pycom06g11150
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0000212
Physical Location & Seq
Forward (+)
16417889 .. 16437527
19639 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g11150.3

Sequence Viewer

Length: 1443 bp
ATGGAGGAAACTAATTCCTCCTGTTCTTCATACAATTTTGGTCAAGAAAACTCACCCACACTTCAACGTCTCCAGTTCATAATTCAGAATAGGCCCGAACAGTGGGTCTATTCAATTTTCTGGCAAGCCTCATCAAAAGACAGCAATGACCTAGTTTCTTTGTCGTGGGCTGATGGCCATTTTCGAAGCACTGGGGACTTGGCCTCCAAACAAAGTTACAACAAAGCCAATCTGACCATGATACGAGTTCAGTTTGTGGAGAGGAAAAAGGGGATTAGCAGAGAAGTTGACGCTCTTTTCTATGAAGGCATGGATTTGGATGGTGGAGACGTTACCGATGCTGAGTGGTTTTACTTTTACACTGTCTCTTTAACCCAGTCATTTACTGCCGGCCACGGTAATAGTAACATTCTGGGCCGTACGTTTTGTTCTGGTGGTTTTGTTTGGCTGGCAGGTGATCATGAGCTTCAATTCTATGAGTGTGAGAGAGTGAAGAAAGCAAGAATGCATGGAATTCAAACTTTGGTTTGTATTGCAACTTCATGCGGAGTACTTGAACTCGCTTCTTTGGATGCGATCAAAGTAGATTGGGGTCTTGTGCAGATATCAAAATCACTTTTCGGATCAAAGAACAACAACAACATGGTCTCAAAGCAGCTGAGCAGCAGCCGTGAGGACCATGTACTTGTTCCGCTACTAGAAAGTGGAATGTTTTCGGAAGCTGAACAAAGAGACTGGACAACACAAGGTGGTACAAAAGAAGTACCTCCTGTGACTATAGGTGGATCATCATCCGACTCAGGACCTTCCGACTCTGTTGGAAATTTCACCTCTGAGAATATGGAGAACATACGACTGAAAAAGAGAGGACGCTCATCAAACCGTGAAACTGGTAGATCAGAAACACCAATAAACCATGTTGAGGCAGAGAGACAGAGGCGAGAGAAGCTTAACCGTCGATTCTATGCCCTCCGCGCTGTTGTTCCCAATGTGTCCAGAATGGACAAAGCTTCTTTACTTTCTGATGCAGTTGTATACATCAATGAGCTGAAAGCAAGGGTTGAGCAACTGGAGGCCAAAATCCAAGCACAACACCTGAAGCCCGTTGTTGACATTGGAGGCCAAACCACCAGCTCCATAATTGATCATCATCAAACAAGGCCGCGGCTATCATCAAGTTATGATAATAAAGCAGCTGGGGTTATGGAAATAGATGTGAAGATCGTAGGCTCAGAAGCCATGATACGAGTTCAGTGTCCGGATTGCGATTACCCTAATGCTAGATTGATGAATGCACTCAAAGACCTGGAGTTACAAGTTTATCATGCAAGCATATCAAGTGTGAAAGGGTTGATGCTTCAAGATGTTGTGGCAAGAGTGCCTCAGGGTTTCACAAGTGAGGAGGCCCTGAGAATTGCTATTATAAATAGATGGTACAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

481

Amino Acids

53.74

Weight (kDa)

6.25

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1424
AarI CACCTGC 1 cut(s) 443
Acc36I ACCTGC 1 cut(s) 443
AccI GTMKAC 1 cut(s) 1035
AccII CGCG 2 cut(s) 975, 1165
AccIII TCCGGA 1 cut(s) 1258
AciI CCGC 5 cut(s) 546, 692, 973, 1163, 1165
AclWI GGATC 2 cut(s) 631, 793
AcoI YGGCCR 2 cut(s) 175, 391
AcsI RAATTY 2 cut(s) 513, 823
AcuI CTGAAG 1 cut(s) 1118
AdeI CACNNNGTG 1 cut(s) 749
AfaI GTAC 6 cut(s) 421, 552, 684, 754, 765, 1436
AfiI CCNNNNNNNGG 2 cut(s) 102, 922
AgsI TTSAA 6 cut(s) 65, 114, 470, 518, 557, 1361
AjnI CCWGG 1 cut(s) 1305
AluBI AGCT 8 cut(s) 466, 658, 722, 949, 1010, 1048, 1134, 1196
AluI AGCT 8 cut(s) 466, 658, 722, 949, 1010, 1048, 1134, 1196
Alw26I GTCTC 6 cut(s) 74, 321, 370, 652, 726, 925
AlwI GGATC 2 cut(s) 631, 793
Aor13HI TCCGGA 1 cut(s) 1258
AoxI GGCC 9 cut(s) 92, 175, 201, 391, 415, 1074, 1120, 1160, 1404
ApeKI GCWGC 4 cut(s) 655, 663, 666, 1193
ApoI RAATTY 2 cut(s) 513, 823
ArsI GACNNNNNNTTYG 2 cut(s) 90, 122
Asp700I GAANNNNTTC 1 cut(s) 712
AspLEI GCGC 1 cut(s) 977
AspS9I GGNCC 5 cut(s) 93, 415, 676, 803, 1405
AsuHPI GGTGA 3 cut(s) 45, 467, 820
AsuII TTCGAA 1 cut(s) 184
AvaII GGWCC 2 cut(s) 676, 803
AxyI CCTNAGG 1 cut(s) 1383
BalI TGGCCA 1 cut(s) 177
BarI GAAGNNNNNNTAC 4 cut(s) 523, 555, 1227, 1259
BbvI GCAGC 4 cut(s) 667, 675, 678, 1205
BccI CCATC 3 cut(s) 167, 314, 1425
BceAI ACGGC 2 cut(s) 402, 654
BciT130I CCWGG 1 cut(s) 1307
BclI TGATCA 2 cut(s) 457, 1144
BcoDI GTCTC 6 cut(s) 74, 321, 370, 652, 726, 925
BfaI CTAG 4 cut(s) 152, 698, 1281, 1441
BfmI CTRYAG 1 cut(s) 777
BfuAI ACCTGC 1 cut(s) 443
BisI GCNGC 6 cut(s) 656, 664, 667, 1163, 1166, 1194
BlpI GCTNAGC 1 cut(s) 659
BlsI GCNGC 6 cut(s) 657, 665, 668, 1164, 1167, 1195
BmcAI AGTACT 1 cut(s) 552
Bme1390I CCNGG 1 cut(s) 1307
Bme18I GGWCC 2 cut(s) 676, 803
BmgT120I GGNCC 5 cut(s) 93, 415, 676, 803, 1405
BmrFI CCNGG 1 cut(s) 1307
BmrI ACTGGG 2 cut(s) 201, 370
BmsI GCATC 4 cut(s) 328, 562, 1015, 1344
BmuI ACTGGG 2 cut(s) 201, 370
BpmI CTGGAG 3 cut(s) 56, 1091, 1328
Bpu1102I GCTNAGC 1 cut(s) 659
Bpu14I TTCGAA 1 cut(s) 184
BsaBI GATNNNNATC 2 cut(s) 790, 1149
BsaI GGTCTC 1 cut(s) 652
BsaJI CCNNGG 2 cut(s) 394, 1163
BsaWI WCCGGW 1 cut(s) 1258
BsaXI ACNNNNNCTCC 2 cut(s) 188, 218
Bsc4I CCNNNNNNNGG 2 cut(s) 102, 922
Bse118I RCCGGY 1 cut(s) 389
Bse1I ACTGG 6 cut(s) 73, 196, 376, 740, 895, 1074
Bse21I CCTNAGG 1 cut(s) 1383
Bse3DI GCAATG 1 cut(s) 151
Bse8I GATNNNNATC 2 cut(s) 790, 1149
BseAI TCCGGA 1 cut(s) 1258
BseBI CCWGG 1 cut(s) 1307
BseDI CCNNGG 2 cut(s) 394, 1163
BseGI GGATG 3 cut(s) 325, 577, 791
BseJI GATNNNNATC 2 cut(s) 790, 1149
BseLI CCNNNNNNNGG 2 cut(s) 102, 922
BseMI GCAATG 1 cut(s) 151
BseMII CTCAG 7 cut(s) 333, 650, 813, 825, 1245, 1397, 1400
BseNI ACTGG 6 cut(s) 73, 196, 376, 740, 895, 1074
BseRI GAGGAG 1 cut(s) 1415
BseXI GCAGC 4 cut(s) 667, 675, 678, 1205
BseYI CCCAGC 1 cut(s) 1196
BsgI GTGCAG 1 cut(s) 620
Bsh1236I CGCG 2 cut(s) 975, 1165
BshFI GGCC 9 cut(s) 94, 177, 203, 393, 417, 1076, 1122, 1162, 1406
BsiSI CCGG 2 cut(s) 390, 1259
BsiWI CGTACG 1 cut(s) 419
BslFI GGGAC 1 cut(s) 209
BslI CCNNNNNNNGG 2 cut(s) 102, 922
BsmAI GTCTC 6 cut(s) 74, 321, 370, 652, 726, 925
BsmBI CGTCTC 2 cut(s) 74, 321
BsmFI GGGAC 1 cut(s) 209
BsmI GAATGC 2 cut(s) 510, 1297
BsnI GGCC 9 cut(s) 94, 177, 203, 393, 417, 1076, 1122, 1162, 1406
Bso31I GGTCTC 1 cut(s) 652
Bsp119I TTCGAA 1 cut(s) 184
Bsp13I TCCGGA 1 cut(s) 1258
Bsp143I GATC 7 cut(s) 457, 576, 623, 785, 896, 1144, 1221
Bsp1720I GCTNAGC 1 cut(s) 659
BspACI CCGC 5 cut(s) 546, 692, 973, 1163, 1165
BspANI GGCC 9 cut(s) 94, 177, 203, 393, 417, 1076, 1122, 1162, 1406
BspCNI CTCAG 7 cut(s) 334, 651, 812, 826, 1244, 1396, 1401
BspEI TCCGGA 1 cut(s) 1258
BspFNI CGCG 2 cut(s) 975, 1165
BspHI TCATGA 1 cut(s) 460
BspMI ACCTGC 1 cut(s) 443
BspPI GGATC 2 cut(s) 631, 793
BspT104I TTCGAA 1 cut(s) 184
BspTNI GGTCTC 1 cut(s) 652
BsrDI GCAATG 1 cut(s) 151
BsrFI RCCGGY 1 cut(s) 389
BsrI ACTGG 6 cut(s) 73, 196, 376, 740, 895, 1074
BssAI RCCGGY 1 cut(s) 389
BssECI CCNNGG 2 cut(s) 394, 1163
BssMI GATC 7 cut(s) 457, 576, 623, 785, 896, 1144, 1221
BssNAI GTATAC 1 cut(s) 1036
Bst1107I GTATAC 1 cut(s) 1036
Bst2UI CCWGG 1 cut(s) 1307
Bst4CI ACNGT 5 cut(s) 102, 364, 398, 884, 956
BstBI TTCGAA 1 cut(s) 184
BstC8I GCNNGC 4 cut(s) 126, 391, 450, 1330
BstDEI CTNAG 7 cut(s) 342, 659, 799, 834, 1231, 1383, 1409
BstDSI CCRYGG 2 cut(s) 394, 1163
BstF5I GGATG 3 cut(s) 325, 577, 791
BstFNI CGCG 2 cut(s) 975, 1165
BstHHI GCGC 1 cut(s) 977
BstKTI GATC 7 cut(s) 460, 579, 626, 788, 899, 1147, 1224
BstMAI GTCTC 6 cut(s) 74, 321, 370, 652, 726, 925
BstMBI GATC 7 cut(s) 457, 576, 623, 785, 896, 1144, 1221
BstMWI GCNNNNNNNGC 2 cut(s) 946, 974
BstNI CCWGG 1 cut(s) 1307
BstSCI CCNGG 1 cut(s) 1305
BstSFI CTRYAG 1 cut(s) 777
BstUI CGCG 2 cut(s) 975, 1165
BstV1I GCAGC 4 cut(s) 667, 675, 678, 1205
BstZ17I GTATAC 1 cut(s) 1036
Bsu36I CCTNAGG 1 cut(s) 1383
BsuRI GGCC 9 cut(s) 94, 177, 203, 393, 417, 1076, 1122, 1162, 1406
BtgI CCRYGG 2 cut(s) 394, 1163
BtsCI GGATG 3 cut(s) 325, 577, 791
BtsIMutI CAGTG 4 cut(s) 107, 189, 360, 1259
BveI ACCTGC 1 cut(s) 443
Cac8I GCNNGC 4 cut(s) 126, 391, 450, 1330
CciI TCATGA 1 cut(s) 460
CfoI GCGC 1 cut(s) 977
Cfr10I RCCGGY 1 cut(s) 389
Cfr13I GGNCC 5 cut(s) 93, 415, 676, 803, 1405
Cfr42I CCGCGG 1 cut(s) 1166
CseI GACGC 2 cut(s) 299, 879
Csp6I GTAC 6 cut(s) 420, 551, 683, 753, 764, 1435
CviQI GTAC 6 cut(s) 420, 551, 683, 753, 764, 1435
DdeI CTNAG 7 cut(s) 342, 659, 799, 834, 1231, 1383, 1409
DpnI GATC 7 cut(s) 459, 578, 625, 787, 898, 1146, 1223
DpnII GATC 7 cut(s) 457, 576, 623, 785, 896, 1144, 1221
DraIII CACNNNGTG 1 cut(s) 749
EaeI YGGCCR 2 cut(s) 175, 391
Eco31I GGTCTC 1 cut(s) 652
Eco32I GATATC 1 cut(s) 606
Eco47I GGWCC 2 cut(s) 676, 803
Eco57I CTGAAG 1 cut(s) 1118
Eco81I CCTNAGG 1 cut(s) 1383
EcoO109I RGGNCCY 2 cut(s) 803, 1405
EcoRI GAATTC 1 cut(s) 513
EcoRII CCWGG 1 cut(s) 1305
EcoRV GATATC 1 cut(s) 606
EcoT22I ATGCAT 1 cut(s) 510
Esp3I CGTCTC 2 cut(s) 74, 321
FaqI GGGAC 1 cut(s) 209
FbaI TGATCA 2 cut(s) 457, 1144
FblI GTMKAC 1 cut(s) 1035
Fnu4HI GCNGC 6 cut(s) 656, 664, 667, 1163, 1166, 1194
FokI GGATG 3 cut(s) 332, 584, 778
Fsp4HI GCNGC 6 cut(s) 656, 664, 667, 1163, 1166, 1194
FspBI CTAG 4 cut(s) 152, 698, 1281, 1441
GlaI GCGC 1 cut(s) 976
GluI GCNGC 6 cut(s) 656, 664, 667, 1163, 1166, 1194
GsaI CCCAGC 1 cut(s) 1200
GsuI CTGGAG 3 cut(s) 56, 1091, 1328
HaeIII GGCC 9 cut(s) 94, 177, 203, 393, 417, 1076, 1122, 1162, 1406
HapII CCGG 2 cut(s) 390, 1259
HgaI GACGC 2 cut(s) 299, 879
HhaI GCGC 1 cut(s) 977
Hin6I GCGC 1 cut(s) 975
HinP1I GCGC 1 cut(s) 975
HincII GTYRAC 2 cut(s) 289, 1111
HindII GTYRAC 2 cut(s) 289, 1111
HindIII AAGCTT 2 cut(s) 947, 1008
HinfI GANTC 3 cut(s) 797, 812, 960
HpaII CCGG 2 cut(s) 390, 1259
HphI GGTGA 3 cut(s) 45, 467, 820
Hpy166II GTNNAC 3 cut(s) 289, 1036, 1111
Hpy188III TCNNGA 6 cut(s) 44, 461, 801, 996, 1259, 1361
Hpy8I GTNNAC 3 cut(s) 289, 1036, 1111
Hpy99I CGWCG 1 cut(s) 960
HpyAV CCTTC 2 cut(s) 299, 816
HpyCH4III ACNGT 5 cut(s) 102, 364, 398, 884, 956
HpyCH4IV ACGT 3 cut(s) 67, 330, 422
HpyCH4V TGCA 6 cut(s) 508, 536, 601, 1028, 1295, 1328
HpyF10VI GCNNNNNNNGC 2 cut(s) 946, 974
HpyF3I CTNAG 7 cut(s) 342, 659, 799, 834, 1231, 1383, 1409
HpySE526I ACGT 3 cut(s) 67, 330, 422
HspAI GCGC 1 cut(s) 975
Kpn2I TCCGGA 1 cut(s) 1258
KroI GCCGGC 1 cut(s) 389
KroNI GCCGGC 1 cut(s) 391
Ksp22I TGATCA 2 cut(s) 457, 1144
KspI CCGCGG 1 cut(s) 1166
Kzo9I GATC 7 cut(s) 457, 576, 623, 785, 896, 1144, 1221
LmnI GCTCC 1 cut(s) 1139
Lsp1109I GCAGC 4 cut(s) 667, 675, 678, 1205
LweI GCATC 4 cut(s) 328, 562, 1015, 1344
MaeI CTAG 4 cut(s) 152, 698, 1281, 1441
MaeII ACGT 3 cut(s) 67, 330, 422
MaeIII GTNAC 5 cut(s) 215, 331, 404, 772, 1311
MalI GATC 7 cut(s) 459, 578, 625, 787, 898, 1146, 1223
MboI GATC 7 cut(s) 457, 576, 623, 785, 896, 1144, 1221
MboII GAAGA 3 cut(s) 18, 505, 1231
MlsI TGGCCA 1 cut(s) 177
MluCI AATT 9 cut(s) 13, 34, 81, 114, 470, 513, 823, 1140, 1413
MluNI TGGCCA 1 cut(s) 177
MlyI GAGTC 2 cut(s) 791, 806
MmeI TCCRAC 3 cut(s) 799, 819, 834
Mox20I TGGCCA 1 cut(s) 177
Mph1103I ATGCAT 1 cut(s) 510
MroI TCCGGA 1 cut(s) 1258
MroNI GCCGGC 1 cut(s) 389
MroXI GAANNNNTTC 1 cut(s) 712
MscI TGGCCA 1 cut(s) 177
MseI TTAA 2 cut(s) 371, 951
Msp20I TGGCCA 1 cut(s) 177
MspA1I CMGCKG 3 cut(s) 658, 1165, 1196
MspI CCGG 2 cut(s) 390, 1259
MspR9I CCNGG 1 cut(s) 1307
Mva1269I GAATGC 2 cut(s) 510, 1297
MvaI CCWGG 1 cut(s) 1307
MvnI CGCG 2 cut(s) 975, 1165
MwoI GCNNNNNNNGC 2 cut(s) 946, 974
NaeI GCCGGC 1 cut(s) 391
NdeII GATC 7 cut(s) 457, 576, 623, 785, 896, 1144, 1221
NgoMIV GCCGGC 1 cut(s) 389
NmuCI GTSAC 1 cut(s) 772
NsiI ATGCAT 1 cut(s) 510
NspV TTCGAA 1 cut(s) 184
PagI TCATGA 1 cut(s) 460
PaqCI CACCTGC 1 cut(s) 443
PctI GAATGC 2 cut(s) 510, 1297
PdiI GCCGGC 1 cut(s) 391
PdmI GAANNNNTTC 1 cut(s) 712
PfeI GAWTC 1 cut(s) 960
Pfl23II CGTACG 1 cut(s) 419
PkrI GCNGC 6 cut(s) 657, 665, 668, 1164, 1167, 1195
PleI GAGTC 2 cut(s) 791, 806
PpsI GAGTC 2 cut(s) 791, 806
PpuMI RGGWCCY 1 cut(s) 803
PsiI TTATAA 1 cut(s) 1424
Psp5II RGGWCCY 1 cut(s) 803
Psp6I CCWGG 1 cut(s) 1305
PspFI CCCAGC 1 cut(s) 1196
PspGI CCWGG 1 cut(s) 1305
PspLI CGTACG 1 cut(s) 419
PspPI GGNCC 5 cut(s) 93, 415, 676, 803, 1405
PspPPI RGGWCCY 1 cut(s) 803
PsrI GAACNNNNNNTAC 2 cut(s) 412, 444
PvuII CAGCTG 2 cut(s) 658, 1196
RsaI GTAC 6 cut(s) 421, 552, 684, 754, 765, 1436
RsaNI GTAC 6 cut(s) 420, 551, 683, 753, 764, 1435
SacII CCGCGG 1 cut(s) 1166
SaqAI TTAA 2 cut(s) 371, 951
SatI GCNGC 6 cut(s) 656, 664, 667, 1163, 1166, 1194
Sau3AI GATC 7 cut(s) 457, 576, 623, 785, 896, 1144, 1221
Sau96I GGNCC 5 cut(s) 93, 415, 676, 803, 1405
ScaI AGTACT 1 cut(s) 552
SchI GAGTC 2 cut(s) 791, 806
ScrFI CCNGG 1 cut(s) 1307
SfaNI GCATC 4 cut(s) 328, 562, 1015, 1344
SfcI CTRYAG 1 cut(s) 777
Sfr303I CCGCGG 1 cut(s) 1166
SfuI TTCGAA 1 cut(s) 184
SgrBI CCGCGG 1 cut(s) 1166
SinI GGWCC 2 cut(s) 676, 803
Sse9I AATT 9 cut(s) 13, 34, 81, 114, 470, 513, 823, 1140, 1413
SsiI CCGC 5 cut(s) 546, 692, 973, 1163, 1165
SspMI CTAG 4 cut(s) 152, 698, 1281, 1441
StyD4I CCNGG 1 cut(s) 1305
TaaI ACNGT 5 cut(s) 102, 364, 398, 884, 956
TaiI ACGT 3 cut(s) 70, 333, 425
TaqI TCGA 2 cut(s) 184, 958
TasI AATT 9 cut(s) 13, 34, 81, 114, 470, 513, 823, 1140, 1413
TatI WGTACW 2 cut(s) 550, 682
TauI GCSGC 2 cut(s) 1165, 1168
TfiI GAWTC 1 cut(s) 960
Tru1I TTAA 2 cut(s) 371, 951
Tru9I TTAA 2 cut(s) 371, 951
TscAI CASTG 4 cut(s) 107, 196, 367, 1259
TseFI GTSAC 1 cut(s) 772
TseI GCWGC 4 cut(s) 655, 663, 666, 1193
Tsp45I GTSAC 1 cut(s) 772
TspDTI ATGAA 5 cut(s) 18, 67, 318, 531, 1304
TspRI CASTG 4 cut(s) 107, 196, 367, 1259
VpaK11BI GGWCC 2 cut(s) 676, 803
XapI RAATTY 2 cut(s) 513, 823
XmiI GTMKAC 1 cut(s) 1035
XmnI GAANNNNTTC 1 cut(s) 712
XspI CTAG 4 cut(s) 152, 698, 1281, 1441
ZrmI AGTACT 1 cut(s) 552
Zsp2I ATGCAT 1 cut(s) 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.