RchiOBHm_Chr4g0394341

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
9982031 .. 9987247
5217 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36684

Sequence Viewer

Length: 2847 bp
ATGGCTGAGGCTGTTGTTTCTTTTCTCGTGGAAAGAGTTGGTGACTACATCATTCAAGAAGGCAGATCCTTGTCCGGACTTCGCGATCAAGTTGAGCGTGCACATACAGACCTACTATTCATCAAGGGCTTCCTCAAAGATGCAGACGCAAAGCGACGAGATAGTGAGGCAATACGCATTTTTGTTGCCAGAATTAGAGATGCTGCTTATGATCTGGAGGATGTCATTGAAGCTTTTGTCTTGAAGGTGGATTCCAAGAGGAAAGGAGGTCTGAAGAATGTTTTGAAGAGGTTGGGGTGCATCTTCATTGAAGGAGTTAGTCGTCACAAGATTGGGTTAGAAATTGGGGTAATTACTACCACGATCTCTGATTTGAAGCAGAACTTGCAAACTTATGATATCAAGGAGATAAGGGATTCCTCTACTTCACTCGAATTGTGTGAAAGGCAACAACTACTGAGGCGAACTTACTCTCATGTTCTTGAGCGTAATGTTGTCGGGTTAGAAGATTGTGTACGTGAATTGGTTGGGCATTTGGTGAAGGAAGAGCATCGCCACCGAGTTGTTTCTATTATTGGGATGGGCGGATCTGGGAAGACAACTATTGCTAAACAAGTTTATCATCACAAAGAGGTAACAGACCATTTTGATTGTTTGGCTTGGGTTTGTATATCTCAACAATATCAAGTCAGGGATGTCTTGGAGAGGATATATGTCAAACTTATTTCCCCTACAAAAGAGGAGAGAGAAGAAATCAAAAATTTGAAGGATGACGAAATACCAGGGAGGCTTTCTCGTCTCCAAAATGAAAGAAAATGTTTGATTGTCCTTGATGACATTTGGAAAACAGAGGCCTGGGACTTTTTGAAGGCTGCATTTGAATGCCATGAAGACTCAAAGAGCAGGATACTACTTACGACACGCAATGAACAAGTAGCTTCGCATGCCGATGAGAGCGGTTTTCACTACCGACCTCCAGCACTAAATGAGTCTGAGAGTTGGGAGCTGTTTGAGAAGATTGCAATGAGCGGAAGGAAAGCTGGAATAGGTGCTGAAGTTTACACGAAGATGGAAGAATTAGGAAAAGAGATGGTTCAACATTGTAAGGGTCTGCCACTAGCTATCATTGTACTTGCTGGACTTCTTGCTAGAAAAAACACAATTAAAGATTGGATAAACATACAAGAAAATGTTGGTGTTTACGTAAGTAGAGGTTTTGGTCGCCAGGAAGAAGAACATGCATATGCATCATGGGTGTTGGCGTTGAGTTATGATGACTTGCCGTATCACTTAAAACCCTGTTTCCTATATTTCGGACATTTTCCAGAGGATCATGAGATCCGAGTGAACAGTTTGACAAGATTATGGATTGCAGAAGGTTTTATTTCTTTGACACAACAAAGACAAAGTTCTGGGGAAACAATGGAGAATGTGGCATACAATTGGTTGAATGAGTTGGTAGAAAGGTGTGTGATTCAAGTAGGACAGAGAAGTTCAACTTCTGAGAATATTAAAACTTGCAGGATGCATGATCTTTTGCGAGATTTGTGTTTGAGGAAGGCGGAAGAGGAAAATTTTCTCCAAGTTGTCAAGGGTTCTCATAAAAATGAGGCAATGCATCCAATTTCTTCTTCTTCCTCCACGGTAACCTATGTATCACCAATGGGTAAGTTTCGAAGACTTGCCGTCTACTTGGATGAGAATGATGATAAATTGGTACCCTCACTTGGGGAAAGAGGTGGGCACCTTAGGTCCTTGTTATATTTTGGCCCCAACGATTATCATTGGTTTCCTAAAAGGAAAGAATTGATACCTTCCATGTTCAAGGATTTCAAATTACTCAGAGCGTTGAGGATTGAAGGTATGAATGATAGAGAAGTCGAAATAGAGCTGCCTAGAGAAATTGGAAACATGGTCCACTTGAGGTTTCTGAGTCTAAGGAACAGTAATATAAAATCGTTTCCTCCGTTCCTAGGAAACTTGATTTGTTTGCAGACACTTGATTTCCATGTTAGAAATGACCACATGTTTATCCCAAATGTGATATGCAAGATGAATAAGTTGAGACATTTATACCTGCCATATGATTACACGGCAAGAGGTAAACTGCAGCTATCTACTCTCGGTGATTTGCAAACTTTAAATTCTATTTCGAGTAGACGTTGTGATTTGAATGATCTTGCTAAACTAGGCAATCTAAGGAAACTGAAAATACAATTGTCATCTAGCCAATCGAAAAATCTGGAGAAAATCTTGGATGCGGCAGGCTGCGTGCTCAACGGTATTCGGTCCCTGCGGTTGGACAACGAGGTTGGAATGGAAAGCGGTGCAGAGGTTAGTCAAATAGTTGCAAGGTGCGGTCAAATATACAAGTTGGTGCTGTGGGGGCCCACACTAGAACTACCGAAAGAGTTCCACTCCTATTCAAACCTCACCAACTTACTTTTGTGTCAATGTGCTCTCAAGGGCGACCAAATGGCCTTACTAGAGAAGCTGCCCAACCTGAAAAGTCTTGATCTGTCGGATAATGTGTTTGAGAAAAATACAGAAGTATTGGTTTTCTCCGCTGGAAGCTTTCCTCGTCTTCAGTTTCTTAGACTTACGGATTTGGAAATAAGAGAGTGGAGGGTGGAGGAAGGAGCCATGCCTTGTCTCTGCAAATTGGCCATTGTTCAGTGCAGAGAATTGAGTACGGTTCCAGATGGGCTGAGACACCTTACTACGCTCAAGGAATTGGATATTGTGGGTATGCCTAAACGATTCTGTAGTAAGCTTGAGGAAGGAGGAGAGGACTTCCATAAAGTCCAACACATCCCTTCCCTTATGTTTTATTTTCCGAGGGATTAA

Protein Analysis

948

Amino Acids

108.74

Weight (kDa)

7.01

Isoelectric Point (pI)

46.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 88 4.6e-20 Rx N-terminal domain
NB-ARC PF00931 169 - 344 1.6e-42 NB-ARC domain
WHD_DRP PF23559 441 - 517 4.9e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 597 - 914 3.6e-37 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2085
Acc65I GGTACC 1 cut(s) 1717
AccB1I GGYRCC 2 cut(s) 1717, 1743
AccBSI CCGCTC 2 cut(s) 957, 1029
AccI GTMKAC 2 cut(s) 1689, 2158
AccII CGCG 1 cut(s) 84
AccIII TCCGGA 1 cut(s) 74
AciI CCGC 9 cut(s) 585, 957, 1029, 1562, 2261, 2296, 2325, 2358, 2565
AclWI GGATC 4 cut(s) 60, 595, 1333, 1338
AcoI YGGCCR 1 cut(s) 2664
AcsI RAATTY 3 cut(s) 760, 1573, 2143
AcuI CTGAAG 3 cut(s) 293, 1074, 2570
AfaI GTAC 4 cut(s) 516, 1131, 1719, 2692
AfiI CCNNNNNNNGG 4 cut(s) 1727, 1728, 1973, 2299
AflIII ACRYGT 1 cut(s) 2025
AhdI GACNNNNNGTC 1 cut(s) 1685
AjnI CCWGG 3 cut(s) 781, 854, 1224
AjuI GAANNNNNNNTTGG 2 cut(s) 1615, 1647
Alw21I GWGCWC 3 cut(s) 103, 2277, 2461
Alw26I GTCTC 4 cut(s) 803, 2059, 2657, 2704
Alw44I GTGCAC 1 cut(s) 99
AlwI GGATC 4 cut(s) 60, 595, 1333, 1338
Aor13HI TCCGGA 1 cut(s) 74
AoxI GGCC 5 cut(s) 852, 1768, 2387, 2478, 2664
ApaI GGGCCC 1 cut(s) 2391
ApaLI GTGCAC 1 cut(s) 99
ApeKI GCWGC 6 cut(s) 203, 872, 1891, 2110, 2268, 2494
ApoI RAATTY 3 cut(s) 760, 1573, 2143
Asp700I GAANNNNTTC 2 cut(s) 1575, 2411
Asp718I GGTACC 1 cut(s) 1717
AspA2I CCTAGG 1 cut(s) 1972
AspS9I GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2387, 2388
AsuHPI GGTGA 5 cut(s) 53, 550, 1650, 2138, 2425
AsuII TTCGAA 1 cut(s) 1675
AvaII GGWCC 3 cut(s) 1752, 1915, 2289
AvrII CCTAGG 1 cut(s) 1972
AxyI CCTNAGG 1 cut(s) 1748
BaeGI GKGCMC 3 cut(s) 103, 1746, 2391
BaeI ACNNNNGTAYC 2 cut(s) 1638, 1671
BalI TGGCCA 1 cut(s) 2666
BanI GGYRCC 2 cut(s) 1717, 1743
BanII GRGCYC 1 cut(s) 2391
BarI GAAGNNNNNNTAC 2 cut(s) 498, 530
BauI CACGAG 1 cut(s) 26
BbsI GAAGAC 4 cut(s) 602, 897, 1684, 2576
Bbv12I GWGCWC 3 cut(s) 103, 2277, 2461
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 6 cut(s) 190, 859, 1878, 2122, 2255, 2481
BccI CCATC 4 cut(s) 574, 1063, 1084, 2696
BceAI ACGGC 3 cut(s) 1267, 1670, 2109
BciT130I CCWGG 3 cut(s) 783, 856, 1226
BciVI GTATCC 1 cut(s) 900
BcoDI GTCTC 4 cut(s) 803, 2059, 2657, 2704
BfaI CTAG 8 cut(s) 1118, 1149, 1896, 1973, 2189, 2226, 2396, 2486
BfmI CTRYAG 2 cut(s) 2108, 2764
BfuAI ACCTGC 1 cut(s) 2085
BfuI GTATCC 1 cut(s) 900
BisI GCNGC 7 cut(s) 204, 873, 1892, 2111, 2262, 2269, 2495
BlnI CCTAGG 1 cut(s) 1972
BlsI GCNGC 7 cut(s) 205, 874, 1893, 2112, 2263, 2270, 2496
Bme1390I CCNGG 3 cut(s) 783, 856, 1226
Bme18I GGWCC 3 cut(s) 1752, 1915, 2289
BmeRI GACNNNNNGTC 1 cut(s) 1685
BmgT120I GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2387, 2388
BmiI GGNNCC 8 cut(s) 1719, 1745, 1771, 2291, 2388, 2389, 2641, 2697
BmrFI CCNGG 3 cut(s) 783, 856, 1226
BmsI GCATC 8 cut(s) 130, 190, 309, 559, 1256, 1515, 1627, 2248
BpiI GAAGAC 4 cut(s) 602, 897, 1684, 2576
BplI GAGNNNNNCTC 4 cut(s) 778, 810, 2402, 2434
BpmI CTGGAG 3 cut(s) 236, 960, 2264
Bpu10I CCTNAGC 1 cut(s) 6
Bpu14I TTCGAA 1 cut(s) 1675
BpuEI CTTGAG 5 cut(s) 503, 1942, 2447, 2711, 2795
BsaAI YACGTR 2 cut(s) 518, 1204
BsaJI CCNNGG 5 cut(s) 782, 855, 1641, 1972, 2837
BsaWI WCCGGW 1 cut(s) 74
Bsc4I CCNNNNNNNGG 4 cut(s) 1727, 1728, 1973, 2299
Bse21I CCTNAGG 1 cut(s) 1748
Bse3DI GCAATG 3 cut(s) 931, 1029, 1620
BseAI TCCGGA 1 cut(s) 74
BseBI CCWGG 3 cut(s) 783, 856, 1226
BseDI CCNNGG 5 cut(s) 782, 855, 1641, 1972, 2837
BseGI GGATG 9 cut(s) 226, 585, 700, 775, 1530, 1618, 1702, 2263, 2811
BseLI CCNNNNNNNGG 4 cut(s) 1727, 1728, 1973, 2299
BseMI GCAATG 3 cut(s) 931, 1029, 1620
BseMII CTCAG 6 cut(s) 449, 984, 1494, 1855, 1922, 2699
BseRI GAGGAG 2 cut(s) 755, 2799
BseSI GKGCMC 3 cut(s) 103, 1746, 2391
BseXI GCAGC 6 cut(s) 190, 859, 1878, 2122, 2255, 2481
BsgI GTGCAG 2 cut(s) 2349, 2698
Bsh1236I CGCG 1 cut(s) 84
BshFI GGCC 5 cut(s) 854, 1770, 2389, 2480, 2666
BshNI GGYRCC 2 cut(s) 1717, 1743
BsiHKAI GWGCWC 3 cut(s) 103, 2277, 2461
BsiSI CCGG 1 cut(s) 75
BslFI GGGAC 2 cut(s) 872, 2275
BslI CCNNNNNNNGG 4 cut(s) 1727, 1728, 1973, 2299
BsmAI GTCTC 4 cut(s) 803, 2059, 2657, 2704
BsmBI CGTCTC 1 cut(s) 803
BsmFI GGGAC 2 cut(s) 872, 2275
BsmI GAATGC 1 cut(s) 887
BsnI GGCC 5 cut(s) 854, 1770, 2389, 2480, 2666
Bsp119I TTCGAA 1 cut(s) 1675
Bsp120I GGGCCC 1 cut(s) 2387
Bsp1286I GDGCHC 5 cut(s) 103, 1746, 2277, 2391, 2461
Bsp13I TCCGGA 1 cut(s) 74
Bsp68I TCGCGA 1 cut(s) 84
BspACI CCGC 9 cut(s) 585, 957, 1029, 1562, 2261, 2296, 2325, 2358, 2565
BspANI GGCC 5 cut(s) 854, 1770, 2389, 2480, 2666
BspCNI CTCAG 6 cut(s) 450, 985, 1495, 1854, 1923, 2700
BspEI TCCGGA 1 cut(s) 74
BspFNI CGCG 1 cut(s) 84
BspHI TCATGA 1 cut(s) 1333
BspLI GGNNCC 8 cut(s) 1719, 1745, 1771, 2291, 2388, 2389, 2641, 2697
BspMAI CTGCAG 1 cut(s) 2112
BspMI ACCTGC 1 cut(s) 2085
BspPI GGATC 4 cut(s) 60, 595, 1333, 1338
BspQI GCTCTTC 1 cut(s) 540
BspT104I TTCGAA 1 cut(s) 1675
BspT107I GGYRCC 2 cut(s) 1717, 1743
BsrBI CCGCTC 2 cut(s) 957, 1029
BsrDI GCAATG 3 cut(s) 931, 1029, 1620
BssECI CCNNGG 5 cut(s) 782, 855, 1641, 1972, 2837
BssSI CACGAG 1 cut(s) 26
BssT1I CCWWGG 1 cut(s) 1972
Bst2BI CACGAG 1 cut(s) 26
Bst2UI CCWGG 3 cut(s) 783, 856, 1226
Bst4CI ACNGT 5 cut(s) 1352, 1645, 1946, 2282, 2695
Bst6I CTCTTC 3 cut(s) 281, 540, 1560
BstAPI GCANNNNNTGC 1 cut(s) 385
BstBAI YACGTR 2 cut(s) 518, 1204
BstBI TTCGAA 1 cut(s) 1675
BstC8I GCNNGC 4 cut(s) 99, 945, 2266, 2273
BstDSI CCRYGG 1 cut(s) 1641
BstEII GGTNACC 1 cut(s) 1645
BstF5I GGATG 9 cut(s) 226, 585, 700, 775, 1530, 1618, 1702, 2263, 2811
BstFNI CGCG 1 cut(s) 84
BstMAI GTCTC 4 cut(s) 803, 2059, 2657, 2704
BstMWI GCNNNNNNNGC 3 cut(s) 385, 944, 2386
BstNI CCWGG 3 cut(s) 783, 856, 1226
BstNSI RCATGY 3 cut(s) 947, 1241, 2029
BstPI GGTNACC 1 cut(s) 1645
BstSCI CCNGG 3 cut(s) 781, 854, 1224
BstSFI CTRYAG 2 cut(s) 2108, 2764
BstSLI GKGCMC 3 cut(s) 103, 1746, 2391
BstSNI TACGTA 1 cut(s) 1204
BstUI CGCG 1 cut(s) 84
BstV1I GCAGC 6 cut(s) 190, 859, 1878, 2122, 2255, 2481
BstV2I GAAGAC 4 cut(s) 602, 897, 1684, 2576
BstX2I RGATCY 3 cut(s) 65, 587, 1338
BstYI RGATCY 3 cut(s) 65, 587, 1338
Bsu36I CCTNAGG 1 cut(s) 1748
BsuI GTATCC 1 cut(s) 900
BsuRI GGCC 5 cut(s) 854, 1770, 2389, 2480, 2666
BtgI CCRYGG 1 cut(s) 1641
BtgZI GCGATG 1 cut(s) 536
BtsCI GGATG 9 cut(s) 226, 585, 700, 775, 1530, 1618, 1702, 2263, 2811
BtsIMutI CAGTG 1 cut(s) 2681
BtuMI TCGCGA 1 cut(s) 84
BveI ACCTGC 1 cut(s) 2085
Cac8I GCNNGC 4 cut(s) 99, 945, 2266, 2273
CciI TCATGA 1 cut(s) 1333
Cfr13I GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2387, 2388
CseI GACGC 1 cut(s) 155
Csp6I GTAC 4 cut(s) 515, 1130, 1718, 2691
CviQI GTAC 4 cut(s) 515, 1130, 1718, 2691
DraI TTTAAA 1 cut(s) 2142
DriI GACNNNNNGTC 1 cut(s) 1685
EaeI YGGCCR 1 cut(s) 2664
Eam1104I CTCTTC 3 cut(s) 281, 540, 1560
Eam1105I GACNNNNNGTC 1 cut(s) 1685
EarI CTCTTC 3 cut(s) 281, 540, 1560
EciI GGCGGA 2 cut(s) 600, 1577
Eco105I TACGTA 1 cut(s) 1204
Eco130I CCWWGG 1 cut(s) 1972
Eco147I AGGCCT 1 cut(s) 854
Eco24I GRGCYC 1 cut(s) 2391
Eco32I GATATC 1 cut(s) 400
Eco47I GGWCC 3 cut(s) 1752, 1915, 2289
Eco57I CTGAAG 3 cut(s) 293, 1074, 2570
Eco81I CCTNAGG 1 cut(s) 1748
Eco91I GGTNACC 1 cut(s) 1645
EcoO109I RGGNCCY 2 cut(s) 1752, 2387
EcoO65I GGTNACC 1 cut(s) 1645
EcoRII CCWGG 3 cut(s) 781, 854, 1224
EcoRV GATATC 1 cut(s) 400
EcoT14I CCWWGG 1 cut(s) 1972
EcoT22I ATGCAT 4 cut(s) 1243, 1249, 1530, 1620
EcoT38I GRGCYC 1 cut(s) 2391
ErhI CCWWGG 1 cut(s) 1972
Esp3I CGTCTC 1 cut(s) 803
FalI AAGNNNNNCTT 4 cut(s) 368, 400, 1483, 1515
FaqI GGGAC 2 cut(s) 872, 2275
FauNDI CATATG 2 cut(s) 1243, 2083
FblI GTMKAC 2 cut(s) 1689, 2158
Fnu4HI GCNGC 7 cut(s) 204, 873, 1892, 2111, 2262, 2269, 2495
FokI GGATG 9 cut(s) 233, 592, 707, 782, 1537, 1605, 1709, 2270, 2798
FriOI GRGCYC 1 cut(s) 2391
Fsp4HI GCNGC 7 cut(s) 204, 873, 1892, 2111, 2262, 2269, 2495
FspBI CTAG 8 cut(s) 1118, 1149, 1896, 1973, 2189, 2226, 2396, 2486
GluI GCNGC 7 cut(s) 204, 873, 1892, 2111, 2262, 2269, 2495
GsuI CTGGAG 3 cut(s) 236, 960, 2264
HaeIII GGCC 5 cut(s) 854, 1770, 2389, 2480, 2666
HapII CCGG 1 cut(s) 75
HgaI GACGC 1 cut(s) 155
HindIII AAGCTT 3 cut(s) 231, 2572, 2771
HinfI GANTC 7 cut(s) 251, 416, 893, 989, 1474, 1933, 2760
HpaII CCGG 1 cut(s) 75
HphI GGTGA 5 cut(s) 53, 550, 1650, 2138, 2425
Hpy166II GTNNAC 9 cut(s) 101, 515, 1060, 1201, 1348, 1690, 1918, 2105, 2159
Hpy8I GTNNAC 9 cut(s) 101, 515, 1060, 1201, 1348, 1690, 1918, 2105, 2159
Hpy99I CGWCG 1 cut(s) 159
HpyCH4III ACNGT 5 cut(s) 1352, 1645, 1946, 2282, 2695
HpyCH4IV ACGT 3 cut(s) 517, 1203, 2161
HpyF10VI GCNNNNNNNGC 3 cut(s) 385, 944, 2386
HpySE526I ACGT 3 cut(s) 517, 1203, 2161
Kpn2I TCCGGA 1 cut(s) 74
KpnI GGTACC 1 cut(s) 1721
LguI GCTCTTC 1 cut(s) 540
LmnI GCTCC 2 cut(s) 1003, 2639
Lsp1109I GCAGC 6 cut(s) 190, 859, 1878, 2122, 2255, 2481
LweI GCATC 8 cut(s) 130, 190, 309, 559, 1256, 1515, 1627, 2248
MaeI CTAG 8 cut(s) 1118, 1149, 1896, 1973, 2189, 2226, 2396, 2486
MaeII ACGT 3 cut(s) 517, 1203, 2161
MaeIII GTNAC 4 cut(s) 41, 323, 634, 1645
MbiI CCGCTC 2 cut(s) 957, 1029
MfeI CAATTG 2 cut(s) 1441, 2216
MflI RGATCY 3 cut(s) 65, 587, 1338
MhlI GDGCHC 5 cut(s) 103, 1746, 2277, 2391, 2461
MlsI TGGCCA 1 cut(s) 2666
MluNI TGGCCA 1 cut(s) 2666
MlyI GAGTC 3 cut(s) 887, 998, 1942
MmeI TCCRAC 4 cut(s) 2280, 2293, 2502, 2830
Mox20I TGGCCA 1 cut(s) 2666
Mph1103I ATGCAT 4 cut(s) 1243, 1249, 1530, 1620
MroI TCCGGA 1 cut(s) 74
MroXI GAANNNNTTC 2 cut(s) 1575, 2411
MscI TGGCCA 1 cut(s) 2666
MseI TTAA 5 cut(s) 1164, 1292, 1512, 2141, 2845
MslI CAYNNNNRTG 5 cut(s) 880, 948, 1067, 1242, 1605
Msp20I TGGCCA 1 cut(s) 2666
MspA1I CMGCKG 1 cut(s) 2567
MspI CCGG 1 cut(s) 75
MspR9I CCNGG 3 cut(s) 783, 856, 1226
MunI CAATTG 2 cut(s) 1441, 2216
Mva1269I GAATGC 1 cut(s) 887
MvaI CCWGG 3 cut(s) 783, 856, 1226
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 3 cut(s) 385, 944, 2386
NdeI CATATG 2 cut(s) 1243, 2083
NlaIV GGNNCC 8 cut(s) 1719, 1745, 1771, 2291, 2388, 2389, 2641, 2697
NmuCI GTSAC 2 cut(s) 41, 323
NruI TCGCGA 1 cut(s) 84
NsiI ATGCAT 4 cut(s) 1243, 1249, 1530, 1620
NspI RCATGY 3 cut(s) 947, 1241, 2029
NspV TTCGAA 1 cut(s) 1675
PaeI GCATGC 1 cut(s) 947
PagI TCATGA 1 cut(s) 1333
PceI AGGCCT 1 cut(s) 854
PciI ACATGT 1 cut(s) 2025
PciSI GCTCTTC 1 cut(s) 540
PcsI WCGNNNNNNNCGW 1 cut(s) 1964
PctI GAATGC 1 cut(s) 887
PdmI GAANNNNTTC 2 cut(s) 1575, 2411
PfeI GAWTC 4 cut(s) 251, 416, 1474, 2760
PkrI GCNGC 7 cut(s) 205, 874, 1893, 2112, 2263, 2270, 2496
PleI GAGTC 3 cut(s) 887, 997, 1941
PpsI GAGTC 3 cut(s) 887, 997, 1941
Ppu21I YACGTR 2 cut(s) 518, 1204
PpuMI RGGWCCY 1 cut(s) 1752
PscI ACATGT 1 cut(s) 2025
Psp5II RGGWCCY 1 cut(s) 1752
Psp6I CCWGG 3 cut(s) 781, 854, 1224
PspEI GGTNACC 1 cut(s) 1645
PspGI CCWGG 3 cut(s) 781, 854, 1224
PspN4I GGNNCC 8 cut(s) 1719, 1745, 1771, 2291, 2388, 2389, 2641, 2697
PspOMI GGGCCC 1 cut(s) 2387
PspPI GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2387, 2388
PspPPI RGGWCCY 1 cut(s) 1752
PstI CTGCAG 1 cut(s) 2112
PsuI RGATCY 3 cut(s) 65, 587, 1338
RruI TCGCGA 1 cut(s) 84
RsaI GTAC 4 cut(s) 516, 1131, 1719, 2692
RsaNI GTAC 4 cut(s) 515, 1130, 1718, 2691
RseI CAYNNNNRTG 5 cut(s) 880, 948, 1067, 1242, 1605
SapI GCTCTTC 1 cut(s) 540
SaqAI TTAA 5 cut(s) 1164, 1292, 1512, 2141, 2845
SatI GCNGC 7 cut(s) 204, 873, 1892, 2111, 2262, 2269, 2495
Sau96I GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2387, 2388
SchI GAGTC 3 cut(s) 887, 998, 1942
ScrFI CCNGG 3 cut(s) 783, 856, 1226
SduI GDGCHC 5 cut(s) 103, 1746, 2277, 2391, 2461
SfaNI GCATC 8 cut(s) 130, 190, 309, 559, 1256, 1515, 1627, 2248
SfcI CTRYAG 2 cut(s) 2108, 2764
SfuI TTCGAA 1 cut(s) 1675
SinI GGWCC 3 cut(s) 1752, 1915, 2289
SmiMI CAYNNNNRTG 5 cut(s) 880, 948, 1067, 1242, 1605
SmlI CTYRAG 5 cut(s) 482, 1921, 2462, 2726, 2774
SmoI CTYRAG 5 cut(s) 482, 1921, 2462, 2726, 2774
SnaBI TACGTA 1 cut(s) 1204
SphI GCATGC 1 cut(s) 947
SseBI AGGCCT 1 cut(s) 854
SsiI CCGC 9 cut(s) 585, 957, 1029, 1562, 2261, 2296, 2325, 2358, 2565
SspI AATATT 1 cut(s) 1510
SspMI CTAG 8 cut(s) 1118, 1149, 1896, 1973, 2189, 2226, 2396, 2486
StuI AGGCCT 1 cut(s) 854
StyD4I CCNGG 3 cut(s) 781, 854, 1224
StyI CCWWGG 1 cut(s) 1972
TaaI ACNGT 5 cut(s) 1352, 1645, 1946, 2282, 2695
TaiI ACGT 3 cut(s) 520, 1206, 2164
TaqI TCGA 5 cut(s) 432, 1675, 1881, 2153, 2234
TaqII GACCGA 1 cut(s) 2277
TatI WGTACW 1 cut(s) 1129
TauI GCSGC 1 cut(s) 2264
TfiI GAWTC 4 cut(s) 251, 416, 1474, 2760
Tru1I TTAA 5 cut(s) 1164, 1292, 1512, 2141, 2845
Tru9I TTAA 5 cut(s) 1164, 1292, 1512, 2141, 2845
TscAI CASTG 1 cut(s) 2681
TseFI GTSAC 2 cut(s) 41, 323
TseI GCWGC 6 cut(s) 203, 872, 1891, 2110, 2268, 2494
Tsp45I GTSAC 2 cut(s) 41, 323
TspDTI ATGAA 7 cut(s) 109, 295, 822, 903, 942, 1880, 2069
TspGWI ACGGA 2 cut(s) 1956, 2618
TspRI CASTG 1 cut(s) 2681
VneI GTGCAC 1 cut(s) 99
VpaK11BI GGWCC 3 cut(s) 1752, 1915, 2289
XapI RAATTY 3 cut(s) 760, 1573, 2143
XceI RCATGY 3 cut(s) 947, 1241, 2029
XmaJI CCTAGG 1 cut(s) 1972
XmiI GTMKAC 2 cut(s) 1689, 2158
XmnI GAANNNNTTC 2 cut(s) 1575, 2411
XspI CTAG 8 cut(s) 1118, 1149, 1896, 1973, 2189, 2226, 2396, 2486
Zsp2I ATGCAT 4 cut(s) 1243, 1249, 1530, 1620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.