MD03G1096500.v1.1
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000212
Physical Location & Seq
Reverse (-)
8302333 .. 8304423
2091 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1096500.v1.1.491

Sequence Viewer

Length: 1509 bp
ATGGAAGAACTTACATCCTTTTGTTGTTCACCCACTTCCTCACCCACATTTCAACGTCGTGTGCAGTTCATAGTTCAGAACAGGCCTGAATGCTGGCTCTATGCAATTTTCTGGCAAGCCTCCAAAGACAGCATCAGTGACCAAGTTGCGTTATCATGGGCTGGTGGCCATTTAAACAACCCTAGGGTTCGCGTGCCATCCAACAGAAGCAACAGAGTGATCACCAATAACTACCAACCCAAATTAGGGTTCAGCAATATGGAGAAAAAGAAGACGGCGATAATTAGCAAGAGAGATGAAGACGTGGTGGACTTGGACATGCGGCTGCTGGCCGACAATCATGACGGCACTGGCGATGCTACTCATGACTCCGACCGGTTTTACTTTTACGGCGTTTCGTTAACCCAATCTTTTGCTGCAGGCCAAGCGAGTAAAAATATTCTGGGACGTGCATTTTGTTCTGGTGGTTTTGTTTGGCTTGCAGGTGGCCATGAGCTTCAGTTGTACGAGTGTGAGAGAGTGAAGGAAGCAAGAATGCATGGGATTCAAACTTTGGTTTGTATTACTACTTCATGTGGGGTACTTGAACTGGCTTCTTTGGATGTAATCATGCAAGATTGGGGTCTCGTGCACCTATCAAAATCACTCTTTGGATCCGACCAGAAGAACAACAAATTTAAATTACTAGTTCCTGATCCCCTAGAAAAGATTGGATTTCTTTCAGGAGGTCAAAAAGAATTCACCATACAAGGTGGTGCAAATGAACCCATTATCCATACAGACGGGTCATCAACAGGCTCATCTTATGACTCTTTTGGCAATTTCACCCCTGCGAATACAGAGAACCCTCAATCAAAAAAGAGGGGAAGATCATCATCTTCAAACCATGGAGCTACAAGTAGAGAATCACAACTACTGAACCATGTTGAGGCAGAAAAACAAAGGAGGGATAAGCTCAACCATCGAATATGTCTCCTTCGTTCTATTGTTCCCAACGTGTCGGAAATGGACAGGTCCTCTTTGCTCGCTGATGCCGTGGCGTACATGAACCAGCTCAAAGGTAAGGTTGACGAACTGGAGGCCAAAATCCAAGCACAACCACCACAAAAACCCCTACTCACTAGCCAAAGCACCAGATCCATAACTGATGAACATCATCAATGTTCAAGTTGTAGTAATAATTATAGTAACAACAACAACCACAACAATAATAATGATAATTTAAATTTGAATAATAATAACGATAAGGTTAGAGGAACTAATGTTTTGGAAGTGGATGTGAAGATTGTGGGATCAAATCAAGCCATGATTCGAGTTCAGTGTCCGGATCAAGACTACCCTTATGCTAGATTGATGAATGCACTCAAAGGACTTGAGTTACAAGTTTACCATGCGAGCATATCAAGTGTCAAAAAGTCAATGATTCAAGATGTTGTGGTAGGACTGCCTTATGGCTTCACTAGCGAGGAGGCCTTGAGACTTGGTATTATAAAAAGATGGTACAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

503

Amino Acids

56.0

Weight (kDa)

7.95

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 18 - 217 3.8e-34 bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH PF00010 307 - 353 5.1e-08 Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant PF22754 424 - 480 5.2e-06 Plant bHLH transcription factor, ACT-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1490
AarI CACCTGC 1 cut(s) 473
Acc36I ACCTGC 1 cut(s) 473
AccII CGCG 1 cut(s) 192
AccIII TCCGGA 1 cut(s) 1324
AciI CCGC 1 cut(s) 322
AclWI GGATC 6 cut(s) 648, 661, 689, 1131, 1300, 1335
AcoI YGGCCR 3 cut(s) 166, 330, 487
AcsI RAATTY 3 cut(s) 674, 737, 1225
AcuI CTGAAG 1 cut(s) 482
AfaI GTAC 4 cut(s) 506, 582, 1043, 1502
AfiI CCNNNNNNNGG 3 cut(s) 245, 246, 928
AflIII ACRYGT 1 cut(s) 996
AgeI ACCGGT 1 cut(s) 375
AgsI TTSAA 7 cut(s) 53, 548, 587, 882, 1167, 1231, 1427
AhlI ACTAGT 1 cut(s) 685
AjiI CACGTC 2 cut(s) 304, 449
AjuI GAANNNNNNNTTGG 2 cut(s) 233, 265
AloI GAACNNNNNNTCC 2 cut(s) 756, 788
AluBI AGCT 4 cut(s) 496, 893, 955, 1054
AluI AGCT 4 cut(s) 496, 893, 955, 1054
Alw21I GWGCWC 1 cut(s) 633
Alw26I GTCTC 3 cut(s) 629, 977, 1471
Alw44I GTGCAC 1 cut(s) 629
AlwI GGATC 6 cut(s) 648, 661, 689, 1131, 1300, 1335
Aor13HI TCCGGA 1 cut(s) 1324
AoxI GGCC 7 cut(s) 83, 166, 330, 421, 487, 1080, 1470
ApaLI GTGCAC 1 cut(s) 629
ApeKI GCWGC 2 cut(s) 325, 416
ApoI RAATTY 3 cut(s) 674, 737, 1225
ArsI GACNNNNNNTTYG 2 cut(s) 438, 470
AsiGI ACCGGT 1 cut(s) 375
AspA2I CCTAGG 1 cut(s) 182
AspS9I GGNCC 1 cut(s) 1014
AsuHPI GGTGA 5 cut(s) 21, 33, 214, 733, 817
AvaII GGWCC 1 cut(s) 1014
AvrII CCTAGG 1 cut(s) 182
BaeGI GKGCMC 1 cut(s) 633
BalI TGGCCA 2 cut(s) 168, 489
BamHI GGATCC 1 cut(s) 653
BarI GAAGNNNNNNTAC 2 cut(s) 553, 585
BauI CACGAG 1 cut(s) 626
BbsI GAAGAC 2 cut(s) 278, 306
Bbv12I GWGCWC 1 cut(s) 633
BbvI GCAGC 2 cut(s) 312, 403
BccI CCATC 3 cut(s) 205, 969, 1491
BceAI ACGGC 4 cut(s) 291, 361, 406, 1019
BclI TGATCA 1 cut(s) 219
BcoDI GTCTC 3 cut(s) 629, 977, 1471
BcuI ACTAGT 1 cut(s) 685
BfaI CTAG 7 cut(s) 183, 686, 701, 1122, 1347, 1461, 1507
BfmI CTRYAG 1 cut(s) 417
BfuAI ACCTGC 1 cut(s) 473
BisI GCNGC 3 cut(s) 323, 326, 417
BlnI CCTAGG 1 cut(s) 182
BlsI GCNGC 3 cut(s) 324, 327, 418
Bme18I GGWCC 1 cut(s) 1014
BmgBI CACGTC 2 cut(s) 304, 449
BmgT120I GGNCC 1 cut(s) 1014
BmiI GGNNCC 1 cut(s) 655
BmsI GCATC 3 cut(s) 141, 346, 1021
BpiI GAAGAC 2 cut(s) 278, 306
BpmI CTGGAG 1 cut(s) 1097
BpuEI CTTGAG 2 cut(s) 1394, 1495
BsaBI GATNNNNATC 2 cut(s) 874, 1152
BsaI GGTCTC 1 cut(s) 629
BsaJI CCNNGG 3 cut(s) 182, 886, 1035
BsaWI WCCGGW 2 cut(s) 375, 1324
Bsc4I CCNNNNNNNGG 3 cut(s) 245, 246, 928
Bse118I RCCGGY 1 cut(s) 375
Bse1I ACTGG 3 cut(s) 355, 594, 1080
Bse8I GATNNNNATC 2 cut(s) 874, 1152
BseAI TCCGGA 1 cut(s) 1324
BseDI CCNNGG 3 cut(s) 182, 886, 1035
BseGI GGATG 4 cut(s) 14, 197, 607, 1282
BseJI GATNNNNATC 2 cut(s) 874, 1152
BseLI CCNNNNNNNGG 3 cut(s) 245, 246, 928
BseNI ACTGG 3 cut(s) 355, 594, 1080
BseRI GAGGAG 1 cut(s) 1481
BseSI GKGCMC 1 cut(s) 633
BseXI GCAGC 2 cut(s) 312, 403
BsgI GTGCAG 1 cut(s) 83
Bsh1236I CGCG 1 cut(s) 192
Bsh1285I CGRYCG 1 cut(s) 376
BshFI GGCC 7 cut(s) 85, 168, 332, 423, 489, 1082, 1472
BshTI ACCGGT 1 cut(s) 375
BsiEI CGRYCG 1 cut(s) 376
BsiHKAI GWGCWC 1 cut(s) 633
BsiSI CCGG 2 cut(s) 376, 1325
BslFI GGGAC 1 cut(s) 459
BslI CCNNNNNNNGG 3 cut(s) 245, 246, 928
BsmAI GTCTC 3 cut(s) 629, 977, 1471
BsmFI GGGAC 1 cut(s) 459
BsmI GAATGC 3 cut(s) 95, 540, 1363
BsnI GGCC 7 cut(s) 85, 168, 332, 423, 489, 1082, 1472
Bso31I GGTCTC 1 cut(s) 629
Bsp1286I GDGCHC 1 cut(s) 633
Bsp13I TCCGGA 1 cut(s) 1324
Bsp143I GATC 7 cut(s) 219, 653, 694, 869, 1136, 1292, 1327
Bsp19I CCATGG 1 cut(s) 886
BspACI CCGC 1 cut(s) 322
BspANI GGCC 7 cut(s) 85, 168, 332, 423, 489, 1082, 1472
BspEI TCCGGA 1 cut(s) 1324
BspFNI CGCG 1 cut(s) 192
BspHI TCATGA 2 cut(s) 340, 364
BspLI GGNNCC 1 cut(s) 655
BspMAI CTGCAG 1 cut(s) 421
BspMI ACCTGC 1 cut(s) 473
BspPI GGATC 6 cut(s) 648, 661, 689, 1131, 1300, 1335
BspTNI GGTCTC 1 cut(s) 629
BsrFI RCCGGY 1 cut(s) 375
BsrI ACTGG 3 cut(s) 355, 594, 1080
BssAI RCCGGY 1 cut(s) 375
BssECI CCNNGG 3 cut(s) 182, 886, 1035
BssMI GATC 7 cut(s) 219, 653, 694, 869, 1136, 1292, 1327
BssSI CACGAG 1 cut(s) 626
BssT1I CCWWGG 2 cut(s) 182, 886
Bst2BI CACGAG 1 cut(s) 626
BstC8I GCNNGC 8 cut(s) 95, 117, 194, 330, 421, 480, 1026, 1396
BstDSI CCRYGG 2 cut(s) 886, 1035
BstF5I GGATG 4 cut(s) 14, 197, 607, 1282
BstFNI CGCG 1 cut(s) 192
BstKTI GATC 7 cut(s) 222, 656, 697, 872, 1139, 1295, 1330
BstMAI GTCTC 3 cut(s) 629, 977, 1471
BstMBI GATC 7 cut(s) 219, 653, 694, 869, 1136, 1292, 1327
BstMCI CGRYCG 1 cut(s) 376
BstMWI GCNNNNNNNGC 2 cut(s) 425, 1461
BstNSI RCATGY 1 cut(s) 322
BstSFI CTRYAG 1 cut(s) 417
BstSLI GKGCMC 1 cut(s) 633
BstUI CGCG 1 cut(s) 192
BstV1I GCAGC 2 cut(s) 312, 403
BstV2I GAAGAC 2 cut(s) 278, 306
BstX2I RGATCY 2 cut(s) 653, 1136
BstYI RGATCY 2 cut(s) 653, 1136
BsuRI GGCC 7 cut(s) 85, 168, 332, 423, 489, 1082, 1472
BtgI CCRYGG 2 cut(s) 886, 1035
BtgZI GCGATG 1 cut(s) 369
BtrI CACGTC 2 cut(s) 304, 449
BtsCI GGATG 4 cut(s) 14, 197, 607, 1282
BtsIMutI CAGTG 3 cut(s) 142, 348, 1325
BveI ACCTGC 1 cut(s) 473
Cac8I GCNNGC 8 cut(s) 95, 117, 194, 330, 421, 480, 1026, 1396
CciI TCATGA 2 cut(s) 340, 364
Cfr10I RCCGGY 1 cut(s) 375
Cfr13I GGNCC 1 cut(s) 1014
Csp6I GTAC 4 cut(s) 505, 581, 1042, 1501
CspAI ACCGGT 1 cut(s) 375
CviQI GTAC 4 cut(s) 505, 581, 1042, 1501
DpnI GATC 7 cut(s) 221, 655, 696, 871, 1138, 1294, 1329
DpnII GATC 7 cut(s) 219, 653, 694, 869, 1136, 1292, 1327
DraI TTTAAA 3 cut(s) 174, 679, 1224
EaeI YGGCCR 3 cut(s) 166, 330, 487
Eco130I CCWWGG 2 cut(s) 182, 886
Eco147I AGGCCT 2 cut(s) 85, 1472
Eco31I GGTCTC 1 cut(s) 629
Eco47I GGWCC 1 cut(s) 1014
Eco57I CTGAAG 1 cut(s) 482
EcoO109I RGGNCCY 1 cut(s) 1014
EcoRI GAATTC 1 cut(s) 737
EcoT14I CCWWGG 2 cut(s) 182, 886
EcoT22I ATGCAT 1 cut(s) 540
ErhI CCWWGG 2 cut(s) 182, 886
FaqI GGGAC 1 cut(s) 459
FbaI TGATCA 1 cut(s) 219
Fnu4HI GCNGC 3 cut(s) 323, 326, 417
FokI GGATG 3 cut(s) 184, 614, 1289
Fsp4HI GCNGC 3 cut(s) 323, 326, 417
FspBI CTAG 7 cut(s) 183, 686, 701, 1122, 1347, 1461, 1507
GluI GCNGC 3 cut(s) 323, 326, 417
GsuI CTGGAG 1 cut(s) 1097
HaeIII GGCC 7 cut(s) 85, 168, 332, 423, 489, 1082, 1472
HapII CCGG 2 cut(s) 376, 1325
HincII GTYRAC 2 cut(s) 402, 1069
HindII GTYRAC 2 cut(s) 402, 1069
HinfI GANTC 6 cut(s) 368, 544, 809, 905, 1309, 1423
HpaI GTTAAC 1 cut(s) 402
HpaII CCGG 2 cut(s) 376, 1325
HphI GGTGA 5 cut(s) 21, 33, 214, 733, 817
Hpy166II GTNNAC 6 cut(s) 29, 310, 402, 631, 1069, 1387
Hpy188I TCNGA 4 cut(s) 78, 373, 658, 1003
Hpy188III TCNNGA 7 cut(s) 341, 365, 692, 723, 1325, 1331, 1427
Hpy8I GTNNAC 6 cut(s) 29, 310, 402, 631, 1069, 1387
Hpy99I CGWCG 1 cut(s) 60
HpyAV CCTTC 2 cut(s) 517, 986
HpyCH4IV ACGT 4 cut(s) 55, 303, 448, 996
HpyF10VI GCNNNNNNNGC 2 cut(s) 425, 1461
HpySE526I ACGT 4 cut(s) 55, 303, 448, 996
Kpn2I TCCGGA 1 cut(s) 1324
Ksp22I TGATCA 1 cut(s) 219
KspAI GTTAAC 1 cut(s) 402
Kzo9I GATC 7 cut(s) 219, 653, 694, 869, 1136, 1292, 1327
LmnI GCTCC 1 cut(s) 890
Lsp1109I GCAGC 2 cut(s) 312, 403
LweI GCATC 3 cut(s) 141, 346, 1021
MaeI CTAG 7 cut(s) 183, 686, 701, 1122, 1347, 1461, 1507
MaeII ACGT 4 cut(s) 55, 303, 448, 996
MaeIII GTNAC 3 cut(s) 137, 1187, 1377
MalI GATC 7 cut(s) 221, 655, 696, 871, 1138, 1294, 1329
MboI GATC 7 cut(s) 219, 653, 694, 869, 1136, 1292, 1327
MboII GAAGA 7 cut(s) 17, 283, 311, 676, 870, 879, 1294
MflI RGATCY 2 cut(s) 653, 1136
MhlI GDGCHC 1 cut(s) 633
MlsI TGGCCA 2 cut(s) 168, 489
MluNI TGGCCA 2 cut(s) 168, 489
MlyI GAGTC 2 cut(s) 362, 803
MmeI TCCRAC 4 cut(s) 225, 396, 681, 981
Mox20I TGGCCA 2 cut(s) 168, 489
Mph1103I ATGCAT 1 cut(s) 540
MroI TCCGGA 1 cut(s) 1324
MscI TGGCCA 2 cut(s) 168, 489
MseI TTAA 4 cut(s) 173, 401, 678, 1223
Msp20I TGGCCA 2 cut(s) 168, 489
MspI CCGG 2 cut(s) 376, 1325
Mva1269I GAATGC 3 cut(s) 95, 540, 1363
MvnI CGCG 1 cut(s) 192
MwoI GCNNNNNNNGC 2 cut(s) 425, 1461
NcoI CCATGG 1 cut(s) 886
NdeII GATC 7 cut(s) 219, 653, 694, 869, 1136, 1292, 1327
NlaIV GGNNCC 1 cut(s) 655
NmuCI GTSAC 1 cut(s) 137
NsiI ATGCAT 1 cut(s) 540
NspI RCATGY 1 cut(s) 322
PagI TCATGA 2 cut(s) 340, 364
PaqCI CACCTGC 1 cut(s) 473
PceI AGGCCT 2 cut(s) 85, 1472
PcsI WCGNNNNNNNCGW 2 cut(s) 351, 1032
PctI GAATGC 3 cut(s) 95, 540, 1363
PfeI GAWTC 4 cut(s) 544, 905, 1309, 1423
PinAI ACCGGT 1 cut(s) 375
PkrI GCNGC 3 cut(s) 324, 327, 418
PleI GAGTC 2 cut(s) 362, 803
PpsI GAGTC 2 cut(s) 362, 803
PpuMI RGGWCCY 1 cut(s) 1014
PsiI TTATAA 1 cut(s) 1490
Psp5II RGGWCCY 1 cut(s) 1014
PspN4I GGNNCC 1 cut(s) 655
PspPI GGNCC 1 cut(s) 1014
PspPPI RGGWCCY 1 cut(s) 1014
PstI CTGCAG 1 cut(s) 421
PsuI RGATCY 2 cut(s) 653, 1136
RsaI GTAC 4 cut(s) 506, 582, 1043, 1502
RsaNI GTAC 4 cut(s) 505, 581, 1042, 1501
SaqAI TTAA 4 cut(s) 173, 401, 678, 1223
SatI GCNGC 3 cut(s) 323, 326, 417
Sau3AI GATC 7 cut(s) 219, 653, 694, 869, 1136, 1292, 1327
Sau96I GGNCC 1 cut(s) 1014
SchI GAGTC 2 cut(s) 362, 803
SduI GDGCHC 1 cut(s) 633
SfaNI GCATC 3 cut(s) 141, 346, 1021
SfcI CTRYAG 1 cut(s) 417
SinI GGWCC 1 cut(s) 1014
SmiI ATTTAAAT 2 cut(s) 679, 1224
SmlI CTYRAG 2 cut(s) 1373, 1474
SmoI CTYRAG 2 cut(s) 1373, 1474
SpeI ACTAGT 1 cut(s) 685
SseBI AGGCCT 2 cut(s) 85, 1472
SsiI CCGC 1 cut(s) 322
SspI AATATT 1 cut(s) 439
SspMI CTAG 7 cut(s) 183, 686, 701, 1122, 1347, 1461, 1507
StuI AGGCCT 2 cut(s) 85, 1472
StyI CCWWGG 2 cut(s) 182, 886
SwaI ATTTAAAT 2 cut(s) 679, 1224
TaiI ACGT 4 cut(s) 58, 306, 451, 999
TaqI TCGA 2 cut(s) 964, 1312
TauI GCSGC 1 cut(s) 325
TfiI GAWTC 4 cut(s) 544, 905, 1309, 1423
Tru1I TTAA 4 cut(s) 173, 401, 678, 1223
Tru9I TTAA 4 cut(s) 173, 401, 678, 1223
TscAI CASTG 3 cut(s) 142, 355, 1325
TseFI GTSAC 1 cut(s) 137
TseI GCWGC 2 cut(s) 325, 416
Tsp45I GTSAC 1 cut(s) 137
TspDTI ATGAA 7 cut(s) 58, 312, 561, 777, 1061, 1164, 1370
TspRI CASTG 3 cut(s) 142, 355, 1325
VneI GTGCAC 1 cut(s) 629
VpaK11BI GGWCC 1 cut(s) 1014
XapI RAATTY 3 cut(s) 674, 737, 1225
XceI RCATGY 1 cut(s) 322
XmaJI CCTAGG 1 cut(s) 182
XspI CTAG 7 cut(s) 183, 686, 701, 1122, 1347, 1461, 1507
Zsp2I ATGCAT 1 cut(s) 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.