pycom06g11120
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0000212
Physical Location & Seq
Forward (+)
16375993 .. 16377419
1427 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g11120.2

Sequence Viewer

Length: 1152 bp
ATGGAGGAAATTATATCCTCTTGTACTTCTCAAAAGTTTTGTCAAGAAAACTCACCCACACTTCAACGCCTCCAATTCATAGTTCAGAACCGCCCTGAATGGTGGGTCTATTCAATTTTCTGGCAACCCTCAAAACACAACAGTGACCTAGTTTCTTTGTCGTGGGCCGGCGGCCATTTTCGAAGCACTAGGGACTTGGCCTCCAAAAGAAGTTACCACAAACACCAACCCGGATTCGGGTTCAATGTTGTGGAGAGGAAGAGGGCGATTAGCAGAGAAGTTGAAGCTCTTTTCCATGAAGACTTGGATTTGGACGGTGGAGATGTTACTGACGCTCAATGGTTTTACTTTTACACAGCCTCTTTAACCCAGTCATTTACTGCCGGCCACGGTAATAGTAACATTCTGGGCCGTACGTTTTGTTCTGGTGGTTTTGTTTGGCTGGCAGGTGATCATGAGCTTCAAATCTATGAGTGTGAGAGAGTGAAAGAAGCAAGAATGCACGGAATTCAAACTTTGGTTTGTATTGCAACTTCATGTGGAGTACTTGAACTCGCATCTTTGGATGTGATCAAAGAAGATTGGGGTCTTCTGCAGCTATCAAAATCACTTTTCGAATCAGACAACAAGAACGTGGTCCCAAAGCAGCTGAGCAGCAGCCGTGAGGACCAGGTACATGTTTCTCTCTTAGAAAGTGGAATCTTTTCAGGAGCTGACAAAGAGTGGGCAACACAAGGTGGTACAAAAGAAGCAGCTCCTGCAAATGTAAGTGGATCATCATCAGATTCAGGACCTTCTGACTCTGTTGGAAATTTAACCTCTGAGAATGCTGAGAACATTCGATTAAAAAAGAGAGGACGATCATCAAACCGTGAAACAGGTAGAACAGAATCACCAATAAACCATGTTGAGGCTGAAAGACAGAGGCGAGAGAAGCTTAACCATCGATTCTATGCCCTCCGCTCTGTCGTTCCCAATGTGTCCAGAATGGACAAAGCTTCTTTACTTTCTGATGCAGTTGTATACATCAATGATCTGAAAGCAAGGGTTGGGCAATTGGAGGCCAAAATTCAAGCACAACCTCAAAAGCCTGGTGTTGATATCGGAGGCCAAACAAGCTCCATAGTTGATCGATCATCAAACAAGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

384

Amino Acids

42.64

Weight (kDa)

6.61

Isoelectric Point (pI)

52.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 437
Acc36I ACCTGC 1 cut(s) 437
AccBSI CCGCTC 1 cut(s) 963
AccI GTMKAC 1 cut(s) 1023
AciI CCGC 3 cut(s) 91, 171, 961
AclWI GGATC 1 cut(s) 781
AcoI YGGCCR 2 cut(s) 172, 385
AcsI RAATTY 3 cut(s) 507, 811, 1068
AdeI CACNNNGTG 1 cut(s) 737
AfaI GTAC 5 cut(s) 25, 415, 546, 675, 742
AfiI CCNNNNNNNGG 3 cut(s) 236, 237, 910
AflIII ACRYGT 1 cut(s) 676
AgsI TTSAA 8 cut(s) 65, 114, 244, 284, 464, 512, 551, 1073
AjnI CCWGG 2 cut(s) 669, 1090
AjuI GAANNNNNNNTTGG 2 cut(s) 66, 98
AleI CACNNNNGTG 1 cut(s) 141
AluBI AGCT 9 cut(s) 287, 460, 598, 649, 713, 755, 937, 998, 1119
AluI AGCT 9 cut(s) 287, 460, 598, 649, 713, 755, 937, 998, 1119
AlwI GGATC 1 cut(s) 781
AlwNI CAGNNNCTG 2 cut(s) 713, 758
AoxI GGCC 8 cut(s) 165, 172, 198, 385, 409, 1062, 1108, 1146
ApeKI GCWGC 5 cut(s) 595, 646, 654, 657, 752
ApoI RAATTY 3 cut(s) 507, 811, 1068
ArsI GACNNNNNNTTYG 2 cut(s) 25, 57
Asp700I GAANNNNTTC 1 cut(s) 703
AspS9I GGNCC 5 cut(s) 165, 409, 637, 667, 791
AsuC2I CCSGG 1 cut(s) 231
AsuHPI GGTGA 3 cut(s) 45, 461, 885
AsuII TTCGAA 2 cut(s) 181, 615
AvaII GGWCC 3 cut(s) 637, 667, 791
BarI GAAGNNNNNNTAC 2 cut(s) 517, 549
BbsI GAAGAC 2 cut(s) 306, 581
BbvI GCAGC 5 cut(s) 607, 658, 666, 669, 764
BccI CCATC 1 cut(s) 951
BceAI ACGGC 2 cut(s) 396, 645
BciT130I CCWGG 2 cut(s) 671, 1092
BclI TGATCA 2 cut(s) 451, 570
BcnI CCSGG 1 cut(s) 231
BfaI CTAG 3 cut(s) 149, 189, 1150
BfmI CTRYAG 1 cut(s) 593
BfuAI ACCTGC 1 cut(s) 437
BisI GCNGC 6 cut(s) 172, 596, 647, 655, 658, 753
BlpI GCTNAGC 1 cut(s) 650
BlsI GCNGC 6 cut(s) 173, 597, 648, 656, 659, 754
BmcAI AGTACT 1 cut(s) 546
Bme1390I CCNGG 3 cut(s) 231, 671, 1092
Bme18I GGWCC 3 cut(s) 637, 667, 791
BmgT120I GGNCC 5 cut(s) 165, 409, 637, 667, 791
BmiI GGNNCC 1 cut(s) 639
BmrFI CCNGG 3 cut(s) 231, 671, 1092
BmrI ACTGGG 1 cut(s) 364
BmsI GCATC 2 cut(s) 566, 1003
BmuI ACTGGG 1 cut(s) 364
BpiI GAAGAC 2 cut(s) 306, 581
Bpu1102I GCTNAGC 1 cut(s) 650
Bpu14I TTCGAA 2 cut(s) 181, 615
BpuMI CCSGG 1 cut(s) 231
Bsa29I ATCGAT 2 cut(s) 946, 1132
BsaBI GATNNNNATC 1 cut(s) 778
BsaJI CCNNGG 1 cut(s) 388
BsaXI ACNNNNNCTCC 2 cut(s) 185, 215
Bsc4I CCNNNNNNNGG 3 cut(s) 236, 237, 910
Bse118I RCCGGY 2 cut(s) 167, 383
Bse1I ACTGG 1 cut(s) 370
Bse8I GATNNNNATC 1 cut(s) 778
BseBI CCWGG 2 cut(s) 671, 1092
BseCI ATCGAT 2 cut(s) 946, 1132
BseDI CCNNGG 1 cut(s) 388
BseGI GGATG 1 cut(s) 571
BseJI GATNNNNATC 1 cut(s) 778
BseLI CCNNNNNNNGG 3 cut(s) 236, 237, 910
BseMII CTCAG 3 cut(s) 641, 813, 822
BseNI ACTGG 1 cut(s) 370
BseXI GCAGC 5 cut(s) 607, 658, 666, 669, 764
BshFI GGCC 8 cut(s) 167, 174, 200, 387, 411, 1064, 1110, 1148
BshVI ATCGAT 2 cut(s) 946, 1132
BsiSI CCGG 3 cut(s) 168, 231, 384
BsiWI CGTACG 1 cut(s) 413
BslFI GGGAC 2 cut(s) 206, 623
BslI CCNNNNNNNGG 3 cut(s) 236, 237, 910
BsmFI GGGAC 2 cut(s) 206, 623
BsmI GAATGC 2 cut(s) 504, 832
BsnI GGCC 8 cut(s) 167, 174, 200, 387, 411, 1064, 1110, 1148
Bsp119I TTCGAA 2 cut(s) 181, 615
Bsp143I GATC 7 cut(s) 451, 570, 773, 860, 1033, 1129, 1133
Bsp1720I GCTNAGC 1 cut(s) 650
BspACI CCGC 3 cut(s) 91, 171, 961
BspANI GGCC 8 cut(s) 167, 174, 200, 387, 411, 1064, 1110, 1148
BspCNI CTCAG 3 cut(s) 642, 814, 823
BspDI ATCGAT 2 cut(s) 946, 1132
BspHI TCATGA 1 cut(s) 454
BspLI GGNNCC 1 cut(s) 639
BspMAI CTGCAG 1 cut(s) 597
BspMI ACCTGC 1 cut(s) 437
BspPI GGATC 1 cut(s) 781
BspT104I TTCGAA 2 cut(s) 181, 615
BsrBI CCGCTC 1 cut(s) 963
BsrFI RCCGGY 2 cut(s) 167, 383
BsrI ACTGG 1 cut(s) 370
BssAI RCCGGY 2 cut(s) 167, 383
BssECI CCNNGG 1 cut(s) 388
BssMI GATC 7 cut(s) 451, 570, 773, 860, 1033, 1129, 1133
BssNAI GTATAC 1 cut(s) 1024
Bst1107I GTATAC 1 cut(s) 1024
Bst2UI CCWGG 2 cut(s) 671, 1092
Bst4CI ACNGT 4 cut(s) 143, 317, 392, 872
Bst6I CTCTTC 1 cut(s) 254
BstAPI GCANNNNNTGC 1 cut(s) 758
BstBI TTCGAA 2 cut(s) 181, 615
BstC8I GCNNGC 3 cut(s) 169, 385, 444
BstDEI CTNAG 4 cut(s) 650, 688, 822, 831
BstDSI CCRYGG 1 cut(s) 388
BstF5I GGATG 1 cut(s) 571
BstKTI GATC 7 cut(s) 454, 573, 776, 863, 1036, 1132, 1136
BstMBI GATC 7 cut(s) 451, 570, 773, 860, 1033, 1129, 1133
BstMWI GCNNNNNNNGC 3 cut(s) 758, 934, 1116
BstNI CCWGG 2 cut(s) 671, 1092
BstNSI RCATGY 1 cut(s) 680
BstSCI CCNGG 3 cut(s) 229, 669, 1090
BstSFI CTRYAG 1 cut(s) 593
BstV1I GCAGC 5 cut(s) 607, 658, 666, 669, 764
BstV2I GAAGAC 2 cut(s) 306, 581
BstZ17I GTATAC 1 cut(s) 1024
Bsu15I ATCGAT 2 cut(s) 946, 1132
BsuRI GGCC 8 cut(s) 167, 174, 200, 387, 411, 1064, 1110, 1148
BsuTUI ATCGAT 2 cut(s) 946, 1132
BtgI CCRYGG 1 cut(s) 388
BtsCI GGATG 1 cut(s) 571
BtsIMutI CAGTG 1 cut(s) 148
BveI ACCTGC 1 cut(s) 437
Cac8I GCNNGC 3 cut(s) 169, 385, 444
CaiI CAGNNNCTG 2 cut(s) 713, 758
CciI TCATGA 1 cut(s) 454
Cfr10I RCCGGY 2 cut(s) 167, 383
Cfr13I GGNCC 5 cut(s) 165, 409, 637, 667, 791
ClaI ATCGAT 2 cut(s) 946, 1132
CseI GACGC 1 cut(s) 341
CsiI ACCWGGT 1 cut(s) 669
Csp6I GTAC 5 cut(s) 24, 414, 545, 674, 741
CviAII CATG 5 cut(s) 296, 455, 537, 677, 905
CviQI GTAC 5 cut(s) 24, 414, 545, 674, 741
DdeI CTNAG 4 cut(s) 650, 688, 822, 831
DpnI GATC 7 cut(s) 453, 572, 775, 862, 1035, 1131, 1135
DpnII GATC 7 cut(s) 451, 570, 773, 860, 1033, 1129, 1133
DraIII CACNNNGTG 1 cut(s) 737
EaeI YGGCCR 2 cut(s) 172, 385
Eam1104I CTCTTC 1 cut(s) 254
EarI CTCTTC 1 cut(s) 254
Eco147I AGGCCT 1 cut(s) 1148
Eco32I GATATC 1 cut(s) 1102
Eco47I GGWCC 3 cut(s) 637, 667, 791
EcoO109I RGGNCCY 1 cut(s) 791
EcoRI GAATTC 1 cut(s) 507
EcoRII CCWGG 2 cut(s) 669, 1090
EcoRV GATATC 1 cut(s) 1102
FaeI CATG 5 cut(s) 299, 458, 540, 680, 908
FaqI GGGAC 2 cut(s) 206, 623
FatI CATG 5 cut(s) 295, 454, 536, 676, 904
FbaI TGATCA 2 cut(s) 451, 570
FblI GTMKAC 1 cut(s) 1023
Fnu4HI GCNGC 6 cut(s) 172, 596, 647, 655, 658, 753
FokI GGATG 1 cut(s) 578
Fsp4HI GCNGC 6 cut(s) 172, 596, 647, 655, 658, 753
FspBI CTAG 3 cut(s) 149, 189, 1150
GluI GCNGC 6 cut(s) 172, 596, 647, 655, 658, 753
HaeIII GGCC 8 cut(s) 167, 174, 200, 387, 411, 1064, 1110, 1148
HapII CCGG 3 cut(s) 168, 231, 384
HgaI GACGC 1 cut(s) 341
Hin1II CATG 5 cut(s) 299, 458, 540, 680, 908
HindIII AAGCTT 2 cut(s) 935, 996
HinfI GANTC 7 cut(s) 234, 617, 699, 785, 800, 890, 948
HpaII CCGG 3 cut(s) 168, 231, 384
HphI GGTGA 3 cut(s) 45, 461, 885
Hpy166II GTNNAC 1 cut(s) 1024
Hpy188I TCNGA 8 cut(s) 87, 622, 784, 799, 823, 1012, 1038, 1106
Hpy188III TCNNGA 5 cut(s) 44, 455, 708, 789, 984
Hpy8I GTNNAC 1 cut(s) 1024
HpyAV CCTTC 1 cut(s) 804
HpyCH4III ACNGT 4 cut(s) 143, 317, 392, 872
HpyCH4IV ACGT 2 cut(s) 416, 633
HpyCH4V TGCA 5 cut(s) 502, 530, 595, 761, 1016
HpyF10VI GCNNNNNNNGC 3 cut(s) 758, 934, 1116
HpyF3I CTNAG 4 cut(s) 650, 688, 822, 831
HpySE526I ACGT 2 cut(s) 416, 633
Hsp92II CATG 5 cut(s) 299, 458, 540, 680, 908
KroI GCCGGC 2 cut(s) 167, 383
KroNI GCCGGC 2 cut(s) 169, 385
Ksp22I TGATCA 2 cut(s) 451, 570
Kzo9I GATC 7 cut(s) 451, 570, 773, 860, 1033, 1129, 1133
LmnI GCTCC 3 cut(s) 710, 760, 1124
Lsp1109I GCAGC 5 cut(s) 607, 658, 666, 669, 764
LweI GCATC 2 cut(s) 566, 1003
MabI ACCWGGT 1 cut(s) 669
MaeI CTAG 3 cut(s) 149, 189, 1150
MaeII ACGT 2 cut(s) 416, 633
MaeIII GTNAC 4 cut(s) 143, 212, 325, 398
MalI GATC 7 cut(s) 453, 572, 775, 862, 1035, 1131, 1135
MbiI CCGCTC 1 cut(s) 963
MboI GATC 7 cut(s) 451, 570, 773, 860, 1033, 1129, 1133
MboII GAAGA 4 cut(s) 271, 311, 581, 590
MfeI CAATTG 1 cut(s) 1055
MluCI AATT 7 cut(s) 9, 74, 114, 507, 811, 1055, 1068
MlyI GAGTC 1 cut(s) 794
MmeI TCCRAC 1 cut(s) 787
MroNI GCCGGC 2 cut(s) 167, 383
MroXI GAANNNNTTC 1 cut(s) 703
MseI TTAA 4 cut(s) 365, 815, 845, 939
MslI CAYNNNNRTG 1 cut(s) 141
MspA1I CMGCKG 1 cut(s) 649
MspI CCGG 3 cut(s) 168, 231, 384
MspR9I CCNGG 3 cut(s) 231, 671, 1092
MunI CAATTG 1 cut(s) 1055
Mva1269I GAATGC 2 cut(s) 504, 832
MvaI CCWGG 2 cut(s) 671, 1092
MwoI GCNNNNNNNGC 3 cut(s) 758, 934, 1116
NaeI GCCGGC 2 cut(s) 169, 385
NciI CCSGG 1 cut(s) 231
NdeII GATC 7 cut(s) 451, 570, 773, 860, 1033, 1129, 1133
NgoMIV GCCGGC 2 cut(s) 167, 383
NlaIII CATG 5 cut(s) 299, 458, 540, 680, 908
NlaIV GGNNCC 1 cut(s) 639
NmuCI GTSAC 1 cut(s) 143
NspI RCATGY 1 cut(s) 680
NspV TTCGAA 2 cut(s) 181, 615
OliI CACNNNNGTG 1 cut(s) 141
PagI TCATGA 1 cut(s) 454
PaqCI CACCTGC 1 cut(s) 437
PceI AGGCCT 1 cut(s) 1148
PciI ACATGT 1 cut(s) 676
PctI GAATGC 2 cut(s) 504, 832
PdiI GCCGGC 2 cut(s) 169, 385
PdmI GAANNNNTTC 1 cut(s) 703
PfeI GAWTC 6 cut(s) 234, 617, 699, 785, 890, 948
Pfl23II CGTACG 1 cut(s) 413
PkrI GCNGC 6 cut(s) 173, 597, 648, 656, 659, 754
PleI GAGTC 1 cut(s) 794
PpsI GAGTC 1 cut(s) 794
PpuMI RGGWCCY 1 cut(s) 791
PscI ACATGT 1 cut(s) 676
Psp5II RGGWCCY 1 cut(s) 791
Psp6I CCWGG 2 cut(s) 669, 1090
PspGI CCWGG 2 cut(s) 669, 1090
PspLI CGTACG 1 cut(s) 413
PspN4I GGNNCC 1 cut(s) 639
PspPI GGNCC 5 cut(s) 165, 409, 637, 667, 791
PspPPI RGGWCCY 1 cut(s) 791
PsrI GAACNNNNNNTAC 2 cut(s) 406, 438
PstI CTGCAG 1 cut(s) 597
PstNI CAGNNNCTG 2 cut(s) 713, 758
PvuII CAGCTG 1 cut(s) 649
RsaI GTAC 5 cut(s) 25, 415, 546, 675, 742
RsaNI GTAC 5 cut(s) 24, 414, 545, 674, 741
RseI CAYNNNNRTG 1 cut(s) 141
SaqAI TTAA 4 cut(s) 365, 815, 845, 939
SatI GCNGC 6 cut(s) 172, 596, 647, 655, 658, 753
Sau3AI GATC 7 cut(s) 451, 570, 773, 860, 1033, 1129, 1133
Sau96I GGNCC 5 cut(s) 165, 409, 637, 667, 791
ScaI AGTACT 1 cut(s) 546
SchI GAGTC 1 cut(s) 794
ScrFI CCNGG 3 cut(s) 231, 671, 1092
SexAI ACCWGGT 1 cut(s) 669
SfaNI GCATC 2 cut(s) 566, 1003
SfcI CTRYAG 1 cut(s) 593
SfuI TTCGAA 2 cut(s) 181, 615
SinI GGWCC 3 cut(s) 637, 667, 791
SmiMI CAYNNNNRTG 1 cut(s) 141
Sse9I AATT 7 cut(s) 9, 74, 114, 507, 811, 1055, 1068
SseBI AGGCCT 1 cut(s) 1148
SsiI CCGC 3 cut(s) 91, 171, 961
SspMI CTAG 3 cut(s) 149, 189, 1150
StuI AGGCCT 1 cut(s) 1148
StyD4I CCNGG 3 cut(s) 229, 669, 1090
TaaI ACNGT 4 cut(s) 143, 317, 392, 872
TaiI ACGT 2 cut(s) 419, 636
TaqI TCGA 5 cut(s) 181, 615, 841, 946, 1132
TasI AATT 7 cut(s) 9, 74, 114, 507, 811, 1055, 1068
TatI WGTACW 2 cut(s) 23, 544
TauI GCSGC 1 cut(s) 174
TfiI GAWTC 6 cut(s) 234, 617, 699, 785, 890, 948
Tru1I TTAA 4 cut(s) 365, 815, 845, 939
Tru9I TTAA 4 cut(s) 365, 815, 845, 939
TscAI CASTG 1 cut(s) 148
TseFI GTSAC 1 cut(s) 143
TseI GCWGC 5 cut(s) 595, 646, 654, 657, 752
Tsp45I GTSAC 1 cut(s) 143
TspDTI ATGAA 3 cut(s) 67, 312, 525
TspGWI ACGGA 1 cut(s) 519
TspRI CASTG 1 cut(s) 148
VpaK11BI GGWCC 3 cut(s) 637, 667, 791
XapI RAATTY 3 cut(s) 507, 811, 1068
XceI RCATGY 1 cut(s) 680
XmiI GTMKAC 1 cut(s) 1023
XmnI GAANNNNTTC 1 cut(s) 703
XspI CTAG 3 cut(s) 149, 189, 1150
ZrmI AGTACT 1 cut(s) 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.