transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 252 |
| AccIII | TCCGGA | 1 cut(s) | 41 |
| AciI | CCGC | 1 cut(s) | 597 |
| AclWI | GGATC | 1 cut(s) | 34 |
| AcsI | RAATTY | 1 cut(s) | 498 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 139 |
| AgsI | TTSAA | 3 cut(s) | 268, 491, 542 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 118, 150 |
| AluBI | AGCT | 2 cut(s) | 166, 227 |
| AluI | AGCT | 2 cut(s) | 166, 227 |
| Alw26I | GTCTC | 3 cut(s) | 142, 214, 477 |
| AlwI | GGATC | 1 cut(s) | 34 |
| Aor13HI | TCCGGA | 1 cut(s) | 41 |
| AoxI | GGCC | 1 cut(s) | 291 |
| ApoI | RAATTY | 1 cut(s) | 498 |
| AseI | ATTAAT | 1 cut(s) | 606 |
| AspS9I | GGNCC | 2 cut(s) | 44, 192 |
| AsuC2I | CCSGG | 1 cut(s) | 158 |
| AsuHPI | GGTGA | 1 cut(s) | 114 |
| AsuII | TTCGAA | 1 cut(s) | 137 |
| AvaII | GGWCC | 2 cut(s) | 44, 192 |
| AxyI | CCTNAGG | 1 cut(s) | 188 |
| BbsI | GAAGAC | 1 cut(s) | 275 |
| BccI | CCATC | 2 cut(s) | 211, 560 |
| BcnI | CCSGG | 1 cut(s) | 158 |
| BcoDI | GTCTC | 3 cut(s) | 142, 214, 477 |
| BfaI | CTAG | 3 cut(s) | 69, 462, 519 |
| BglII | AGATCT | 1 cut(s) | 89 |
| Bme1390I | CCNGG | 1 cut(s) | 158 |
| Bme18I | GGWCC | 2 cut(s) | 44, 192 |
| BmgT120I | GGNCC | 2 cut(s) | 44, 192 |
| BmrFI | CCNGG | 1 cut(s) | 158 |
| BmsI | GCATC | 2 cut(s) | 232, 339 |
| BpiI | GAAGAC | 1 cut(s) | 275 |
| Bpu14I | TTCGAA | 1 cut(s) | 137 |
| BpuMI | CCSGG | 1 cut(s) | 158 |
| BsaBI | GATNNNNATC | 1 cut(s) | 31 |
| BsaI | GGTCTC | 1 cut(s) | 477 |
| BsaWI | WCCGGW | 1 cut(s) | 41 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 139 |
| Bse21I | CCTNAGG | 1 cut(s) | 188 |
| Bse8I | GATNNNNATC | 1 cut(s) | 31 |
| BseAI | TCCGGA | 1 cut(s) | 41 |
| BseGI | GGATG | 1 cut(s) | 397 |
| BseJI | GATNNNNATC | 1 cut(s) | 31 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BseMII | CTCAG | 1 cut(s) | 493 |
| BseRI | GAGGAG | 2 cut(s) | 296, 596 |
| BsgI | GTGCAG | 1 cut(s) | 416 |
| Bsh1285I | CGRYCG | 1 cut(s) | 279 |
| BshFI | GGCC | 1 cut(s) | 293 |
| BsiEI | CGRYCG | 1 cut(s) | 279 |
| BsiSI | CCGG | 2 cut(s) | 42, 157 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 139 |
| BsmAI | GTCTC | 3 cut(s) | 142, 214, 477 |
| BsmI | GAATGC | 1 cut(s) | 478 |
| BsnI | GGCC | 1 cut(s) | 293 |
| Bso31I | GGTCTC | 1 cut(s) | 477 |
| Bsp119I | TTCGAA | 1 cut(s) | 137 |
| Bsp13I | TCCGGA | 1 cut(s) | 41 |
| Bsp143I | GATC | 3 cut(s) | 26, 89, 276 |
| BspACI | CCGC | 1 cut(s) | 597 |
| BspANI | GGCC | 1 cut(s) | 293 |
| BspCNI | CTCAG | 1 cut(s) | 492 |
| BspEI | TCCGGA | 1 cut(s) | 41 |
| BspHI | TCATGA | 1 cut(s) | 333 |
| BspPI | GGATC | 1 cut(s) | 34 |
| BspT104I | TTCGAA | 1 cut(s) | 137 |
| BspTNI | GGTCTC | 1 cut(s) | 477 |
| BssMI | GATC | 3 cut(s) | 26, 89, 276 |
| BssNAI | GTATAC | 1 cut(s) | 253 |
| Bst1107I | GTATAC | 1 cut(s) | 253 |
| Bst4CI | ACNGT | 1 cut(s) | 13 |
| BstBI | TTCGAA | 1 cut(s) | 137 |
| BstC8I | GCNNGC | 2 cut(s) | 511, 577 |
| BstDEI | CTNAG | 4 cut(s) | 20, 188, 312, 479 |
| BstF5I | GGATG | 1 cut(s) | 397 |
| BstKTI | GATC | 3 cut(s) | 29, 92, 279 |
| BstMAI | GTCTC | 3 cut(s) | 142, 214, 477 |
| BstMBI | GATC | 3 cut(s) | 26, 89, 276 |
| BstMCI | CGRYCG | 1 cut(s) | 279 |
| BstNSI | RCATGY | 2 cut(s) | 104, 389 |
| BstSCI | CCNGG | 1 cut(s) | 156 |
| BstV2I | GAAGAC | 1 cut(s) | 275 |
| BstX2I | RGATCY | 2 cut(s) | 26, 89 |
| BstYI | RGATCY | 2 cut(s) | 26, 89 |
| BstZ17I | GTATAC | 1 cut(s) | 253 |
| Bsu36I | CCTNAGG | 1 cut(s) | 188 |
| BsuRI | GGCC | 1 cut(s) | 293 |
| BtsCI | GGATG | 1 cut(s) | 397 |
| BtsI | GCAGTG | 1 cut(s) | 369 |
| BtsIMutI | CAGTG | 1 cut(s) | 369 |
| Cac8I | GCNNGC | 2 cut(s) | 511, 577 |
| CciI | TCATGA | 1 cut(s) | 333 |
| Cfr13I | GGNCC | 2 cut(s) | 44, 192 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 4, 39 |
| CviAII | CATG | 4 cut(s) | 101, 334, 386, 456 |
| CviJI | RGCY | 6 cut(s) | 132, 166, 227, 293, 357, 416 |
| CviKI_1 | RGCY | 6 cut(s) | 132, 166, 227, 293, 357, 416 |
| DdeI | CTNAG | 4 cut(s) | 20, 188, 312, 479 |
| DpnI | GATC | 3 cut(s) | 28, 91, 278 |
| DpnII | GATC | 3 cut(s) | 26, 89, 276 |
| Eco31I | GGTCTC | 1 cut(s) | 477 |
| Eco47I | GGWCC | 2 cut(s) | 44, 192 |
| Eco81I | CCTNAGG | 1 cut(s) | 188 |
| EcoRI | GAATTC | 1 cut(s) | 498 |
| FaeI | CATG | 4 cut(s) | 104, 337, 389, 459 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 13, 45 |
| FatI | CATG | 4 cut(s) | 100, 333, 385, 455 |
| FblI | GTMKAC | 1 cut(s) | 252 |
| FokI | GGATG | 1 cut(s) | 404 |
| FspBI | CTAG | 3 cut(s) | 69, 462, 519 |
| HaeIII | GGCC | 1 cut(s) | 293 |
| HapII | CCGG | 2 cut(s) | 42, 157 |
| Hin1II | CATG | 4 cut(s) | 104, 337, 389, 459 |
| HincII | GTYRAC | 1 cut(s) | 16 |
| HindII | GTYRAC | 1 cut(s) | 16 |
| HindIII | AAGCTT | 2 cut(s) | 164, 225 |
| HinfI | GANTC | 3 cut(s) | 38, 119, 570 |
| HpaII | CCGG | 2 cut(s) | 42, 157 |
| HphI | GGTGA | 1 cut(s) | 114 |
| Hpy166II | GTNNAC | 2 cut(s) | 16, 253 |
| Hpy188I | TCNGA | 7 cut(s) | 37, 94, 241, 412, 425, 438, 482 |
| Hpy188III | TCNNGA | 6 cut(s) | 42, 334, 350, 446, 542, 563 |
| Hpy8I | GTNNAC | 2 cut(s) | 16, 253 |
| HpyAV | CCTTC | 1 cut(s) | 133 |
| HpyCH4III | ACNGT | 1 cut(s) | 13 |
| HpyCH4V | TGCA | 5 cut(s) | 245, 385, 397, 476, 509 |
| HpyF3I | CTNAG | 4 cut(s) | 20, 188, 312, 479 |
| Hsp92II | CATG | 4 cut(s) | 104, 337, 389, 459 |
| Kpn2I | TCCGGA | 1 cut(s) | 41 |
| Kzo9I | GATC | 3 cut(s) | 26, 89, 276 |
| LpnPI | CCDG | 5 cut(s) | 55, 170, 379, 431, 576 |
| LweI | GCATC | 2 cut(s) | 232, 339 |
| MaeI | CTAG | 3 cut(s) | 69, 462, 519 |
| MalI | GATC | 3 cut(s) | 28, 91, 278 |
| MboI | GATC | 3 cut(s) | 26, 89, 276 |
| MboII | GAAGA | 3 cut(s) | 21, 99, 280 |
| MfeI | CAATTG | 1 cut(s) | 246 |
| MflI | RGATCY | 2 cut(s) | 26, 89 |
| MluCI | AATT | 5 cut(s) | 246, 263, 491, 498, 600 |
| MmeI | TCCRAC | 2 cut(s) | 267, 390 |
| MnlI | CCTC | 6 cut(s) | 77, 274, 283, 373, 574, 577 |
| MroI | TCCGGA | 1 cut(s) | 41 |
| MseI | TTAA | 3 cut(s) | 74, 168, 606 |
| MslI | CAYNNNNRTG | 3 cut(s) | 105, 374, 390 |
| MspI | CCGG | 2 cut(s) | 42, 157 |
| MspR9I | CCNGG | 1 cut(s) | 158 |
| MunI | CAATTG | 1 cut(s) | 246 |
| Mva1269I | GAATGC | 1 cut(s) | 478 |
| NciI | CCSGG | 1 cut(s) | 158 |
| NdeII | GATC | 3 cut(s) | 26, 89, 276 |
| NlaIII | CATG | 4 cut(s) | 104, 337, 389, 459 |
| NspI | RCATGY | 2 cut(s) | 104, 389 |
| NspV | TTCGAA | 1 cut(s) | 137 |
| PagI | TCATGA | 1 cut(s) | 333 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 502 |
| PctI | GAATGC | 1 cut(s) | 478 |
| PfeI | GAWTC | 3 cut(s) | 38, 119, 570 |
| Ple19I | CGATCG | 1 cut(s) | 279 |
| PshBI | ATTAAT | 1 cut(s) | 606 |
| PspPI | GGNCC | 2 cut(s) | 44, 192 |
| PsuI | RGATCY | 2 cut(s) | 26, 89 |
| PvuI | CGATCG | 1 cut(s) | 279 |
| RseI | CAYNNNNRTG | 3 cut(s) | 105, 374, 390 |
| SaqAI | TTAA | 3 cut(s) | 74, 168, 606 |
| Sau3AI | GATC | 3 cut(s) | 26, 89, 276 |
| Sau96I | GGNCC | 2 cut(s) | 44, 192 |
| ScrFI | CCNGG | 1 cut(s) | 158 |
| SetI | ASST | 9 cut(s) | 21, 49, 168, 194, 229, 313, 384, 489, 588 |
| SfaNI | GCATC | 2 cut(s) | 232, 339 |
| SfuI | TTCGAA | 1 cut(s) | 137 |
| SinI | GGWCC | 2 cut(s) | 44, 192 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 105, 374, 390 |
| Sse9I | AATT | 5 cut(s) | 246, 263, 491, 498, 600 |
| SsiI | CCGC | 1 cut(s) | 597 |
| SspI | AATATT | 1 cut(s) | 346 |
| SspMI | CTAG | 3 cut(s) | 69, 462, 519 |
| StyD4I | CCNGG | 1 cut(s) | 156 |
| TaaI | ACNGT | 1 cut(s) | 13 |
| TaqI | TCGA | 3 cut(s) | 137, 230, 279 |
| TasI | AATT | 5 cut(s) | 246, 263, 491, 498, 600 |
| TfiI | GAWTC | 3 cut(s) | 38, 119, 570 |
| Tru1I | TTAA | 3 cut(s) | 74, 168, 606 |
| Tru9I | TTAA | 3 cut(s) | 74, 168, 606 |
| TscAI | CASTG | 1 cut(s) | 376 |
| TspDTI | ATGAA | 4 cut(s) | 21, 66, 485, 491 |
| TspGWI | ACGGA | 1 cut(s) | 184 |
| TspRI | CASTG | 1 cut(s) | 376 |
| VpaK11BI | GGWCC | 2 cut(s) | 44, 192 |
| VspI | ATTAAT | 1 cut(s) | 606 |
| XapI | RAATTY | 1 cut(s) | 498 |
| XceI | RCATGY | 2 cut(s) | 104, 389 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 373 |
| XmiI | GTMKAC | 1 cut(s) | 252 |
| XspI | CTAG | 3 cut(s) | 69, 462, 519 |