Prupe.5G130500_v2.0.a1
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000212
Physical Location & Seq
Forward (+)
12607334 .. 12609474
2141 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G130500.1

Sequence Viewer

Length: 1473 bp
ATGGAAGACATTATCTCCCCATGTTCTTCACCCAAATTTGGTCAAGAAAACTCAGCCACATTTCATCAGCGTCTCCAATTCATAGTTCAGAACAGGCCTGAATGGTGGGCGTATTCGATTTTCTGGCAAGCCTCCAAAGACAACAATGATGACCAAGTTGTTTTGTCATGGGCTGGTGGCCATTTCAAAAGCTCAAGGGATTTTGCATCCAAAAGAAGCAACAAAATGACCAATAATTACCAACCCAAATTTGGGTTCAGCAGTGTGGAGAGAAAGAATGTGAATAACAGAGAAGTTGAAGTTCTTTTCGATGAAGAAGACATGGTGGACTTGGACACGAGTCTTGTTGATCATGGAGTTGGAGATGTTACTGATTCTGAGTGGTTTTACTTTTACACTGTTTCTTTAACCCAATCATTTGCTGCAGGCCATGGTAATAATAGTATTCTGGACCGTGCGTTTTGCTCTGGTGGTTTTGTTTGGCTTGCAGGTGACCATGAGCTTCAGTTTTATGAGTGTGAGAGAGTGAAAGAAGCTAGAATGCATGGAATTCAAACTCTGGTTTGTGTTGCAACTCCATGTGGCGTACTTGAACTTGCTTCTTTGGATGTGATCAAAGAAGATTGGGGCCTTGTGCACTTATCCAAATCCCTCTTTGAATCAAACAATAACAGGGTCTCAAAGCAGGGTAGCCGTGACGGCAATGTACTAGTTTCTCTCCTGGAGAATGAGATGTTTTCAGGAGGTCAAAAAGATTTGACCAGACAAGAATGTTGTGTAAAAGAAGCTACGCCTGTCAATATAGGTGGATCATCATCAGACTCACCTTCTGACTCTGTTGGTAATTTCACCTCTGCGAATGCAAAAAACATTCGATTGAAAAAGAGAGGAAGATCATCAAACCATGGAACTGGTAGAGAATCATCAACCCATGTTGAGGCAGAAAGACAAAGACGCGAGAAGCTTAACCATCGATTCTATGTCCTCCGCTCTGTTGTTCCGAATGTGTCGAAAATGGACAGGTCCTCTTTGCTTGCTGATGCTGTGGCATACATCAATCAGCTCAAAGAAAAAGTTGAGGAATTGGAGGCAAAGATCCAAGCACAACCCCAAAATCCCAAAGTAGGCCATGTGAGCAATCTTGATCATCATCATCATCACAACAGCCAAAGCACCGGCTCCATAGTTGATCATCATAGTTCAAGTTATAATATTAATAAAGCAGGTGCTGCTCTGGAAGTGGATGTGAAGATTTTGGGCTCAGAAGCCATGATAAGAGTTCAGTGTCCTGATCAAGATTACCCGTATGCTAAATTGATGAATGCACTCAAAGCCCTAGGGTTTCAAGTTTACCATGCAAGCATTTCAAGTGTGAAAGAGTTAATGATTCAAGATGTTGTAGCAAGAGTACCTTATGGGTTCAACAGTGAGGAGGCAGTCAAAATGGGTATTATAAAAAGATGGTACAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

491

Amino Acids

54.99

Weight (kDa)

6.26

Isoelectric Point (pI)

44.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1209, 1454
AarI CACCTGC 2 cut(s) 479, 1214
Acc36I ACCTGC 2 cut(s) 479, 1214
AccBSI CCGCTC 1 cut(s) 990
AccII CGCG 1 cut(s) 957
AciI CCGC 1 cut(s) 988
AclWI GGATC 2 cut(s) 817, 1090
AcoI YGGCCR 1 cut(s) 178
AcsI RAATTY 3 cut(s) 35, 248, 549
AcuI CTGAAG 1 cut(s) 488
AfaI GTAC 4 cut(s) 588, 708, 1410, 1466
AfiI CCNNNNNNNGG 5 cut(s) 38, 251, 252, 937, 1124
AhlI ACTAGT 1 cut(s) 709
AjnI CCWGG 1 cut(s) 720
AjuI GAANNNNNNNTTGG 4 cut(s) 69, 101, 239, 271
AluBI AGCT 6 cut(s) 192, 502, 536, 788, 964, 1063
AluI AGCT 6 cut(s) 192, 502, 536, 788, 964, 1063
Alw21I GWGCWC 1 cut(s) 639
Alw26I GTCTC 2 cut(s) 77, 682
Alw44I GTGCAC 1 cut(s) 635
AlwI GGATC 2 cut(s) 817, 1090
AlwNI CAGNNNCTG 1 cut(s) 1229
AoxI GGCC 5 cut(s) 95, 178, 427, 628, 1126
ApaLI GTGCAC 1 cut(s) 635
ApeKI GCWGC 2 cut(s) 422, 1229
ApoI RAATTY 3 cut(s) 35, 248, 549
AseI ATTAAT 1 cut(s) 1215
AspA2I CCTAGG 1 cut(s) 1336
AspS9I GGNCC 3 cut(s) 451, 628, 1023
AsuHPI GGTGA 4 cut(s) 21, 503, 816, 841
AvaII GGWCC 2 cut(s) 451, 1023
AvrII CCTAGG 1 cut(s) 1336
BaeGI GKGCMC 1 cut(s) 639
BalI TGGCCA 1 cut(s) 180
BanII GRGCYC 1 cut(s) 1262
BauI CACGAG 1 cut(s) 337
BbsI GAAGAC 2 cut(s) 12, 324
Bbv12I GWGCWC 1 cut(s) 639
BbvI GCAGC 2 cut(s) 409, 1216
BccI CCATC 2 cut(s) 978, 1455
BceAI ACGGC 2 cut(s) 678, 715
BciT130I CCWGG 1 cut(s) 722
BclI TGATCA 5 cut(s) 349, 612, 1144, 1189, 1291
BcoDI GTCTC 2 cut(s) 77, 682
BcuI ACTAGT 1 cut(s) 709
BfaI CTAG 4 cut(s) 537, 710, 1337, 1471
BfmI CTRYAG 1 cut(s) 423
BfuAI ACCTGC 2 cut(s) 479, 1214
BglI GCCNNNNNGGC 1 cut(s) 699
BisI GCNGC 2 cut(s) 423, 1230
BlnI CCTAGG 1 cut(s) 1336
BlsI GCNGC 2 cut(s) 424, 1231
Bme1390I CCNGG 1 cut(s) 722
Bme18I GGWCC 2 cut(s) 451, 1023
BmgT120I GGNCC 3 cut(s) 451, 628, 1023
BmiI GGNNCC 2 cut(s) 629, 1180
BmrFI CCNGG 1 cut(s) 722
BmsI GCATC 2 cut(s) 215, 1030
BoxI GACNNNNGTC 1 cut(s) 339
BpiI GAAGAC 2 cut(s) 12, 324
BpmI CTGGAG 1 cut(s) 743
BpuEI CTTGAG 1 cut(s) 178
Bsa29I ATCGAT 1 cut(s) 973
BsaBI GATNNNNATC 2 cut(s) 814, 1149
BsaI GGTCTC 1 cut(s) 682
BsaJI CCNNGG 3 cut(s) 430, 904, 1336
BsaXI ACNNNNNCTCC 1 cut(s) 29
Bsc4I CCNNNNNNNGG 5 cut(s) 38, 251, 252, 937, 1124
Bse118I RCCGGY 1 cut(s) 1175
Bse1I ACTGG 1 cut(s) 916
Bse3DI GCAATG 1 cut(s) 709
Bse8I GATNNNNATC 2 cut(s) 814, 1149
BseBI CCWGG 1 cut(s) 722
BseCI ATCGAT 1 cut(s) 973
BseDI CCNNGG 3 cut(s) 430, 904, 1336
BseGI GGATG 3 cut(s) 206, 613, 1249
BseJI GATNNNNATC 2 cut(s) 814, 1149
BseLI CCNNNNNNNGG 5 cut(s) 38, 251, 252, 937, 1124
BseMI GCAATG 1 cut(s) 709
BseMII CTCAG 3 cut(s) 66, 369, 1275
BseNI ACTGG 1 cut(s) 916
BseRI GAGGAG 1 cut(s) 1445
BseSI GKGCMC 1 cut(s) 639
BseXI GCAGC 2 cut(s) 409, 1216
Bsh1236I CGCG 1 cut(s) 957
BshFI GGCC 5 cut(s) 97, 180, 429, 630, 1128
BshVI ATCGAT 1 cut(s) 973
BsiHKAI GWGCWC 1 cut(s) 639
BsiSI CCGG 1 cut(s) 1176
BslI CCNNNNNNNGG 5 cut(s) 38, 251, 252, 937, 1124
BsmAI GTCTC 2 cut(s) 77, 682
BsmBI CGTCTC 1 cut(s) 77
BsmI GAATGC 3 cut(s) 546, 865, 1327
BsnI GGCC 5 cut(s) 97, 180, 429, 630, 1128
Bso31I GGTCTC 1 cut(s) 682
Bsp1286I GDGCHC 2 cut(s) 639, 1262
Bsp143I GATC 8 cut(s) 349, 612, 809, 893, 1095, 1144, 1189, 1291
Bsp19I CCATGG 2 cut(s) 430, 904
BspACI CCGC 1 cut(s) 988
BspANI GGCC 5 cut(s) 97, 180, 429, 630, 1128
BspCNI CTCAG 3 cut(s) 65, 370, 1274
BspDI ATCGAT 1 cut(s) 973
BspFNI CGCG 1 cut(s) 957
BspLI GGNNCC 2 cut(s) 629, 1180
BspMAI CTGCAG 1 cut(s) 427
BspMI ACCTGC 2 cut(s) 479, 1214
BspPI GGATC 2 cut(s) 817, 1090
BspTNI GGTCTC 1 cut(s) 682
BsrBI CCGCTC 1 cut(s) 990
BsrDI GCAATG 1 cut(s) 709
BsrFI RCCGGY 1 cut(s) 1175
BsrI ACTGG 1 cut(s) 916
BssAI RCCGGY 1 cut(s) 1175
BssECI CCNNGG 3 cut(s) 430, 904, 1336
BssMI GATC 8 cut(s) 349, 612, 809, 893, 1095, 1144, 1189, 1291
BssSI CACGAG 1 cut(s) 337
BssT1I CCWWGG 3 cut(s) 430, 904, 1336
Bst2BI CACGAG 1 cut(s) 337
Bst2UI CCWGG 1 cut(s) 722
Bst4CI ACNGT 3 cut(s) 400, 455, 1427
BstAPI GCANNNNNTGC 1 cut(s) 1229
BstC8I GCNNGC 5 cut(s) 129, 427, 486, 1035, 1360
BstDEI CTNAG 3 cut(s) 52, 378, 1261
BstDSI CCRYGG 2 cut(s) 430, 904
BstEII GGTNACC 1 cut(s) 491
BstF5I GGATG 3 cut(s) 206, 613, 1249
BstFNI CGCG 1 cut(s) 957
BstKTI GATC 8 cut(s) 352, 615, 812, 896, 1098, 1147, 1192, 1294
BstMAI GTCTC 2 cut(s) 77, 682
BstMBI GATC 8 cut(s) 349, 612, 809, 893, 1095, 1144, 1189, 1291
BstMWI GCNNNNNNNGC 4 cut(s) 699, 1134, 1229, 1331
BstNI CCWGG 1 cut(s) 722
BstPAI GACNNNNGTC 1 cut(s) 339
BstPI GGTNACC 1 cut(s) 491
BstSCI CCNGG 1 cut(s) 720
BstSFI CTRYAG 1 cut(s) 423
BstSLI GKGCMC 1 cut(s) 639
BstUI CGCG 1 cut(s) 957
BstV1I GCAGC 2 cut(s) 409, 1216
BstV2I GAAGAC 2 cut(s) 12, 324
BstX2I RGATCY 1 cut(s) 1095
BstXI CCANNNNNNTGG 1 cut(s) 911
BstYI RGATCY 1 cut(s) 1095
Bsu15I ATCGAT 1 cut(s) 973
BsuRI GGCC 5 cut(s) 97, 180, 429, 630, 1128
BsuTUI ATCGAT 1 cut(s) 973
BtgI CCRYGG 2 cut(s) 430, 904
BtsCI GGATG 3 cut(s) 206, 613, 1249
BtsI GCAGTG 1 cut(s) 268
BtsIMutI CAGTG 4 cut(s) 268, 396, 1289, 1432
BveI ACCTGC 2 cut(s) 479, 1214
Cac8I GCNNGC 5 cut(s) 129, 427, 486, 1035, 1360
CaiI CAGNNNCTG 1 cut(s) 1229
Cfr10I RCCGGY 1 cut(s) 1175
Cfr13I GGNCC 3 cut(s) 451, 628, 1023
ClaI ATCGAT 1 cut(s) 973
CseI GACGC 2 cut(s) 59, 963
Csp6I GTAC 4 cut(s) 587, 707, 1409, 1465
CspCI CAANNNNNGTGG 2 cut(s) 787, 822
CviQI GTAC 4 cut(s) 587, 707, 1409, 1465
DdeI CTNAG 3 cut(s) 52, 378, 1261
DpnI GATC 8 cut(s) 351, 614, 811, 895, 1097, 1146, 1191, 1293
DpnII GATC 8 cut(s) 349, 612, 809, 893, 1095, 1144, 1189, 1291
EaeI YGGCCR 1 cut(s) 178
Eco130I CCWWGG 3 cut(s) 430, 904, 1336
Eco147I AGGCCT 1 cut(s) 97
Eco24I GRGCYC 1 cut(s) 1262
Eco31I GGTCTC 1 cut(s) 682
Eco47I GGWCC 2 cut(s) 451, 1023
Eco57I CTGAAG 1 cut(s) 488
Eco91I GGTNACC 1 cut(s) 491
EcoO109I RGGNCCY 2 cut(s) 628, 1023
EcoO65I GGTNACC 1 cut(s) 491
EcoRI GAATTC 1 cut(s) 549
EcoRII CCWGG 1 cut(s) 720
EcoT14I CCWWGG 3 cut(s) 430, 904, 1336
EcoT22I ATGCAT 1 cut(s) 546
EcoT38I GRGCYC 1 cut(s) 1262
ErhI CCWWGG 3 cut(s) 430, 904, 1336
Esp3I CGTCTC 1 cut(s) 77
FalI AAGNNNNNCTT 2 cut(s) 1396, 1428
FbaI TGATCA 5 cut(s) 349, 612, 1144, 1189, 1291
Fnu4HI GCNGC 2 cut(s) 423, 1230
FokI GGATG 3 cut(s) 193, 620, 1256
FriOI GRGCYC 1 cut(s) 1262
Fsp4HI GCNGC 2 cut(s) 423, 1230
FspBI CTAG 4 cut(s) 537, 710, 1337, 1471
GluI GCNGC 2 cut(s) 423, 1230
GsuI CTGGAG 1 cut(s) 743
HaeIII GGCC 5 cut(s) 97, 180, 429, 630, 1128
HapII CCGG 1 cut(s) 1176
HgaI GACGC 2 cut(s) 59, 963
HindIII AAGCTT 1 cut(s) 962
HinfI GANTC 8 cut(s) 340, 374, 659, 821, 833, 920, 975, 1387
HpaII CCGG 1 cut(s) 1176
HphI GGTGA 4 cut(s) 21, 503, 816, 841
Hpy166II GTNNAC 3 cut(s) 328, 637, 1351
Hpy188I TCNGA 6 cut(s) 90, 379, 820, 832, 1002, 1264
Hpy188III TCNNGA 8 cut(s) 44, 449, 741, 1142, 1235, 1289, 1295, 1391
Hpy8I GTNNAC 3 cut(s) 328, 637, 1351
HpyAV CCTTC 1 cut(s) 837
HpyCH4III ACNGT 3 cut(s) 400, 455, 1427
HpyCH4V TGCA 9 cut(s) 206, 425, 488, 544, 572, 637, 863, 1325, 1358
HpyF10VI GCNNNNNNNGC 4 cut(s) 699, 1134, 1229, 1331
HpyF3I CTNAG 3 cut(s) 52, 378, 1261
Ksp22I TGATCA 5 cut(s) 349, 612, 1144, 1189, 1291
Kzo9I GATC 8 cut(s) 349, 612, 809, 893, 1095, 1144, 1189, 1291
LmnI GCTCC 1 cut(s) 1184
Lsp1109I GCAGC 2 cut(s) 409, 1216
LweI GCATC 2 cut(s) 215, 1030
MaeI CTAG 4 cut(s) 537, 710, 1337, 1471
MaeIII GTNAC 3 cut(s) 367, 491, 695
MalI GATC 8 cut(s) 351, 614, 811, 895, 1097, 1146, 1191, 1293
MbiI CCGCTC 1 cut(s) 990
MboI GATC 8 cut(s) 349, 612, 809, 893, 1095, 1144, 1189, 1291
MboII GAAGA 7 cut(s) 17, 18, 326, 329, 632, 903, 1261
MflI RGATCY 1 cut(s) 1095
MhlI GDGCHC 2 cut(s) 639, 1262
MlsI TGGCCA 1 cut(s) 180
MluCI AATT 8 cut(s) 35, 77, 235, 248, 549, 844, 1082, 1313
MluNI TGGCCA 1 cut(s) 180
MlyI GAGTC 3 cut(s) 349, 815, 827
MmeI TCCRAC 1 cut(s) 340
Mox20I TGGCCA 1 cut(s) 180
Mph1103I ATGCAT 1 cut(s) 546
MscI TGGCCA 1 cut(s) 180
MseI TTAA 4 cut(s) 407, 966, 1215, 1382
Msp20I TGGCCA 1 cut(s) 180
MspI CCGG 1 cut(s) 1176
MspR9I CCNGG 1 cut(s) 722
Mva1269I GAATGC 3 cut(s) 546, 865, 1327
MvaI CCWGG 1 cut(s) 722
MvnI CGCG 1 cut(s) 957
MwoI GCNNNNNNNGC 4 cut(s) 699, 1134, 1229, 1331
NcoI CCATGG 2 cut(s) 430, 904
NdeII GATC 8 cut(s) 349, 612, 809, 893, 1095, 1144, 1189, 1291
NlaIV GGNNCC 2 cut(s) 629, 1180
NmuCI GTSAC 2 cut(s) 491, 695
NsiI ATGCAT 1 cut(s) 546
PaqCI CACCTGC 2 cut(s) 479, 1214
PceI AGGCCT 1 cut(s) 97
PctI GAATGC 3 cut(s) 546, 865, 1327
PfeI GAWTC 5 cut(s) 374, 659, 920, 975, 1387
PfoI TCCNGGA 1 cut(s) 720
PkrI GCNGC 2 cut(s) 424, 1231
PleI GAGTC 3 cut(s) 348, 815, 827
PpsI GAGTC 3 cut(s) 348, 815, 827
PpuMI RGGWCCY 1 cut(s) 1023
PshAI GACNNNNGTC 1 cut(s) 339
PshBI ATTAAT 1 cut(s) 1215
PsiI TTATAA 2 cut(s) 1209, 1454
Psp5II RGGWCCY 1 cut(s) 1023
Psp6I CCWGG 1 cut(s) 720
PspEI GGTNACC 1 cut(s) 491
PspGI CCWGG 1 cut(s) 720
PspN4I GGNNCC 2 cut(s) 629, 1180
PspPI GGNCC 3 cut(s) 451, 628, 1023
PspPPI RGGWCCY 1 cut(s) 1023
PstI CTGCAG 1 cut(s) 427
PstNI CAGNNNCTG 1 cut(s) 1229
PsuI RGATCY 1 cut(s) 1095
RsaI GTAC 4 cut(s) 588, 708, 1410, 1466
RsaNI GTAC 4 cut(s) 587, 707, 1409, 1465
SaqAI TTAA 4 cut(s) 407, 966, 1215, 1382
SatI GCNGC 2 cut(s) 423, 1230
Sau3AI GATC 8 cut(s) 349, 612, 809, 893, 1095, 1144, 1189, 1291
Sau96I GGNCC 3 cut(s) 451, 628, 1023
SchI GAGTC 3 cut(s) 349, 815, 827
ScrFI CCNGG 1 cut(s) 722
SduI GDGCHC 2 cut(s) 639, 1262
SfaNI GCATC 2 cut(s) 215, 1030
SfcI CTRYAG 1 cut(s) 423
SinI GGWCC 2 cut(s) 451, 1023
SmlI CTYRAG 1 cut(s) 193
SmoI CTYRAG 1 cut(s) 193
SpeI ACTAGT 1 cut(s) 709
Sse9I AATT 8 cut(s) 35, 77, 235, 248, 549, 844, 1082, 1313
SseBI AGGCCT 1 cut(s) 97
SsiI CCGC 1 cut(s) 988
SspI AATATT 1 cut(s) 1213
SspMI CTAG 4 cut(s) 537, 710, 1337, 1471
StuI AGGCCT 1 cut(s) 97
StyD4I CCNGG 1 cut(s) 720
StyI CCWWGG 3 cut(s) 430, 904, 1336
TaaI ACNGT 3 cut(s) 400, 455, 1427
TaqI TCGA 5 cut(s) 116, 309, 874, 973, 1010
TasI AATT 8 cut(s) 35, 77, 235, 248, 549, 844, 1082, 1313
TatI WGTACW 1 cut(s) 706
TfiI GAWTC 5 cut(s) 374, 659, 920, 975, 1387
Tru1I TTAA 4 cut(s) 407, 966, 1215, 1382
Tru9I TTAA 4 cut(s) 407, 966, 1215, 1382
TscAI CASTG 4 cut(s) 268, 403, 1289, 1432
TseFI GTSAC 2 cut(s) 491, 695
TseI GCWGC 2 cut(s) 422, 1229
Tsp45I GTSAC 2 cut(s) 491, 695
TspDTI ATGAA 4 cut(s) 53, 70, 327, 1334
TspRI CASTG 4 cut(s) 268, 403, 1289, 1432
VneI GTGCAC 1 cut(s) 635
VpaK11BI GGWCC 2 cut(s) 451, 1023
VspI ATTAAT 1 cut(s) 1215
XapI RAATTY 3 cut(s) 35, 248, 549
XcmI CCANNNNNNNNNTGG 1 cut(s) 248
XmaJI CCTAGG 1 cut(s) 1336
XspI CTAG 4 cut(s) 537, 710, 1337, 1471
Zsp2I ATGCAT 1 cut(s) 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.