGGTTATTGGAATTGAGTTACGATAACTTACCATATTACTTAAAACTATGTTTTCTCTACTTAGCCCATTTTCCAGAAGATTATGAAATACCAGTGGGTACACTGACTAAACTATGGATGGCAGAAGGTTTTATGTCATCAGCATCAGCGGAAGTAATGGAAGATGTATCATATATGTGCTTAAGTGAGTTGGTGGGCAGGTGTATGGTTCAAGTTGGAAAACATGGTTCAAGAAAGAAAATCAAGACTTGTCATCTCCATGATCTTATGCGAGACTTATGCATGTTAAAGGCAAAAGAGGGGAACTTTCTCCATATTATCAATTATTCTGCAGCTGTGGAGACCAATGAAACACCAAACGGTAGAGTTCGAAGACTTGCCATCTATTTGGACAAAACGGTTGATACATATGGTCCAGAGAAAGATGAAAATTATGGACATATTAGGTCTTTGTTATACTTTGTCCCAGAATACTACTTCATGAACTCAAAGGCATTATGGTCGGTATTCAAGTACTTCACATTATTTGGAGTTCTGAAGTTTGAAGGTCTGAGTGTTAGGTCTCTATTCAAGAACTTCACATTACTTAGAGTTCTGAAGTTTGAAGGTATGAGTGTTGGAAAACACAAATTACCTAGTGAAATTGGGAATCTAGTGCACTTAAGGTTTTTAAGTGTGAAGGATAGTGATATTCGAGCGATACCATCATCTATAGCAACTTTGGTATGTTTGCAGACTCTAGATTTACGTACAATGTGGGGGACTGAAATTCCAAATGGAAACGTGTTTTCCAAGATGGAAAAATTGAGACATATATACTTACCCAAATATCACAGTGCAAGACGTCTGTTATTTGCTACTGAGGTAGTGAATTTGCACACGGTAGTCAATATATATATTCAGGCATCATCTGATCTAGATGATTTTGTTAAACTAACCAACCTTAGAAAATTGGGAGTTATCACATTTGACGGAGGGGAAAAAAAGGAGAAAGGGACAAACATCATATTTAAGCACCTCCAGTCTCTATCGGTGGACTCCACATTGTTCTCTGGTGGATTGTTCTCTGGTACGTCCACGTTTTTACCAATACCATGGAACATAGTATTAAGCTGTCCTAATATATACAAGCTGCGACTACGCGGAGAAATCGCTGAGTTACCAGAAGACCTCATGTGCCTTACGAACCTCACCAAGCTTACACTGAGAGAATTTGGTAATCTCAAGGACGACCACATAAAAGTATTTGAGAAGCTGCCAAGCTTGAGAATGCTTTCTGCTAGTTGCGGGAATTTTCCGGAATTTCTTGTTTGCTCAAAGGGAGGCTTTCCATTTCTCGAATTTCTTTCTCTTCATTTGGTGGAGGAGTTAAAAGAATGGAAGGTGGAGAAAGGAGCCATGCCTAGTCTCTGCAGATTGCACATTGATCATTGCTTAGTTTTGGAGGCAGTTCCTGATGGGCTCCAATATATTACTTCCCTCAAGGAATTAACCATCAAATCGATGCTTCCAGAATTCTGTAGCCGGCTTCGGGAAGGAGGAGAAGATTTTTACAAAATCCAACATGTGCAGTCTGTTATAATTTCATATGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

944

Amino Acids

107.65

Weight (kDa)

7.53

Isoelectric Point (pI)

42.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2816
AarI	CACCTGC	1 cut(s)	1425
AatII	GACGTC	1 cut(s)	2083
Acc36I	ACCTGC	1 cut(s)	1425
AccII	CGCG	1 cut(s)	2379
AccIII	TCCGGA	1 cut(s)	2533
AciI	CCGC	7 cut(s)	5, 11, 203, 561, 1385, 2379, 2523
AclWI	GGATC	1 cut(s)	756
AcuI	CTGAAG	2 cut(s)	1793, 1853
AcyI	GRCGYC	2 cut(s)	222, 2080
AdeI	CACNNNGTG	1 cut(s)	386
AfaI	GTAC	4 cut(s)	1336, 1751, 1987, 2308
AfiI	CCNNNNNNNGG	2 cut(s)	667, 2767
AflII	CTTAAG	2 cut(s)	1417, 1897
AflIII	ACRYGT	2 cut(s)	2019, 2800
AjnI	CCWGG	3 cut(s)	382, 635, 660
Alw21I	GWGCWC	1 cut(s)	1896
Alw26I	GTCTC	6 cut(s)	1503, 1571, 1803, 2038, 2265, 2648
Alw44I	GTGCAC	1 cut(s)	1892
AlwI	GGATC	1 cut(s)	756
AlwNI	CAGNNNCTG	1 cut(s)	2690
Ama87I	CYCGRG	1 cut(s)	534
Aor13HI	TCCGGA	1 cut(s)	2533
AoxI	GGCC	2 cut(s)	529, 1199
ApaI	GGGCCC	1 cut(s)	1203
ApaLI	GTGCAC	1 cut(s)	1892
ApeKI	GCWGC	3 cut(s)	1568, 2368, 2491
ArsI	GACNNNNNNTTYG	2 cut(s)	222, 254
Asp700I	GAANNNNTTC	1 cut(s)	2509
AspS9I	GGNCC	5 cut(s)	530, 819, 1199, 1200, 1649
AsuHPI	GGTGA	5 cut(s)	103, 398, 419, 1226, 2419
AsuII	TTCGAA	2 cut(s)	945, 1606
AsuNHI	GCTAGC	1 cut(s)	1117
AvaI	CYCGRG	1 cut(s)	534
AvaII	GGWCC	2 cut(s)	819, 1649
AxyI	CCTNAGG	1 cut(s)	392
BaeGI	GKGCMC	2 cut(s)	1203, 1896
BanII	GRGCYC	2 cut(s)	1203, 2700
BbsI	GAAGAC	2 cut(s)	1615, 2409
Bbv12I	GWGCWC	1 cut(s)	1896
BbvI	GCAGC	3 cut(s)	1580, 2355, 2478
BccI	CCATC	9 cut(s)	233, 550, 1103, 1348, 1625, 1948, 2026, 2687, 2738
BceAI	ACGGC	1 cut(s)	940
BcgI	CGANNNNNNTGC	6 cut(s)	614, 648, 1497, 1531, 1719, 1753
BciT130I	CCWGG	3 cut(s)	384, 637, 662
BclI	TGATCA	2 cut(s)	516, 2662
BcoDI	GTCTC	6 cut(s)	1503, 1571, 1803, 2038, 2265, 2648
BfaI	CTAG	9 cut(s)	1052, 1118, 1122, 1872, 1889, 1976, 2153, 2517, 2640
BfmI	CTRYAG	4 cut(s)	1566, 1947, 2647, 2755
BfrI	CTTAAG	2 cut(s)	1417, 1897
BfuAI	ACCTGC	1 cut(s)	1425
BglII	AGATCT	1 cut(s)	736
BisI	GCNGC	4 cut(s)	204, 1569, 2369, 2492
BlsI	GCNGC	4 cut(s)	205, 1570, 2370, 2493
BmcAI	AGTACT	1 cut(s)	1751
Bme1390I	CCNGG	3 cut(s)	384, 637, 662
Bme18I	GGWCC	2 cut(s)	819, 1649
BmeT110I	CYCGRG	1 cut(s)	534
BmgT120I	GGNCC	5 cut(s)	530, 819, 1199, 1200, 1649
BmiI	GGNNCC	5 cut(s)	532, 821, 1201, 2632, 2699
BmrFI	CCNGG	3 cut(s)	384, 637, 662
BmsI	GCATC	8 cut(s)	111, 130, 190, 817, 1053, 1388, 2150, 2730
BmtI	GCTAGC	1 cut(s)	1121
BpiI	GAAGAC	2 cut(s)	1615, 2409
BplI	GAGNNNNNCTC	2 cut(s)	117, 149
BpmI	CTGGAG	1 cut(s)	2240
Bpu14I	TTCGAA	2 cut(s)	945, 1606
BpuEI	CTTGAG	3 cut(s)	2444, 2521, 2702
Bsa29I	ATCGAT	1 cut(s)	2738
BsaAI	YACGTR	1 cut(s)	1985
BsaHI	GRCGYC	2 cut(s)	222, 2080
BsaI	GGTCTC	2 cut(s)	1571, 1803
BsaJI	CCNNGG	4 cut(s)	636, 661, 1195, 2330
BsaWI	WCCGGW	1 cut(s)	2533
Bsc4I	CCNNNNNNNGG	2 cut(s)	667, 2767
Bse118I	RCCGGY	2 cut(s)	485, 2760
Bse1I	ACTGG	2 cut(s)	1328, 2257
Bse21I	CCTNAGG	1 cut(s)	392
Bse3DI	GCAATG	2 cut(s)	1005, 2665
BseAI	TCCGGA	1 cut(s)	2533
BseBI	CCWGG	3 cut(s)	384, 637, 662
BseCI	ATCGAT	1 cut(s)	2738
BseDI	CCNNGG	4 cut(s)	636, 661, 1195, 2330
BseGI	GGATG	4 cut(s)	13, 561, 814, 1359
BseLI	CCNNNNNNNGG	2 cut(s)	667, 2767
BseMI	GCAATG	2 cut(s)	1005, 2665
BseMII	CTCAG	7 cut(s)	342, 855, 864, 1778, 2088, 2382, 2432
BseNI	ACTGG	2 cut(s)	1328, 2257
BseRI	GAGGAG	3 cut(s)	318, 2615, 2790
BseSI	GKGCMC	2 cut(s)	1203, 1896
BseXI	GCAGC	3 cut(s)	1580, 2355, 2478
BseYI	CCCAGC	2 cut(s)	108, 975
BsgI	GTGCAG	1 cut(s)	2825
Bsh1236I	CGCG	1 cut(s)	2379
BshFI	GGCC	2 cut(s)	531, 1201
BshVI	ATCGAT	1 cut(s)	2738
BsiHKAI	GWGCWC	1 cut(s)	1896
BsiHKCI	CYCGRG	1 cut(s)	534
BsiSI	CCGG	3 cut(s)	486, 2534, 2761
BslFI	GGGAC	4 cut(s)	678, 1685, 2011, 2245
BslI	CCNNNNNNNGG	2 cut(s)	667, 2767
BsmAI	GTCTC	6 cut(s)	1503, 1571, 1803, 2038, 2265, 2648
BsmFI	GGGAC	4 cut(s)	678, 1685, 2011, 2245
BsmI	GAATGC	2 cut(s)	268, 2511
BsnI	GGCC	2 cut(s)	531, 1201
Bso31I	GGTCTC	2 cut(s)	1571, 1803
BsoBI	CYCGRG	1 cut(s)	534
Bsp119I	TTCGAA	2 cut(s)	945, 1606
Bsp120I	GGGCCC	1 cut(s)	1199
Bsp1286I	GDGCHC	3 cut(s)	1203, 1896, 2700
Bsp13I	TCCGGA	1 cut(s)	2533
Bsp143I	GATC	9 cut(s)	85, 211, 368, 516, 736, 748, 1498, 2149, 2662
Bsp19I	CCATGG	1 cut(s)	2330
BspACI	CCGC	7 cut(s)	5, 11, 203, 561, 1385, 2379, 2523
BspANI	GGCC	2 cut(s)	531, 1201
BspCNI	CTCAG	7 cut(s)	341, 856, 865, 1779, 2089, 2383, 2433
BspDI	ATCGAT	1 cut(s)	2738
BspEI	TCCGGA	1 cut(s)	2533
BspFNI	CGCG	1 cut(s)	2379
BspHI	TCATGA	1 cut(s)	1716
BspLI	GGNNCC	5 cut(s)	532, 821, 1201, 2632, 2699
BspMAI	CTGCAG	2 cut(s)	1570, 2651
BspMI	ACCTGC	1 cut(s)	1425
BspOI	GCTAGC	1 cut(s)	1121
BspPI	GGATC	1 cut(s)	756
BspT104I	TTCGAA	2 cut(s)	945, 1606
BspTI	CTTAAG	2 cut(s)	1417, 1897
BspTNI	GGTCTC	2 cut(s)	1571, 1803
BsrDI	GCAATG	2 cut(s)	1005, 2665
BsrFI	RCCGGY	2 cut(s)	485, 2760
BsrI	ACTGG	2 cut(s)	1328, 2257
BssAI	RCCGGY	2 cut(s)	485, 2760
BssECI	CCNNGG	4 cut(s)	636, 661, 1195, 2330
BssMI	GATC	9 cut(s)	85, 211, 368, 516, 736, 748, 1498, 2149, 2662
BssNI	GRCGYC	2 cut(s)	222, 2080
BssT1I	CCWWGG	2 cut(s)	1195, 2330
Bst2UI	CCWGG	3 cut(s)	384, 637, 662
Bst4CI	ACNGT	9 cut(s)	605, 984, 1102, 1135, 1153, 1598, 1636, 2072, 2119
Bst6I	CTCTTC	4 cut(s)	947, 986, 1177, 2592
BstACI	GRCGYC	2 cut(s)	222, 2080
BstAFI	CTTAAG	2 cut(s)	1417, 1897
BstBAI	YACGTR	1 cut(s)	1985
BstBI	TTCGAA	2 cut(s)	945, 1606
BstC8I	GCNNGC	5 cut(s)	99, 377, 1107, 1119, 2762
BstDSI	CCRYGG	1 cut(s)	2330
BstEII	GGTNACC	1 cut(s)	386
BstF5I	GGATG	4 cut(s)	13, 561, 814, 1359
BstFNI	CGCG	1 cut(s)	2379
BstKTI	GATC	9 cut(s)	88, 214, 371, 519, 739, 751, 1501, 2152, 2665
BstMAI	GTCTC	6 cut(s)	1503, 1571, 1803, 2038, 2265, 2648
BstMBI	GATC	9 cut(s)	85, 211, 368, 516, 736, 748, 1498, 2149, 2662
BstMWI	GCNNNNNNNGC	1 cut(s)	34
BstNI	CCWGG	3 cut(s)	384, 637, 662
BstNSI	RCATGY	2 cut(s)	1522, 2804
BstPI	GGTNACC	1 cut(s)	386
BstSCI	CCNGG	3 cut(s)	382, 635, 660
BstSFI	CTRYAG	4 cut(s)	1566, 1947, 2647, 2755
BstSLI	GKGCMC	2 cut(s)	1203, 1896
BstSNI	TACGTA	1 cut(s)	1985
BstUI	CGCG	1 cut(s)	2379
BstV1I	GCAGC	3 cut(s)	1580, 2355, 2478
BstV2I	GAAGAC	2 cut(s)	1615, 2409
BstX2I	RGATCY	1 cut(s)	736
BstXI	CCANNNNNNTGG	2 cut(s)	1624, 2331
BstYI	RGATCY	1 cut(s)	736
Bsu15I	ATCGAT	1 cut(s)	2738
Bsu36I	CCTNAGG	1 cut(s)	392
BsuRI	GGCC	2 cut(s)	531, 1201
BsuTUI	ATCGAT	1 cut(s)	2738
BtgI	CCRYGG	1 cut(s)	2330
BtsCI	GGATG	4 cut(s)	13, 561, 814, 1359
BtsIMutI	CAGTG	5 cut(s)	39, 1335, 1337, 2077, 2438
BveI	ACCTGC	1 cut(s)	1425
Cac8I	GCNNGC	5 cut(s)	99, 377, 1107, 1119, 2762
CaiI	CAGNNNCTG	1 cut(s)	2690
CciI	TCATGA	1 cut(s)	1716
Cfr10I	RCCGGY	2 cut(s)	485, 2760
Cfr13I	GGNCC	5 cut(s)	530, 819, 1199, 1200, 1649
ClaI	ATCGAT	1 cut(s)	2738
CseI	GACGC	2 cut(s)	230, 605
CsiI	ACCWGGT	1 cut(s)	382
Csp6I	GTAC	4 cut(s)	1335, 1750, 1986, 2307
CspCI	CAANNNNNGTGG	2 cut(s)	939, 974
CviQI	GTAC	4 cut(s)	1335, 1750, 1986, 2307
DpnI	GATC	9 cut(s)	87, 213, 370, 518, 738, 750, 1500, 2151, 2664
DpnII	GATC	9 cut(s)	85, 211, 368, 516, 736, 748, 1498, 2149, 2662
DraIII	CACNNNGTG	1 cut(s)	386
Eam1104I	CTCTTC	4 cut(s)	947, 986, 1177, 2592
EarI	CTCTTC	4 cut(s)	947, 986, 1177, 2592
EciI	GGCGGA	1 cut(s)	20
Eco105I	TACGTA	1 cut(s)	1985
Eco130I	CCWWGG	2 cut(s)	1195, 2330
Eco24I	GRGCYC	2 cut(s)	1203, 2700
Eco31I	GGTCTC	2 cut(s)	1571, 1803
Eco47I	GGWCC	2 cut(s)	819, 1649
Eco57I	CTGAAG	2 cut(s)	1793, 1853
Eco81I	CCTNAGG	1 cut(s)	392
Eco88I	CYCGRG	1 cut(s)	534
Eco91I	GGTNACC	1 cut(s)	386
EcoO109I	RGGNCCY	1 cut(s)	530
EcoO65I	GGTNACC	1 cut(s)	386
EcoRI	GAATTC	1 cut(s)	2750
EcoRII	CCWGG	3 cut(s)	382, 635, 660
EcoT14I	CCWWGG	2 cut(s)	1195, 2330
EcoT22I	ATGCAT	2 cut(s)	1174, 1520
EcoT38I	GRGCYC	2 cut(s)	1203, 2700
ErhI	CCWWGG	2 cut(s)	1195, 2330
FalI	AAGNNNNNCTT	4 cut(s)	271, 303, 2546, 2578
FaqI	GGGAC	4 cut(s)	678, 1685, 2011, 2245
FauI	CCCGC	2 cut(s)	554, 2516
FauNDI	CATATG	2 cut(s)	1645, 2824
FbaI	TGATCA	2 cut(s)	516, 2662
Fnu4HI	GCNGC	4 cut(s)	204, 1569, 2369, 2492
FokI	GGATG	4 cut(s)	20, 568, 821, 1366
FriOI	GRGCYC	2 cut(s)	1203, 2700
Fsp4HI	GCNGC	4 cut(s)	204, 1569, 2369, 2492
FspBI	CTAG	9 cut(s)	1052, 1118, 1122, 1872, 1889, 1976, 2153, 2517, 2640
GluI	GCNGC	4 cut(s)	204, 1569, 2369, 2492
GsaI	CCCAGC	2 cut(s)	112, 979
GsuI	CTGGAG	1 cut(s)	2240
HaeIII	GGCC	2 cut(s)	531, 1201
HapII	CCGG	3 cut(s)	486, 2534, 2761
HgaI	GACGC	2 cut(s)	230, 605
Hin1I	GRCGYC	2 cut(s)	222, 2080
HindIII	AAGCTT	3 cut(s)	95, 2432, 2497
HinfI	GANTC	6 cut(s)	44, 146, 877, 1885, 1972, 2273
HpaII	CCGG	3 cut(s)	486, 2534, 2761
HphI	GGTGA	5 cut(s)	103, 398, 419, 1226, 2419
Hpy166II	GTNNAC	5 cut(s)	925, 1337, 1894, 2272, 2313
Hpy188I	TCNGA	8 cut(s)	331, 361, 423, 690, 1773, 1788, 1833, 2149
Hpy8I	GTNNAC	5 cut(s)	925, 1337, 1894, 2272, 2313
Hpy99I	CGWCG	1 cut(s)	224
HpyAV	CCTTC	9 cut(s)	739, 1211, 1220, 1355, 1775, 1835, 1909, 2611, 2765
HpyCH4III	ACNGT	9 cut(s)	605, 984, 1102, 1135, 1153, 1598, 1636, 2072, 2119
HpyCH4IV	ACGT	5 cut(s)	1984, 2019, 2080, 2309, 2315
HpyF10VI	GCNNNNNNNGC	1 cut(s)	34
HpySE526I	ACGT	5 cut(s)	1984, 2019, 2080, 2309, 2315
Hsp92I	GRCGYC	2 cut(s)	222, 2080
Kpn2I	TCCGGA	1 cut(s)	2533
KroI	GCCGGC	1 cut(s)	2760
KroNI	GCCGGC	1 cut(s)	2762
Ksp22I	TGATCA	2 cut(s)	516, 2662
Kzo9I	GATC	9 cut(s)	85, 211, 368, 516, 736, 748, 1498, 2149, 2662
LmnI	GCTCC	2 cut(s)	2630, 2703
Lsp1109I	GCAGC	3 cut(s)	1580, 2355, 2478
LweI	GCATC	8 cut(s)	111, 130, 190, 817, 1053, 1388, 2150, 2730
MabI	ACCWGGT	1 cut(s)	382
MaeI	CTAG	9 cut(s)	1052, 1118, 1122, 1872, 1889, 1976, 2153, 2517, 2640
MaeII	ACGT	5 cut(s)	1984, 2019, 2080, 2309, 2315
MaeIII	GTNAC	4 cut(s)	386, 407, 1253, 2394
MalI	GATC	9 cut(s)	87, 213, 370, 518, 738, 750, 1500, 2151, 2664
MboI	GATC	9 cut(s)	85, 211, 368, 516, 736, 748, 1498, 2149, 2662
MfeI	CAATTG	1 cut(s)	116
MflI	RGATCY	1 cut(s)	736
MhlI	GDGCHC	3 cut(s)	1203, 1896, 2700
MlyI	GAGTC	4 cut(s)	38, 886, 1966, 2267
MmeI	TCCRAC	4 cut(s)	822, 1432, 1834, 2821
Mph1103I	ATGCAT	2 cut(s)	1174, 1520
MroI	TCCGGA	1 cut(s)	2533
MroNI	GCCGGC	1 cut(s)	2760
MroXI	GAANNNNTTC	1 cut(s)	2509
MslI	CAYNNNNRTG	5 cut(s)	182, 1100, 1161, 1411, 1494
MspA1I	CMGCKG	2 cut(s)	1385, 1571
MspCI	CTTAAG	2 cut(s)	1417, 1897
MspI	CCGG	3 cut(s)	486, 2534, 2761
MspR9I	CCNGG	3 cut(s)	384, 637, 662
MunI	CAATTG	1 cut(s)	116
Mva1269I	GAATGC	2 cut(s)	268, 2511
MvaI	CCWGG	3 cut(s)	384, 637, 662
MvnI	CGCG	1 cut(s)	2379
MwoI	GCNNNNNNNGC	1 cut(s)	34
NaeI	GCCGGC	1 cut(s)	2762
NcoI	CCATGG	1 cut(s)	2330
NdeI	CATATG	2 cut(s)	1645, 2824
NdeII	GATC	9 cut(s)	85, 211, 368, 516, 736, 748, 1498, 2149, 2662
NgoMIV	GCCGGC	1 cut(s)	2760
NheI	GCTAGC	1 cut(s)	1117
NlaIV	GGNNCC	5 cut(s)	532, 821, 1201, 2632, 2699
NmuCI	GTSAC	2 cut(s)	386, 407
NsiI	ATGCAT	2 cut(s)	1174, 1520
NspI	RCATGY	2 cut(s)	1522, 2804
NspV	TTCGAA	2 cut(s)	945, 1606
PagI	TCATGA	1 cut(s)	1716
PaqCI	CACCTGC	1 cut(s)	1425
PciI	ACATGT	1 cut(s)	2800
PcsI	WCGNNNNNNNCGW	1 cut(s)	225
PctI	GAATGC	2 cut(s)	268, 2511
PdiI	GCCGGC	1 cut(s)	2762
PdmI	GAANNNNTTC	1 cut(s)	2509
PfeI	GAWTC	2 cut(s)	146, 1885
PflFI	GACNNNGTC	1 cut(s)	47
PkrI	GCNGC	4 cut(s)	205, 1570, 2370, 2493
PleI	GAGTC	4 cut(s)	38, 885, 1966, 2267
PpsI	GAGTC	4 cut(s)	38, 885, 1966, 2267
Ppu21I	YACGTR	1 cut(s)	1985
PscI	ACATGT	1 cut(s)	2800
PsiI	TTATAA	1 cut(s)	2816
Psp6I	CCWGG	3 cut(s)	382, 635, 660
PspEI	GGTNACC	1 cut(s)	386
PspFI	CCCAGC	2 cut(s)	108, 975
PspGI	CCWGG	3 cut(s)	382, 635, 660
PspN4I	GGNNCC	5 cut(s)	532, 821, 1201, 2632, 2699
PspOMI	GGGCCC	1 cut(s)	1199
PspPI	GGNCC	5 cut(s)	530, 819, 1199, 1200, 1649
PstI	CTGCAG	2 cut(s)	1570, 2651
PstNI	CAGNNNCTG	1 cut(s)	2690
PsuI	RGATCY	1 cut(s)	736
PsyI	GACNNNGTC	1 cut(s)	47
PvuII	CAGCTG	1 cut(s)	1571
RsaI	GTAC	4 cut(s)	1336, 1751, 1987, 2308
RsaNI	GTAC	4 cut(s)	1335, 1750, 1986, 2307
RseI	CAYNNNNRTG	5 cut(s)	182, 1100, 1161, 1411, 1494
SatI	GCNGC	4 cut(s)	204, 1569, 2369, 2492
Sau3AI	GATC	9 cut(s)	85, 211, 368, 516, 736, 748, 1498, 2149, 2662
Sau96I	GGNCC	5 cut(s)	530, 819, 1199, 1200, 1649
ScaI	AGTACT	1 cut(s)	1751
SchI	GAGTC	4 cut(s)	38, 886, 1966, 2267
ScrFI	CCNGG	3 cut(s)	384, 637, 662
SduI	GDGCHC	3 cut(s)	1203, 1896, 2700
SexAI	ACCWGGT	1 cut(s)	382
SfaNI	GCATC	8 cut(s)	111, 130, 190, 817, 1053, 1388, 2150, 2730
SfcI	CTRYAG	4 cut(s)	1566, 1947, 2647, 2755
SfuI	TTCGAA	2 cut(s)	945, 1606
SinI	GGWCC	2 cut(s)	819, 1649
SmiMI	CAYNNNNRTG	5 cut(s)	182, 1100, 1161, 1411, 1494
SmlI	CTYRAG	5 cut(s)	1417, 1897, 2459, 2500, 2717
SmoI	CTYRAG	5 cut(s)	1417, 1897, 2459, 2500, 2717
SnaBI	TACGTA	1 cut(s)	1985
SsiI	CCGC	7 cut(s)	5, 11, 203, 561, 1385, 2379, 2523
SspI	AATATT	1 cut(s)	193
SspMI	CTAG	9 cut(s)	1052, 1118, 1122, 1872, 1889, 1976, 2153, 2517, 2640
StyD4I	CCNGG	3 cut(s)	382, 635, 660
StyI	CCWWGG	2 cut(s)	1195, 2330
TaaI	ACNGT	9 cut(s)	605, 984, 1102, 1135, 1153, 1598, 1636, 2072, 2119
TaiI	ACGT	5 cut(s)	1987, 2022, 2083, 2312, 2318
TatI	WGTACW	1 cut(s)	1749
TauI	GCSGC	1 cut(s)	206
TfiI	GAWTC	2 cut(s)	146, 1885
TscAI	CASTG	5 cut(s)	46, 1335, 1344, 2077, 2445
TseFI	GTSAC	2 cut(s)	386, 407
TseI	GCWGC	3 cut(s)	1568, 2368, 2491
Tsp45I	GTSAC	2 cut(s)	386, 407
TspGWI	ACGGA	4 cut(s)	451, 509, 1025, 2223
TspRI	CASTG	5 cut(s)	46, 1335, 1344, 2077, 2445
Tth111I	GACNNNGTC	1 cut(s)	47
Vha464I	CTTAAG	2 cut(s)	1417, 1897
VneI	GTGCAC	1 cut(s)	1892
VpaK11BI	GGWCC	2 cut(s)	819, 1649
XbaI	TCTAGA	2 cut(s)	1975, 2152
XceI	RCATGY	2 cut(s)	1522, 2804
XmnI	GAANNNNTTC	1 cut(s)	2509
XspI	CTAG	9 cut(s)	1052, 1118, 1122, 1872, 1889, 1976, 2153, 2517, 2640
ZraI	GACGTC	1 cut(s)	2081
ZrmI	AGTACT	1 cut(s)	1751
Zsp2I	ATGCAT	2 cut(s)	1174, 1520

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.