Prupe.5G130600_v2.0.a1
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000212
Physical Location & Seq
Forward (+)
12620363 .. 12622662
2300 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G130600.1

Sequence Viewer

Length: 1353 bp
ATGGAAGAAATTCTTTCCTCAAGCTCCCCAACAAATTTTTGTCAGGAAAACTCCTCCACATTTCAAAAACGGCTCCAGTTCATATTTCGGAACAGGCCTGAGTGGTGGCTGTATTCAATCTTCTGGCAAGCCTCCAATGACAGCAACGACCAAGTCTCTTTGTCATGGGCTGGTGGCGATTTCCGAATCAACAGAGACTTGGCCACCAAAAGAAGCAACAAGGTGGTCAACAATTACAACCCAAAATTTGGGTTCAACAATGTGGAGAGAAGGAAGGTGGTGAACAAAGACGTTGAAGATCTTTTCCATGAAGACCTGGTGGACTTGGCAATGGTGGATCATGGAGATGTCACCGACTCCGAGTGGTTTTACTTTTACAGCGTTTCTTTAACCCAGACGTTTGTTGCAGGCCACGCCAGCAACAATGTTCTGGGCCGTGCGTTTTGTTCTGGAGGTTTTGTTTGGCTGGCAGGTGCTCATGAGCTTCAGTTTTATGAGTGTGAGAGAGTGAAGGAGGCTAGAATGCATGGAATTCAAACTCTGGTTTGTATTGCAACTCCTTGTGGGGTGCTTGAGCTCGCTTCTTTGGATGTCATCAAAGAAGATTGCGGCCTCGTGCATCTATCGAAATCGCTTTTCGGATCAGACAACAACAAGAAGGTCTCGCAGGAGGGCAGCTGTGAGGGCAATGCACTTGTTCATCTGCTAGAAAATGGCATGTTTTCAGGAGCTCAAAAGGAGATGACCAGACAAGGTTGTACAAAAGAAGCTGCACATATCAATATCTGCGACTCATCACCAGACTCACCTTCGGACTCTGTTGGCAATTTCACCTCTGAGAATACAGCGAACACTCGATCGAAAAAGAAAAAAAGATCATCGTCAACTAACGGCGCTAGTAGAGCATCACAATTATTAAACCATGTTGAGGCAGAGAGACAAAGAAGAGAGAAGCTTAACCATCGTTTCTATGTCCTCCGCTCTGTGGTTCCTAATGTATCGAAAATGGACAGATCTTCTTTGCTTGCTGATGCTGCGTCATACATCAACCAGCTCAAAGCAAAGGTTGAGGAATTGGAGGCCAAAGTACAAGAACAACCCAAAAACCCCAAAGTGAGCAATGCAAGTAGCATTGATCATCAGAGCAGCCAAAGCACCAGTTCCATAGTTAATCATCCTCATTCAAGTTATAACAATAGATCAGTTGCTCCTTTGGAAGTGGATGTGAAGATTTTGGGCTCCGAAGCCATGATCCGAGTTCAGTGTCCAGATCAAGACTACCCATATGCTAGGTTGATGAATGCACTCAAAGCCCTAGGGTTACAGTTTACCATGCAAGCATATCAAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

451

Amino Acids

50.42

Weight (kDa)

6.68

Isoelectric Point (pI)

50.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1191
AarI CACCTGC 1 cut(s) 461
Acc36I ACCTGC 1 cut(s) 461
AccB7I CCANNNNNTGG 1 cut(s) 248
AccBSI CCGCTC 1 cut(s) 981
AciI CCGC 2 cut(s) 609, 979
AclWI GGATC 3 cut(s) 345, 649, 1246
AcoI YGGCCR 1 cut(s) 201
AcsI RAATTY 4 cut(s) 9, 34, 245, 531
AcuI CTGAAG 1 cut(s) 470
AfaI GTAC 2 cut(s) 760, 1089
AfiI CCNNNNNNNGG 3 cut(s) 248, 928, 985
AgsI TTSAA 6 cut(s) 65, 117, 256, 296, 536, 1185
AjnI CCWGG 1 cut(s) 315
AluBI AGCT 8 cut(s) 24, 484, 577, 678, 731, 770, 955, 1054
AluI AGCT 8 cut(s) 24, 484, 577, 678, 731, 770, 955, 1054
Alw21I GWGCWC 3 cut(s) 478, 579, 733
Alw26I GTCTC 4 cut(s) 160, 189, 667, 931
AlwI GGATC 3 cut(s) 345, 649, 1246
AoxI GGCC 6 cut(s) 95, 201, 409, 433, 610, 1080
ApeKI GCWGC 4 cut(s) 675, 770, 1034, 1146
ApoI RAATTY 4 cut(s) 9, 34, 245, 531
Asp700I GAANNNNTTC 1 cut(s) 9
AspA2I CCTAGG 1 cut(s) 1315
AspLEI GCGC 1 cut(s) 896
AspS9I GGNCC 1 cut(s) 433
AsuHPI GGTGA 5 cut(s) 292, 343, 789, 798, 823
AvrII CCTAGG 1 cut(s) 1315
BalI TGGCCA 1 cut(s) 203
BanII GRGCYC 3 cut(s) 579, 733, 1241
BarI GAAGNNNNNNTAC 2 cut(s) 104, 136
BauI CACGAG 1 cut(s) 614
BbsI GAAGAC 1 cut(s) 318
Bbv12I GWGCWC 3 cut(s) 478, 579, 733
BbvI GCAGC 4 cut(s) 687, 757, 1021, 1158
BccI CCATC 1 cut(s) 969
BceAI ACGGC 3 cut(s) 86, 420, 907
BciT130I CCWGG 1 cut(s) 317
BclI TGATCA 1 cut(s) 1135
BcoDI GTCTC 4 cut(s) 160, 189, 667, 931
BfaI CTAG 5 cut(s) 519, 707, 897, 1290, 1316
BfoI RGCGCY 1 cut(s) 897
BfuAI ACCTGC 1 cut(s) 461
BglII AGATCT 2 cut(s) 298, 1013
BisI GCNGC 5 cut(s) 610, 676, 771, 1035, 1147
BlnI CCTAGG 1 cut(s) 1315
BlsI GCNGC 5 cut(s) 611, 677, 772, 1036, 1148
Bme1390I CCNGG 1 cut(s) 317
BmgT120I GGNCC 1 cut(s) 433
BmiI GGNNCC 3 cut(s) 74, 990, 1240
BmrFI CCNGG 1 cut(s) 317
BmsI GCATC 3 cut(s) 628, 914, 1021
BpiI GAAGAC 1 cut(s) 318
BpmI CTGGAG 2 cut(s) 59, 471
BpuEI CTTGAG 2 cut(s) 4, 593
BsaI GGTCTC 1 cut(s) 667
BsaJI CCNNGG 1 cut(s) 1315
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 3 cut(s) 248, 928, 985
Bse1I ACTGG 2 cut(s) 76, 1158
Bse3DI GCAATG 3 cut(s) 336, 694, 1126
BseBI CCWGG 1 cut(s) 317
BseDI CCNNGG 1 cut(s) 1315
BseGI GGATG 3 cut(s) 595, 1174, 1228
BseLI CCNNNNNNNGG 3 cut(s) 248, 928, 985
BseMI GCAATG 3 cut(s) 336, 694, 1126
BseMII CTCAG 2 cut(s) 90, 828
BseNI ACTGG 2 cut(s) 76, 1158
BseRI GAGGAG 1 cut(s) 43
BseXI GCAGC 4 cut(s) 687, 757, 1021, 1158
BsgI GTGCAG 1 cut(s) 756
Bsh1285I CGRYCG 1 cut(s) 860
BshFI GGCC 6 cut(s) 97, 203, 411, 435, 612, 1082
BsiEI CGRYCG 1 cut(s) 860
BsiHKAI GWGCWC 3 cut(s) 478, 579, 733
BslI CCNNNNNNNGG 3 cut(s) 248, 928, 985
BsmAI GTCTC 4 cut(s) 160, 189, 667, 931
BsmI GAATGC 2 cut(s) 528, 1306
BsnI GGCC 6 cut(s) 97, 203, 411, 435, 612, 1082
Bso31I GGTCTC 1 cut(s) 667
Bsp1286I GDGCHC 4 cut(s) 478, 579, 733, 1241
Bsp1407I TGTACA 1 cut(s) 758
BspACI CCGC 2 cut(s) 609, 979
BspANI GGCC 6 cut(s) 97, 203, 411, 435, 612, 1082
BspCNI CTCAG 2 cut(s) 91, 829
BspHI TCATGA 1 cut(s) 478
BspLI GGNNCC 3 cut(s) 74, 990, 1240
BspMI ACCTGC 1 cut(s) 461
BspPI GGATC 3 cut(s) 345, 649, 1246
BspTNI GGTCTC 1 cut(s) 667
BsrBI CCGCTC 1 cut(s) 981
BsrDI GCAATG 3 cut(s) 336, 694, 1126
BsrGI TGTACA 1 cut(s) 758
BsrI ACTGG 2 cut(s) 76, 1158
BssECI CCNNGG 1 cut(s) 1315
BssSI CACGAG 1 cut(s) 614
BssT1I CCWWGG 1 cut(s) 1315
Bst2BI CACGAG 1 cut(s) 614
Bst2UI CCWGG 1 cut(s) 317
Bst4CI ACNGT 1 cut(s) 1326
Bst6I CTCTTC 1 cut(s) 940
BstAUI TGTACA 1 cut(s) 758
BstC8I GCNNGC 7 cut(s) 129, 409, 418, 468, 579, 1026, 1338
BstDEI CTNAG 2 cut(s) 99, 837
BstF5I GGATG 3 cut(s) 595, 1174, 1228
BstH2I RGCGCY 1 cut(s) 897
BstHHI GCGC 1 cut(s) 896
BstMAI GTCTC 4 cut(s) 160, 189, 667, 931
BstMCI CGRYCG 1 cut(s) 860
BstMWI GCNNNNNNNGC 7 cut(s) 413, 417, 684, 902, 1034, 1152, 1310
BstNI CCWGG 1 cut(s) 317
BstNSI RCATGY 1 cut(s) 721
BstSCI CCNGG 1 cut(s) 315
BstV1I GCAGC 4 cut(s) 687, 757, 1021, 1158
BstV2I GAAGAC 1 cut(s) 318
BstX2I RGATCY 2 cut(s) 298, 1013
BstYI RGATCY 2 cut(s) 298, 1013
BsuRI GGCC 6 cut(s) 97, 203, 411, 435, 612, 1082
BtsCI GGATG 3 cut(s) 595, 1174, 1228
BtsIMutI CAGTG 1 cut(s) 1268
BveI ACCTGC 1 cut(s) 461
Cac8I GCNNGC 7 cut(s) 129, 409, 418, 468, 579, 1026, 1338
CciI TCATGA 1 cut(s) 478
CfoI GCGC 1 cut(s) 896
Cfr13I GGNCC 1 cut(s) 433
CseI GACGC 1 cut(s) 1026
CsiI ACCWGGT 1 cut(s) 315
Csp6I GTAC 2 cut(s) 759, 1088
CviAII CATG 9 cut(s) 165, 308, 341, 479, 527, 718, 923, 1249, 1333
CviQI GTAC 2 cut(s) 759, 1088
DdeI CTNAG 2 cut(s) 99, 837
EaeI YGGCCR 1 cut(s) 201
Eam1104I CTCTTC 1 cut(s) 940
EarI CTCTTC 1 cut(s) 940
Ecl136II GAGCTC 2 cut(s) 577, 731
Eco130I CCWWGG 1 cut(s) 1315
Eco147I AGGCCT 1 cut(s) 97
Eco24I GRGCYC 3 cut(s) 579, 733, 1241
Eco31I GGTCTC 1 cut(s) 667
Eco53kI GAGCTC 2 cut(s) 577, 731
Eco57I CTGAAG 1 cut(s) 470
EcoICRI GAGCTC 2 cut(s) 577, 731
EcoRI GAATTC 1 cut(s) 531
EcoRII CCWGG 1 cut(s) 315
EcoT14I CCWWGG 1 cut(s) 1315
EcoT22I ATGCAT 1 cut(s) 528
EcoT38I GRGCYC 3 cut(s) 579, 733, 1241
ErhI CCWWGG 1 cut(s) 1315
FaeI CATG 9 cut(s) 168, 311, 344, 482, 530, 721, 926, 1252, 1336
FalI AAGNNNNNCTT 1 cut(s) 29
FatI CATG 9 cut(s) 164, 307, 340, 478, 526, 717, 922, 1248, 1332
FauNDI CATATG 1 cut(s) 1285
FbaI TGATCA 1 cut(s) 1135
Fnu4HI GCNGC 5 cut(s) 610, 676, 771, 1035, 1147
FokI GGATG 3 cut(s) 602, 1161, 1235
FriOI GRGCYC 3 cut(s) 579, 733, 1241
Fsp4HI GCNGC 5 cut(s) 610, 676, 771, 1035, 1147
FspBI CTAG 5 cut(s) 519, 707, 897, 1290, 1316
GlaI GCGC 1 cut(s) 895
GluI GCNGC 5 cut(s) 610, 676, 771, 1035, 1147
GsuI CTGGAG 2 cut(s) 59, 471
HaeII RGCGCY 1 cut(s) 897
HaeIII GGCC 6 cut(s) 97, 203, 411, 435, 612, 1082
HgaI GACGC 1 cut(s) 1026
HhaI GCGC 1 cut(s) 896
Hin1II CATG 9 cut(s) 168, 311, 344, 482, 530, 721, 926, 1252, 1336
Hin6I GCGC 1 cut(s) 894
HinP1I GCGC 1 cut(s) 894
HincII GTYRAC 2 cut(s) 229, 885
HindII GTYRAC 2 cut(s) 229, 885
HindIII AAGCTT 1 cut(s) 953
HinfI GANTC 5 cut(s) 186, 356, 791, 803, 815
HphI GGTGA 5 cut(s) 292, 343, 789, 798, 823
Hpy166II GTNNAC 5 cut(s) 229, 283, 322, 885, 1329
Hpy188III TCNNGA 6 cut(s) 44, 450, 479, 726, 1268, 1274
Hpy8I GTNNAC 5 cut(s) 229, 283, 322, 885, 1329
HpyAV CCTTC 5 cut(s) 264, 268, 505, 652, 819
HpyCH4III ACNGT 1 cut(s) 1326
HpyCH4IV ACGT 2 cut(s) 291, 398
HpyCH4V TGCA 9 cut(s) 407, 526, 554, 619, 692, 773, 1124, 1304, 1336
HpyF10VI GCNNNNNNNGC 7 cut(s) 413, 417, 684, 902, 1034, 1152, 1310
HpyF3I CTNAG 2 cut(s) 99, 837
HpySE526I ACGT 2 cut(s) 291, 398
Hsp92II CATG 9 cut(s) 168, 311, 344, 482, 530, 721, 926, 1252, 1336
HspAI GCGC 1 cut(s) 894
Ksp22I TGATCA 1 cut(s) 1135
LmnI GCTCC 5 cut(s) 29, 78, 728, 1213, 1244
Lsp1109I GCAGC 4 cut(s) 687, 757, 1021, 1158
LweI GCATC 3 cut(s) 628, 914, 1021
MabI ACCWGGT 1 cut(s) 315
MaeI CTAG 5 cut(s) 519, 707, 897, 1290, 1316
MaeII ACGT 2 cut(s) 291, 398
MaeIII GTNAC 2 cut(s) 349, 1320
MbiI CCGCTC 1 cut(s) 981
MboII GAAGA 8 cut(s) 17, 112, 308, 323, 614, 957, 1008, 1240
MflI RGATCY 2 cut(s) 298, 1013
MhlI GDGCHC 4 cut(s) 478, 579, 733, 1241
MlsI TGGCCA 1 cut(s) 203
MluCI AATT 8 cut(s) 9, 34, 232, 245, 531, 826, 911, 1073
MluNI TGGCCA 1 cut(s) 203
MlyI GAGTC 4 cut(s) 350, 785, 797, 809
Mox20I TGGCCA 1 cut(s) 203
Mph1103I ATGCAT 1 cut(s) 528
MroXI GAANNNNTTC 1 cut(s) 9
MscI TGGCCA 1 cut(s) 203
MseI TTAA 4 cut(s) 389, 917, 957, 1170
MslI CAYNNNNRTG 1 cut(s) 345
Msp20I TGGCCA 1 cut(s) 203
MspA1I CMGCKG 1 cut(s) 678
MspR9I CCNGG 1 cut(s) 317
Mva1269I GAATGC 2 cut(s) 528, 1306
MvaI CCWGG 1 cut(s) 317
MwoI GCNNNNNNNGC 7 cut(s) 413, 417, 684, 902, 1034, 1152, 1310
NdeI CATATG 1 cut(s) 1285
NlaIII CATG 9 cut(s) 168, 311, 344, 482, 530, 721, 926, 1252, 1336
NlaIV GGNNCC 3 cut(s) 74, 990, 1240
NmuCI GTSAC 1 cut(s) 349
NsiI ATGCAT 1 cut(s) 528
NspI RCATGY 1 cut(s) 721
PagI TCATGA 1 cut(s) 478
PaqCI CACCTGC 1 cut(s) 461
PceI AGGCCT 1 cut(s) 97
PctI GAATGC 2 cut(s) 528, 1306
PdmI GAANNNNTTC 1 cut(s) 9
PfeI GAWTC 1 cut(s) 186
PflFI GACNNNGTC 1 cut(s) 152
PflMI CCANNNNNTGG 1 cut(s) 248
PkrI GCNGC 5 cut(s) 611, 677, 772, 1036, 1148
Ple19I CGATCG 1 cut(s) 860
PleI GAGTC 4 cut(s) 350, 785, 797, 809
PpsI GAGTC 4 cut(s) 350, 785, 797, 809
PsiI TTATAA 1 cut(s) 1191
Psp124BI GAGCTC 2 cut(s) 579, 733
Psp6I CCWGG 1 cut(s) 315
PspGI CCWGG 1 cut(s) 315
PspN4I GGNNCC 3 cut(s) 74, 990, 1240
PspPI GGNCC 1 cut(s) 433
PsuI RGATCY 2 cut(s) 298, 1013
PsyI GACNNNGTC 1 cut(s) 152
PvuI CGATCG 1 cut(s) 860
PvuII CAGCTG 1 cut(s) 678
RsaI GTAC 2 cut(s) 760, 1089
RsaNI GTAC 2 cut(s) 759, 1088
RseI CAYNNNNRTG 1 cut(s) 345
SacI GAGCTC 2 cut(s) 579, 733
SaqAI TTAA 4 cut(s) 389, 917, 957, 1170
SatI GCNGC 5 cut(s) 610, 676, 771, 1035, 1147
Sau96I GGNCC 1 cut(s) 433
SchI GAGTC 4 cut(s) 350, 785, 797, 809
ScrFI CCNGG 1 cut(s) 317
SduI GDGCHC 4 cut(s) 478, 579, 733, 1241
SexAI ACCWGGT 1 cut(s) 315
SfaNI GCATC 3 cut(s) 628, 914, 1021
SmiMI CAYNNNNRTG 1 cut(s) 345
SmlI CTYRAG 2 cut(s) 19, 572
SmoI CTYRAG 2 cut(s) 19, 572
Sse9I AATT 8 cut(s) 9, 34, 232, 245, 531, 826, 911, 1073
SseBI AGGCCT 1 cut(s) 97
SsiI CCGC 2 cut(s) 609, 979
SspMI CTAG 5 cut(s) 519, 707, 897, 1290, 1316
SstI GAGCTC 2 cut(s) 579, 733
StuI AGGCCT 1 cut(s) 97
StyD4I CCNGG 1 cut(s) 315
StyI CCWWGG 1 cut(s) 1315
TaaI ACNGT 1 cut(s) 1326
TaiI ACGT 2 cut(s) 294, 401
TaqI TCGA 4 cut(s) 626, 856, 860, 1001
TasI AATT 8 cut(s) 9, 34, 232, 245, 531, 826, 911, 1073
TatI WGTACW 2 cut(s) 758, 1087
TauI GCSGC 1 cut(s) 612
TfiI GAWTC 1 cut(s) 186
Tru1I TTAA 4 cut(s) 389, 917, 957, 1170
Tru9I TTAA 4 cut(s) 389, 917, 957, 1170
TscAI CASTG 1 cut(s) 1268
TseFI GTSAC 1 cut(s) 349
TseI GCWGC 4 cut(s) 675, 770, 1034, 1146
Tsp45I GTSAC 1 cut(s) 349
TspDTI ATGAA 4 cut(s) 70, 324, 689, 1313
TspRI CASTG 1 cut(s) 1268
Tth111I GACNNNGTC 1 cut(s) 152
Van91I CCANNNNNTGG 1 cut(s) 248
XapI RAATTY 4 cut(s) 9, 34, 245, 531
XceI RCATGY 1 cut(s) 721
XmaJI CCTAGG 1 cut(s) 1315
XmnI GAANNNNTTC 1 cut(s) 9
XspI CTAG 5 cut(s) 519, 707, 897, 1290, 1316
Zsp2I ATGCAT 1 cut(s) 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.