Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

3494273 .. 3500391

Gene Structure 6119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G049900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2787 bp

ATGGCTGAGGCAGTTGTTTCCCTTGTGCTCGAAAGTGTCAGAGAATTCACCATTCAGGAAGCCAAGTTCTTGTCTGGAGTCAGCCATCAAGTTGAGGTTGCACAAAATGAGCTGCAATTGATGCAGGGCTTCCTCAAAGATGCAGATGCAAGACAAGGACAAGATGAAACAGTCCGTATTTGGGTTGCCAAGATTAGAGATGCTGCTTATGATTTGGAGGATGTCATCCAAACTTACGGCTTGAAAGTGGTTTCCAAGAAGAAAAGAGGCCTCAAGAATGTTCTCAAAAGATTTGCCTGCATCTTCAAAGAAGGGGTTCATCTTCACCAGATTGGGGCAGAAATTGAGAATATCACTACCAAAATTTCGGCGTTGAGATCGAGTTTGCAGAGTTATAACATAAAGGAAATAAGGGACAGTAGTGGTGGTGAATCTTCCTTGCAATTGCATGAGAGGCTAAGGAGAAGTTATTCTCATGTTGTTGAACGTGATGTTGTTGGGTTAGAGTCCAATGTTGAAGATTTGGTTATGCATTTACTGAAAGATGAAAATCGTCATCCAGTAGTATCTATTTGGGGTATGGGCGGTTTAGGGAAGACCACCCTTGCAAGAAAGTTTTATCATCACAAAAAAGTAAGGCAGCATTTTCATAGTTTTGCTTGGGTCTGTGTATCTCAACGTTTTCAAGTAAGAAATGTTTGGGAGGGAATTTTAATTGAACTCATTTCCCCTACCAAGGAAAAAAGACAAGAAGTTAAGGACATGACAGATGTTGAAATAGCAAAGGAGCTTTTCCGTGTCTTGCAAAAAATGAAATGTTTGGTGATCCTTGATGACATATGGAGAATCGAGACATGGAATCTTTTGAAGGCTGCATTTCCAGATGTGGAAACAGAGAGCACAATATTGCTTACCACACGCAATCAAGCAGTAGCTTCGCTGGCAAAGAGAAATGCTTATCCACTCCAGCCACTCAATGAGATGGAGAGTTGGGAACTATTTGAGAAGAAAGCAATACATGCAAGGGCTGAAATCGACTTGGGAATGTACGAAATATTAGGAAGGAATATGCTTCAACATTGTAAAGGTTTACCATTAGCCATCATTGTGCTTGCCGGAGTTTTAGCCAGAAAAAACTCCATTAGAGAATGGGAGAGAGTGTCTAAGAATGTTCATGAATACATAAGCAGAGGCATCAAACATGAAGAAGAATATGAAGGTGTATCAAGAGTGTTGGCATTGAGTTATGATGACCTACCGTATTACTTAAAACCATGTTTTTTATATTTAGGTCATTATCCTGAAGACTCTGAGTTTTTGGTGAGCGAATTGACTAAGTTATGGGTGGCAGAAGGTCTTATCTCCTTGGGACAACAAAGACATGGTTCAAGGGAAACAATTGAGGATATAGCACGTGATTACTTAAGTGAGTTGGTGGAAAGGTGTTTGGTTCAAGAGGGAAGAAGTGGTTCAACTAGGACAATTAAAAGTTGTCGAATCCATGATCTTGTACGAGACATGTGTTTGTTAAAGGCAAAAGATGAAAGCTTTCTCCAGATGAACTATTCTTTGCAAGAAAATACTTCTTCTATGGCAGCCGAGGCAACACAATTGGGGAAAATTCGAAGACTTGCAATTTACTTGGATAAGAACGCAAATATGTTGGTTTCTTCAAGAAATGAAACAAATAGTCACGTAAGGTCTCTATTATTCTTTGGCCTAATAGAATGGATTCCAAAAAGTGAAAAAGGATTACTATCTCCGTTGAAGGATTTCAAAGTGCTTAGAGTTTTGAAGGTTGAAGATCTTTGGACAAGAAGAGTAGAGTTGCCAAGTGAAATTGGAAATATGGTACACTTAAGGTTTCTAAGTGTGAGGAGGAGCAAAATAAAAACGTTTCCGCCATCCCTAGGTAGTTTAGTATGCTTGCAAACTCTTGATTTTCGTGTTCCAGCTTATATCAACATTGTCATCCCAAATGTGATAATGAAGATGAAACAATTAAGACATTTATATTTACCTCGGAATTACCGAGCAAAGGGTAAGTTGAAGCTGTCTACTCTTGGCCATCTACAGACCTTACATAACCTTTCAAGTGAGTATTGTGATTTGAAAGATGTTGGTAGATTAACCAATCTTAGAAAACTGAAAATAAGAGTGTTAGGCTCTTTGCAAAATCTGGAGGAAATCTTAAAATCAACAGGCAGCACGCTTAACCGTATCCGGTCTCTAATTGTGAAAAATGACACGAATAGCGGTGAAGAGCAAGCTATGCAAATAGTATCAAGCTATCGGGGTATATACAAATTGAAGTTGGATGGGCCAATCACAGAATTACCGAAAGAGCTCCACAACTATCCAAACCTCACCAAGTTAGTATTGTGGAGTTGTGGTCTCAAGGAGGACCAAATGGGAATACTAGAGAAGCTGCCAAACCTAACAACTCTGCGCCTTGGATATAAAACGTTCCGTAAGAATACAAAGATACTGGTTTTCTCCAAAGGAGGCTTTCCTTCTCTTGAATTTCTTCATGTTTATGGTATGTCCCAAATAACAGAGTGGAGAGTAGAGGAAGGAGCCATGCCTCGTCTCTGTCGATTGAACATCACGTATTGCTCGGGATTGACTACACTCCCAGATGGGCTGAGATATCTTACTAATCTCAGGAAATTAACCATCAGAGGGATGCGTAGAGAACTCCACCGTCGGATTGAGGAAGATGGAGAGGATTTCTATAAAATTCAACATGTACCTTCCCTTGTAATTGGAGAACCAGACGACTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

929

Amino Acids

106.85

Weight (kDa)

9.19

Isoelectric Point (pI)

49.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	396
AccI	GTMKAC	1 cut(s)	2057
AciI	CCGC	3 cut(s)	585, 1901, 2256
AclI	AACGTT	3 cut(s)	679, 1895, 2465
AclWI	GGATC	1 cut(s)	820
AcoI	YGGCCR	1 cut(s)	2065
AcsI	RAATTY	6 cut(s)	44, 363, 708, 1620, 2522, 2739
AcuI	CTGAAG	1 cut(s)	1323
AcvI	CACGTG	1 cut(s)	1415
AfaI	GTAC	4 cut(s)	1049, 1512, 1854, 2751
AfiI	CCNNNNNNNGG	6 cut(s)	181, 334, 736, 1910, 2038, 2682
AflII	CTTAAG	2 cut(s)	1423, 1858
AflIII	ACRYGT	2 cut(s)	1518, 2746
AloI	GAACNNNNNNTCC	2 cut(s)	50, 82
Alw21I	GWGCWC	3 cut(s)	30, 902, 2349
Alw26I	GTCTC	6 cut(s)	845, 1509, 1707, 2232, 2399, 2594
AlwI	GGATC	1 cut(s)	820
Ama87I	CYCGRG	1 cut(s)	2617
AoxI	GGCC	4 cut(s)	268, 1717, 2065, 2321
ApeKI	GCWGC	7 cut(s)	112, 203, 640, 872, 1595, 2205, 2428
ApoI	RAATTY	6 cut(s)	44, 363, 708, 1620, 2522, 2739
Asp700I	GAANNNNTTC	7 cut(s)	315, 469, 1468, 1548, 1731, 1772, 2526
AspA2I	CCTAGG	1 cut(s)	1909
AspLEI	GCGC	1 cut(s)	2451
AspS9I	GGNCC	2 cut(s)	2321, 2404
AsuHPI	GGTGA	7 cut(s)	40, 317, 440, 835, 1333, 2270, 2359
AsuII	TTCGAA	1 cut(s)	1624
AvaI	CYCGRG	1 cut(s)	2617
AvaII	GGWCC	1 cut(s)	2404
AvrII	CCTAGG	1 cut(s)	1909
BalI	TGGCCA	1 cut(s)	2067
BanII	GRGCYC	1 cut(s)	2349
BbrPI	CACGTG	1 cut(s)	1415
BbsI	GAAGAC	3 cut(s)	602, 1311, 1633
Bbv12I	GWGCWC	3 cut(s)	30, 902, 2349
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	7 cut(s)	99, 190, 652, 859, 1607, 2217, 2415
BccI	CCATC	9 cut(s)	93, 976, 1109, 1912, 2076, 2312, 2633, 2684, 2714
BceAI	ACGGC	1 cut(s)	253
BcgI	CGANNNNNNTGC	2 cut(s)	918, 952
BciVI	GTATCC	1 cut(s)	2231
BcoDI	GTCTC	6 cut(s)	845, 1509, 1707, 2232, 2399, 2594
BfaI	CTAG	3 cut(s)	1476, 1910, 2420
BfmI	CTRYAG	1 cut(s)	2072
BfrI	CTTAAG	2 cut(s)	1423, 1858
BfuI	GTATCC	1 cut(s)	2231
BglII	AGATCT	1 cut(s)	1804
BisI	GCNGC	7 cut(s)	113, 204, 641, 873, 1596, 2206, 2429
BlnI	CCTAGG	1 cut(s)	1909
BlsI	GCNGC	7 cut(s)	114, 205, 642, 874, 1597, 2207, 2430
Bme18I	GGWCC	1 cut(s)	2404
BmeT110I	CYCGRG	1 cut(s)	2617
BmgT120I	GGNCC	2 cut(s)	2321, 2404
BmiI	GGNNCC	1 cut(s)	2578
BmsI	GCATC	7 cut(s)	111, 130, 136, 190, 309, 1203, 2676
BpiI	GAAGAC	3 cut(s)	602, 1311, 1633
BpmI	CTGGAG	4 cut(s)	96, 950, 1538, 2201
Bpu10I	CCTNAGC	2 cut(s)	6, 458
Bpu14I	TTCGAA	1 cut(s)	1624
BpuEI	CTTGAG	2 cut(s)	257, 2381
BsaAI	YACGTR	3 cut(s)	1415, 1696, 2610
BsaBI	GATNNNNATC	2 cut(s)	549, 1756
BsaI	GGTCTC	3 cut(s)	1707, 2232, 2399
BsaJI	CCNNGG	6 cut(s)	735, 1365, 1599, 1909, 2021, 2452
BsaWI	WCCGGW	1 cut(s)	2223
BsaXI	ACNNNNNCTCC	4 cut(s)	1145, 1175, 2377, 2407
Bsc4I	CCNNNNNNNGG	6 cut(s)	181, 334, 736, 1910, 2038, 2682
Bse1I	ACTGG	2 cut(s)	560, 2493
Bse8I	GATNNNNATC	2 cut(s)	549, 1756
BseDI	CCNNGG	6 cut(s)	735, 1365, 1599, 1909, 2021, 2452
BseGI	GGATG	7 cut(s)	225, 226, 556, 1904, 1971, 2323, 2691
BseJI	GATNNNNATC	2 cut(s)	549, 1756
BseLI	CCNNNNNNNGG	6 cut(s)	181, 334, 736, 1910, 2038, 2682
BseMII	CTCAG	3 cut(s)	1302, 2636, 2677
BseNI	ACTGG	2 cut(s)	560, 2493
BseRI	GAGGAG	2 cut(s)	1891, 1894
BseXI	GCAGC	7 cut(s)	99, 190, 652, 859, 1607, 2217, 2415
BshFI	GGCC	4 cut(s)	270, 1719, 2067, 2323
BsiHKAI	GWGCWC	3 cut(s)	30, 902, 2349
BsiHKCI	CYCGRG	1 cut(s)	2617
BsiSI	CCGG	2 cut(s)	1116, 2224
BslFI	GGGAC	3 cut(s)	428, 1383, 2530
BslI	CCNNNNNNNGG	6 cut(s)	181, 334, 736, 1910, 2038, 2682
BsmAI	GTCTC	6 cut(s)	845, 1509, 1707, 2232, 2399, 2594
BsmBI	CGTCTC	1 cut(s)	2594
BsmFI	GGGAC	3 cut(s)	428, 1383, 2530
BsnI	GGCC	4 cut(s)	270, 1719, 2067, 2323
Bso31I	GGTCTC	3 cut(s)	1707, 2232, 2399
BsoBI	CYCGRG	1 cut(s)	2617
Bsp119I	TTCGAA	1 cut(s)	1624
Bsp1286I	GDGCHC	3 cut(s)	30, 902, 2349
Bsp143I	GATC	4 cut(s)	377, 825, 1504, 1804
BspACI	CCGC	3 cut(s)	585, 1901, 2256
BspANI	GGCC	4 cut(s)	270, 1719, 2067, 2323
BspCNI	CTCAG	3 cut(s)	1303, 2637, 2676
BspHI	TCATGA	1 cut(s)	1174
BspLI	GGNNCC	1 cut(s)	2578
BspPI	GGATC	1 cut(s)	820
BspQI	GCTCTTC	1 cut(s)	2256
BspT104I	TTCGAA	1 cut(s)	1624
BspTI	CTTAAG	2 cut(s)	1423, 1858
BspTNI	GGTCTC	3 cut(s)	1707, 2232, 2399
BsrI	ACTGG	2 cut(s)	560, 2493
BssECI	CCNNGG	6 cut(s)	735, 1365, 1599, 1909, 2021, 2452
BssMI	GATC	4 cut(s)	377, 825, 1504, 1804
BssT1I	CCWWGG	4 cut(s)	735, 1365, 1909, 2452
Bst4CI	ACNGT	5 cut(s)	172, 419, 1260, 2219, 2705
Bst6I	CTCTTC	2 cut(s)	1813, 2256
BstAFI	CTTAAG	2 cut(s)	1423, 1858
BstAPI	GCANNNNNTGC	3 cut(s)	121, 1019, 2272
BstBAI	YACGTR	3 cut(s)	1415, 1696, 2610
BstBI	TTCGAA	1 cut(s)	1624
BstC8I	GCNNGC	6 cut(s)	298, 942, 1113, 1928, 2210, 2268
BstF5I	GGATG	7 cut(s)	225, 226, 556, 1904, 1971, 2323, 2691
BstHHI	GCGC	1 cut(s)	2451
BstKTI	GATC	4 cut(s)	380, 828, 1507, 1807
BstMAI	GTCTC	6 cut(s)	845, 1509, 1707, 2232, 2399, 2594
BstMBI	GATC	4 cut(s)	377, 825, 1504, 1804
BstMWI	GCNNNNNNNGC	6 cut(s)	121, 454, 941, 1019, 1601, 2272
BstNSI	RCATGY	3 cut(s)	1022, 1522, 2750
BstSFI	CTRYAG	1 cut(s)	2072
BstV1I	GCAGC	7 cut(s)	99, 190, 652, 859, 1607, 2217, 2415
BstV2I	GAAGAC	3 cut(s)	602, 1311, 1633
BstX2I	RGATCY	1 cut(s)	1804
BstYI	RGATCY	1 cut(s)	1804
BsuI	GTATCC	1 cut(s)	2231
BsuRI	GGCC	4 cut(s)	270, 1719, 2067, 2323
BtsCI	GGATG	7 cut(s)	225, 226, 556, 1904, 1971, 2323, 2691
Cac8I	GCNNGC	6 cut(s)	298, 942, 1113, 1928, 2210, 2268
CciI	TCATGA	1 cut(s)	1174
CfoI	GCGC	1 cut(s)	2451
Cfr13I	GGNCC	2 cut(s)	2321, 2404
Csp6I	GTAC	4 cut(s)	1048, 1511, 1853, 2750
CviQI	GTAC	4 cut(s)	1048, 1511, 1853, 2750
DpnI	GATC	4 cut(s)	379, 827, 1506, 1806
DpnII	GATC	4 cut(s)	377, 825, 1504, 1804
EaeI	YGGCCR	1 cut(s)	2065
Eam1104I	CTCTTC	2 cut(s)	1813, 2256
EarI	CTCTTC	2 cut(s)	1813, 2256
EciI	GGCGGA	1 cut(s)	1890
Ecl136II	GAGCTC	1 cut(s)	2347
Eco130I	CCWWGG	4 cut(s)	735, 1365, 1909, 2452
Eco147I	AGGCCT	1 cut(s)	270
Eco24I	GRGCYC	1 cut(s)	2349
Eco31I	GGTCTC	3 cut(s)	1707, 2232, 2399
Eco32I	GATATC	1 cut(s)	2651
Eco47I	GGWCC	1 cut(s)	2404
Eco53kI	GAGCTC	1 cut(s)	2347
Eco57I	CTGAAG	1 cut(s)	1323
Eco72I	CACGTG	1 cut(s)	1415
Eco88I	CYCGRG	1 cut(s)	2617
EcoICRI	GAGCTC	1 cut(s)	2347
EcoRI	GAATTC	1 cut(s)	44
EcoRV	GATATC	1 cut(s)	2651
EcoT14I	CCWWGG	4 cut(s)	735, 1365, 1909, 2452
EcoT22I	ATGCAT	1 cut(s)	534
EcoT38I	GRGCYC	1 cut(s)	2349
ErhI	CCWWGG	4 cut(s)	735, 1365, 1909, 2452
Esp3I	CGTCTC	1 cut(s)	2594
FaqI	GGGAC	3 cut(s)	428, 1383, 2530
FauNDI	CATATG	1 cut(s)	839
FblI	GTMKAC	1 cut(s)	2057
Fnu4HI	GCNGC	7 cut(s)	113, 204, 641, 873, 1596, 2206, 2429
FokI	GGATG	7 cut(s)	212, 233, 543, 1891, 1958, 2330, 2698
FriOI	GRGCYC	1 cut(s)	2349
Fsp4HI	GCNGC	7 cut(s)	113, 204, 641, 873, 1596, 2206, 2429
FspBI	CTAG	3 cut(s)	1476, 1910, 2420
GlaI	GCGC	1 cut(s)	2450
GluI	GCNGC	7 cut(s)	113, 204, 641, 873, 1596, 2206, 2429
GsuI	CTGGAG	4 cut(s)	96, 950, 1538, 2201
HaeIII	GGCC	4 cut(s)	270, 1719, 2067, 2323
HapII	CCGG	2 cut(s)	1116, 2224
HhaI	GCGC	1 cut(s)	2451
Hin6I	GCGC	1 cut(s)	2449
HinP1I	GCGC	1 cut(s)	2449
HindIII	AAGCTT	1 cut(s)	1546
HinfI	GANTC	8 cut(s)	78, 431, 506, 846, 859, 1307, 1497, 1732
HpaII	CCGG	2 cut(s)	1116, 2224
HphI	GGTGA	7 cut(s)	40, 317, 440, 835, 1333, 2270, 2359
Hpy166II	GTNNAC	3 cut(s)	1091, 1855, 2058
Hpy188I	TCNGA	5 cut(s)	41, 1312, 2025, 2681, 2709
Hpy8I	GTNNAC	3 cut(s)	1091, 1855, 2058
Hpy99I	CGWCG	1 cut(s)	2709
HpyCH4III	ACNGT	5 cut(s)	172, 419, 1260, 2219, 2705
HpyCH4IV	ACGT	7 cut(s)	487, 679, 1414, 1695, 1895, 2465, 2609
HpyF10VI	GCNNNNNNNGC	6 cut(s)	121, 454, 941, 1019, 1601, 2272
HpySE526I	ACGT	7 cut(s)	487, 679, 1414, 1695, 1895, 2465, 2609
HspAI	GCGC	1 cut(s)	2449
Kzo9I	GATC	4 cut(s)	377, 825, 1504, 1804
LguI	GCTCTTC	1 cut(s)	2256
LmnI	GCTCC	4 cut(s)	787, 1881, 2352, 2576
Lsp1109I	GCAGC	7 cut(s)	99, 190, 652, 859, 1607, 2217, 2415
LweI	GCATC	7 cut(s)	111, 130, 136, 190, 309, 1203, 2676
MaeI	CTAG	3 cut(s)	1476, 1910, 2420
MaeII	ACGT	7 cut(s)	487, 679, 1414, 1695, 1895, 2465, 2609
MaeIII	GTNAC	1 cut(s)	1691
MalI	GATC	4 cut(s)	379, 827, 1506, 1806
MboI	GATC	4 cut(s)	377, 825, 1504, 1804
MfeI	CAATTG	4 cut(s)	116, 443, 1398, 1610
MflI	RGATCY	1 cut(s)	1804
MhlI	GDGCHC	3 cut(s)	30, 902, 2349
MlsI	TGGCCA	1 cut(s)	2067
MluNI	TGGCCA	1 cut(s)	2067
MlyI	GAGTC	3 cut(s)	87, 515, 1301
MmeI	TCCRAC	2 cut(s)	2295, 2687
Mox20I	TGGCCA	1 cut(s)	2067
Mph1103I	ATGCAT	1 cut(s)	534
MroXI	GAANNNNTTC	7 cut(s)	315, 469, 1468, 1548, 1731, 1772, 2526
MscI	TGGCCA	1 cut(s)	2067
MslI	CAYNNNNRTG	2 cut(s)	1106, 2535
Msp20I	TGGCCA	1 cut(s)	2067
MspCI	CTTAAG	2 cut(s)	1423, 1858
MspI	CCGG	2 cut(s)	1116, 2224
MunI	CAATTG	4 cut(s)	116, 443, 1398, 1610
MwoI	GCNNNNNNNGC	6 cut(s)	121, 454, 941, 1019, 1601, 2272
NdeI	CATATG	1 cut(s)	839
NdeII	GATC	4 cut(s)	377, 825, 1504, 1804
NlaIV	GGNNCC	1 cut(s)	2578
NmeAIII	GCCGAG	1 cut(s)	1624
NmuCI	GTSAC	1 cut(s)	1691
NsiI	ATGCAT	1 cut(s)	534
NspI	RCATGY	3 cut(s)	1022, 1522, 2750
NspV	TTCGAA	1 cut(s)	1624
PagI	TCATGA	1 cut(s)	1174
PceI	AGGCCT	1 cut(s)	270
PciI	ACATGT	2 cut(s)	1518, 2746
PciSI	GCTCTTC	1 cut(s)	2256
PcsI	WCGNNNNNNNCGW	2 cut(s)	2029, 2593
PdmI	GAANNNNTTC	7 cut(s)	315, 469, 1468, 1548, 1731, 1772, 2526
PfeI	GAWTC	5 cut(s)	431, 846, 859, 1497, 1732
PkrI	GCNGC	7 cut(s)	114, 205, 642, 874, 1597, 2207, 2430
PleI	GAGTC	3 cut(s)	86, 514, 1301
PmaCI	CACGTG	1 cut(s)	1415
PmlI	CACGTG	1 cut(s)	1415
PpsI	GAGTC	3 cut(s)	86, 514, 1301
Ppu21I	YACGTR	3 cut(s)	1415, 1696, 2610
PscI	ACATGT	2 cut(s)	1518, 2746
PsiI	TTATAA	1 cut(s)	396
Psp124BI	GAGCTC	1 cut(s)	2349
Psp1406I	AACGTT	3 cut(s)	679, 1895, 2465
PspCI	CACGTG	1 cut(s)	1415
PspN4I	GGNNCC	1 cut(s)	2578
PspPI	GGNCC	2 cut(s)	2321, 2404
PsuI	RGATCY	1 cut(s)	1804
RsaI	GTAC	4 cut(s)	1049, 1512, 1854, 2751
RsaNI	GTAC	4 cut(s)	1048, 1511, 1853, 2750
RseI	CAYNNNNRTG	2 cut(s)	1106, 2535
SacI	GAGCTC	1 cut(s)	2349
SapI	GCTCTTC	1 cut(s)	2256
SatI	GCNGC	7 cut(s)	113, 204, 641, 873, 1596, 2206, 2429
Sau3AI	GATC	4 cut(s)	377, 825, 1504, 1804
Sau96I	GGNCC	2 cut(s)	2321, 2404
SchI	GAGTC	3 cut(s)	87, 515, 1301
SduI	GDGCHC	3 cut(s)	30, 902, 2349
SfaNI	GCATC	7 cut(s)	111, 130, 136, 190, 309, 1203, 2676
SfcI	CTRYAG	1 cut(s)	2072
SfuI	TTCGAA	1 cut(s)	1624
SinI	GGWCC	1 cut(s)	2404
SmiMI	CAYNNNNRTG	2 cut(s)	1106, 2535
SmlI	CTYRAG	4 cut(s)	272, 1423, 1858, 2396
SmoI	CTYRAG	4 cut(s)	272, 1423, 1858, 2396
SseBI	AGGCCT	1 cut(s)	270
SsiI	CCGC	3 cut(s)	585, 1901, 2256
SspI	AATATT	2 cut(s)	906, 1056
SspMI	CTAG	3 cut(s)	1476, 1910, 2420
SstI	GAGCTC	1 cut(s)	2349
StuI	AGGCCT	1 cut(s)	270
StyI	CCWWGG	4 cut(s)	735, 1365, 1909, 2452
TaaI	ACNGT	5 cut(s)	172, 419, 1260, 2219, 2705
TaiI	ACGT	7 cut(s)	490, 682, 1417, 1698, 1898, 2468, 2612
TaqI	TCGA	7 cut(s)	30, 380, 849, 1035, 1495, 1624, 2596
TfiI	GAWTC	5 cut(s)	431, 846, 859, 1497, 1732
TseFI	GTSAC	1 cut(s)	1691
TseI	GCWGC	7 cut(s)	112, 203, 640, 872, 1595, 2205, 2428
Tsp45I	GTSAC	1 cut(s)	1691
TspGWI	ACGGA	4 cut(s)	164, 785, 1752, 2459
Vha464I	CTTAAG	2 cut(s)	1423, 1858
VpaK11BI	GGWCC	1 cut(s)	2404
XapI	RAATTY	6 cut(s)	44, 363, 708, 1620, 2522, 2739
XceI	RCATGY	3 cut(s)	1022, 1522, 2750
XmaJI	CCTAGG	1 cut(s)	1909
XmiI	GTMKAC	1 cut(s)	2057
XmnI	GAANNNNTTC	7 cut(s)	315, 469, 1468, 1548, 1731, 1772, 2526
XspI	CTAG	3 cut(s)	1476, 1910, 2420
Zsp2I	ATGCAT	1 cut(s)	534

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.