Prupe.5G130700_v2.0.a1
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000212
Physical Location & Seq
Forward (+)
12631561 .. 12633739
2179 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G130700.1

Sequence Viewer

Length: 1479 bp
ATGGAAGAAATTATGTCCTCTTGTTCTCCAAACTTTGGTCAAGAAAACTCAGCCACTCTTCAACAACGTCTCCAGTTCATCGTCCAGAACAGGCCTGAATGGTGGGTTTACTCAATCTTCTGGCAAGCCTCTAAAGACAGCAATGGCCAAGTTGCTTTGTCCTGGGCTGGTGGCCATTTCCGAAGCTCCAGGGACTTGGCATCCAAAAGAAGCAACAAATTAGTCCATAATTACCAACCCAAATCCGGGTTCATCAGTACGGAGAGAAAGAAGGTTGTTAACAGAGAAGTTGAAGCTCTTTTCAATGAAGATATGGATTTGGACGGTGGAGATGTCACTGACTCCGAGTGGTTCTACTTTTACACAGTTTCTTTAACCCAGTCGTTTGGTGCATGCCATGGGACTGGGAATATCCTGGGCCGTGCGTTTTGTTCTGGCGGTTTTGTTTGGCTGGCAGGTGACCATGAGCTTCAATTCTATGAGTGTGAGAGAGTGAAAGAAGCTCGAATGCATGGAATTCAAACTTTGGTTTGTATTCAAACTTCATGTGGAGTTCTTGAGCTGGCTTCTCTGGATGTGATCAAAGAAGATTGGGGCCTTGTGGAGCTTTCCAAATCTCTTTTTGGATCAGAAAACAGCAGAGTCTCAAAGCCACAGAGCAGTCGTGAGGGTCATGTACTTGTTCCTCTGCTTGAAAGTGGAATGTTTTCAGCTGGACCTCAAAAAGAGTGGACCGCACAAGGTGGTACAAAGGAACGTTTTGCTTTGAATATTGGTGGATCATCGTCAGACTCAGGGCCTTCTGACTCAGTCGGAAATTTCACGACGGAGAATGCGGAGAATAACGGTCGATTAAAAAAGAGAGGAAGATCATCCAACCATGGAACTGATAGAGAATCACCAATAAATCATGTTGAGGCAGAGAGACAGCGGAGAGAGAAGCTTAACCATCGATTCTATGCCCTCCGCTCTGTGGTTCCAAATGTGTCGAAAATGGACAAAGCTTCTTTACTTTCTGATGCAGTTGTGTACATCAATAAGCTCAAAGCAAAGGTTGAGGAATTGGAGGCTAAAATCCAACAACCACCCCAGAAACCGAAATTAGGTATTTTGAGTAATCTTGAGCATCAATCAAACCAAAGTGCCAGTTCCATAGTCGATCATCATCGTCACCATCATCATCATCAAGCAAGGCCTAGACCAGCATCAAGTTATACTAATAGTGAAGTAGCTGGGGCAATAGAAGTGGATGTGAAGATTGTGGGCTCAGAAGCTATGATACGAGTTCAGAGTCCGGATCAGAATTACCCATACGCTAGATTGATGAATGCACTAAAAGACCTTGAATTACAAGTTTATCATGCAAGCATATCAAGCGTGAAAGAAATGATGCTTCAAGATGTTGTGGCTAGAGTTCCTCATGGATTCACAAGTGAGGAGGCCATGAGAACCGCTATTATAAAAAGATGGTACAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

493

Amino Acids

55.17

Weight (kDa)

7.04

Isoelectric Point (pI)

53.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1460
AarI CACCTGC 1 cut(s) 446
Acc36I ACCTGC 1 cut(s) 446
AccB7I CCANNNNNTGG 1 cut(s) 35
AccBSI CCGCTC 1 cut(s) 969
AccIII TCCGGA 1 cut(s) 1294
AciI CCGC 6 cut(s) 438, 735, 836, 931, 967, 1452
AclI AACGTT 1 cut(s) 757
AclWI GGATC 3 cut(s) 634, 787, 1305
AcoI YGGCCR 2 cut(s) 145, 172
AcsI RAATTY 2 cut(s) 516, 817
AdeI CACNNNGTG 1 cut(s) 743
AfaI GTAC 5 cut(s) 259, 678, 748, 1031, 1472
AfiI CCNNNNNNNGG 5 cut(s) 35, 245, 246, 973, 1103
AjnI CCWGG 3 cut(s) 161, 188, 414
AjuI GAANNNNNNNTTGG 2 cut(s) 233, 265
Alw26I GTCTC 3 cut(s) 74, 649, 919
AlwI GGATC 3 cut(s) 634, 787, 1305
Aor13HI TCCGGA 1 cut(s) 1294
AoxI GGCC 8 cut(s) 92, 145, 172, 418, 595, 797, 1193, 1440
ApoI RAATTY 2 cut(s) 516, 817
Asp700I GAANNNNTTC 1 cut(s) 706
AspS9I GGNCC 5 cut(s) 418, 595, 716, 732, 797
AsuC2I CCSGG 1 cut(s) 247
AsuHPI GGTGA 3 cut(s) 470, 891, 1163
AvaII GGWCC 2 cut(s) 716, 732
BalI TGGCCA 2 cut(s) 147, 174
BanII GRGCYC 1 cut(s) 1268
BarI GAAGNNNNNNTAC 4 cut(s) 526, 558, 1263, 1295
BccI CCATC 3 cut(s) 957, 1182, 1461
BceAI ACGGC 1 cut(s) 405
BciT130I CCWGG 3 cut(s) 163, 190, 416
BclI TGATCA 1 cut(s) 579
BcnI CCSGG 1 cut(s) 247
BcoDI GTCTC 3 cut(s) 74, 649, 919
BfaI CTAG 4 cut(s) 1197, 1317, 1410, 1477
BfuAI ACCTGC 1 cut(s) 446
Bme1390I CCNGG 4 cut(s) 163, 190, 247, 416
Bme18I GGWCC 2 cut(s) 716, 732
BmgT120I GGNCC 5 cut(s) 418, 595, 716, 732, 797
BmiI GGNNCC 2 cut(s) 596, 978
BmrFI CCNGG 4 cut(s) 163, 190, 247, 416
BmrI ACTGGG 2 cut(s) 373, 414
BmsI GCATC 5 cut(s) 209, 1009, 1135, 1214, 1380
BmuI ACTGGG 2 cut(s) 373, 414
BpmI CTGGAG 2 cut(s) 56, 172
BpuEI CTTGAG 2 cut(s) 578, 1142
BpuMI CCSGG 1 cut(s) 247
Bsa29I ATCGAT 1 cut(s) 952
BsaBI GATNNNNATC 1 cut(s) 1164
BsaJI CCNNGG 5 cut(s) 162, 189, 397, 415, 880
BsaWI WCCGGW 1 cut(s) 1294
BsaXI ACNNNNNCTCC 2 cut(s) 54, 84
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 245, 246, 973, 1103
Bse1I ACTGG 4 cut(s) 73, 379, 409, 1146
Bse3DI GCAATG 1 cut(s) 148
Bse8I GATNNNNATC 1 cut(s) 1164
BseAI TCCGGA 1 cut(s) 1294
BseBI CCWGG 3 cut(s) 163, 190, 416
BseCI ATCGAT 1 cut(s) 952
BseDI CCNNGG 5 cut(s) 162, 189, 397, 415, 880
BseGI GGATG 4 cut(s) 200, 580, 872, 1255
BseJI GATNNNNATC 1 cut(s) 1164
BseLI CCNNNNNNNGG 5 cut(s) 35, 245, 246, 973, 1103
BseMI GCAATG 1 cut(s) 148
BseMII CTCAG 4 cut(s) 63, 807, 822, 1281
BseNI ACTGG 4 cut(s) 73, 379, 409, 1146
BseRI GAGGAG 1 cut(s) 1451
BseYI CCCAGC 1 cut(s) 1232
Bsh1285I CGRYCG 1 cut(s) 850
BshFI GGCC 8 cut(s) 94, 147, 174, 420, 597, 799, 1195, 1442
BshVI ATCGAT 1 cut(s) 952
BsiEI CGRYCG 1 cut(s) 850
BsiSI CCGG 2 cut(s) 246, 1295
BslFI GGGAC 2 cut(s) 206, 415
BslI CCNNNNNNNGG 5 cut(s) 35, 245, 246, 973, 1103
BsmAI GTCTC 3 cut(s) 74, 649, 919
BsmBI CGTCTC 1 cut(s) 74
BsmFI GGGAC 2 cut(s) 206, 415
BsmI GAATGC 3 cut(s) 513, 838, 1333
BsnI GGCC 8 cut(s) 94, 147, 174, 420, 597, 799, 1195, 1442
Bsp1286I GDGCHC 1 cut(s) 1268
Bsp13I TCCGGA 1 cut(s) 1294
Bsp1407I TGTACA 1 cut(s) 1029
Bsp143I GATC 6 cut(s) 579, 626, 779, 869, 1159, 1297
Bsp19I CCATGG 2 cut(s) 397, 880
BspACI CCGC 6 cut(s) 438, 735, 836, 931, 967, 1452
BspANI GGCC 8 cut(s) 94, 147, 174, 420, 597, 799, 1195, 1442
BspCNI CTCAG 4 cut(s) 62, 806, 821, 1280
BspDI ATCGAT 1 cut(s) 952
BspEI TCCGGA 1 cut(s) 1294
BspLI GGNNCC 2 cut(s) 596, 978
BspMI ACCTGC 1 cut(s) 446
BspPI GGATC 3 cut(s) 634, 787, 1305
BsrBI CCGCTC 1 cut(s) 969
BsrDI GCAATG 1 cut(s) 148
BsrGI TGTACA 1 cut(s) 1029
BsrI ACTGG 4 cut(s) 73, 379, 409, 1146
BssECI CCNNGG 5 cut(s) 162, 189, 397, 415, 880
BssMI GATC 6 cut(s) 579, 626, 779, 869, 1159, 1297
BssT1I CCWWGG 2 cut(s) 397, 880
Bst2UI CCWGG 3 cut(s) 163, 190, 416
Bst4CI ACNGT 3 cut(s) 326, 367, 848
Bst6I CTCTTC 1 cut(s) 63
BstAUI TGTACA 1 cut(s) 1029
BstC8I GCNNGC 5 cut(s) 126, 394, 453, 564, 1366
BstDEI CTNAG 4 cut(s) 49, 793, 808, 1267
BstDSI CCRYGG 2 cut(s) 397, 880
BstEII GGTNACC 1 cut(s) 458
BstF5I GGATG 4 cut(s) 200, 580, 872, 1255
BstKTI GATC 6 cut(s) 582, 629, 782, 872, 1162, 1300
BstMAI GTCTC 3 cut(s) 74, 649, 919
BstMBI GATC 6 cut(s) 579, 626, 779, 869, 1159, 1297
BstMCI CGRYCG 1 cut(s) 850
BstMWI GCNNNNNNNGC 1 cut(s) 1374
BstNI CCWGG 3 cut(s) 163, 190, 416
BstNSI RCATGY 1 cut(s) 396
BstPI GGTNACC 1 cut(s) 458
BstSCI CCNGG 4 cut(s) 161, 188, 245, 414
BstXI CCANNNNNNTGG 3 cut(s) 196, 386, 404
Bsu15I ATCGAT 1 cut(s) 952
BsuRI GGCC 8 cut(s) 94, 147, 174, 420, 597, 799, 1195, 1442
BsuTUI ATCGAT 1 cut(s) 952
BtgI CCRYGG 2 cut(s) 397, 880
BtsCI GGATG 4 cut(s) 200, 580, 872, 1255
BtsIMutI CAGTG 1 cut(s) 336
BveI ACCTGC 1 cut(s) 446
Cac8I GCNNGC 5 cut(s) 126, 394, 453, 564, 1366
Cfr13I GGNCC 5 cut(s) 418, 595, 716, 732, 797
ClaI ATCGAT 1 cut(s) 952
Csp6I GTAC 5 cut(s) 258, 677, 747, 1030, 1471
CspCI CAANNNNNGTGG 4 cut(s) 710, 745, 1227, 1262
CviQI GTAC 5 cut(s) 258, 677, 747, 1030, 1471
DdeI CTNAG 4 cut(s) 49, 793, 808, 1267
DpnI GATC 6 cut(s) 581, 628, 781, 871, 1161, 1299
DpnII GATC 6 cut(s) 579, 626, 779, 869, 1159, 1297
DraIII CACNNNGTG 1 cut(s) 743
EaeI YGGCCR 2 cut(s) 145, 172
Eam1104I CTCTTC 1 cut(s) 63
EarI CTCTTC 1 cut(s) 63
Eco130I CCWWGG 2 cut(s) 397, 880
Eco147I AGGCCT 2 cut(s) 94, 1195
Eco24I GRGCYC 1 cut(s) 1268
Eco47I GGWCC 2 cut(s) 716, 732
Eco91I GGTNACC 1 cut(s) 458
EcoO109I RGGNCCY 2 cut(s) 595, 797
EcoO65I GGTNACC 1 cut(s) 458
EcoRI GAATTC 1 cut(s) 516
EcoRII CCWGG 3 cut(s) 161, 188, 414
EcoT14I CCWWGG 2 cut(s) 397, 880
EcoT22I ATGCAT 1 cut(s) 513
EcoT38I GRGCYC 1 cut(s) 1268
ErhI CCWWGG 2 cut(s) 397, 880
Esp3I CGTCTC 1 cut(s) 74
FaqI GGGAC 2 cut(s) 206, 415
FbaI TGATCA 1 cut(s) 579
FokI GGATG 4 cut(s) 187, 587, 859, 1262
FriOI GRGCYC 1 cut(s) 1268
FspBI CTAG 4 cut(s) 1197, 1317, 1410, 1477
GsaI CCCAGC 1 cut(s) 1236
GsuI CTGGAG 2 cut(s) 56, 172
HaeIII GGCC 8 cut(s) 94, 147, 174, 420, 597, 799, 1195, 1442
HapII CCGG 2 cut(s) 246, 1295
HincII GTYRAC 1 cut(s) 280
HindII GTYRAC 1 cut(s) 280
HindIII AAGCTT 2 cut(s) 941, 1002
HinfI GANTC 8 cut(s) 341, 642, 791, 806, 896, 954, 1291, 1425
HpaI GTTAAC 1 cut(s) 280
HpaII CCGG 2 cut(s) 246, 1295
HphI GGTGA 3 cut(s) 470, 891, 1163
Hpy166II GTNNAC 4 cut(s) 109, 280, 732, 1030
Hpy188III TCNNGA 9 cut(s) 41, 85, 557, 572, 665, 823, 1121, 1295, 1397
Hpy8I GTNNAC 4 cut(s) 109, 280, 732, 1030
Hpy99I CGWCG 1 cut(s) 829
HpyAV CCTTC 2 cut(s) 265, 810
HpyCH4III ACNGT 3 cut(s) 326, 367, 848
HpyCH4IV ACGT 2 cut(s) 67, 757
HpyCH4V TGCA 5 cut(s) 392, 511, 1022, 1331, 1364
HpyF10VI GCNNNNNNNGC 1 cut(s) 1374
HpyF3I CTNAG 4 cut(s) 49, 793, 808, 1267
HpySE526I ACGT 2 cut(s) 67, 757
Kpn2I TCCGGA 1 cut(s) 1294
Ksp22I TGATCA 1 cut(s) 579
KspAI GTTAAC 1 cut(s) 280
Kzo9I GATC 6 cut(s) 579, 626, 779, 869, 1159, 1297
LmnI GCTCC 2 cut(s) 191, 604
LweI GCATC 5 cut(s) 209, 1009, 1135, 1214, 1380
MaeI CTAG 4 cut(s) 1197, 1317, 1410, 1477
MaeII ACGT 2 cut(s) 67, 757
MaeIII GTNAC 3 cut(s) 334, 458, 1169
MalI GATC 6 cut(s) 581, 628, 781, 871, 1161, 1299
MbiI CCGCTC 1 cut(s) 969
MboI GATC 6 cut(s) 579, 626, 779, 869, 1159, 1297
MboII GAAGA 7 cut(s) 17, 50, 109, 320, 599, 879, 1267
MhlI GDGCHC 1 cut(s) 1268
MlsI TGGCCA 2 cut(s) 147, 174
MluNI TGGCCA 2 cut(s) 147, 174
MlyI GAGTC 5 cut(s) 335, 651, 785, 800, 1300
MmeI TCCRAC 3 cut(s) 793, 900, 1102
Mox20I TGGCCA 2 cut(s) 147, 174
Mph1103I ATGCAT 1 cut(s) 513
MroI TCCGGA 1 cut(s) 1294
MroXI GAANNNNTTC 1 cut(s) 706
MscI TGGCCA 2 cut(s) 147, 174
MseI TTAA 4 cut(s) 279, 374, 854, 945
Msp20I TGGCCA 2 cut(s) 147, 174
MspA1I CMGCKG 2 cut(s) 713, 931
MspI CCGG 2 cut(s) 246, 1295
MspR9I CCNGG 4 cut(s) 163, 190, 247, 416
Mva1269I GAATGC 3 cut(s) 513, 838, 1333
MvaI CCWGG 3 cut(s) 163, 190, 416
MwoI GCNNNNNNNGC 1 cut(s) 1374
NciI CCSGG 1 cut(s) 247
NcoI CCATGG 2 cut(s) 397, 880
NdeII GATC 6 cut(s) 579, 626, 779, 869, 1159, 1297
NlaIV GGNNCC 2 cut(s) 596, 978
NmuCI GTSAC 3 cut(s) 334, 458, 1169
NsiI ATGCAT 1 cut(s) 513
NspI RCATGY 1 cut(s) 396
PaeI GCATGC 1 cut(s) 396
PaqCI CACCTGC 1 cut(s) 446
PceI AGGCCT 2 cut(s) 94, 1195
PctI GAATGC 3 cut(s) 513, 838, 1333
PdmI GAANNNNTTC 1 cut(s) 706
PfeI GAWTC 3 cut(s) 896, 954, 1425
PflFI GACNNNGTC 1 cut(s) 809
PflMI CCANNNNNTGG 1 cut(s) 35
PleI GAGTC 5 cut(s) 335, 650, 785, 800, 1299
PpsI GAGTC 5 cut(s) 335, 650, 785, 800, 1299
PsiI TTATAA 1 cut(s) 1460
Psp1406I AACGTT 1 cut(s) 757
Psp6I CCWGG 3 cut(s) 161, 188, 414
PspEI GGTNACC 1 cut(s) 458
PspFI CCCAGC 1 cut(s) 1232
PspGI CCWGG 3 cut(s) 161, 188, 414
PspN4I GGNNCC 2 cut(s) 596, 978
PspPI GGNCC 5 cut(s) 418, 595, 716, 732, 797
PsyI GACNNNGTC 1 cut(s) 809
PvuII CAGCTG 1 cut(s) 713
RsaI GTAC 5 cut(s) 259, 678, 748, 1031, 1472
RsaNI GTAC 5 cut(s) 258, 677, 747, 1030, 1471
SaqAI TTAA 4 cut(s) 279, 374, 854, 945
Sau3AI GATC 6 cut(s) 579, 626, 779, 869, 1159, 1297
Sau96I GGNCC 5 cut(s) 418, 595, 716, 732, 797
SchI GAGTC 5 cut(s) 335, 651, 785, 800, 1300
ScrFI CCNGG 4 cut(s) 163, 190, 247, 416
SduI GDGCHC 1 cut(s) 1268
SfaNI GCATC 5 cut(s) 209, 1009, 1135, 1214, 1380
SinI GGWCC 2 cut(s) 716, 732
SmlI CTYRAG 2 cut(s) 557, 1121
SmoI CTYRAG 2 cut(s) 557, 1121
SphI GCATGC 1 cut(s) 396
SseBI AGGCCT 2 cut(s) 94, 1195
SsiI CCGC 6 cut(s) 438, 735, 836, 931, 967, 1452
SspI AATATT 1 cut(s) 772
SspMI CTAG 4 cut(s) 1197, 1317, 1410, 1477
StuI AGGCCT 2 cut(s) 94, 1195
StyD4I CCNGG 4 cut(s) 161, 188, 245, 414
StyI CCWWGG 2 cut(s) 397, 880
TaaI ACNGT 3 cut(s) 326, 367, 848
TaiI ACGT 2 cut(s) 70, 760
TaqI TCGA 5 cut(s) 505, 850, 952, 989, 1158
TatI WGTACW 2 cut(s) 676, 1029
TfiI GAWTC 3 cut(s) 896, 954, 1425
Tru1I TTAA 4 cut(s) 279, 374, 854, 945
Tru9I TTAA 4 cut(s) 279, 374, 854, 945
TscAI CASTG 1 cut(s) 343
TseFI GTSAC 3 cut(s) 334, 458, 1169
Tsp45I GTSAC 3 cut(s) 334, 458, 1169
TspDTI ATGAA 5 cut(s) 67, 241, 321, 534, 1340
TspGWI ACGGA 2 cut(s) 275, 842
TspRI CASTG 1 cut(s) 343
Tth111I GACNNNGTC 1 cut(s) 809
Van91I CCANNNNNTGG 1 cut(s) 35
VpaK11BI GGWCC 2 cut(s) 716, 732
XapI RAATTY 2 cut(s) 516, 817
XceI RCATGY 1 cut(s) 396
XmnI GAANNNNTTC 1 cut(s) 706
XspI CTAG 4 cut(s) 1197, 1317, 1410, 1477
Zsp2I ATGCAT 1 cut(s) 513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.