MD14G1137200.v1.1
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0000212
Physical Location & Seq
Reverse (-)
22327588 .. 22329531
1944 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1137200.v1.1.491

Sequence Viewer

Length: 1446 bp
ATGGAGGAAATTATATCCTCTTGTTCTTCACAAAATTTTGGTCAAGAAAACTCACCCACACTTCAACGCCTCCAGTTCTTACTTCAGAACCGCCCGGAAAGGTGGGTCTATTCAATTTTCTGGGAAGCCTCAAAACACAGCAATGACCTAGTTTCTTTGTCGTGGGCCGGTGGCCATTTTCAAAGCACTAGGGACTTGACCTCCCAAAAAACCTACAACAAAGTCAGTCATCACCAACCCAAATTGGGGTTCGATGTTCTGGAGAGGAAGAGGGCGATCAGCAGAGAAGTTGAAGCTCTTTTCCATGAAGACATGGATTTGGACGGTGGAGATGTTACTGACGCAGAGTGGGTTTACTTTTACACCGTCTCTTTAACCCAGTCGTTTACTGCCGGCCAAGGGAATAGTAACATTCTGGGCCGTACGTTTTGTTCTGGTGGATTTGTTTGGCTGGCAGGTGATCATGAACTTCAATTCTATGAGTGTGAGAGAGTGAAAGAAGCAAGAATGCATGGAATTCAAACATTGGTTTGTATTGCAACATCATGCGGAGTACTTGAACTCGCTTCCTTGGATGTGATCAAAGAAAATTGGGGTCTTGTGCAGCTATCAAAATCACTTTTCGAATCAGACAACACCGCCACCACCACCAACAAAGTCTCAAAGCAGCTGAGCAGCAGTCTTGAGAATCATGTTCCTCTCTTAGAAAGTGGAATGTTTTCAGGAGCTGATAAAAACGAGTGGGCAACACAAGGTGGTACAAAAGAAGCAGCTCCTGTAAACGTTGGTGGATCATCATCAGACTCAGGACCGTCTGACTCTGTTGGAAACTTAACCTCTAAGAACATAGAGAACATTCGATTAAAAAAGAGAGGAAGATCATCAAACCGTGAAACAGGCAGACCAGAATCACCAATAAACCATGTTGAGGCAGAAAGACAAAGGCGAGAGAAGCTTAACTGTCGATTCTATGCCCTCCGCTCTGTCGTTCCCAATGTGTCCAGAATGGACAAAGCTTCTTTACTTTCTGATGCAGTTGTATACATCAATGAGCTGAAAGCAAGGGTTGGGCAATTGGAGTCCAAAATTCAAGCACAACTTCAAAAGCCCGGTGTTGATATTGGAGGCCAAACAAGCTCCATAGTTGATCATCACCAGACAAGGCCTAGGCTATCATCAAGTTATAATAATAGAGCAGGTGGGGCTTTGGAAATGGATGTGAAGATTGTTGGCTCAGAAGCCATGTTACGAGTTCAGTGTCCGGATTGCGATTACCCTAATGCTAGATTGATGAACGCACTCAAAGACCTGGAGTTACAAGTTTATCATGCAAGCATATCAAGCGTTAAAGAGTTGATGCTTCAAGATGTTGTGGTTAGAGTGCCCCATGGATTCACAAGTGAGGAGGCCATGAGAACTGCTATTTTAGAAAGATGGTACAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

482

Amino Acids

53.66

Weight (kDa)

6.15

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 22 - 208 1.4e-39 bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH PF00010 307 - 353 4.4e-10 Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant PF22754 404 - 476 2.6e-06 Plant bHLH transcription factor, ACT-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1185
AarI CACCTGC 2 cut(s) 446, 1187
Acc36I ACCTGC 2 cut(s) 446, 1187
AccBSI CCGCTC 1 cut(s) 981
AccI GTMKAC 1 cut(s) 1041
AccIII TCCGGA 1 cut(s) 1261
AciI CCGC 4 cut(s) 91, 549, 639, 979
AclI AACGTT 1 cut(s) 783
AclWI GGATC 1 cut(s) 799
AcoI YGGCCR 2 cut(s) 172, 394
AcsI RAATTY 3 cut(s) 34, 516, 1086
AcuI CTGAAG 1 cut(s) 68
AdeI CACNNNGTG 1 cut(s) 755
AfaI GTAC 4 cut(s) 424, 555, 760, 1439
AfiI CCNNNNNNNGG 4 cut(s) 245, 246, 399, 928
AjnI CCWGG 1 cut(s) 1308
AjuI GAANNNNNNNTTGG 2 cut(s) 233, 265
AluBI AGCT 9 cut(s) 296, 607, 670, 728, 773, 955, 1016, 1054, 1137
AluI AGCT 9 cut(s) 296, 607, 670, 728, 773, 955, 1016, 1054, 1137
Alw26I GTCTC 2 cut(s) 373, 664
AlwI GGATC 1 cut(s) 799
AlwNI CAGNNNCTG 2 cut(s) 728, 776
Aor13HI TCCGGA 1 cut(s) 1261
AoxI GGCC 7 cut(s) 165, 172, 394, 418, 1126, 1163, 1407
ApeKI GCWGC 4 cut(s) 604, 667, 675, 770
ApoI RAATTY 3 cut(s) 34, 516, 1086
ArsI GACNNNNNNTTYG 2 cut(s) 25, 57
Asp700I GAANNNNTTC 1 cut(s) 718
AspA2I CCTAGG 1 cut(s) 1166
AspS9I GGNCC 3 cut(s) 165, 418, 809
AsuC2I CCSGG 2 cut(s) 95, 1110
AsuHPI GGTGA 5 cut(s) 45, 224, 470, 903, 1145
AsuII TTCGAA 1 cut(s) 624
AvaII GGWCC 1 cut(s) 809
AvrII CCTAGG 1 cut(s) 1166
BaeGI GKGCMC 1 cut(s) 1386
BalI TGGCCA 1 cut(s) 174
BarI GAAGNNNNNNTAC 2 cut(s) 1230, 1262
BbsI GAAGAC 1 cut(s) 315
BbvI GCAGC 4 cut(s) 616, 679, 687, 782
BccI CCATC 1 cut(s) 1428
BceAI ACGGC 1 cut(s) 405
BciT130I CCWGG 1 cut(s) 1310
BclI TGATCA 3 cut(s) 460, 579, 1147
BcnI CCSGG 2 cut(s) 95, 1110
BcoDI GTCTC 2 cut(s) 373, 664
BfaI CTAG 5 cut(s) 149, 189, 1167, 1284, 1444
BfuAI ACCTGC 2 cut(s) 446, 1187
BisI GCNGC 4 cut(s) 605, 668, 676, 771
BlnI CCTAGG 1 cut(s) 1166
BlpI GCTNAGC 1 cut(s) 671
BlsI GCNGC 4 cut(s) 606, 669, 677, 772
BmcAI AGTACT 1 cut(s) 555
Bme1390I CCNGG 3 cut(s) 95, 1110, 1310
Bme18I GGWCC 1 cut(s) 809
BmgT120I GGNCC 3 cut(s) 165, 418, 809
BmrFI CCNGG 3 cut(s) 95, 1110, 1310
BmrI ACTGGG 1 cut(s) 373
BmsI GCATC 2 cut(s) 1021, 1347
BmuI ACTGGG 1 cut(s) 373
BpiI GAAGAC 1 cut(s) 315
BpmI CTGGAG 3 cut(s) 56, 281, 1331
Bpu1102I GCTNAGC 1 cut(s) 671
Bpu14I TTCGAA 1 cut(s) 624
BpuEI CTTGAG 1 cut(s) 704
BpuMI CCSGG 2 cut(s) 95, 1110
BsaBI GATNNNNATC 1 cut(s) 796
BsaJI CCNNGG 4 cut(s) 397, 570, 1166, 1387
BsaWI WCCGGW 1 cut(s) 1261
BsaXI ACNNNNNCTCC 2 cut(s) 185, 215
Bsc4I CCNNNNNNNGG 4 cut(s) 245, 246, 399, 928
Bse118I RCCGGY 2 cut(s) 167, 392
Bse1I ACTGG 2 cut(s) 73, 379
Bse3DI GCAATG 1 cut(s) 148
Bse8I GATNNNNATC 1 cut(s) 796
BseAI TCCGGA 1 cut(s) 1261
BseBI CCWGG 1 cut(s) 1310
BseDI CCNNGG 4 cut(s) 397, 570, 1166, 1387
BseGI GGATG 2 cut(s) 580, 1222
BseJI GATNNNNATC 1 cut(s) 796
BseLI CCNNNNNNNGG 4 cut(s) 245, 246, 399, 928
BseMI GCAATG 1 cut(s) 148
BseMII CTCAG 3 cut(s) 662, 819, 1248
BseNI ACTGG 2 cut(s) 73, 379
BseRI GAGGAG 1 cut(s) 1418
BseSI GKGCMC 1 cut(s) 1386
BseXI GCAGC 4 cut(s) 616, 679, 687, 782
BsgI GTGCAG 1 cut(s) 623
BshFI GGCC 7 cut(s) 167, 174, 396, 420, 1128, 1165, 1409
BsiSI CCGG 5 cut(s) 95, 168, 393, 1110, 1262
BsiWI CGTACG 1 cut(s) 422
BslFI GGGAC 1 cut(s) 206
BslI CCNNNNNNNGG 4 cut(s) 245, 246, 399, 928
BsmAI GTCTC 2 cut(s) 373, 664
BsmBI CGTCTC 1 cut(s) 373
BsmFI GGGAC 1 cut(s) 206
BsmI GAATGC 1 cut(s) 513
BsnI GGCC 7 cut(s) 167, 174, 396, 420, 1128, 1165, 1409
Bsp119I TTCGAA 1 cut(s) 624
Bsp1286I GDGCHC 1 cut(s) 1386
Bsp13I TCCGGA 1 cut(s) 1261
Bsp143I GATC 6 cut(s) 276, 460, 579, 791, 878, 1147
Bsp1720I GCTNAGC 1 cut(s) 671
Bsp19I CCATGG 1 cut(s) 1387
BspACI CCGC 4 cut(s) 91, 549, 639, 979
BspANI GGCC 7 cut(s) 167, 174, 396, 420, 1128, 1165, 1409
BspCNI CTCAG 3 cut(s) 663, 818, 1247
BspEI TCCGGA 1 cut(s) 1261
BspHI TCATGA 1 cut(s) 463
BspMI ACCTGC 2 cut(s) 446, 1187
BspPI GGATC 1 cut(s) 799
BspT104I TTCGAA 1 cut(s) 624
BsrBI CCGCTC 1 cut(s) 981
BsrDI GCAATG 1 cut(s) 148
BsrFI RCCGGY 2 cut(s) 167, 392
BsrI ACTGG 2 cut(s) 73, 379
BssAI RCCGGY 2 cut(s) 167, 392
BssECI CCNNGG 4 cut(s) 397, 570, 1166, 1387
BssMI GATC 6 cut(s) 276, 460, 579, 791, 878, 1147
BssNAI GTATAC 1 cut(s) 1042
BssT1I CCWWGG 4 cut(s) 397, 570, 1166, 1387
Bst1107I GTATAC 1 cut(s) 1042
Bst2UI CCWGG 1 cut(s) 1310
Bst4CI ACNGT 5 cut(s) 326, 367, 813, 890, 962
Bst6I CTCTTC 1 cut(s) 263
BstBI TTCGAA 1 cut(s) 624
BstC8I GCNNGC 3 cut(s) 394, 453, 1333
BstDEI CTNAG 5 cut(s) 671, 703, 805, 840, 1234
BstDSI CCRYGG 1 cut(s) 1387
BstF5I GGATG 2 cut(s) 580, 1222
BstKTI GATC 6 cut(s) 279, 463, 582, 794, 881, 1150
BstMAI GTCTC 2 cut(s) 373, 664
BstMBI GATC 6 cut(s) 276, 460, 579, 791, 878, 1147
BstMWI GCNNNNNNNGC 4 cut(s) 952, 1134, 1202, 1341
BstNI CCWGG 1 cut(s) 1310
BstSCI CCNGG 3 cut(s) 93, 1108, 1308
BstSLI GKGCMC 1 cut(s) 1386
BstV1I GCAGC 4 cut(s) 616, 679, 687, 782
BstV2I GAAGAC 1 cut(s) 315
BstZ17I GTATAC 1 cut(s) 1042
BsuRI GGCC 7 cut(s) 167, 174, 396, 420, 1128, 1165, 1409
BtgI CCRYGG 1 cut(s) 1387
BtsCI GGATG 2 cut(s) 580, 1222
BtsIMutI CAGTG 1 cut(s) 1262
BveI ACCTGC 2 cut(s) 446, 1187
Cac8I GCNNGC 3 cut(s) 394, 453, 1333
CaiI CAGNNNCTG 2 cut(s) 728, 776
CciI TCATGA 1 cut(s) 463
Cfr10I RCCGGY 2 cut(s) 167, 392
Cfr13I GGNCC 3 cut(s) 165, 418, 809
CseI GACGC 1 cut(s) 350
Csp6I GTAC 4 cut(s) 423, 554, 759, 1438
CviQI GTAC 4 cut(s) 423, 554, 759, 1438
DdeI CTNAG 5 cut(s) 671, 703, 805, 840, 1234
DpnI GATC 6 cut(s) 278, 462, 581, 793, 880, 1149
DpnII GATC 6 cut(s) 276, 460, 579, 791, 878, 1147
DraIII CACNNNGTG 1 cut(s) 755
EaeI YGGCCR 2 cut(s) 172, 394
Eam1104I CTCTTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 263
Eco130I CCWWGG 4 cut(s) 397, 570, 1166, 1387
Eco147I AGGCCT 1 cut(s) 1165
Eco47I GGWCC 1 cut(s) 809
Eco57I CTGAAG 1 cut(s) 68
EcoRI GAATTC 1 cut(s) 516
EcoRII CCWGG 1 cut(s) 1308
EcoT14I CCWWGG 4 cut(s) 397, 570, 1166, 1387
EcoT22I ATGCAT 1 cut(s) 513
ErhI CCWWGG 4 cut(s) 397, 570, 1166, 1387
Esp3I CGTCTC 1 cut(s) 373
FalI AAGNNNNNCTT 2 cut(s) 1083, 1115
FaqI GGGAC 1 cut(s) 206
FbaI TGATCA 3 cut(s) 460, 579, 1147
FblI GTMKAC 1 cut(s) 1041
Fnu4HI GCNGC 4 cut(s) 605, 668, 676, 771
FokI GGATG 2 cut(s) 587, 1229
Fsp4HI GCNGC 4 cut(s) 605, 668, 676, 771
FspBI CTAG 5 cut(s) 149, 189, 1167, 1284, 1444
GluI GCNGC 4 cut(s) 605, 668, 676, 771
GsuI CTGGAG 3 cut(s) 56, 281, 1331
HaeIII GGCC 7 cut(s) 167, 174, 396, 420, 1128, 1165, 1409
HapII CCGG 5 cut(s) 95, 168, 393, 1110, 1262
HgaI GACGC 1 cut(s) 350
HindIII AAGCTT 2 cut(s) 953, 1014
HinfI GANTC 8 cut(s) 626, 688, 803, 818, 908, 966, 1079, 1392
HpaII CCGG 5 cut(s) 95, 168, 393, 1110, 1262
HphI GGTGA 5 cut(s) 45, 224, 470, 903, 1145
Hpy166II GTNNAC 4 cut(s) 355, 387, 781, 1042
Hpy188I TCNGA 6 cut(s) 87, 631, 802, 817, 1030, 1237
Hpy188III TCNNGA 9 cut(s) 44, 260, 464, 683, 723, 807, 1002, 1262, 1364
Hpy8I GTNNAC 4 cut(s) 355, 387, 781, 1042
HpyCH4III ACNGT 5 cut(s) 326, 367, 813, 890, 962
HpyCH4IV ACGT 2 cut(s) 425, 783
HpyCH4V TGCA 5 cut(s) 511, 539, 604, 1034, 1331
HpyF10VI GCNNNNNNNGC 4 cut(s) 952, 1134, 1202, 1341
HpyF3I CTNAG 5 cut(s) 671, 703, 805, 840, 1234
HpySE526I ACGT 2 cut(s) 425, 783
Kpn2I TCCGGA 1 cut(s) 1261
KroI GCCGGC 1 cut(s) 392
KroNI GCCGGC 1 cut(s) 394
Ksp22I TGATCA 3 cut(s) 460, 579, 1147
Kzo9I GATC 6 cut(s) 276, 460, 579, 791, 878, 1147
LmnI GCTCC 3 cut(s) 725, 778, 1142
Lsp1109I GCAGC 4 cut(s) 616, 679, 687, 782
LweI GCATC 2 cut(s) 1021, 1347
MaeI CTAG 5 cut(s) 149, 189, 1167, 1284, 1444
MaeII ACGT 2 cut(s) 425, 783
MaeIII GTNAC 4 cut(s) 334, 407, 1245, 1314
MalI GATC 6 cut(s) 278, 462, 581, 793, 880, 1149
MbiI CCGCTC 1 cut(s) 981
MboI GATC 6 cut(s) 276, 460, 579, 791, 878, 1147
MboII GAAGA 5 cut(s) 18, 280, 320, 888, 1234
MfeI CAATTG 1 cut(s) 1073
MhlI GDGCHC 1 cut(s) 1386
MlsI TGGCCA 1 cut(s) 174
MluCI AATT 9 cut(s) 9, 34, 114, 242, 473, 516, 589, 1073, 1086
MluNI TGGCCA 1 cut(s) 174
MlyI GAGTC 3 cut(s) 797, 812, 1088
MmeI TCCRAC 1 cut(s) 805
Mox20I TGGCCA 1 cut(s) 174
Mph1103I ATGCAT 1 cut(s) 513
MroI TCCGGA 1 cut(s) 1261
MroNI GCCGGC 1 cut(s) 392
MroXI GAANNNNTTC 1 cut(s) 718
MscI TGGCCA 1 cut(s) 174
MseI TTAA 5 cut(s) 374, 833, 863, 957, 1347
MslI CAYNNNNRTG 1 cut(s) 141
Msp20I TGGCCA 1 cut(s) 174
MspA1I CMGCKG 1 cut(s) 670
MspI CCGG 5 cut(s) 95, 168, 393, 1110, 1262
MspR9I CCNGG 3 cut(s) 95, 1110, 1310
MunI CAATTG 1 cut(s) 1073
Mva1269I GAATGC 1 cut(s) 513
MvaI CCWGG 1 cut(s) 1310
MwoI GCNNNNNNNGC 4 cut(s) 952, 1134, 1202, 1341
NaeI GCCGGC 1 cut(s) 394
NciI CCSGG 2 cut(s) 95, 1110
NcoI CCATGG 1 cut(s) 1387
NdeII GATC 6 cut(s) 276, 460, 579, 791, 878, 1147
NgoMIV GCCGGC 1 cut(s) 392
NsiI ATGCAT 1 cut(s) 513
NspV TTCGAA 1 cut(s) 624
PagI TCATGA 1 cut(s) 463
PaqCI CACCTGC 2 cut(s) 446, 1187
PceI AGGCCT 1 cut(s) 1165
PctI GAATGC 1 cut(s) 513
PdiI GCCGGC 1 cut(s) 394
PdmI GAANNNNTTC 1 cut(s) 718
PfeI GAWTC 5 cut(s) 626, 688, 908, 966, 1392
Pfl23II CGTACG 1 cut(s) 422
PkrI GCNGC 4 cut(s) 606, 669, 677, 772
PleI GAGTC 3 cut(s) 797, 812, 1087
PpsI GAGTC 3 cut(s) 797, 812, 1087
PsiI TTATAA 1 cut(s) 1185
Psp1406I AACGTT 1 cut(s) 783
Psp6I CCWGG 1 cut(s) 1308
PspGI CCWGG 1 cut(s) 1308
PspLI CGTACG 1 cut(s) 422
PspPI GGNCC 3 cut(s) 165, 418, 809
PsrI GAACNNNNNNTAC 2 cut(s) 415, 447
PstNI CAGNNNCTG 2 cut(s) 728, 776
PvuII CAGCTG 1 cut(s) 670
RsaI GTAC 4 cut(s) 424, 555, 760, 1439
RsaNI GTAC 4 cut(s) 423, 554, 759, 1438
RseI CAYNNNNRTG 1 cut(s) 141
SaqAI TTAA 5 cut(s) 374, 833, 863, 957, 1347
SatI GCNGC 4 cut(s) 605, 668, 676, 771
Sau3AI GATC 6 cut(s) 276, 460, 579, 791, 878, 1147
Sau96I GGNCC 3 cut(s) 165, 418, 809
ScaI AGTACT 1 cut(s) 555
SchI GAGTC 3 cut(s) 797, 812, 1088
ScrFI CCNGG 3 cut(s) 95, 1110, 1310
SduI GDGCHC 1 cut(s) 1386
SfaNI GCATC 2 cut(s) 1021, 1347
SfuI TTCGAA 1 cut(s) 624
SinI GGWCC 1 cut(s) 809
SmiMI CAYNNNNRTG 1 cut(s) 141
SmlI CTYRAG 1 cut(s) 683
SmoI CTYRAG 1 cut(s) 683
Sse9I AATT 9 cut(s) 9, 34, 114, 242, 473, 516, 589, 1073, 1086
SseBI AGGCCT 1 cut(s) 1165
SsiI CCGC 4 cut(s) 91, 549, 639, 979
SspMI CTAG 5 cut(s) 149, 189, 1167, 1284, 1444
StuI AGGCCT 1 cut(s) 1165
StyD4I CCNGG 3 cut(s) 93, 1108, 1308
StyI CCWWGG 4 cut(s) 397, 570, 1166, 1387
TaaI ACNGT 5 cut(s) 326, 367, 813, 890, 962
TaiI ACGT 2 cut(s) 428, 786
TaqI TCGA 4 cut(s) 252, 624, 859, 964
TasI AATT 9 cut(s) 9, 34, 114, 242, 473, 516, 589, 1073, 1086
TatI WGTACW 1 cut(s) 553
TfiI GAWTC 5 cut(s) 626, 688, 908, 966, 1392
Tru1I TTAA 5 cut(s) 374, 833, 863, 957, 1347
Tru9I TTAA 5 cut(s) 374, 833, 863, 957, 1347
TscAI CASTG 1 cut(s) 1262
TseI GCWGC 4 cut(s) 604, 667, 675, 770
TspDTI ATGAA 3 cut(s) 321, 480, 1307
TspRI CASTG 1 cut(s) 1262
VpaK11BI GGWCC 1 cut(s) 809
XapI RAATTY 3 cut(s) 34, 516, 1086
XmaJI CCTAGG 1 cut(s) 1166
XmiI GTMKAC 1 cut(s) 1041
XmnI GAANNNNTTC 1 cut(s) 718
XspI CTAG 5 cut(s) 149, 189, 1167, 1284, 1444
ZrmI AGTACT 1 cut(s) 555
Zsp2I ATGCAT 1 cut(s) 513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.