Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

54019018 .. 54023827

Gene Structure 4810 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39803

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3105 bp

ATGGCTGAAGCTGTAGTTTCTTTTGTGGTTGAAAGGATCGGAGACTTCATCATCCAAGAAGGGAAGTTCTTGTATGGAGTCTGGGATCAGGTTGAGCTCGCACAAACTGAGCTACAGTTCACGAAGGGTTTCCTCAAAGATGCTGATGCAAGACAAGGAGATAATGAAACTGTTCGTATCTGCGTTGCAAAAATAAGAGAGGCTGCTTATGATTTGGAAGATGTCATTGAAATCTATGCCTTGAAAGTGGCTTGCAAGAGGGAGGGAGGTATTAAGAGTGTGCTCAAGAGGTTTGGTTGCATGTTGAAGGAAGGAGTTGACCTCCACAAGATTGGGGGGGAAATCGGAGTCATCACCACCAATATTTATGATCTGAGGTTGCGTTTGCAAACTAACAACATTAGAGAACTAAGGGAGAGTACTACTCAAGGTGTCACTTCTGTGTATGAGAGGCAGCAACAACTCAGGCGAACTTATTCTCATATAATTGATCGTGATGTTGTTGGGTTGGAGGAGAGCGTCAGAGAATTGGCTGTGCATTTGGTTAAGAGTGGAGACAGACACCGAGTTGTTTCTATTTGTGGGATGGGGGGGTTGGGGAAAACAACTCTTGCAAAACAGGTGTATCATGATAGTGAAGTTCGGCAGCACTTTGATTCTTTTGCTTGGGTGTGCATATCTCAACGATGTCAAGTGAGAGACGTTTGGGAAGACATCTTGATTAAAGTTTCTGCCCTGCAAAGAGAGGAGATTGCAAAATTGAAGGATGGTGAAATAGCCAAGAAGCTTTATCTTGTGCAACAAGAGAGTAAATGTTTGGTGGTAATTGATGACATATGGAGTGTTGGGACATGGGACACTCTGAAAGCTGCATTTCCTTTGTGTGAGGAAACCAAGAGCAGAATATTACTCACCACTCGCAAGGAAGAAGTAGCTTTGCATTCAGATAGAAATGGTTTCCTCTTCCGGCCTCGACCACTAAATGATGATGAAAGCTGGCAACTATTGGAGAAGATAGCAATATCTGGAAGAGATGAAATAAATTCTGGAATCTCCACAAGGAAGAAAGATTTAGCAAAGAAGATGCTTCAGTATTGTGCAGGTTTGCCATTAGCCATCACTGTGCTTGCAGGACTTCTTGCAAGAAAGGACACAGTTGATGAGTGGGATATGGTGTATAAAAATGTTCATACATACATTGGAAGAGGCAAAGGCCACGAACAAGAATGCAGCGGTGCATCGTGGGTGTTGGCATTGAGTTATGATGACTTACCATATCACTTAAAACCATGCTTTCTGTACTTAGGTAATTTTCCTGAAGATTCTGATATACCAGTGAAAAAATTGACTCAATTATGGATAGCAGAAGGTTTTATATCTGCATCACATGAGACAATGGAGGATGCAGCATACGGCTATTTAACTGAGCTGGTAGAAAGATGTGTGGTACAAATTGGGGAACAGGGTTCAGTTAGAAAGATTAAATCTTGTCATCTGCATGATCTCATGCGAGACATGTGCTTAGAAAAGGCGAAAGAGGAGAACTTTCTCCAGAACGTCAATTTTTCACATCAAAACAGGACCTCTGTTTCTTCTTCCATGGTAACCAATGCTACAGCAACGGTTAAAGTTCGAAGACTTGCAATTTATTTGAATAGTAATGTTGATGAATTGGTTCCATTGAGGAACCACAAAGACAGCCACCTTCGGTCTCTACTGTACTTTGCCCCAGTAAATTGCATTCTCAAAGATGAGAAGTTGGTAGGATCGTTGGTTAAGAACTTCAGATTGCTTCGAGTTTTGAAGTTTGAAGGTATGGTAACATCAGGAGAACTGCCGAATGAGATTGGCAACATGGTCCACTTAAGATTTTTGAGTTTGTGGTGTACTCAGGTAACAAGGCTTCCATCCTCCCTAGGTAAATTGATATGTTTGCAAACTCTCAATTTAAAGTTCTGTGATTGTAATGTAATTCCAAATGTGATTTGGAAGATGGAACAACTGAGGCATTTGTATTTACCCTCAAACCTGAGGAAACTGGGGATACGAGTGACAACCAGCTTGGAAAAGTTGGAGGAAATTTTGAAATCTATAAGCAGCACACTTGATGGCATTCGATCTCTCCATGTTTTCAGTTGGCTTGGAACTAATAGTGGTACAGAGGTTACACAAATAGTGTCGAGTTGTCGTCATATATACAAGTTGGTTTTGAATGGGCGAACTGTAGAGTTGCCAAACGATCTTCATGACTTTCCAAACCTCACAAAGATAACATTGGTTCACTGTGATCTCAAGGACAACCAAATGGCTGTGCTAGAGAAGCTGCCAAACCTTAAAACTCTTTGCCTGATGGAGGAGACTTTCGAGTACAAGAACACAAAGACACTTGTTTTCTCCAAAGGTGGCTTTCCTCATCTTGAATGTCTCTCACTTATTTGCATACGAGAAGCAGAGGACTTGGAGGTGGAAGAAGGGGCCATGCCTAGGCTCCGCCGTTTGTACATAACACGTTGCCGCAAATTGAAGACAATTCCAGATGGGCTGAGATATGTTACTAGCCTCAAGAAACTAACCGTAGCAATGCCTAGATCATTCGTTAGCAGGCTTCAAGTTGGAGGAGAGGATTACTATAAAATCGAGCACGTGCCTTCTGTTGTACTTACGAGAAAATCAAATCGAAGCGGGCGGCAACGATCGAATTGGATTTCGAATTCGAAGATTGACGAGGGAGGGGATAGCCGGGAGGAATGGCTGAGCGCAGATCCCGATAGGGATAGTCCGGTGAGGATTGAGAGTCCGATGCAGTCGGCGGAGAATGAGGCGCACAATTGGCAGGAGCCGAGGAGGGTTGTGGGGAACTGGGCGAGGGGATCGGAGAGCAGGGAAAACGACGATGTTGGGGTTGAGTCGGTATACGCCGGGTGTTCCAGATACATGAGGTGTTTGCCGATGCTGACATTGGAGGATCTTAAAAGATATGGGGATAAACGCCGCGGGATCCAGGCGGAAAATGTACAGTGCTATCCAGAAGCTTCGCAAGGGGTTCTCGTGAGTCTAGCTTTCCTGCTCTCATTTCTCTTTTTCTTCTTTTGTTTGTTGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

1034

Amino Acids

117.93

Weight (kDa)

7.84

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	5 - 88	4.2e-21	Rx N-terminal domain
NB-ARC	PF00931	171 - 344	1.3e-42	NB-ARC domain
WHD_DRP	PF23559	438 - 506	1.9e-17	Disease resistance protein Winged helix domain
LRR_14	PF23598	568 - 694	3.7e-20	Leucine-rich repeat region
LRR_14	PF23598	676 - 864	1.9e-16	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1091
AccI	GTMKAC	1 cut(s)	2913
AccII	CGCG	1 cut(s)	2994
AciI	CCGC	9 cut(s)	1233, 2491, 2515, 2682, 2686, 2810, 2992, 2994, 3005
AclWI	GGATC	8 cut(s)	44, 93, 1774, 2756, 2878, 2973, 2992, 3005
AcsI	RAATTY	3 cut(s)	1042, 2079, 2710
AcuI	CTGAAG	4 cut(s)	27, 1073, 1338, 1768
AcvI	CACGTG	1 cut(s)	2644
AfiI	CCNNNNNNNGG	2 cut(s)	2353, 2484
AflII	CTTAAG	1 cut(s)	1864
AflIII	ACRYGT	2 cut(s)	1515, 2507
AjnI	CCWGG	1 cut(s)	3000
AleI	CACNNNNGTG	1 cut(s)	440
Alw21I	GWGCWC	3 cut(s)	99, 285, 2643
Alw26I	GTCTC	8 cut(s)	36, 549, 693, 1385, 1506, 1716, 2351, 2429
AlwI	GGATC	8 cut(s)	44, 93, 1774, 2756, 2878, 2973, 2992, 3005
AoxI	GGCC	3 cut(s)	968, 1213, 2475
ApeKI	GCWGC	8 cut(s)	203, 454, 646, 869, 1230, 1406, 2097, 2323
ApoI	RAATTY	3 cut(s)	1042, 2079, 2710
Asp700I	GAANNNNTTC	4 cut(s)	128, 171, 475, 1674
AspA2I	CCTAGG	2 cut(s)	1915, 2483
AspLEI	GCGC	2 cut(s)	2759, 2824
AspS9I	GGNCC	3 cut(s)	1581, 1858, 2475
AsuC2I	CCSGG	2 cut(s)	2741, 2920
AsuHPI	GGTGA	4 cut(s)	346, 782, 904, 2794
AsuII	TTCGAA	3 cut(s)	1633, 2708, 2714
AvaII	GGWCC	2 cut(s)	1581, 1858
AvrII	CCTAGG	2 cut(s)	1915, 2483
AxyI	CCTNAGG	1 cut(s)	2030
BaeI	ACNNNNGTAYC	4 cut(s)	608, 641, 2148, 2181
BamHI	GGATCC	1 cut(s)	2997
BanII	GRGCYC	1 cut(s)	99
BarI	GAAGNNNNNNTAC	2 cut(s)	1887, 1919
BauI	CACGAG	1 cut(s)	3047
BbrPI	CACGTG	1 cut(s)	2644
BbsI	GAAGAC	3 cut(s)	717, 1642, 2531
Bbv12I	GWGCWC	3 cut(s)	99, 285, 2643
BbvI	GCAGC	8 cut(s)	190, 466, 658, 856, 1242, 1418, 2109, 2310
BccI	CCATC	8 cut(s)	580, 761, 1124, 1915, 1987, 2102, 2344, 2531
BceAI	ACGGC	2 cut(s)	1429, 2478
BcgI	CGANNNNNNTGC	2 cut(s)	1500, 1534
BciT130I	CCWGG	1 cut(s)	3002
BciVI	GTATCC	1 cut(s)	2037
BcnI	CCSGG	2 cut(s)	2741, 2920
BcoDI	GTCTC	8 cut(s)	36, 549, 693, 1385, 1506, 1716, 2351, 2429
BfaI	CTAG	6 cut(s)	1916, 2315, 2484, 2556, 2586, 3056
BfmI	CTRYAG	4 cut(s)	12, 113, 1614, 2223
BfrI	CTTAAG	1 cut(s)	1864
BfuAI	ACCTGC	1 cut(s)	1091
BfuI	GTATCC	1 cut(s)	2037
BlnI	CCTAGG	2 cut(s)	1915, 2483
BlpI	GCTNAGC	1 cut(s)	2753
BmcAI	AGTACT	1 cut(s)	421
Bme1390I	CCNGG	3 cut(s)	2741, 2920, 3002
Bme18I	GGWCC	2 cut(s)	1581, 1858
BmgT120I	GGNCC	3 cut(s)	1581, 1858, 2475
BmiI	GGNNCC	6 cut(s)	1677, 1688, 2476, 2489, 2838, 2999
BmrFI	CCNGG	3 cut(s)	2741, 2920, 3002
BmrI	ACTGGG	3 cut(s)	1724, 2048, 2869
BmsI	GCATC	8 cut(s)	130, 136, 1074, 1247, 1391, 1393, 2790, 2940
BmuI	ACTGGG	3 cut(s)	1724, 2048, 2869
BpiI	GAAGAC	3 cut(s)	717, 1642, 2531
BplI	GAGNNNNNCTC	4 cut(s)	306, 338, 409, 441
BpmI	CTGGAG	1 cut(s)	1535
Bpu1102I	GCTNAGC	1 cut(s)	2753
Bpu14I	TTCGAA	3 cut(s)	1633, 2708, 2714
BpuEI	CTTGAG	4 cut(s)	269, 411, 2276, 2546
BpuMI	CCSGG	2 cut(s)	2741, 2920
BsaAI	YACGTR	1 cut(s)	2644
BsaI	GGTCTC	1 cut(s)	1716
BsaJI	CCNNGG	5 cut(s)	1599, 1915, 2483, 2840, 2992
BsaWI	WCCGGW	1 cut(s)	2779
Bsc4I	CCNNNNNNNGG	2 cut(s)	2353, 2484
Bse1I	ACTGG	4 cut(s)	1334, 1730, 2043, 2864
Bse21I	CCTNAGG	1 cut(s)	2030
Bse3DI	GCAATG	1 cut(s)	2586
BseBI	CCWGG	1 cut(s)	3002
BseDI	CCNNGG	5 cut(s)	1599, 1915, 2483, 2840, 2992
BseGI	GGATG	5 cut(s)	51, 591, 772, 1408, 1907
BseLI	CCNNNNNNNGG	2 cut(s)	2353, 2484
BseMI	GCAATG	1 cut(s)	2586
BseMII	CTCAG	9 cut(s)	99, 365, 478, 1416, 1904, 1994, 2021, 2534, 2744
BseNI	ACTGG	4 cut(s)	1334, 1730, 2043, 2864
BseRI	GAGGAG	6 cut(s)	527, 761, 1553, 2369, 2631, 2857
BseXI	GCAGC	8 cut(s)	190, 466, 658, 856, 1242, 1418, 2109, 2310
BsgI	GTGCAG	1 cut(s)	1119
Bsh1236I	CGCG	1 cut(s)	2994
Bsh1285I	CGRYCG	1 cut(s)	2696
BshFI	GGCC	3 cut(s)	970, 1215, 2477
BsiEI	CGRYCG	1 cut(s)	2696
BsiHKAI	GWGCWC	3 cut(s)	99, 285, 2643
BsiSI	CCGG	4 cut(s)	967, 2740, 2780, 2919
BslFI	GGGAC	2 cut(s)	862, 869
BslI	CCNNNNNNNGG	2 cut(s)	2353, 2484
BsmAI	GTCTC	8 cut(s)	36, 549, 693, 1385, 1506, 1716, 2351, 2429
BsmBI	CGTCTC	1 cut(s)	693
BsmFI	GGGAC	2 cut(s)	862, 869
BsmI	GAATGC	4 cut(s)	940, 1232, 1740, 2112
BsnI	GGCC	3 cut(s)	970, 1215, 2477
Bso31I	GGTCTC	1 cut(s)	1716
Bsp119I	TTCGAA	3 cut(s)	1633, 2708, 2714
Bsp1286I	GDGCHC	3 cut(s)	99, 285, 2643
Bsp1407I	TGTACA	2 cut(s)	2499, 3013
Bsp1720I	GCTNAGC	1 cut(s)	2753
Bsp19I	CCATGG	1 cut(s)	1599
BspACI	CCGC	9 cut(s)	1233, 2491, 2515, 2682, 2686, 2810, 2992, 2994, 3005
BspANI	GGCC	3 cut(s)	970, 1215, 2477
BspCNI	CTCAG	9 cut(s)	100, 366, 477, 1417, 1903, 1995, 2022, 2535, 2745
BspFNI	CGCG	1 cut(s)	2994
BspHI	TCATGA	2 cut(s)	628, 2245
BspLI	GGNNCC	6 cut(s)	1677, 1688, 2476, 2489, 2838, 2999
BspMI	ACCTGC	1 cut(s)	1091
BspPI	GGATC	8 cut(s)	44, 93, 1774, 2756, 2878, 2973, 2992, 3005
BspT104I	TTCGAA	3 cut(s)	1633, 2708, 2714
BspTI	CTTAAG	1 cut(s)	1864
BspTNI	GGTCTC	1 cut(s)	1716
BsrDI	GCAATG	1 cut(s)	2586
BsrGI	TGTACA	2 cut(s)	2499, 3013
BsrI	ACTGG	4 cut(s)	1334, 1730, 2043, 2864
BssECI	CCNNGG	5 cut(s)	1599, 1915, 2483, 2840, 2992
BssNAI	GTATAC	1 cut(s)	2914
BssSI	CACGAG	1 cut(s)	3047
BssT1I	CCWWGG	3 cut(s)	1599, 1915, 2483
Bst1107I	GTATAC	1 cut(s)	2914
Bst2BI	CACGAG	1 cut(s)	3047
Bst2UI	CCWGG	1 cut(s)	3002
Bst6I	CTCTTC	3 cut(s)	968, 1024, 1198
BstAFI	CTTAAG	1 cut(s)	1864
BstAUI	TGTACA	2 cut(s)	2499, 3013
BstBAI	YACGTR	1 cut(s)	2644
BstBI	TTCGAA	3 cut(s)	1633, 2708, 2714
BstC8I	GCNNGC	6 cut(s)	99, 253, 998, 1128, 2603, 2684
BstDSI	CCRYGG	2 cut(s)	1599, 2992
BstEII	GGTNACC	1 cut(s)	1603
BstENI	CCTNNNNNAGG	1 cut(s)	2351
BstF5I	GGATG	5 cut(s)	51, 591, 772, 1408, 1907
BstFNI	CGCG	1 cut(s)	2994
BstHHI	GCGC	2 cut(s)	2759, 2824
BstMAI	GTCTC	8 cut(s)	36, 549, 693, 1385, 1506, 1716, 2351, 2429
BstMCI	CGRYCG	1 cut(s)	2696
BstMWI	GCNNNNNNNGC	2 cut(s)	2320, 2830
BstNI	CCWGG	1 cut(s)	3002
BstNSI	RCATGY	2 cut(s)	304, 1519
BstPI	GGTNACC	1 cut(s)	1603
BstSCI	CCNGG	3 cut(s)	2739, 2918, 3000
BstSFI	CTRYAG	4 cut(s)	12, 113, 1614, 2223
BstUI	CGCG	1 cut(s)	2994
BstV1I	GCAGC	8 cut(s)	190, 466, 658, 856, 1242, 1418, 2109, 2310
BstV2I	GAAGAC	3 cut(s)	717, 1642, 2531
BstX2I	RGATCY	3 cut(s)	2761, 2965, 2997
BstXI	CCANNNNNNTGG	1 cut(s)	332
BstYI	RGATCY	3 cut(s)	2761, 2965, 2997
BstZ17I	GTATAC	1 cut(s)	2914
Bsu36I	CCTNAGG	1 cut(s)	2030
BsuI	GTATCC	1 cut(s)	2037
BsuRI	GGCC	3 cut(s)	970, 1215, 2477
BtgI	CCRYGG	2 cut(s)	1599, 2992
BtsCI	GGATG	5 cut(s)	51, 591, 772, 1408, 1907
BtsIMutI	CAGTG	4 cut(s)	1119, 1341, 2281, 3023
BveI	ACCTGC	1 cut(s)	1091
Cac8I	GCNNGC	6 cut(s)	99, 253, 998, 1128, 2603, 2684
CciI	TCATGA	2 cut(s)	628, 2245
CfoI	GCGC	2 cut(s)	2759, 2824
Cfr13I	GGNCC	3 cut(s)	1581, 1858, 2475
Cfr42I	CCGCGG	1 cut(s)	2995
CseI	GACGC	1 cut(s)	508
DraI	TTTAAA	1 cut(s)	1950
Eam1104I	CTCTTC	3 cut(s)	968, 1024, 1198
EarI	CTCTTC	3 cut(s)	968, 1024, 1198
EciI	GGCGGA	3 cut(s)	2480, 2825, 3020
Ecl136II	GAGCTC	1 cut(s)	97
Eco130I	CCWWGG	3 cut(s)	1599, 1915, 2483
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	1716
Eco47I	GGWCC	2 cut(s)	1581, 1858
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	4 cut(s)	27, 1073, 1338, 1768
Eco72I	CACGTG	1 cut(s)	2644
Eco81I	CCTNAGG	1 cut(s)	2030
Eco91I	GGTNACC	1 cut(s)	1603
EcoICRI	GAGCTC	1 cut(s)	97
EcoNI	CCTNNNNNAGG	1 cut(s)	2351
EcoO109I	RGGNCCY	1 cut(s)	1581
EcoO65I	GGTNACC	1 cut(s)	1603
EcoRI	GAATTC	1 cut(s)	2710
EcoRII	CCWGG	1 cut(s)	3000
EcoT14I	CCWWGG	3 cut(s)	1599, 1915, 2483
EcoT38I	GRGCYC	1 cut(s)	99
ErhI	CCWWGG	3 cut(s)	1599, 1915, 2483
Esp3I	CGTCTC	1 cut(s)	693
FaqI	GGGAC	2 cut(s)	862, 869
FauI	CCCGC	2 cut(s)	2675, 2987
FauNDI	CATATG	1 cut(s)	836
FblI	GTMKAC	1 cut(s)	2913
FokI	GGATG	5 cut(s)	38, 598, 779, 1415, 1894
FriOI	GRGCYC	1 cut(s)	99
FspBI	CTAG	6 cut(s)	1916, 2315, 2484, 2556, 2586, 3056
GlaI	GCGC	2 cut(s)	2758, 2823
GsuI	CTGGAG	1 cut(s)	1535
HaeIII	GGCC	3 cut(s)	970, 1215, 2477
HapII	CCGG	4 cut(s)	967, 2740, 2780, 2919
HgaI	GACGC	1 cut(s)	508
HhaI	GCGC	2 cut(s)	2759, 2824
Hin6I	GCGC	2 cut(s)	2757, 2822
HinP1I	GCGC	2 cut(s)	2757, 2822
HincII	GTYRAC	1 cut(s)	319
HindII	GTYRAC	1 cut(s)	319
HindIII	AAGCTT	2 cut(s)	785, 3030
HinfI	GANTC	9 cut(s)	78, 348, 656, 1050, 1322, 1348, 2794, 2906, 3052
HpaII	CCGG	4 cut(s)	967, 2740, 2780, 2919
HphI	GGTGA	4 cut(s)	346, 782, 904, 2794
Hpy166II	GTNNAC	6 cut(s)	120, 319, 1861, 1887, 2281, 2914
Hpy8I	GTNNAC	6 cut(s)	120, 319, 1861, 1887, 2281, 2914
Hpy99I	CGWCG	1 cut(s)	2894
HpyCH4IV	ACGT	4 cut(s)	702, 1557, 2509, 2643
HpyF10VI	GCNNNNNNNGC	2 cut(s)	2320, 2830
HpySE526I	ACGT	4 cut(s)	702, 1557, 2509, 2643
HspAI	GCGC	2 cut(s)	2757, 2822
KspI	CCGCGG	1 cut(s)	2995
LmnI	GCTCC	2 cut(s)	2493, 2836
Lsp1109I	GCAGC	8 cut(s)	190, 466, 658, 856, 1242, 1418, 2109, 2310
LweI	GCATC	8 cut(s)	130, 136, 1074, 1247, 1391, 1393, 2790, 2940
MaeI	CTAG	6 cut(s)	1916, 2315, 2484, 2556, 2586, 3056
MaeII	ACGT	4 cut(s)	702, 1557, 2509, 2643
MaeIII	GTNAC	7 cut(s)	433, 1603, 1819, 1894, 2050, 2164, 2551
MfeI	CAATTG	1 cut(s)	2827
MflI	RGATCY	3 cut(s)	2761, 2965, 2997
MhlI	GDGCHC	3 cut(s)	99, 285, 2643
MlyI	GAGTC	6 cut(s)	87, 357, 1342, 2803, 2915, 3061
MmeI	TCCRAC	3 cut(s)	489, 2052, 2593
MroXI	GAANNNNTTC	4 cut(s)	128, 171, 475, 1674
MslI	CAYNNNNRTG	4 cut(s)	440, 633, 1121, 1497
MspA1I	CMGCKG	2 cut(s)	1233, 2994
MspCI	CTTAAG	1 cut(s)	1864
MspI	CCGG	4 cut(s)	967, 2740, 2780, 2919
MspR9I	CCNGG	3 cut(s)	2741, 2920, 3002
MunI	CAATTG	1 cut(s)	2827
Mva1269I	GAATGC	4 cut(s)	940, 1232, 1740, 2112
MvaI	CCWGG	1 cut(s)	3002
MvnI	CGCG	1 cut(s)	2994
MwoI	GCNNNNNNNGC	2 cut(s)	2320, 2830
NciI	CCSGG	2 cut(s)	2741, 2920
NcoI	CCATGG	1 cut(s)	1599
NdeI	CATATG	1 cut(s)	836
NlaIV	GGNNCC	6 cut(s)	1677, 1688, 2476, 2489, 2838, 2999
NmeAIII	GCCGAG	1 cut(s)	2865
NmuCI	GTSAC	2 cut(s)	433, 2050
NspI	RCATGY	2 cut(s)	304, 1519
NspV	TTCGAA	3 cut(s)	1633, 2708, 2714
OliI	CACNNNNGTG	1 cut(s)	440
PagI	TCATGA	2 cut(s)	628, 2245
PciI	ACATGT	1 cut(s)	1515
PctI	GAATGC	4 cut(s)	940, 1232, 1740, 2112
PdmI	GAANNNNTTC	4 cut(s)	128, 171, 475, 1674
PfeI	GAWTC	3 cut(s)	656, 1050, 1322
Ple19I	CGATCG	1 cut(s)	2696
PleI	GAGTC	6 cut(s)	86, 356, 1342, 2802, 2914, 3060
PmaCI	CACGTG	1 cut(s)	2644
PmlI	CACGTG	1 cut(s)	2644
PpsI	GAGTC	6 cut(s)	86, 356, 1342, 2802, 2914, 3060
Ppu21I	YACGTR	1 cut(s)	2644
PpuMI	RGGWCCY	1 cut(s)	1581
PscI	ACATGT	1 cut(s)	1515
Psp124BI	GAGCTC	1 cut(s)	99
Psp5II	RGGWCCY	1 cut(s)	1581
Psp6I	CCWGG	1 cut(s)	3000
PspCI	CACGTG	1 cut(s)	2644
PspEI	GGTNACC	1 cut(s)	1603
PspGI	CCWGG	1 cut(s)	3000
PspN4I	GGNNCC	6 cut(s)	1677, 1688, 2476, 2489, 2838, 2999
PspPI	GGNCC	3 cut(s)	1581, 1858, 2475
PspPPI	RGGWCCY	1 cut(s)	1581
PsuI	RGATCY	3 cut(s)	2761, 2965, 2997
PvuI	CGATCG	1 cut(s)	2696
RseI	CAYNNNNRTG	4 cut(s)	440, 633, 1121, 1497
SacI	GAGCTC	1 cut(s)	99
SacII	CCGCGG	1 cut(s)	2995
Sau96I	GGNCC	3 cut(s)	1581, 1858, 2475
ScaI	AGTACT	1 cut(s)	421
SchI	GAGTC	6 cut(s)	87, 357, 1342, 2803, 2915, 3061
ScrFI	CCNGG	3 cut(s)	2741, 2920, 3002
SduI	GDGCHC	3 cut(s)	99, 285, 2643
SfaNI	GCATC	8 cut(s)	130, 136, 1074, 1247, 1391, 1393, 2790, 2940
SfcI	CTRYAG	4 cut(s)	12, 113, 1614, 2223
Sfr303I	CCGCGG	1 cut(s)	2995
SfuI	TTCGAA	3 cut(s)	1633, 2708, 2714
SgrBI	CCGCGG	1 cut(s)	2995
SinI	GGWCC	2 cut(s)	1581, 1858
SmiMI	CAYNNNNRTG	4 cut(s)	440, 633, 1121, 1497
SmlI	CTYRAG	5 cut(s)	284, 426, 1864, 2291, 2561
SmoI	CTYRAG	5 cut(s)	284, 426, 1864, 2291, 2561
SsiI	CCGC	9 cut(s)	1233, 2491, 2515, 2682, 2686, 2810, 2992, 2994, 3005
SspI	AATATT	2 cut(s)	364, 906
SspMI	CTAG	6 cut(s)	1916, 2315, 2484, 2556, 2586, 3056
SstI	GAGCTC	1 cut(s)	99
StyD4I	CCNGG	3 cut(s)	2739, 2918, 3000
StyI	CCWWGG	3 cut(s)	1599, 1915, 2483
TaiI	ACGT	4 cut(s)	705, 1560, 2512, 2646
TaqII	GACCGA	1 cut(s)	1698
TatI	WGTACW	8 cut(s)	419, 1299, 1719, 1886, 2367, 2499, 2656, 3013
TauI	GCSGC	3 cut(s)	2517, 2689, 2994
TfiI	GAWTC	3 cut(s)	656, 1050, 1322
TscAI	CASTG	4 cut(s)	1126, 1341, 2288, 3023
TseFI	GTSAC	2 cut(s)	433, 2050
TseI	GCWGC	8 cut(s)	203, 454, 646, 869, 1230, 1406, 2097, 2323
Tsp45I	GTSAC	2 cut(s)	433, 2050
TspDTI	ATGAA	7 cut(s)	37, 180, 1005, 1050, 1178, 1683, 2234
TspRI	CASTG	4 cut(s)	1126, 1341, 2288, 3023
Vha464I	CTTAAG	1 cut(s)	1864
VpaK11BI	GGWCC	2 cut(s)	1581, 1858
XagI	CCTNNNNNAGG	1 cut(s)	2351
XapI	RAATTY	3 cut(s)	1042, 2079, 2710
XceI	RCATGY	2 cut(s)	304, 1519
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1983
XmaJI	CCTAGG	2 cut(s)	1915, 2483
XmiI	GTMKAC	1 cut(s)	2913
XmnI	GAANNNNTTC	4 cut(s)	128, 171, 475, 1674
XspI	CTAG	6 cut(s)	1916, 2315, 2484, 2556, 2586, 3056
ZrmI	AGTACT	1 cut(s)	421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.