Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000434.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

19283 .. 22663

Gene Structure 3381 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000434.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

atggctgaaggtgttgttacagttgtggctgaagggatcaagcccctcggagagttcatcattcagcaagcgaaattcttgagtggtgtcagctatcaaattgagcttgcgcagattgagctacatttgatccggggatttctaaaagatgcagatacgaggcaacaagatgaagaactagtacgcatttgtgttaaacttatcagagatgctgcttatgacttggaggatgtcattgaatctttttacttgaaagtggcttccaggaggagaggaggtactgtgaagaggattgttctcaaaaggtttgcctgcatctttaatgaaggacttaatcgatacaagattgcgtccgatattgaggatattatgaccaaactttctcatctgaggtcaagtttgcaaagttataacatcaggcaaacaagtggggctgatggtgtcgcttcttcttttaagaggcaacgagaccgaaggctaacttatgctcatcaagttgaaaatcacattgttggcttggaggaaagcacagatgtactggtgaaggagttggtgagagaaggaaagagtcaccgtgttgtttctatttgggggatgggcggctccggaaaaaccactcttgcaaaacaggtttttcttcaaaatgaagttaagcgtcattttgattgttttgcttgggtctgtatatctcaacaatgggaaggaaaggttgtattggaagagattttaatcaaactcacttccccatcaacagagaaaaggaaagaaatttccaaaatgaaaatggatgaaatagcagaggaggtctgtagtatccaacgagaaaagagatgtctggtggtccttgatgacatatggactcaaggggcttggcattcgataaaagctggattcccaatcagtgaggaaaccgagagccggatattacttactactcgcaagaaagaagttgccttgcttgcatccggaaatgatcgtctccaccaacctcaacaattaaatgacaagcaaatctgggaactgtttgaaaagatagccatatgtgaaagcgacaaaacagacttggaagtttataaaaagaagagagaattaggaaagaagatgcttgtacattgttcaggtttgccattagccatcagtgtgcttgctggtcttctaagtagacgagagaaagttgaggagtgggaaacagtacttagaaatgttgatcaatacataatgagaggcacaaatgtccttgaaagagaaaacacaggtgaagagtatggtgtatcgagtgtcttggcattgagttatgatgatttaccatctaacttaaaactctgctttctatacttggcccaatttcctgaggatcatgagatacaggtaacaagattgactcaattatggattgcagaagggtttataacttcaacatcagaaatacagggttcagtggaaataatggaagatgcatcatatggctgcgtaactgaactggtggaaagatctatgattcaagttgtaaaatatggtttaagtgggaaggtgaaaacgttccgtctccatgatctgatgcgggacttgtgcttgcaaaagacaaaagaggagaactttctcggtattattaacttttctgttggtccggtatctaatgcaacactgattggtaaggttcgaagatttgccctctatttggacgaaaatgttaaatatgagttcagtattccagatgggcttcaggagattactaccctcaaggaattaacaattgacgggatgcccaggagattctgcagaagggttgggaaaggaggagaggatttctacaaaatcaaacatgtgccttctcttataatcacaaatacctatgacgactccagagtaagaaacaaaagagcagcagcagtgactctgaccaggaattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

636

Amino Acids

72.6

Weight (kDa)

7.87

Isoelectric Point (pI)

46.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	411, 1074, 1409, 1838
Acc16I	TGCGCA	1 cut(s)	111
AccI	GTMKAC	1 cut(s)	1162
AccIII	TCCGGA	2 cut(s)	605, 965
AciI	CCGC	2 cut(s)	600, 1561
AclI	AACGTT	1 cut(s)	1538
AclWI	GGATC	3 cut(s)	44, 124, 1362
AcsI	RAATTY	2 cut(s)	74, 768
AcuI	CTGAAG	3 cut(s)	27, 51, 1706
AfaI	GTAC	5 cut(s)	183, 280, 537, 1110, 1194
AfiI	CCNNNNNNNGG	2 cut(s)	918, 1678
AflIII	ACRYGT	1 cut(s)	1822
AgsI	TTSAA	8 cut(s)	239, 253, 500, 641, 1028, 1241, 1416, 1502
AhlI	ACTAGT	1 cut(s)	178
AjnI	CCWGG	3 cut(s)	263, 1766, 1901
AluBI	AGCT	4 cut(s)	93, 106, 121, 887
AluI	AGCT	4 cut(s)	93, 106, 121, 887
Alw26I	GTCTC	3 cut(s)	462, 983, 1550
AlwI	GGATC	3 cut(s)	44, 124, 1362
Aor13HI	TCCGGA	2 cut(s)	605, 965
AoxI	GGCC	1 cut(s)	1338
ApeKI	GCWGC	4 cut(s)	212, 1467, 1883, 1886
ApoI	RAATTY	2 cut(s)	74, 768
Asp700I	GAANNNNTTC	1 cut(s)	1538
AspLEI	GCGC	1 cut(s)	112
AspS9I	GGNCC	3 cut(s)	841, 1339, 1625
AsuC2I	CCSGG	1 cut(s)	134
AsuHPI	GGTGA	5 cut(s)	553, 563, 565, 1268, 1543
AsuII	TTCGAA	1 cut(s)	1660
AvaII	GGWCC	2 cut(s)	841, 1625
AxyI	CCTNAGG	1 cut(s)	1350
BarI	GAAGNNNNNNTAC	2 cut(s)	165, 197
BbsI	GAAGAC	1 cut(s)	1145
BbvI	GCAGC	4 cut(s)	199, 1454, 1895, 1898
BccI	CCATC	6 cut(s)	431, 589, 754, 1142, 1315, 1709
BciT130I	CCWGG	3 cut(s)	265, 1768, 1903
BciVI	GTATCC	1 cut(s)	824
BclI	TGATCA	1 cut(s)	1207
BcnI	CCSGG	1 cut(s)	134
BcoDI	GTCTC	3 cut(s)	462, 983, 1550
BcuI	ACTAGT	1 cut(s)	178
BfaI	CTAG	1 cut(s)	179
BfmI	CTRYAG	2 cut(s)	808, 1777
BfuI	GTATCC	1 cut(s)	824
BglII	AGATCT	1 cut(s)	1490
BisI	GCNGC	5 cut(s)	213, 601, 1468, 1884, 1887
BlsI	GCNGC	5 cut(s)	214, 602, 1469, 1885, 1888
BmcAI	AGTACT	1 cut(s)	1194
Bme1390I	CCNGG	4 cut(s)	134, 265, 1768, 1903
Bme18I	GGWCC	2 cut(s)	841, 1625
BmgT120I	GGNCC	3 cut(s)	841, 1339, 1625
BmiI	GGNNCC	1 cut(s)	604
BmrFI	CCNGG	4 cut(s)	134, 265, 1768, 1903
BmsI	GCATC	9 cut(s)	139, 199, 324, 971, 1092, 1444, 1466, 1548, 1752
BpiI	GAAGAC	1 cut(s)	1145
BpmI	CTGGAG	1 cut(s)	1846
Bpu14I	TTCGAA	1 cut(s)	1660
BpuEI	CTTGAG	3 cut(s)	100, 846, 1724
BpuMI	CCSGG	1 cut(s)	134
Bsa29I	ATCGAT	1 cut(s)	337
BsaBI	GATNNNNATC	1 cut(s)	728
BsaI	GGTCTC	1 cut(s)	462
BsaJI	CCNNGG	3 cut(s)	46, 133, 1766
BsaWI	WCCGGW	3 cut(s)	605, 965, 1627
BsaXI	ACNNNNNCTCC	4 cut(s)	262, 267, 292, 297
Bsc4I	CCNNNNNNNGG	2 cut(s)	918, 1678
Bse1I	ACTGG	2 cut(s)	543, 1485
Bse21I	CCTNAGG	1 cut(s)	1350
Bse8I	GATNNNNATC	1 cut(s)	728
BseAI	TCCGGA	2 cut(s)	605, 965
BseBI	CCWGG	3 cut(s)	265, 1768, 1903
BseCI	ATCGAT	1 cut(s)	337
BseDI	CCNNGG	3 cut(s)	46, 133, 1766
BseGI	GGATG	5 cut(s)	235, 600, 793, 962, 1767
BseJI	GATNNNNATC	1 cut(s)	728
BseLI	CCNNNNNNNGG	2 cut(s)	918, 1678
BseMII	CTCAG	2 cut(s)	380, 1341
BseNI	ACTGG	2 cut(s)	543, 1485
BseRI	GAGGAG	6 cut(s)	283, 288, 815, 1193, 1604, 1812
BseXI	GCAGC	4 cut(s)	199, 1454, 1895, 1898
BshFI	GGCC	1 cut(s)	1340
BshVI	ATCGAT	1 cut(s)	337
BsiSI	CCGG	5 cut(s)	133, 606, 919, 966, 1628
BslFI	GGGAC	1 cut(s)	1577
BslI	CCNNNNNNNGG	2 cut(s)	918, 1678
BsmAI	GTCTC	3 cut(s)	462, 983, 1550
BsmBI	CGTCTC	2 cut(s)	983, 1550
BsmFI	GGGAC	1 cut(s)	1577
BsmI	GAATGC	1 cut(s)	874
BsnI	GGCC	1 cut(s)	1340
Bso31I	GGTCTC	1 cut(s)	462
Bsp119I	TTCGAA	1 cut(s)	1660
Bsp13I	TCCGGA	2 cut(s)	605, 965
Bsp1407I	TGTACA	1 cut(s)	1108
Bsp143I	GATC	7 cut(s)	36, 129, 973, 1207, 1354, 1490, 1552
BspACI	CCGC	2 cut(s)	600, 1561
BspANI	GGCC	1 cut(s)	1340
BspCNI	CTCAG	2 cut(s)	381, 1342
BspDI	ATCGAT	1 cut(s)	337
BspEI	TCCGGA	2 cut(s)	605, 965
BspHI	TCATGA	1 cut(s)	1357
BspLI	GGNNCC	1 cut(s)	604
BspMAI	CTGCAG	1 cut(s)	1781
BspPI	GGATC	3 cut(s)	44, 124, 1362
BspT104I	TTCGAA	1 cut(s)	1660
BspTNI	GGTCTC	1 cut(s)	462
BsrGI	TGTACA	1 cut(s)	1108
BsrI	ACTGG	2 cut(s)	543, 1485
BssECI	CCNNGG	3 cut(s)	46, 133, 1766
BssMI	GATC	7 cut(s)	36, 129, 973, 1207, 1354, 1490, 1552
Bst2UI	CCWGG	3 cut(s)	265, 1768, 1903
Bst4CI	ACNGT	5 cut(s)	22, 283, 575, 1023, 1192
Bst6I	CTCTTC	4 cut(s)	281, 714, 1076, 1254
BstAUI	TGTACA	1 cut(s)	1108
BstBI	TTCGAA	1 cut(s)	1660
BstC8I	GCNNGC	6 cut(s)	69, 108, 313, 960, 1146, 1574
BstDEI	CTNAG	4 cut(s)	389, 1157, 1196, 1350
BstF5I	GGATG	5 cut(s)	235, 600, 793, 962, 1767
BstHHI	GCGC	1 cut(s)	112
BstKTI	GATC	7 cut(s)	39, 132, 976, 1210, 1357, 1493, 1555
BstMAI	GTCTC	3 cut(s)	462, 983, 1550
BstMBI	GATC	7 cut(s)	36, 129, 973, 1207, 1354, 1490, 1552
BstMWI	GCNNNNNNNGC	2 cut(s)	118, 959
BstNI	CCWGG	3 cut(s)	265, 1768, 1903
BstNSI	RCATGY	1 cut(s)	1826
BstSCI	CCNGG	4 cut(s)	132, 263, 1766, 1901
BstSFI	CTRYAG	2 cut(s)	808, 1777
BstV1I	GCAGC	4 cut(s)	199, 1454, 1895, 1898
BstV2I	GAAGAC	1 cut(s)	1145
BstX2I	RGATCY	1 cut(s)	1490
BstYI	RGATCY	1 cut(s)	1490
Bsu15I	ATCGAT	1 cut(s)	337
Bsu36I	CCTNAGG	1 cut(s)	1350
BsuI	GTATCC	1 cut(s)	824
BsuRI	GGCC	1 cut(s)	1340
BsuTUI	ATCGAT	1 cut(s)	337
BtsCI	GGATG	5 cut(s)	235, 600, 793, 962, 1767
BtsI	GCAGTG	1 cut(s)	1896
BtsIMutI	CAGTG	5 cut(s)	907, 1144, 1443, 1643, 1896
Cac8I	GCNNGC	6 cut(s)	69, 108, 313, 960, 1146, 1574
CciI	TCATGA	1 cut(s)	1357
CfoI	GCGC	1 cut(s)	112
Cfr13I	GGNCC	3 cut(s)	841, 1339, 1625
ClaI	ATCGAT	1 cut(s)	337
CseI	GACGC	2 cut(s)	339, 644
Csp6I	GTAC	5 cut(s)	182, 279, 536, 1109, 1193
CviAII	CATG	3 cut(s)	1358, 1550, 1823
CviQI	GTAC	5 cut(s)	182, 279, 536, 1109, 1193
DdeI	CTNAG	4 cut(s)	389, 1157, 1196, 1350
DpnI	GATC	7 cut(s)	38, 131, 975, 1209, 1356, 1492, 1554
DpnII	GATC	7 cut(s)	36, 129, 973, 1207, 1354, 1490, 1552
Eam1104I	CTCTTC	4 cut(s)	281, 714, 1076, 1254
EarI	CTCTTC	4 cut(s)	281, 714, 1076, 1254
Eco31I	GGTCTC	1 cut(s)	462
Eco47I	GGWCC	2 cut(s)	841, 1625
Eco57I	CTGAAG	3 cut(s)	27, 51, 1706
Eco81I	CCTNAGG	1 cut(s)	1350
EcoRII	CCWGG	3 cut(s)	263, 1766, 1901
EcoT22I	ATGCAT	1 cut(s)	1459
Esp3I	CGTCTC	2 cut(s)	983, 1550
FaeI	CATG	3 cut(s)	1361, 1553, 1826
FalI	AAGNNNNNCTT	2 cut(s)	466, 498
FaqI	GGGAC	1 cut(s)	1577
FatI	CATG	3 cut(s)	1357, 1549, 1822
FauI	CCCGC	1 cut(s)	1554
FauNDI	CATATG	3 cut(s)	854, 1040, 1462
FbaI	TGATCA	1 cut(s)	1207
FblI	GTMKAC	1 cut(s)	1162
Fnu4HI	GCNGC	5 cut(s)	213, 601, 1468, 1884, 1887
FokI	GGATG	5 cut(s)	242, 607, 800, 949, 1774
Fsp4HI	GCNGC	5 cut(s)	213, 601, 1468, 1884, 1887
FspBI	CTAG	1 cut(s)	179
FspI	TGCGCA	1 cut(s)	111
GlaI	GCGC	1 cut(s)	111
GluI	GCNGC	5 cut(s)	213, 601, 1468, 1884, 1887
GsuI	CTGGAG	1 cut(s)	1846
HaeIII	GGCC	1 cut(s)	1340
HapII	CCGG	5 cut(s)	133, 606, 919, 966, 1628
HgaI	GACGC	2 cut(s)	339, 644
HhaI	GCGC	1 cut(s)	112
Hin1II	CATG	3 cut(s)	1361, 1553, 1826
Hin6I	GCGC	1 cut(s)	110
HinP1I	GCGC	1 cut(s)	110
HinfI	GANTC	9 cut(s)	239, 568, 859, 891, 1381, 1498, 1773, 1859, 1894
HpaII	CCGG	5 cut(s)	133, 606, 919, 966, 1628
HphI	GGTGA	5 cut(s)	553, 563, 565, 1268, 1543
Hpy166II	GTNNAC	1 cut(s)	1163
Hpy188I	TCNGA	7 cut(s)	50, 206, 355, 390, 1423, 1557, 1899
Hpy188III	TCNNGA	8 cut(s)	79, 606, 966, 1349, 1358, 1712, 1724, 1863
Hpy8I	GTNNAC	1 cut(s)	1163
HpyCH4III	ACNGT	5 cut(s)	22, 283, 575, 1023, 1192
HpyCH4IV	ACGT	1 cut(s)	1538
HpyF10VI	GCNNNNNNNGC	2 cut(s)	118, 959
HpyF3I	CTNAG	4 cut(s)	389, 1157, 1196, 1350
HpySE526I	ACGT	1 cut(s)	1538
Hsp92II	CATG	3 cut(s)	1361, 1553, 1826
HspAI	GCGC	1 cut(s)	110
Kpn2I	TCCGGA	2 cut(s)	605, 965
Ksp22I	TGATCA	1 cut(s)	1207
Kzo9I	GATC	7 cut(s)	36, 129, 973, 1207, 1354, 1490, 1552
LmnI	GCTCC	1 cut(s)	608
Lsp1109I	GCAGC	4 cut(s)	199, 1454, 1895, 1898
LweI	GCATC	9 cut(s)	139, 199, 324, 971, 1092, 1444, 1466, 1548, 1752
MaeI	CTAG	1 cut(s)	179
MaeII	ACGT	1 cut(s)	1538
MaeIII	GTNAC	5 cut(s)	16, 569, 1369, 1471, 1891
MalI	GATC	7 cut(s)	38, 131, 975, 1209, 1356, 1492, 1554
MboI	GATC	7 cut(s)	36, 129, 973, 1207, 1354, 1490, 1552
MfeI	CAATTG	1 cut(s)	1752
MflI	RGATCY	1 cut(s)	1490
MlyI	GAGTC	5 cut(s)	577, 853, 1375, 1853, 1888
MmeI	TCCRAC	1 cut(s)	841
Mph1103I	ATGCAT	1 cut(s)	1459
MroI	TCCGGA	2 cut(s)	605, 965
MroXI	GAANNNNTTC	1 cut(s)	1538
MslI	CAYNNNNRTG	1 cut(s)	1139
MspI	CCGG	5 cut(s)	133, 606, 919, 966, 1628
MspR9I	CCNGG	4 cut(s)	134, 265, 1768, 1903
MunI	CAATTG	1 cut(s)	1752
Mva1269I	GAATGC	1 cut(s)	874
MvaI	CCWGG	3 cut(s)	265, 1768, 1903
MwoI	GCNNNNNNNGC	2 cut(s)	118, 959
NciI	CCSGG	1 cut(s)	134
NdeI	CATATG	3 cut(s)	854, 1040, 1462
NdeII	GATC	7 cut(s)	36, 129, 973, 1207, 1354, 1490, 1552
NlaIII	CATG	3 cut(s)	1361, 1553, 1826
NlaIV	GGNNCC	1 cut(s)	604
NmuCI	GTSAC	2 cut(s)	569, 1891
NsbI	TGCGCA	1 cut(s)	111
NsiI	ATGCAT	1 cut(s)	1459
NspI	RCATGY	1 cut(s)	1826
NspV	TTCGAA	1 cut(s)	1660
PagI	TCATGA	1 cut(s)	1357
PciI	ACATGT	1 cut(s)	1822
PctI	GAATGC	1 cut(s)	874
PdmI	GAANNNNTTC	1 cut(s)	1538
PfeI	GAWTC	4 cut(s)	239, 891, 1498, 1773
PfoI	TCCNGGA	1 cut(s)	263
PkrI	GCNGC	5 cut(s)	214, 602, 1469, 1885, 1888
PleI	GAGTC	5 cut(s)	576, 853, 1375, 1853, 1888
PpsI	GAGTC	5 cut(s)	576, 853, 1375, 1853, 1888
PscI	ACATGT	1 cut(s)	1822
PsiI	TTATAA	4 cut(s)	411, 1074, 1409, 1838
Psp1406I	AACGTT	1 cut(s)	1538
Psp6I	CCWGG	3 cut(s)	263, 1766, 1901
PspGI	CCWGG	3 cut(s)	263, 1766, 1901
PspN4I	GGNNCC	1 cut(s)	604
PspPI	GGNCC	3 cut(s)	841, 1339, 1625
PstI	CTGCAG	1 cut(s)	1781
PsuI	RGATCY	1 cut(s)	1490
RsaI	GTAC	5 cut(s)	183, 280, 537, 1110, 1194
RsaNI	GTAC	5 cut(s)	182, 279, 536, 1109, 1193
RseI	CAYNNNNRTG	1 cut(s)	1139
SatI	GCNGC	5 cut(s)	213, 601, 1468, 1884, 1887
Sau3AI	GATC	7 cut(s)	36, 129, 973, 1207, 1354, 1490, 1552
Sau96I	GGNCC	3 cut(s)	841, 1339, 1625
ScaI	AGTACT	1 cut(s)	1194
SchI	GAGTC	5 cut(s)	577, 853, 1375, 1853, 1888
ScrFI	CCNGG	4 cut(s)	134, 265, 1768, 1903
SfaNI	GCATC	9 cut(s)	139, 199, 324, 971, 1092, 1444, 1466, 1548, 1752
SfcI	CTRYAG	2 cut(s)	808, 1777
SfuI	TTCGAA	1 cut(s)	1660
SinI	GGWCC	2 cut(s)	841, 1625
SmiMI	CAYNNNNRTG	1 cut(s)	1139
SmlI	CTYRAG	3 cut(s)	79, 861, 1739
SmoI	CTYRAG	3 cut(s)	79, 861, 1739
SpeI	ACTAGT	1 cut(s)	178
SsiI	CCGC	2 cut(s)	600, 1561
SspMI	CTAG	1 cut(s)	179
StyD4I	CCNGG	4 cut(s)	132, 263, 1766, 1901
TaaI	ACNGT	5 cut(s)	22, 283, 575, 1023, 1192
TaiI	ACGT	1 cut(s)	1541
TaqI	TCGA	4 cut(s)	337, 878, 1274, 1660
TaqII	GACCGA	1 cut(s)	486
TatI	WGTACW	3 cut(s)	535, 1108, 1192
TauI	GCSGC	1 cut(s)	603
TfiI	GAWTC	4 cut(s)	239, 891, 1498, 1773
TscAI	CASTG	5 cut(s)	907, 1144, 1443, 1650, 1896
TseFI	GTSAC	2 cut(s)	569, 1891
TseI	GCWGC	4 cut(s)	212, 1467, 1883, 1886
Tsp45I	GTSAC	2 cut(s)	569, 1891
TspDTI	ATGAA	6 cut(s)	46, 186, 339, 660, 794, 804
TspGWI	ACGGA	1 cut(s)	1532
TspRI	CASTG	5 cut(s)	907, 1144, 1443, 1650, 1896
VpaK11BI	GGWCC	2 cut(s)	841, 1625
XapI	RAATTY	2 cut(s)	74, 768
XceI	RCATGY	1 cut(s)	1826
XcmI	CCANNNNNNNNNTGG	1 cut(s)	781
XmiI	GTMKAC	1 cut(s)	1162
XmnI	GAANNNNTTC	1 cut(s)	1538
XspI	CTAG	1 cut(s)	179
ZrmI	AGTACT	1 cut(s)	1194
Zsp2I	ATGCAT	1 cut(s)	1459

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.