Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

35868816 .. 35872356

Gene Structure 3541 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G016180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2991 bp

ATGGCTGAAGGTGTTGTTAGAGTTGTGGCTGAAGGGATGAAGCCCCTGGGAGACTTCATCATTCAGCAAGCGAAGTTCTTGAGTGGAGTCAGCTATCAAGTTGAGCTTGCACAAGTTGAACTACACTTGATCCTGGGCTTCCTCAGAGATGCAGATGCAAGACAAGGAGATGAAGAGGTAGTACGCATTTGGGTTAAACTGATTAGAGATGCTGCTTATGACTTGGAGGATGTCACTGAATCTTTTGCCTTGAAAGTGGCTTCCAGGAGGAGAGGAGGTACTGTGAAGATTGTTCTCAAAAGGTTTGCCTGCATCTTTAATGAAGGACTTAATCGATACAAGATTGGGTCCGAAATTGAGCATATTATGACCAAACTGTCTCATCTGAGGTCGAGTTTGCAGAGTTATAACATAAGACAGATAAGTGGGGGTGAAAGTGTGGCTTCTGCTTGCAAGAGGCAACTAGATAGGAGGCTAACTTATGCTCATGAAGTTGAAAGTTATATTGTTGGGTTGGAGGAAAACACAGAAAGACTAGTGAAAGAGTTGGTGAGAGACGGAAAGCGTCACCGTGTTGTTTCTATTTGGGGGATGGGCGGCTCCGGAAAAACCACTCTTGCAAAACAAGTTTTTCTTCAAAATGAAGTTAAGCGTCATTTTGATTGTTTTGCTTGGGTCTGTATATCTCAACAATGGGAAGGAAAGGATGTATTGGAAGAGTGTTTAATTAAACTCACTTCCCCAACTACAGAGAAAAGGAAAGAAATTTCCAAACTGAAAAAGGATGAAATAGCAAGGGAGGTCTGTAGTATCCAACGAGAAAAGAGATGTCTGTTCGTCCTCGATGACATATGGACTCAAGAGGCTTGGAATTCGATAAAAGCTGGATTCCCAATCAATGAGGAAACAGAGAGCCGGATATTACTCACTACTCGCAAGAAAGAAGTCGCCTTGCTTGCATCCAGAAATGATCATCTCCACCAACCTCAACAATTAAATGACAACCAGAGCTGGAAATTGTTTGAAAAGATAGCCATATGTGGAAGAGACCAAACGGACTTGGAAGTTTATGCAAAGAAGAAAGAATCAGGAAAGAAGATGCTCGTACATTGTTCAGGTTTGCCATTAGCCATCAGTGTGCTTGCTGGTCTTCTAAGTAGACGAGAGAGAGTTGATGAGTGGGATACAGTACTTAGAAATGCCGATGTATACATAATGAGAGGCACAAATGCCCTTGAAAGAGAAAAGACAGGTCAGGAGTGTGGTGTTTCAGGTGTCTTGGCATTGAGTTATGATGACTTACCATCCCACTTAAAACTATGCTTTTTGTATTTAGCCCAATTTCCTGAGGATCATGAGATACAGGTAAAAAGACTTGCTCAATTATGGATTGCAGAAGGGTTTATAACTTCAACGACAGAAATGCATGTTTCAGGGGAAAGTTTGGAAGAAATGTCATATAGCTGCTTAGTTGAATTGGTGGAGAGATCTATGGTTCAAGTTGTAGAATATGGTTTAAGTGGGAAGGTGAAAACTTGCCGTCTCCATGATTTTATGCGAGACTTCTGCTTGCAAAAGGCAGAAGAGGAGATTTTTTTCCGAATTATTAACTTTTCTGCAGGACTGGTATCTAAGACAGCCCCAATTGGCAAGGTTCGAAGACTTGCCCTCTATTTGGATGAGAATGTGAAATATGATTTTAGTATAGATGGAAGAGATGACCGCATTAGGTCTCTACTATACTTTACCCCAAAAGGGTTTGACCAAAAGTGGAACAAAAAAGTAATGCGATCAGTATTCAATGACTTCAAATTGCTTAGAGTTCTCAAGTTTGAAAATATAGAGAGAGAATTTCAGTTACCGAAAACGATTGGGAATCTAGTCCACTTGAGGTTTCTGAGTCTGAAGCACAGTGCATATCGTGGATTGCCATCATCTGTATCTAAGCTGGTACTTTTGCAAACTCTAGATCTGCGGTATAATTATTATTTATATGAAGGATCTTGTTTTGGTCGGGAGAGGGCAACCAGAATCAGAAATGTGTTTTGGAATATGGAGCAACTGAGGCATTTATATTTACCTTGGCATCACTATATAAGTGAACAGAAACTGTCATTTGCAAGGATGTGCAATTTGCAGACGTTGGGTGATATTTCAATTGAGAAATGTGATTTGAATGATCTTGTTCAGTTAACCAATCTGAAGAAAATATCCATAATTGTATCACAGCCTAGTCACTTGGAAAAGTTCAAGAATATGTTGATATCAAGAAGTATAACATATGAGCATCTTCGATCGCTATCTTTGAAGCTAAATCGAGATGATATTGGGGATATAGCAAGAGATATAGTATTAAGGTGTCCTCATATATACAAGTTGCGACTGCTTGGGAAAATGACTGAGTTTCCAGAAGAGCTCCTGGGCTATCCAAACCTCACCAAGATAACGCTGGTTAGTACAGAACTGAGGTGTGACCAGATAGAACTAGTGAAGATGCTGCCCAAGTTAAGGGTGCTTTACCTGGGTAGTAATGCTTTCAAATCAAAAACAATGGCTTTCCCCCCAGGAGGCTTTCCTCATCTGGAATTTCTTACCCTTAGTTCTTTGTTTATGTTGAACGAATGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGCATATTGAATGGTGCCTACAATTATGGGAAGTTCCAGATGGGCTTCAGCATATTACTACCCTCAAGGAATTAACAATCAACGTGATGACCAGTAGATTCTGCAGTAGGGTTGGGGAAGGAGGAGAGGATTTCTACAAAATTAAACATGTGCCTTCTATTATAATCACAAATATTCAACCGGACTACGAGAAAGACAAGGAGCCAGAAATGGAGGAAGCAGCTGGTGCGTCTCGAGTAGTTGCTGACGACTATGAGGAATCAACTGTGGACGCTCCTCCGCCTCCTGAAGAAAAAACAGAGGAAATACAAGCTGCATCCACTCCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

996

Amino Acids

114.79

Weight (kDa)

7.74

Isoelectric Point (pI)

50.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	13 - 91	2.4e-17	Rx N-terminal domain
NB-ARC	PF00931	173 - 346	2.7e-41	NB-ARC domain
WHD_DRP	PF23559	448 - 522	9.4e-18	Disease resistance protein Winged helix domain
LRR_14	PF23598	594 - 919	2e-33	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	408, 1406, 2825
AasI	GACNNNNNNGTC	1 cut(s)	376
AccB1I	GGYRCC	1 cut(s)	2676
AccI	GTMKAC	2 cut(s)	1159, 1209
AccIII	TCCGGA	1 cut(s)	602
AciI	CCGC	4 cut(s)	597, 1723, 1975, 2942
AclWI	GGATC	3 cut(s)	124, 1359, 2008
AcsI	RAATTY	4 cut(s)	765, 871, 1850, 2585
AcuI	CTGAAG	7 cut(s)	27, 51, 1925, 2222, 2639, 2693, 2970
AfaI	GTAC	6 cut(s)	183, 280, 1107, 1191, 1953, 2458
AfiI	CCNNNNNNNGG	4 cut(s)	1675, 1755, 2508, 2567
AflIII	ACRYGT	1 cut(s)	2809
AhlI	ACTAGT	2 cut(s)	535, 2485
AjnI	CCWGG	6 cut(s)	45, 132, 263, 2418, 2520, 2563
AjuI	GAANNNNNNNTTGG	2 cut(s)	2029, 2061
Alw21I	GWGCWC	1 cut(s)	2418
Alw26I	GTCTC	8 cut(s)	45, 384, 549, 1041, 1547, 1554, 1737, 2898
AlwI	GGATC	3 cut(s)	124, 1359, 2008
AlwNI	CAGNNNCTG	1 cut(s)	2110
Ama87I	CYCGRG	1 cut(s)	2895
Aor13HI	TCCGGA	1 cut(s)	602
ApeKI	GCWGC	5 cut(s)	212, 1464, 2497, 2882, 2975
ApoI	RAATTY	4 cut(s)	765, 871, 1850, 2585
AspS9I	GGNCC	1 cut(s)	348
AsuHPI	GGTGA	6 cut(s)	443, 560, 562, 1540, 2159, 2428
AsuII	TTCGAA	1 cut(s)	1657
AvaI	CYCGRG	1 cut(s)	2895
AvaII	GGWCC	1 cut(s)	348
AxyI	CCTNAGG	1 cut(s)	1347
BanI	GGYRCC	1 cut(s)	2676
BanII	GRGCYC	1 cut(s)	2418
BarI	GAAGNNNNNNTAC	2 cut(s)	165, 197
BbsI	GAAGAC	3 cut(s)	1142, 1666, 2645
Bbv12I	GWGCWC	1 cut(s)	2418
BbvI	GCAGC	5 cut(s)	199, 1451, 2484, 2894, 2962
BccI	CCATC	6 cut(s)	586, 1139, 1312, 1703, 1939, 2696
BceAI	ACGGC	1 cut(s)	1524
BcgI	CGANNNNNNTGC	4 cut(s)	1405, 1439, 1548, 1582
BciT130I	CCWGG	6 cut(s)	47, 134, 265, 2420, 2522, 2565
BciVI	GTATCC	2 cut(s)	821, 1177
BclI	TGATCA	1 cut(s)	970
BcoDI	GTCTC	8 cut(s)	45, 384, 549, 1041, 1547, 1554, 1737, 2898
BcuI	ACTAGT	2 cut(s)	535, 2485
BfaI	CTAG	7 cut(s)	464, 536, 1880, 1967, 2232, 2486, 2649
BfmI	CTRYAG	4 cut(s)	747, 805, 1617, 2764
BfuI	GTATCC	2 cut(s)	821, 1177
BglII	AGATCT	2 cut(s)	1487, 1969
BisI	GCNGC	6 cut(s)	213, 598, 1465, 2498, 2883, 2976
BlsI	GCNGC	6 cut(s)	214, 599, 1466, 2499, 2884, 2977
BmcAI	AGTACT	1 cut(s)	1191
Bme1390I	CCNGG	6 cut(s)	47, 134, 265, 2420, 2522, 2565
Bme18I	GGWCC	1 cut(s)	348
BmeT110I	CYCGRG	1 cut(s)	2895
BmgT120I	GGNCC	1 cut(s)	348
BmiI	GGNNCC	4 cut(s)	349, 601, 2678, 2865
BmrFI	CCNGG	6 cut(s)	47, 134, 265, 2420, 2522, 2565
BpiI	GAAGAC	3 cut(s)	1142, 1666, 2645
Bpu14I	TTCGAA	1 cut(s)	1657
BpuEI	CTTGAG	5 cut(s)	100, 843, 1811, 1909, 2711
Bsa29I	ATCGAT	1 cut(s)	334
BsaBI	GATNNNNATC	2 cut(s)	1930, 2299
BsaI	GGTCTC	2 cut(s)	1041, 1737
BsaJI	CCNNGG	7 cut(s)	45, 46, 133, 2081, 2419, 2521, 2563
BsaWI	WCCGGW	2 cut(s)	602, 2842
BsaXI	ACNNNNNCTCC	4 cut(s)	262, 267, 292, 297
Bsc4I	CCNNNNNNNGG	4 cut(s)	1675, 1755, 2508, 2567
Bse1I	ACTGG	2 cut(s)	1629, 2754
Bse21I	CCTNAGG	1 cut(s)	1347
Bse8I	GATNNNNATC	2 cut(s)	1930, 2299
BseAI	TCCGGA	1 cut(s)	602
BseBI	CCWGG	6 cut(s)	47, 134, 265, 2420, 2522, 2565
BseCI	ATCGAT	1 cut(s)	334
BseDI	CCNNGG	7 cut(s)	45, 46, 133, 2081, 2419, 2521, 2563
BseJI	GATNNNNATC	2 cut(s)	1930, 2299
BseLI	CCNNNNNNNGG	4 cut(s)	1675, 1755, 2508, 2567
BseMII	CTCAG	7 cut(s)	157, 377, 1338, 1889, 2054, 2391, 2456
BseNI	ACTGG	2 cut(s)	1629, 2754
BseRI	GAGGAG	5 cut(s)	283, 288, 1601, 2799, 2928
BseXI	GCAGC	5 cut(s)	199, 1451, 2484, 2894, 2962
Bsh1285I	CGRYCG	1 cut(s)	2297
BshNI	GGYRCC	1 cut(s)	2676
BshVI	ATCGAT	1 cut(s)	334
BsiEI	CGRYCG	1 cut(s)	2297
BsiHKAI	GWGCWC	1 cut(s)	2418
BsiHKCI	CYCGRG	1 cut(s)	2895
BsiSI	CCGG	3 cut(s)	603, 916, 2843
BslI	CCNNNNNNNGG	4 cut(s)	1675, 1755, 2508, 2567
BsmAI	GTCTC	8 cut(s)	45, 384, 549, 1041, 1547, 1554, 1737, 2898
BsmBI	CGTCTC	3 cut(s)	549, 1547, 2898
Bso31I	GGTCTC	2 cut(s)	1041, 1737
BsoBI	CYCGRG	1 cut(s)	2895
Bsp119I	TTCGAA	1 cut(s)	1657
Bsp1286I	GDGCHC	1 cut(s)	2418
Bsp13I	TCCGGA	1 cut(s)	602
Bsp143I	GATC	9 cut(s)	129, 970, 1351, 1487, 1790, 1969, 2000, 2179, 2294
BspACI	CCGC	4 cut(s)	597, 1723, 1975, 2942
BspCNI	CTCAG	7 cut(s)	156, 378, 1339, 1890, 2055, 2392, 2457
BspDI	ATCGAT	1 cut(s)	334
BspEI	TCCGGA	1 cut(s)	602
BspHI	TCATGA	2 cut(s)	487, 1354
BspLI	GGNNCC	4 cut(s)	349, 601, 2678, 2865
BspMAI	CTGCAG	2 cut(s)	1621, 2768
BspPI	GGATC	3 cut(s)	124, 1359, 2008
BspQI	GCTCTTC	1 cut(s)	2406
BspT104I	TTCGAA	1 cut(s)	1657
BspT107I	GGYRCC	1 cut(s)	2676
BspTNI	GGTCTC	2 cut(s)	1041, 1737
BsrI	ACTGG	2 cut(s)	1629, 2754
BssECI	CCNNGG	7 cut(s)	45, 46, 133, 2081, 2419, 2521, 2563
BssMI	GATC	9 cut(s)	129, 970, 1351, 1487, 1790, 1969, 2000, 2179, 2294
BssNAI	GTATAC	1 cut(s)	1210
BssT1I	CCWWGG	1 cut(s)	2081
Bst1107I	GTATAC	1 cut(s)	1210
Bst2UI	CCWGG	6 cut(s)	47, 134, 265, 2420, 2522, 2565
Bst4CI	ACNGT	7 cut(s)	283, 378, 572, 1189, 1913, 2112, 2929
Bst6I	CTCTTC	6 cut(s)	168, 711, 1039, 1578, 1708, 2406
BstAPI	GCANNNNNTGC	1 cut(s)	2888
BstBI	TTCGAA	1 cut(s)	1657
BstC8I	GCNNGC	7 cut(s)	69, 108, 310, 451, 957, 1143, 1571
BstKTI	GATC	9 cut(s)	132, 973, 1354, 1490, 1793, 1972, 2003, 2182, 2297
BstMAI	GTCTC	8 cut(s)	45, 384, 549, 1041, 1547, 1554, 1737, 2898
BstMBI	GATC	9 cut(s)	129, 970, 1351, 1487, 1790, 1969, 2000, 2179, 2294
BstMCI	CGRYCG	1 cut(s)	2297
BstMWI	GCNNNNNNNGC	3 cut(s)	956, 2065, 2888
BstNI	CCWGG	6 cut(s)	47, 134, 265, 2420, 2522, 2565
BstNSI	RCATGY	2 cut(s)	1430, 2813
BstSCI	CCNGG	6 cut(s)	45, 132, 263, 2418, 2520, 2563
BstSFI	CTRYAG	4 cut(s)	747, 805, 1617, 2764
BstV1I	GCAGC	5 cut(s)	199, 1451, 2484, 2894, 2962
BstV2I	GAAGAC	3 cut(s)	1142, 1666, 2645
BstX2I	RGATCY	3 cut(s)	1487, 1969, 2000
BstYI	RGATCY	3 cut(s)	1487, 1969, 2000
BstZ17I	GTATAC	1 cut(s)	1210
Bsu15I	ATCGAT	1 cut(s)	334
Bsu36I	CCTNAGG	1 cut(s)	1347
BsuI	GTATCC	2 cut(s)	821, 1177
BsuTUI	ATCGAT	1 cut(s)	334
BtsIMutI	CAGTG	3 cut(s)	234, 1141, 1918
Cac8I	GCNNGC	7 cut(s)	69, 108, 310, 451, 957, 1143, 1571
CaiI	CAGNNNCTG	1 cut(s)	2110
CciI	TCATGA	2 cut(s)	487, 1354
Cfr13I	GGNCC	1 cut(s)	348
ClaI	ATCGAT	1 cut(s)	334
CseI	GACGC	4 cut(s)	554, 641, 2880, 2942
Csp6I	GTAC	6 cut(s)	182, 279, 1106, 1190, 1952, 2457
CviAII	CATG	6 cut(s)	488, 1355, 1427, 1547, 2644, 2810
CviQI	GTAC	6 cut(s)	182, 279, 1106, 1190, 1952, 2457
DpnI	GATC	9 cut(s)	131, 972, 1353, 1489, 1792, 1971, 2002, 2181, 2296
DpnII	GATC	9 cut(s)	129, 970, 1351, 1487, 1790, 1969, 2000, 2179, 2294
DrdI	GACNNNNNNGTC	1 cut(s)	376
DseDI	GACNNNNNNGTC	1 cut(s)	376
Eam1104I	CTCTTC	6 cut(s)	168, 711, 1039, 1578, 1708, 2406
EarI	CTCTTC	6 cut(s)	168, 711, 1039, 1578, 1708, 2406
EciI	GGCGGA	1 cut(s)	2931
Ecl136II	GAGCTC	1 cut(s)	2416
Eco130I	CCWWGG	1 cut(s)	2081
Eco24I	GRGCYC	1 cut(s)	2418
Eco31I	GGTCTC	2 cut(s)	1041, 1737
Eco32I	GATATC	1 cut(s)	2265
Eco47I	GGWCC	1 cut(s)	348
Eco53kI	GAGCTC	1 cut(s)	2416
Eco57I	CTGAAG	7 cut(s)	27, 51, 1925, 2222, 2639, 2693, 2970
Eco81I	CCTNAGG	1 cut(s)	1347
Eco88I	CYCGRG	1 cut(s)	2895
EcoICRI	GAGCTC	1 cut(s)	2416
EcoRI	GAATTC	1 cut(s)	871
EcoRII	CCWGG	6 cut(s)	45, 132, 263, 2418, 2520, 2563
EcoRV	GATATC	1 cut(s)	2265
EcoT14I	CCWWGG	1 cut(s)	2081
EcoT22I	ATGCAT	1 cut(s)	1428
EcoT38I	GRGCYC	1 cut(s)	2418
ErhI	CCWWGG	1 cut(s)	2081
Esp3I	CGTCTC	3 cut(s)	549, 1547, 2898
FaeI	CATG	6 cut(s)	491, 1358, 1430, 1550, 2647, 2813
FalI	AAGNNNNNCTT	6 cut(s)	90, 122, 427, 459, 618, 650
FatI	CATG	6 cut(s)	487, 1354, 1426, 1546, 2643, 2809
FauNDI	CATATG	3 cut(s)	851, 1037, 2281
FbaI	TGATCA	1 cut(s)	970
FblI	GTMKAC	2 cut(s)	1159, 1209
Fnu4HI	GCNGC	6 cut(s)	213, 598, 1465, 2498, 2883, 2976
FriOI	GRGCYC	1 cut(s)	2418
Fsp4HI	GCNGC	6 cut(s)	213, 598, 1465, 2498, 2883, 2976
FspBI	CTAG	7 cut(s)	464, 536, 1880, 1967, 2232, 2486, 2649
GluI	GCNGC	6 cut(s)	213, 598, 1465, 2498, 2883, 2976
HapII	CCGG	3 cut(s)	603, 916, 2843
HgaI	GACGC	4 cut(s)	554, 641, 2880, 2942
Hin1II	CATG	6 cut(s)	491, 1358, 1430, 1550, 2647, 2813
HincII	GTYRAC	1 cut(s)	2193
HindII	GTYRAC	1 cut(s)	2193
HpaI	GTTAAC	1 cut(s)	2193
HpaII	CCGG	3 cut(s)	603, 916, 2843
HphI	GGTGA	6 cut(s)	443, 560, 562, 1540, 2159, 2428
Hpy166II	GTNNAC	6 cut(s)	1160, 1210, 1885, 2102, 2193, 2932
Hpy188I	TCNGA	9 cut(s)	146, 352, 387, 1601, 1899, 1905, 2036, 2202, 2658
Hpy8I	GTNNAC	6 cut(s)	1160, 1210, 1885, 2102, 2193, 2932
HpyAV	CCTTC	8 cut(s)	26, 317, 692, 1391, 1519, 1991, 2774, 2826
HpyCH4III	ACNGT	7 cut(s)	283, 378, 572, 1189, 1913, 2112, 2929
HpyCH4IV	ACGT	2 cut(s)	2141, 2745
HpyF10VI	GCNNNNNNNGC	3 cut(s)	956, 2065, 2888
HpySE526I	ACGT	2 cut(s)	2141, 2745
Hsp92II	CATG	6 cut(s)	491, 1358, 1430, 1550, 2647, 2813
Kpn2I	TCCGGA	1 cut(s)	602
Ksp22I	TGATCA	1 cut(s)	970
KspAI	GTTAAC	1 cut(s)	2193
Kzo9I	GATC	9 cut(s)	129, 970, 1351, 1487, 1790, 1969, 2000, 2179, 2294
LguI	GCTCTTC	1 cut(s)	2406
LmnI	GCTCC	5 cut(s)	605, 2056, 2421, 2863, 2941
Lsp1109I	GCAGC	5 cut(s)	199, 1451, 2484, 2894, 2962
MaeI	CTAG	7 cut(s)	464, 536, 1880, 1967, 2232, 2486, 2649
MaeII	ACGT	2 cut(s)	2141, 2745
MaeIII	GTNAC	5 cut(s)	232, 566, 1857, 2234, 2471
MalI	GATC	9 cut(s)	131, 972, 1353, 1489, 1792, 1971, 2002, 2181, 2296
MboI	GATC	9 cut(s)	129, 970, 1351, 1487, 1790, 1969, 2000, 2179, 2294
MfeI	CAATTG	2 cut(s)	1644, 2157
MflI	RGATCY	3 cut(s)	1487, 1969, 2000
MhlI	GDGCHC	1 cut(s)	2418
MlyI	GAGTC	3 cut(s)	96, 850, 1909
MmeI	TCCRAC	2 cut(s)	495, 838
Mph1103I	ATGCAT	1 cut(s)	1428
MroI	TCCGGA	1 cut(s)	602
MslI	CAYNNNNRTG	1 cut(s)	1136
MspA1I	CMGCKG	1 cut(s)	2885
MspI	CCGG	3 cut(s)	603, 916, 2843
MspR9I	CCNGG	6 cut(s)	47, 134, 265, 2420, 2522, 2565
MunI	CAATTG	2 cut(s)	1644, 2157
MvaI	CCWGG	6 cut(s)	47, 134, 265, 2420, 2522, 2565
MwoI	GCNNNNNNNGC	3 cut(s)	956, 2065, 2888
NdeI	CATATG	3 cut(s)	851, 1037, 2281
NdeII	GATC	9 cut(s)	129, 970, 1351, 1487, 1790, 1969, 2000, 2179, 2294
NlaIII	CATG	6 cut(s)	491, 1358, 1430, 1550, 2647, 2813
NlaIV	GGNNCC	4 cut(s)	349, 601, 2678, 2865
NmuCI	GTSAC	4 cut(s)	232, 566, 2234, 2471
NsiI	ATGCAT	1 cut(s)	1428
NspI	RCATGY	2 cut(s)	1430, 2813
NspV	TTCGAA	1 cut(s)	1657
PacI	TTAATTAA	1 cut(s)	729
PaeR7I	CTCGAG	1 cut(s)	2895
PagI	TCATGA	2 cut(s)	487, 1354
PasI	CCCWGGG	1 cut(s)	46
PciI	ACATGT	1 cut(s)	2809
PciSI	GCTCTTC	1 cut(s)	2406
PfeI	GAWTC	7 cut(s)	239, 888, 1085, 1876, 2031, 2760, 2921
PfoI	TCCNGGA	1 cut(s)	263
PkrI	GCNGC	6 cut(s)	214, 599, 1466, 2499, 2884, 2977
Ple19I	CGATCG	1 cut(s)	2297
PleI	GAGTC	3 cut(s)	95, 850, 1908
PpsI	GAGTC	3 cut(s)	95, 850, 1908
PscI	ACATGT	1 cut(s)	2809
PsiI	TTATAA	3 cut(s)	408, 1406, 2825
Psp124BI	GAGCTC	1 cut(s)	2418
Psp6I	CCWGG	6 cut(s)	45, 132, 263, 2418, 2520, 2563
PspGI	CCWGG	6 cut(s)	45, 132, 263, 2418, 2520, 2563
PspN4I	GGNNCC	4 cut(s)	349, 601, 2678, 2865
PspPI	GGNCC	1 cut(s)	348
PstI	CTGCAG	2 cut(s)	1621, 2768
PstNI	CAGNNNCTG	1 cut(s)	2110
PsuI	RGATCY	3 cut(s)	1487, 1969, 2000
PvuI	CGATCG	1 cut(s)	2297
PvuII	CAGCTG	1 cut(s)	2885
RsaI	GTAC	6 cut(s)	183, 280, 1107, 1191, 1953, 2458
RsaNI	GTAC	6 cut(s)	182, 279, 1106, 1190, 1952, 2457
RseI	CAYNNNNRTG	1 cut(s)	1136
SacI	GAGCTC	1 cut(s)	2418
SapI	GCTCTTC	1 cut(s)	2406
SatI	GCNGC	6 cut(s)	213, 598, 1465, 2498, 2883, 2976
Sau3AI	GATC	9 cut(s)	129, 970, 1351, 1487, 1790, 1969, 2000, 2179, 2294
Sau96I	GGNCC	1 cut(s)	348
ScaI	AGTACT	1 cut(s)	1191
SchI	GAGTC	3 cut(s)	96, 850, 1909
ScrFI	CCNGG	6 cut(s)	47, 134, 265, 2420, 2522, 2565
SduI	GDGCHC	1 cut(s)	2418
SfcI	CTRYAG	4 cut(s)	747, 805, 1617, 2764
Sfr274I	CTCGAG	1 cut(s)	2895
SfuI	TTCGAA	1 cut(s)	1657
SinI	GGWCC	1 cut(s)	348
SlaI	CTCGAG	1 cut(s)	2895
SmiMI	CAYNNNNRTG	1 cut(s)	1136
SmlI	CTYRAG	6 cut(s)	79, 858, 1826, 1888, 2726, 2895
SmoI	CTYRAG	6 cut(s)	79, 858, 1826, 1888, 2726, 2895
SpeI	ACTAGT	2 cut(s)	535, 2485
SsiI	CCGC	4 cut(s)	597, 1723, 1975, 2942
SspI	AATATT	1 cut(s)	2836
SspMI	CTAG	7 cut(s)	464, 536, 1880, 1967, 2232, 2486, 2649
SstI	GAGCTC	1 cut(s)	2418
StyD4I	CCNGG	6 cut(s)	45, 132, 263, 2418, 2520, 2563
StyI	CCWWGG	1 cut(s)	2081
TaaI	ACNGT	7 cut(s)	283, 378, 572, 1189, 1913, 2112, 2929
TaiI	ACGT	2 cut(s)	2144, 2748
TaqI	TCGA	8 cut(s)	334, 392, 843, 875, 1657, 2293, 2317, 2896
TatI	WGTACW	2 cut(s)	1189, 2456
TauI	GCSGC	1 cut(s)	600
TfiI	GAWTC	7 cut(s)	239, 888, 1085, 1876, 2031, 2760, 2921
TscAI	CASTG	3 cut(s)	241, 1141, 1918
TseFI	GTSAC	4 cut(s)	232, 566, 2234, 2471
TseI	GCWGC	5 cut(s)	212, 1464, 2497, 2882, 2975
Tsp45I	GTSAC	4 cut(s)	232, 566, 2234, 2471
TspDTI	ATGAA	8 cut(s)	46, 53, 186, 336, 504, 657, 801, 2010
TspGWI	ACGGA	2 cut(s)	573, 1070
TspRI	CASTG	3 cut(s)	241, 1141, 1918
VpaK11BI	GGWCC	1 cut(s)	348
XapI	RAATTY	4 cut(s)	765, 871, 1850, 2585
XbaI	TCTAGA	1 cut(s)	1966
XceI	RCATGY	2 cut(s)	1430, 2813
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2446
XhoI	CTCGAG	1 cut(s)	2895
XmiI	GTMKAC	2 cut(s)	1159, 1209
XspI	CTAG	7 cut(s)	464, 536, 1880, 1967, 2232, 2486, 2649
ZrmI	AGTACT	1 cut(s)	1191
Zsp2I	ATGCAT	1 cut(s)	1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.