transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 291 |
| AccII | CGCG | 1 cut(s) | 156 |
| AciI | CCGC | 1 cut(s) | 431 |
| AclWI | GGATC | 1 cut(s) | 82 |
| AcsI | RAATTY | 1 cut(s) | 336 |
| AdeI | CACNNNGTG | 1 cut(s) | 41 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 178 |
| AgsI | TTSAA | 2 cut(s) | 548, 599 |
| AjiI | CACGTC | 1 cut(s) | 197 |
| AluBI | AGCT | 3 cut(s) | 205, 266, 428 |
| AluI | AGCT | 3 cut(s) | 205, 266, 428 |
| Alw26I | GTCTC | 1 cut(s) | 181 |
| AlwI | GGATC | 1 cut(s) | 82 |
| AoxI | GGCC | 3 cut(s) | 92, 180, 642 |
| ApeKI | GCWGC | 2 cut(s) | 428, 434 |
| ApoI | RAATTY | 1 cut(s) | 336 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 587 |
| AspLEI | GCGC | 1 cut(s) | 156 |
| AspS9I | GGNCC | 1 cut(s) | 92 |
| AsuHPI | GGTGA | 2 cut(s) | 153, 203 |
| BbvI | GCAGC | 2 cut(s) | 415, 421 |
| BccI | CCATC | 2 cut(s) | 250, 617 |
| BcoDI | GTCTC | 1 cut(s) | 181 |
| BfaI | CTAG | 1 cut(s) | 679 |
| BfmI | CTRYAG | 2 cut(s) | 394, 438 |
| BglII | AGATCT | 1 cut(s) | 541 |
| BisI | GCNGC | 3 cut(s) | 429, 432, 435 |
| BlsI | GCNGC | 3 cut(s) | 430, 433, 436 |
| BmgBI | CACGTC | 1 cut(s) | 197 |
| BmgT120I | GGNCC | 1 cut(s) | 92 |
| BmiI | GGNNCC | 1 cut(s) | 466 |
| BmsI | GCATC | 1 cut(s) | 271 |
| BoxI | GACNNNNGTC | 1 cut(s) | 396 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 640, 672 |
| BpuEI | CTTGAG | 1 cut(s) | 290 |
| BsaBI | GATNNNNATC | 1 cut(s) | 79 |
| BsaWI | WCCGGW | 1 cut(s) | 486 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 178 |
| Bse8I | GATNNNNATC | 1 cut(s) | 79 |
| BseGI | GGATG | 1 cut(s) | 454 |
| BseJI | GATNNNNATC | 1 cut(s) | 79 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 178 |
| BseMII | CTCAG | 1 cut(s) | 90 |
| BseRI | GAGGAG | 2 cut(s) | 335, 653 |
| BseXI | GCAGC | 2 cut(s) | 415, 421 |
| Bsh1236I | CGCG | 1 cut(s) | 156 |
| BshFI | GGCC | 3 cut(s) | 94, 182, 644 |
| BsiSI | CCGG | 1 cut(s) | 487 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 178 |
| BsmAI | GTCTC | 1 cut(s) | 181 |
| BsmI | GAATGC | 1 cut(s) | 535 |
| BsnI | GGCC | 3 cut(s) | 94, 182, 644 |
| Bsp143I | GATC | 4 cut(s) | 16, 74, 230, 541 |
| BspACI | CCGC | 1 cut(s) | 431 |
| BspANI | GGCC | 3 cut(s) | 94, 182, 644 |
| BspCNI | CTCAG | 1 cut(s) | 91 |
| BspFNI | CGCG | 1 cut(s) | 156 |
| BspLI | GGNNCC | 1 cut(s) | 466 |
| BspPI | GGATC | 1 cut(s) | 82 |
| BssMI | GATC | 4 cut(s) | 16, 74, 230, 541 |
| BssNAI | GTATAC | 1 cut(s) | 292 |
| Bst1107I | GTATAC | 1 cut(s) | 292 |
| Bst4CI | ACNGT | 1 cut(s) | 58 |
| BstC8I | GCNNGC | 2 cut(s) | 152, 568 |
| BstDEI | CTNAG | 2 cut(s) | 68, 99 |
| BstF5I | GGATG | 1 cut(s) | 454 |
| BstFNI | CGCG | 1 cut(s) | 156 |
| BstHHI | GCGC | 1 cut(s) | 156 |
| BstKTI | GATC | 4 cut(s) | 19, 77, 233, 544 |
| BstMAI | GTCTC | 1 cut(s) | 181 |
| BstMBI | GATC | 4 cut(s) | 16, 74, 230, 541 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 434 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 396 |
| BstSFI | CTRYAG | 2 cut(s) | 394, 438 |
| BstUI | CGCG | 1 cut(s) | 156 |
| BstV1I | GCAGC | 2 cut(s) | 415, 421 |
| BstX2I | RGATCY | 1 cut(s) | 541 |
| BstYI | RGATCY | 1 cut(s) | 541 |
| BstZ17I | GTATAC | 1 cut(s) | 292 |
| BsuRI | GGCC | 3 cut(s) | 94, 182, 644 |
| BtrI | CACGTC | 1 cut(s) | 197 |
| BtsCI | GGATG | 1 cut(s) | 454 |
| Cac8I | GCNNGC | 2 cut(s) | 152, 568 |
| CfoI | GCGC | 1 cut(s) | 156 |
| Cfr13I | GGNCC | 1 cut(s) | 92 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 8, 43, 52, 87 |
| CviAII | CATG | 6 cut(s) | 173, 341, 475, 563, 592, 646 |
| CviJI | RGCY | 9 cut(s) | 94, 182, 205, 266, 428, 434, 465, 473, 644 |
| CviKI_1 | RGCY | 9 cut(s) | 94, 182, 205, 266, 428, 434, 465, 473, 644 |
| DdeI | CTNAG | 2 cut(s) | 68, 99 |
| DpnI | GATC | 4 cut(s) | 18, 76, 232, 543 |
| DpnII | GATC | 4 cut(s) | 16, 74, 230, 541 |
| DraIII | CACNNNGTG | 1 cut(s) | 41 |
| FaeI | CATG | 6 cut(s) | 176, 344, 478, 566, 595, 649 |
| FatI | CATG | 6 cut(s) | 172, 340, 474, 562, 591, 645 |
| FblI | GTMKAC | 1 cut(s) | 291 |
| Fnu4HI | GCNGC | 3 cut(s) | 429, 432, 435 |
| FokI | GGATG | 1 cut(s) | 461 |
| Fsp4HI | GCNGC | 3 cut(s) | 429, 432, 435 |
| FspBI | CTAG | 1 cut(s) | 679 |
| GlaI | GCGC | 1 cut(s) | 155 |
| GluI | GCNGC | 3 cut(s) | 429, 432, 435 |
| HaeIII | GGCC | 3 cut(s) | 94, 182, 644 |
| HapII | CCGG | 1 cut(s) | 487 |
| HhaI | GCGC | 1 cut(s) | 156 |
| Hin1II | CATG | 6 cut(s) | 176, 344, 478, 566, 595, 649 |
| Hin6I | GCGC | 1 cut(s) | 154 |
| HinP1I | GCGC | 1 cut(s) | 154 |
| HincII | GTYRAC | 1 cut(s) | 61 |
| HindII | GTYRAC | 1 cut(s) | 61 |
| HindIII | AAGCTT | 2 cut(s) | 203, 264 |
| HinfI | GANTC | 6 cut(s) | 11, 86, 158, 216, 478, 483 |
| HpaII | CCGG | 1 cut(s) | 487 |
| HphI | GGTGA | 2 cut(s) | 153, 203 |
| Hpy166II | GTNNAC | 3 cut(s) | 30, 61, 292 |
| Hpy188I | TCNGA | 8 cut(s) | 16, 85, 100, 142, 230, 243, 280, 469 |
| Hpy188III | TCNNGA | 7 cut(s) | 8, 307, 389, 494, 545, 599, 620 |
| Hpy8I | GTNNAC | 3 cut(s) | 30, 61, 292 |
| Hpy99I | CGWCG | 1 cut(s) | 198 |
| HpyAV | CCTTC | 1 cut(s) | 105 |
| HpyCH4III | ACNGT | 1 cut(s) | 58 |
| HpyCH4IV | ACGT | 1 cut(s) | 196 |
| HpyCH4V | TGCA | 4 cut(s) | 284, 344, 533, 566 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 434 |
| HpyF3I | CTNAG | 2 cut(s) | 68, 99 |
| HpySE526I | ACGT | 1 cut(s) | 196 |
| Hsp92II | CATG | 6 cut(s) | 176, 344, 478, 566, 595, 649 |
| HspAI | GCGC | 1 cut(s) | 154 |
| Kzo9I | GATC | 4 cut(s) | 16, 74, 230, 541 |
| LmnI | GCTCC | 1 cut(s) | 470 |
| LpnPI | CCDG | 6 cut(s) | 21, 75, 500, 507, 532, 633 |
| Lsp1109I | GCAGC | 2 cut(s) | 415, 421 |
| LweI | GCATC | 1 cut(s) | 271 |
| MaeI | CTAG | 1 cut(s) | 679 |
| MaeII | ACGT | 1 cut(s) | 196 |
| MaeIII | GTNAC | 1 cut(s) | 377 |
| MalI | GATC | 4 cut(s) | 18, 76, 232, 543 |
| MboI | GATC | 4 cut(s) | 16, 74, 230, 541 |
| MboII | GAAGA | 3 cut(s) | 144, 265, 466 |
| MflI | RGATCY | 1 cut(s) | 541 |
| MluCI | AATT | 1 cut(s) | 336 |
| MlyI | GAGTC | 2 cut(s) | 80, 492 |
| MmeI | TCCRAC | 1 cut(s) | 306 |
| MnlI | CCTC | 7 cut(s) | 172, 313, 314, 436, 496, 631, 634 |
| MroXI | GAANNNNTTC | 1 cut(s) | 587 |
| MseI | TTAA | 2 cut(s) | 207, 416 |
| MspI | CCGG | 1 cut(s) | 487 |
| Mva1269I | GAATGC | 1 cut(s) | 535 |
| MvnI | CGCG | 1 cut(s) | 156 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 434 |
| NdeII | GATC | 4 cut(s) | 16, 74, 230, 541 |
| NlaIII | CATG | 6 cut(s) | 176, 344, 478, 566, 595, 649 |
| NlaIV | GGNNCC | 1 cut(s) | 466 |
| NmeAIII | GCCGAG | 1 cut(s) | 208 |
| NmuCI | GTSAC | 1 cut(s) | 377 |
| PctI | GAATGC | 1 cut(s) | 535 |
| PdmI | GAANNNNTTC | 1 cut(s) | 587 |
| PfeI | GAWTC | 4 cut(s) | 11, 158, 216, 478 |
| PkrI | GCNGC | 3 cut(s) | 430, 433, 436 |
| PleI | GAGTC | 2 cut(s) | 80, 491 |
| PpsI | GAGTC | 2 cut(s) | 80, 491 |
| PshAI | GACNNNNGTC | 1 cut(s) | 396 |
| PspN4I | GGNNCC | 1 cut(s) | 466 |
| PspPI | GGNCC | 1 cut(s) | 92 |
| PsuI | RGATCY | 1 cut(s) | 541 |
| SaqAI | TTAA | 2 cut(s) | 207, 416 |
| SatI | GCNGC | 3 cut(s) | 429, 432, 435 |
| Sau3AI | GATC | 4 cut(s) | 16, 74, 230, 541 |
| Sau96I | GGNCC | 1 cut(s) | 92 |
| SchI | GAGTC | 2 cut(s) | 80, 492 |
| SetI | ASST | 8 cut(s) | 43, 69, 199, 207, 268, 306, 430, 447 |
| SfaNI | GCATC | 1 cut(s) | 271 |
| SfcI | CTRYAG | 2 cut(s) | 394, 438 |
| SmlI | CTYRAG | 1 cut(s) | 305 |
| SmoI | CTYRAG | 1 cut(s) | 305 |
| Sse9I | AATT | 1 cut(s) | 336 |
| SsiI | CCGC | 1 cut(s) | 431 |
| SspMI | CTAG | 1 cut(s) | 679 |
| TaaI | ACNGT | 1 cut(s) | 58 |
| TaiI | ACGT | 1 cut(s) | 199 |
| TaqI | TCGA | 4 cut(s) | 118, 251, 365, 481 |
| TasI | AATT | 1 cut(s) | 336 |
| TauI | GCSGC | 1 cut(s) | 434 |
| TfiI | GAWTC | 4 cut(s) | 11, 158, 216, 478 |
| Tru1I | TTAA | 2 cut(s) | 207, 416 |
| Tru9I | TTAA | 2 cut(s) | 207, 416 |
| TseFI | GTSAC | 1 cut(s) | 377 |
| TseI | GCWGC | 2 cut(s) | 428, 434 |
| Tsp45I | GTSAC | 1 cut(s) | 377 |
| TspDTI | ATGAA | 4 cut(s) | 329, 542, 548, 580 |
| XapI | RAATTY | 1 cut(s) | 336 |
| XmiI | GTMKAC | 1 cut(s) | 291 |
| XmnI | GAANNNNTTC | 1 cut(s) | 587 |
| XspI | CTAG | 1 cut(s) | 679 |