MD11G1145000.v1.1
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000212
Physical Location & Seq
Reverse (-)
13460305 .. 13462249
1945 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1145000.v1.1.491

Sequence Viewer

Length: 1446 bp
ATGGAAGAGATTATATCCTCTTCTTCTTCACCCAGTTTCTGTCAAGACCACACCCTCTCCACATTTCAACAACGTCTCCAATTCATAATTCAGAACAGGCCTGAATGCTGGGTCTATTCAATTTTCTGGCAAGCCTCCAAAGACAGCACTACCGACCAAGTTGCTTTATCGTGGGCTGGTGGCCATTTCTCAAACCCTAAGGATCACGCGGCATCCGACAGCAGAAGTAACGGACCGATCAATAGTTACCAGCCCAAATTTGGGTACAACAAGAAGGTGGTAGTTAACAGAGAGGTTGAGTTGGGGTTTTTTCATGATGTTGAAGACATGCTGGTGGATAATAATCATGGATATGATGTCACTGACTCTGATCGGTTTTACTTTTACAGTGTTTCTTTTACCCAATCATTTTCTGCAGGCCATGCGAGTAATAATATTCTGGGGCGTGCATTTTGTTCTGGTGGCTTTGTTTGGCTTGCAGGTGATAATGAGCTTCAGTTCTATCAGTGTGAGAGAGTGAAAGAAGCAAGAATGCATGGGATTCAAACTTTAGTTTGTATTGCTACTTCATGTGGGGTAATTGAACTGGCTTCTCTGGATGTGATCACGCAAGATTGGGATCTTGTGCACCTATCAAAATCACTCTTTGGATCCGACCACAACAACAACAAATTGAAATTGCTTGTTCCTGATCCCCTAGAAAAGATTGGATTGATTTCAGGAGGTCAAAAAGAATTCACCAGACACGACGGGTCATCATCAGGCTCACCTTATGAATCTTTTGGCAATTTCACCCCTGCGACTACAGAGAACCCTCGATCAAAAAAGAGAGGACGATCATCATCATCAAACCATGCAGCTACAAGTAGAGAATCACAACTGCTGAACCATGTTGAGGCAGAGAAACAAAGGAGGGATAAGCTCAACCAGCGATTCTGTCTCCTCCGTTCGGTTGTTCCCAATGTGTCAAAAATGGACAGATCCTCTTTGCTCGCTGATGCCGTGGCATACATCAACCAGCTCAAAGGTAAGGTTGACGAATTGGAGGCCAAAATCTATGCACAACCAACCCAAAAAACCCTACTGGCTAGCAGCCAAAGCACCAGCTCCATAACCGATCAAAATCATCAATGTTCAACTAATAATAATAATAATAATACTTTGAAGAATAATAATAATGATAATGTTAGAGGAGCTGGTGTTTTGGAACTGGATGTGAAGATTGTGAGATCAAATCAAGCCATGATTCGAGTTCAGTGTCCGGATCAAGACTACCCTTATGCTAGATTGATGAATGCACTCAAGGGACTTGGGTTACAAGTTTACCATGCAAGCATATCAAGTGTCAAAGAGTGTATGATTCAAGATGTTGTGGCAAGACTGCCTTATGGCTTCACTAGTGAGGAGGCCTTGAGACTTGGTATTATAAAAAGATGGTACAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

482

Amino Acids

53.84

Weight (kDa)

6.92

Isoelectric Point (pI)

47.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 23 - 216 3e-38 bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH PF00010 296 - 342 9.3e-11 Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant PF22754 403 - 459 1.8e-06 Plant bHLH transcription factor, ACT-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1427
AarI CACCTGC 1 cut(s) 470
Acc36I ACCTGC 1 cut(s) 470
AccII CGCG 1 cut(s) 209
AccIII TCCGGA 1 cut(s) 1261
AciI CCGC 1 cut(s) 209
AclWI GGATC 7 cut(s) 210, 627, 645, 658, 686, 975, 1272
AcoI YGGCCR 1 cut(s) 181
AcsI RAATTY 2 cut(s) 257, 734
AcuI CTGAAG 1 cut(s) 479
AfaI GTAC 2 cut(s) 266, 1439
AfiI CCNNNNNNNGG 4 cut(s) 260, 261, 895, 949
AgsI TTSAA 9 cut(s) 68, 120, 323, 545, 584, 676, 1137, 1165, 1364
AhlI ACTAGT 1 cut(s) 1397
AjuI GAANNNNNNNTTGG 2 cut(s) 72, 104
AluBI AGCT 6 cut(s) 493, 860, 922, 1021, 1107, 1196
AluI AGCT 6 cut(s) 493, 860, 922, 1021, 1107, 1196
Alw21I GWGCWC 1 cut(s) 630
Alw26I GTCTC 3 cut(s) 80, 944, 1408
Alw44I GTGCAC 1 cut(s) 626
AlwI GGATC 7 cut(s) 210, 627, 645, 658, 686, 975, 1272
AlwNI CAGNNNCTG 1 cut(s) 39
Aor13HI TCCGGA 1 cut(s) 1261
AoxI GGCC 5 cut(s) 98, 181, 418, 1047, 1407
ApaLI GTGCAC 1 cut(s) 626
ApeKI GCWGC 2 cut(s) 857, 1092
ApoI RAATTY 2 cut(s) 257, 734
AspS9I GGNCC 1 cut(s) 233
AsuHPI GGTGA 5 cut(s) 21, 494, 730, 759, 784
AsuNHI GCTAGC 1 cut(s) 1088
AvaII GGWCC 1 cut(s) 233
AxyI CCTNAGG 1 cut(s) 198
BaeGI GKGCMC 1 cut(s) 630
BalI TGGCCA 1 cut(s) 183
BamHI GGATCC 1 cut(s) 650
BarI GAAGNNNNNNTAC 2 cut(s) 550, 582
BbsI GAAGAC 1 cut(s) 330
Bbv12I GWGCWC 1 cut(s) 630
BbvI GCAGC 2 cut(s) 869, 1104
BccI CCATC 1 cut(s) 1428
BceAI ACGGC 1 cut(s) 986
BcgI CGANNNNNNTGC 2 cut(s) 143, 177
BclI TGATCA 1 cut(s) 603
BcoDI GTCTC 3 cut(s) 80, 944, 1408
BcuI ACTAGT 1 cut(s) 1397
BfaI CTAG 5 cut(s) 698, 1089, 1284, 1398, 1444
BfmI CTRYAG 2 cut(s) 414, 804
BfuAI ACCTGC 1 cut(s) 470
BisI GCNGC 3 cut(s) 210, 858, 1093
BlsI GCNGC 3 cut(s) 211, 859, 1094
Bme18I GGWCC 1 cut(s) 233
BmgT120I GGNCC 1 cut(s) 233
BmiI GGNNCC 1 cut(s) 652
BmrI ACTGGG 1 cut(s) 27
BmsI GCATC 2 cut(s) 221, 988
BmtI GCTAGC 1 cut(s) 1092
BmuI ACTGGG 1 cut(s) 27
BpiI GAAGAC 1 cut(s) 330
BpuEI CTTGAG 2 cut(s) 1286, 1432
BsaBI GATNNNNATC 4 cut(s) 342, 618, 841, 1122
BsaJI CCNNGG 1 cut(s) 1002
BsaWI WCCGGW 1 cut(s) 1261
BsaXI ACNNNNNCTCC 6 cut(s) 41, 60, 71, 90, 1185, 1215
Bsc4I CCNNNNNNNGG 4 cut(s) 260, 261, 895, 949
Bse1I ACTGG 4 cut(s) 33, 591, 1089, 1215
Bse21I CCTNAGG 1 cut(s) 198
Bse8I GATNNNNATC 4 cut(s) 342, 618, 841, 1122
BseAI TCCGGA 1 cut(s) 1261
BseDI CCNNGG 1 cut(s) 1002
BseGI GGATG 3 cut(s) 212, 604, 1219
BseJI GATNNNNATC 4 cut(s) 342, 618, 841, 1122
BseLI CCNNNNNNNGG 4 cut(s) 260, 261, 895, 949
BseNI ACTGG 4 cut(s) 33, 591, 1089, 1215
BseRI GAGGAG 3 cut(s) 932, 1206, 1418
BseSI GKGCMC 1 cut(s) 630
BseXI GCAGC 2 cut(s) 869, 1104
BseYI CCCAGC 1 cut(s) 108
Bsh1236I CGCG 1 cut(s) 209
BshFI GGCC 5 cut(s) 100, 183, 420, 1049, 1409
BsiHKAI GWGCWC 1 cut(s) 630
BsiSI CCGG 1 cut(s) 1262
BslFI GGGAC 1 cut(s) 1320
BslI CCNNNNNNNGG 4 cut(s) 260, 261, 895, 949
BsmAI GTCTC 3 cut(s) 80, 944, 1408
BsmBI CGTCTC 1 cut(s) 80
BsmFI GGGAC 1 cut(s) 1320
BsmI GAATGC 3 cut(s) 110, 537, 1300
BsnI GGCC 5 cut(s) 100, 183, 420, 1049, 1409
Bsp1286I GDGCHC 1 cut(s) 630
Bsp13I TCCGGA 1 cut(s) 1261
BspACI CCGC 1 cut(s) 209
BspANI GGCC 5 cut(s) 100, 183, 420, 1049, 1409
BspEI TCCGGA 1 cut(s) 1261
BspFNI CGCG 1 cut(s) 209
BspHI TCATGA 1 cut(s) 313
BspLI GGNNCC 1 cut(s) 652
BspMAI CTGCAG 1 cut(s) 418
BspMI ACCTGC 1 cut(s) 470
BspOI GCTAGC 1 cut(s) 1092
BspPI GGATC 7 cut(s) 210, 627, 645, 658, 686, 975, 1272
BsrI ACTGG 4 cut(s) 33, 591, 1089, 1215
BssECI CCNNGG 1 cut(s) 1002
Bst4CI ACNGT 1 cut(s) 389
Bst6I CTCTTC 1 cut(s) 25
BstAPI GCANNNNNTGC 1 cut(s) 422
BstC8I GCNNGC 7 cut(s) 132, 418, 447, 477, 993, 1090, 1333
BstDEI CTNAG 1 cut(s) 198
BstDSI CCRYGG 1 cut(s) 1002
BstF5I GGATG 3 cut(s) 212, 604, 1219
BstFNI CGCG 1 cut(s) 209
BstMAI GTCTC 3 cut(s) 80, 944, 1408
BstMWI GCNNNNNNNGC 3 cut(s) 422, 928, 1098
BstNSI RCATGY 1 cut(s) 331
BstSFI CTRYAG 2 cut(s) 414, 804
BstSLI GKGCMC 1 cut(s) 630
BstUI CGCG 1 cut(s) 209
BstV1I GCAGC 2 cut(s) 869, 1104
BstV2I GAAGAC 1 cut(s) 330
BstX2I RGATCY 3 cut(s) 619, 650, 980
BstYI RGATCY 3 cut(s) 619, 650, 980
Bsu36I CCTNAGG 1 cut(s) 198
BsuRI GGCC 5 cut(s) 100, 183, 420, 1049, 1409
BtgI CCRYGG 1 cut(s) 1002
BtsCI GGATG 3 cut(s) 212, 604, 1219
BtsIMutI CAGTG 4 cut(s) 360, 394, 512, 1262
BveI ACCTGC 1 cut(s) 470
Cac8I GCNNGC 7 cut(s) 132, 418, 447, 477, 993, 1090, 1333
CaiI CAGNNNCTG 1 cut(s) 39
CciI TCATGA 1 cut(s) 313
Cfr13I GGNCC 1 cut(s) 233
CpoI CGGWCCG 1 cut(s) 233
Csp6I GTAC 2 cut(s) 265, 1438
CspI CGGWCCG 1 cut(s) 233
CviQI GTAC 2 cut(s) 265, 1438
DdeI CTNAG 1 cut(s) 198
EaeI YGGCCR 1 cut(s) 181
Eam1104I CTCTTC 1 cut(s) 25
EarI CTCTTC 1 cut(s) 25
Eco147I AGGCCT 2 cut(s) 100, 1409
Eco47I GGWCC 1 cut(s) 233
Eco57I CTGAAG 1 cut(s) 479
Eco81I CCTNAGG 1 cut(s) 198
EcoRI GAATTC 1 cut(s) 734
EcoT22I ATGCAT 1 cut(s) 537
Esp3I CGTCTC 1 cut(s) 80
FalI AAGNNNNNCTT 2 cut(s) 1369, 1401
FaqI GGGAC 1 cut(s) 1320
FbaI TGATCA 1 cut(s) 603
Fnu4HI GCNGC 3 cut(s) 210, 858, 1093
FokI GGATG 3 cut(s) 199, 611, 1226
Fsp4HI GCNGC 3 cut(s) 210, 858, 1093
FspBI CTAG 5 cut(s) 698, 1089, 1284, 1398, 1444
GluI GCNGC 3 cut(s) 210, 858, 1093
GsaI CCCAGC 1 cut(s) 112
HaeIII GGCC 5 cut(s) 100, 183, 420, 1049, 1409
HapII CCGG 1 cut(s) 1262
HincII GTYRAC 2 cut(s) 286, 1036
HindII GTYRAC 2 cut(s) 286, 1036
HinfI GANTC 7 cut(s) 365, 541, 776, 872, 933, 1246, 1360
HpaI GTTAAC 1 cut(s) 286
HpaII CCGG 1 cut(s) 1262
HphI GGTGA 5 cut(s) 21, 494, 730, 759, 784
Hpy166II GTNNAC 4 cut(s) 286, 628, 1036, 1324
Hpy188I TCNGA 4 cut(s) 93, 217, 370, 655
Hpy188III TCNNGA 8 cut(s) 44, 314, 596, 689, 720, 1262, 1268, 1364
Hpy8I GTNNAC 4 cut(s) 286, 628, 1036, 1324
Hpy99I CGWCG 1 cut(s) 752
HpyAV CCTTC 1 cut(s) 268
HpyCH4III ACNGT 1 cut(s) 389
HpyCH4IV ACGT 1 cut(s) 73
HpyCH4V TGCA 9 cut(s) 416, 449, 479, 535, 628, 857, 1061, 1298, 1331
HpyF10VI GCNNNNNNNGC 3 cut(s) 422, 928, 1098
HpyF3I CTNAG 1 cut(s) 198
HpySE526I ACGT 1 cut(s) 73
Kpn2I TCCGGA 1 cut(s) 1261
Ksp22I TGATCA 1 cut(s) 603
KspAI GTTAAC 1 cut(s) 286
LmnI GCTCC 2 cut(s) 1112, 1193
Lsp1109I GCAGC 2 cut(s) 869, 1104
LweI GCATC 2 cut(s) 221, 988
MaeI CTAG 5 cut(s) 698, 1089, 1284, 1398, 1444
MaeII ACGT 1 cut(s) 73
MaeIII GTNAC 4 cut(s) 227, 245, 358, 1314
MboII GAAGA 7 cut(s) 12, 15, 17, 18, 335, 1177, 1231
MflI RGATCY 3 cut(s) 619, 650, 980
MhlI GDGCHC 1 cut(s) 630
MlsI TGGCCA 1 cut(s) 183
MluNI TGGCCA 1 cut(s) 183
MlyI GAGTC 1 cut(s) 359
MmeI TCCRAC 2 cut(s) 240, 678
Mox20I TGGCCA 1 cut(s) 183
Mph1103I ATGCAT 1 cut(s) 537
MroI TCCGGA 1 cut(s) 1261
MscI TGGCCA 1 cut(s) 183
MseI TTAA 1 cut(s) 285
MslI CAYNNNNRTG 2 cut(s) 332, 351
Msp20I TGGCCA 1 cut(s) 183
MspI CCGG 1 cut(s) 1262
Mva1269I GAATGC 3 cut(s) 110, 537, 1300
MvnI CGCG 1 cut(s) 209
MwoI GCNNNNNNNGC 3 cut(s) 422, 928, 1098
NheI GCTAGC 1 cut(s) 1088
NlaIV GGNNCC 1 cut(s) 652
NmuCI GTSAC 1 cut(s) 358
NsiI ATGCAT 1 cut(s) 537
NspI RCATGY 1 cut(s) 331
PagI TCATGA 1 cut(s) 313
PaqCI CACCTGC 1 cut(s) 470
PceI AGGCCT 2 cut(s) 100, 1409
PcsI WCGNNNNNNNCGW 2 cut(s) 213, 999
PctI GAATGC 3 cut(s) 110, 537, 1300
PfeI GAWTC 6 cut(s) 541, 776, 872, 933, 1246, 1360
PkrI GCNGC 3 cut(s) 211, 859, 1094
PleI GAGTC 1 cut(s) 359
PpsI GAGTC 1 cut(s) 359
PsiI TTATAA 1 cut(s) 1427
PspFI CCCAGC 1 cut(s) 108
PspN4I GGNNCC 1 cut(s) 652
PspPI GGNCC 1 cut(s) 233
PstI CTGCAG 1 cut(s) 418
PstNI CAGNNNCTG 1 cut(s) 39
PsuI RGATCY 3 cut(s) 619, 650, 980
RsaI GTAC 2 cut(s) 266, 1439
RsaNI GTAC 2 cut(s) 265, 1438
RseI CAYNNNNRTG 2 cut(s) 332, 351
Rsr2I CGGWCCG 1 cut(s) 233
RsrII CGGWCCG 1 cut(s) 233
SaqAI TTAA 1 cut(s) 285
SatI GCNGC 3 cut(s) 210, 858, 1093
Sau96I GGNCC 1 cut(s) 233
SchI GAGTC 1 cut(s) 359
SduI GDGCHC 1 cut(s) 630
SfaNI GCATC 2 cut(s) 221, 988
SfcI CTRYAG 2 cut(s) 414, 804
SinI GGWCC 1 cut(s) 233
SmiMI CAYNNNNRTG 2 cut(s) 332, 351
SmlI CTYRAG 2 cut(s) 1301, 1411
SmoI CTYRAG 2 cut(s) 1301, 1411
SpeI ACTAGT 1 cut(s) 1397
SseBI AGGCCT 2 cut(s) 100, 1409
SsiI CCGC 1 cut(s) 209
SspI AATATT 1 cut(s) 436
SspMI CTAG 5 cut(s) 698, 1089, 1284, 1398, 1444
StuI AGGCCT 2 cut(s) 100, 1409
TaaI ACNGT 1 cut(s) 389
TaiI ACGT 1 cut(s) 76
TaqI TCGA 2 cut(s) 817, 1249
TaqII GACCGA 1 cut(s) 250
TauI GCSGC 1 cut(s) 212
TfiI GAWTC 6 cut(s) 541, 776, 872, 933, 1246, 1360
Tru1I TTAA 1 cut(s) 285
Tru9I TTAA 1 cut(s) 285
TscAI CASTG 4 cut(s) 367, 394, 512, 1262
TseFI GTSAC 1 cut(s) 358
TseI GCWGC 2 cut(s) 857, 1092
Tsp45I GTSAC 1 cut(s) 358
TspDTI ATGAA 5 cut(s) 73, 302, 558, 789, 1307
TspGWI ACGGA 2 cut(s) 246, 935
TspRI CASTG 4 cut(s) 367, 394, 512, 1262
VneI GTGCAC 1 cut(s) 626
VpaK11BI GGWCC 1 cut(s) 233
XapI RAATTY 2 cut(s) 257, 734
XceI RCATGY 1 cut(s) 331
XcmI CCANNNNNNNNNTGG 1 cut(s) 257
XspI CTAG 5 cut(s) 698, 1089, 1284, 1398, 1444
Zsp2I ATGCAT 1 cut(s) 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.