Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002532.1

Orthogroup ID

OG0000212

Physical Location & Seq

Genomic Coordinates Reverse (-)

267599 .. 269460

Gene Structure 1862 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002532.1_g000058.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 699 bp

atggtagtggcgtcaccaaggagaatagttgtccctaacgcgcccttaaagcacctcgatcaagggagcctgaccataatgatgcttgtctttggtgtggagcgtccggacattgggccaaagcatgcaaagcatcctagaatgttgcaaatgcgtacaagatgcaaggccttctgcttcgggacctcaatctggctgagcggggcccacgaatttcagttcaacaactgcgagagagccaaagaggcccaaatccacgagatcgagaccttgatctgcatcccaacttccgacggtgttcttgaaatgggttcgtctggtttgatcagagagaactgggggttgatccagcaagccaagtcgttgttcgggtcggatcagcccaacccggaaacaagaccgcttgagttcatcaatcggaacttctccatttttgacatcggcatcattgccggcgtgcaggaagaggatcacagctcgtacaatgacaacaagaaacatgtttttggttttagcaagaagaagaacggagctccgaacccaaacccggacttcgcagattccgactgccaaatgaaaagagcgccgaagaaaaggggccggaaacccgggctaggccaagacacgccgctcaaccacgtggaggaggagcggcagcggcgggagaagctcacctcgcaagggcagcgttggaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0009892 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

232

Amino Acids

26.29

Weight (kDa)

9.26

Isoelectric Point (pI)

37.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00870
fragaria_vesca	FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica	MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica	Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis	pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis	RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata	RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora	Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii	Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa	Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha	Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana	Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	3 cut(s)	201, 631, 652
AccII	CGCG	1 cut(s)	41
AccIII	TCCGGA	1 cut(s)	106
AciI	CCGC	6 cut(s)	201, 401, 629, 652, 658, 661
AclWI	GGATC	3 cut(s)	340, 384, 477
AcsI	RAATTY	1 cut(s)	212
AcvI	CACGTG	1 cut(s)	640
AcyI	GRCGYC	1 cut(s)	11
AfaI	GTAC	2 cut(s)	157, 482
AfiI	CCNNNNNNNGG	6 cut(s)	113, 192, 547, 614, 643, 681
AflIII	ACRYGT	1 cut(s)	499
AgsI	TTSAA	2 cut(s)	223, 305
AjuI	GAANNNNNNNTTGG	2 cut(s)	350, 382
AluBI	AGCT	3 cut(s)	477, 533, 670
AluI	AGCT	3 cut(s)	477, 533, 670
Alw21I	GWGCWC	1 cut(s)	535
Alw26I	GTCTC	1 cut(s)	260
AlwI	GGATC	3 cut(s)	340, 384, 477
Ama87I	CYCGRG	1 cut(s)	608
Aor13HI	TCCGGA	1 cut(s)	106
AoxI	GGCC	6 cut(s)	116, 168, 204, 246, 598, 616
ApaI	GGGCCC	1 cut(s)	208
ApeKI	GCWGC	2 cut(s)	655, 685
ApoI	RAATTY	1 cut(s)	212
AspLEI	GCGC	2 cut(s)	43, 586
AspS9I	GGNCC	6 cut(s)	116, 183, 204, 205, 247, 598
AsuC2I	CCSGG	4 cut(s)	389, 548, 609, 610
AsuHPI	GGTGA	2 cut(s)	6, 664
AvaI	CYCGRG	1 cut(s)	608
AvaII	GGWCC	1 cut(s)	183
BaeGI	GKGCMC	1 cut(s)	208
BanII	GRGCYC	2 cut(s)	208, 535
BauI	CACGAG	1 cut(s)	257
BbrPI	CACGTG	1 cut(s)	640
Bbv12I	GWGCWC	1 cut(s)	535
BbvI	GCAGC	1 cut(s)	667
BclI	TGATCA	1 cut(s)	324
BcnI	CCSGG	4 cut(s)	389, 548, 609, 610
BcoDI	GTCTC	1 cut(s)	260
BfaI	CTAG	2 cut(s)	138, 614
BfoI	RGCGCY	1 cut(s)	587
BglI	GCCNNNNNGGC	1 cut(s)	245
BisI	GCNGC	5 cut(s)	629, 653, 656, 659, 686
BlpI	GCTNAGC	1 cut(s)	197
BlsI	GCNGC	5 cut(s)	630, 654, 657, 660, 687
Bme1390I	CCNGG	4 cut(s)	389, 548, 609, 610
Bme18I	GGWCC	1 cut(s)	183
BmeT110I	CYCGRG	1 cut(s)	608
BmgT120I	GGNCC	6 cut(s)	116, 183, 204, 205, 247, 598
BmiI	GGNNCC	5 cut(s)	68, 184, 205, 206, 599
BmrFI	CCNGG	4 cut(s)	389, 548, 609, 610
BmrI	ACTGGG	1 cut(s)	346
BmsI	GCATC	5 cut(s)	72, 142, 152, 288, 453
BmuI	ACTGGG	1 cut(s)	346
Bpu1102I	GCTNAGC	1 cut(s)	197
BpuEI	CTTGAG	1 cut(s)	425
BpuMI	CCSGG	4 cut(s)	389, 548, 609, 610
BsaAI	YACGTR	1 cut(s)	640
BsaBI	GATNNNNATC	1 cut(s)	278
BsaHI	GRCGYC	1 cut(s)	11
BsaI	GGTCTC	1 cut(s)	260
BsaJI	CCNNGG	2 cut(s)	17, 608
BsaWI	WCCGGW	1 cut(s)	106
Bsc4I	CCNNNNNNNGG	6 cut(s)	113, 192, 547, 614, 643, 681
Bse118I	RCCGGY	1 cut(s)	452
Bse1I	ACTGG	1 cut(s)	341
Bse3DI	GCAATG	1 cut(s)	447
Bse8I	GATNNNNATC	1 cut(s)	278
BseAI	TCCGGA	1 cut(s)	106
BseDI	CCNNGG	2 cut(s)	17, 608
BseGI	GGATG	2 cut(s)	133, 279
BseJI	GATNNNNATC	1 cut(s)	278
BseLI	CCNNNNNNNGG	6 cut(s)	113, 192, 547, 614, 643, 681
BseMI	GCAATG	1 cut(s)	447
BseMII	CTCAG	1 cut(s)	188
BseNI	ACTGG	1 cut(s)	341
BseRI	GAGGAG	2 cut(s)	659, 662
BseSI	GKGCMC	1 cut(s)	208
BseXI	GCAGC	1 cut(s)	667
BsgI	GTGCAG	1 cut(s)	479
Bsh1236I	CGCG	1 cut(s)	41
BshFI	GGCC	6 cut(s)	118, 170, 206, 248, 600, 618
BsiHKAI	GWGCWC	1 cut(s)	535
BsiHKCI	CYCGRG	1 cut(s)	608
BsiSI	CCGG	6 cut(s)	107, 389, 453, 548, 601, 609
BslFI	GGGAC	2 cut(s)	17, 196
BslI	CCNNNNNNNGG	6 cut(s)	113, 192, 547, 614, 643, 681
BsmAI	GTCTC	1 cut(s)	260
BsmFI	GGGAC	2 cut(s)	17, 196
BsnI	GGCC	6 cut(s)	118, 170, 206, 248, 600, 618
Bso31I	GGTCTC	1 cut(s)	260
BsoBI	CYCGRG	1 cut(s)	608
Bsp120I	GGGCCC	1 cut(s)	204
Bsp1286I	GDGCHC	2 cut(s)	208, 535
Bsp13I	TCCGGA	1 cut(s)	106
Bsp143I	GATC	7 cut(s)	58, 261, 273, 324, 345, 376, 469
Bsp1720I	GCTNAGC	1 cut(s)	197
BspACI	CCGC	6 cut(s)	201, 401, 629, 652, 658, 661
BspANI	GGCC	6 cut(s)	118, 170, 206, 248, 600, 618
BspCNI	CTCAG	1 cut(s)	189
BspEI	TCCGGA	1 cut(s)	106
BspFNI	CGCG	1 cut(s)	41
BspLI	GGNNCC	5 cut(s)	68, 184, 205, 206, 599
BspPI	GGATC	3 cut(s)	340, 384, 477
BspTNI	GGTCTC	1 cut(s)	260
BsrBI	CCGCTC	3 cut(s)	201, 631, 652
BsrDI	GCAATG	1 cut(s)	447
BsrFI	RCCGGY	1 cut(s)	452
BsrI	ACTGG	1 cut(s)	341
BssAI	RCCGGY	1 cut(s)	452
BssECI	CCNNGG	2 cut(s)	17, 608
BssMI	GATC	7 cut(s)	58, 261, 273, 324, 345, 376, 469
BssNI	GRCGYC	1 cut(s)	11
BssSI	CACGAG	1 cut(s)	257
BssT1I	CCWWGG	1 cut(s)	17
Bst2BI	CACGAG	1 cut(s)	257
Bst4CI	ACNGT	1 cut(s)	296
Bst6I	CTCTTC	1 cut(s)	459
BstACI	GRCGYC	1 cut(s)	11
BstBAI	YACGTR	1 cut(s)	640
BstC8I	GCNNGC	4 cut(s)	126, 354, 454, 458
BstDEI	CTNAG	1 cut(s)	197
BstF5I	GGATG	2 cut(s)	133, 279
BstFNI	CGCG	1 cut(s)	41
BstH2I	RGCGCY	1 cut(s)	587
BstHHI	GCGC	2 cut(s)	43, 586
BstKTI	GATC	7 cut(s)	61, 264, 276, 327, 348, 379, 472
BstMAI	GTCTC	1 cut(s)	260
BstMBI	GATC	7 cut(s)	58, 261, 273, 324, 345, 376, 469
BstMWI	GCNNNNNNNGC	7 cut(s)	49, 130, 245, 658, 667, 676, 685
BstNSI	RCATGY	2 cut(s)	128, 503
BstSCI	CCNGG	4 cut(s)	387, 546, 607, 608
BstSLI	GKGCMC	1 cut(s)	208
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	1 cut(s)	667
BsuRI	GGCC	6 cut(s)	118, 170, 206, 248, 600, 618
BtsCI	GGATG	2 cut(s)	133, 279
Cac8I	GCNNGC	4 cut(s)	126, 354, 454, 458
CfoI	GCGC	2 cut(s)	43, 586
Cfr10I	RCCGGY	1 cut(s)	452
Cfr13I	GGNCC	6 cut(s)	116, 183, 204, 205, 247, 598
Cfr9I	CCCGGG	1 cut(s)	608
CseI	GACGC	1 cut(s)	92
Csp6I	GTAC	2 cut(s)	156, 481
CviAII	CATG	2 cut(s)	125, 500
CviQI	GTAC	2 cut(s)	156, 481
DdeI	CTNAG	1 cut(s)	197
DpnI	GATC	7 cut(s)	60, 263, 275, 326, 347, 378, 471
DpnII	GATC	7 cut(s)	58, 261, 273, 324, 345, 376, 469
Eam1104I	CTCTTC	1 cut(s)	459
EarI	CTCTTC	1 cut(s)	459
Ecl136II	GAGCTC	1 cut(s)	533
Eco130I	CCWWGG	1 cut(s)	17
Eco147I	AGGCCT	1 cut(s)	170
Eco24I	GRGCYC	2 cut(s)	208, 535
Eco31I	GGTCTC	1 cut(s)	260
Eco47I	GGWCC	1 cut(s)	183
Eco53kI	GAGCTC	1 cut(s)	533
Eco72I	CACGTG	1 cut(s)	640
Eco88I	CYCGRG	1 cut(s)	608
EcoICRI	GAGCTC	1 cut(s)	533
EcoO109I	RGGNCCY	2 cut(s)	183, 204
EcoT14I	CCWWGG	1 cut(s)	17
EcoT38I	GRGCYC	2 cut(s)	208, 535
ErhI	CCWWGG	1 cut(s)	17
FaeI	CATG	2 cut(s)	128, 503
FaiI	YATR	3 cut(s)	77, 126, 501
FaqI	GGGAC	2 cut(s)	17, 196
FatI	CATG	2 cut(s)	124, 499
FauI	CCCGC	2 cut(s)	194, 654
FbaI	TGATCA	1 cut(s)	324
Fnu4HI	GCNGC	5 cut(s)	629, 653, 656, 659, 686
FokI	GGATG	2 cut(s)	120, 266
FriOI	GRGCYC	2 cut(s)	208, 535
Fsp4HI	GCNGC	5 cut(s)	629, 653, 656, 659, 686
FspBI	CTAG	2 cut(s)	138, 614
GlaI	GCGC	2 cut(s)	42, 585
GluI	GCNGC	5 cut(s)	629, 653, 656, 659, 686
HaeII	RGCGCY	1 cut(s)	587
HaeIII	GGCC	6 cut(s)	118, 170, 206, 248, 600, 618
HapII	CCGG	6 cut(s)	107, 389, 453, 548, 601, 609
HgaI	GACGC	1 cut(s)	92
HhaI	GCGC	2 cut(s)	43, 586
Hin1I	GRCGYC	1 cut(s)	11
Hin1II	CATG	2 cut(s)	128, 503
Hin6I	GCGC	2 cut(s)	41, 584
HinP1I	GCGC	2 cut(s)	41, 584
HinfI	GANTC	1 cut(s)	560
HpaII	CCGG	6 cut(s)	107, 389, 453, 548, 601, 609
HphI	GGTGA	2 cut(s)	6, 664
Hpy188I	TCNGA	6 cut(s)	292, 329, 376, 420, 537, 565
Hpy188III	TCNNGA	4 cut(s)	107, 181, 265, 302
Hpy99I	CGWCG	1 cut(s)	296
HpyAV	CCTTC	1 cut(s)	181
HpyCH4III	ACNGT	1 cut(s)	296
HpyCH4IV	ACGT	1 cut(s)	639
HpyCH4V	TGCA	5 cut(s)	128, 148, 165, 279, 460
HpyF10VI	GCNNNNNNNGC	7 cut(s)	49, 130, 245, 658, 667, 676, 685
HpyF3I	CTNAG	1 cut(s)	197
HpySE526I	ACGT	1 cut(s)	639
Hsp92I	GRCGYC	1 cut(s)	11
Hsp92II	CATG	2 cut(s)	128, 503
HspAI	GCGC	2 cut(s)	41, 584
Kpn2I	TCCGGA	1 cut(s)	106
KroI	GCCGGC	1 cut(s)	452
KroNI	GCCGGC	1 cut(s)	454
Ksp22I	TGATCA	1 cut(s)	324
Kzo9I	GATC	7 cut(s)	58, 261, 273, 324, 345, 376, 469
LmnI	GCTCC	5 cut(s)	66, 100, 530, 538, 649
Lsp1109I	GCAGC	1 cut(s)	667
LweI	GCATC	5 cut(s)	72, 142, 152, 288, 453
MaeI	CTAG	2 cut(s)	138, 614
MaeII	ACGT	1 cut(s)	639
MaeIII	GTNAC	1 cut(s)	12
MalI	GATC	7 cut(s)	60, 263, 275, 326, 347, 378, 471
MbiI	CCGCTC	3 cut(s)	201, 631, 652
MboI	GATC	7 cut(s)	58, 261, 273, 324, 345, 376, 469
MboII	GAAGA	4 cut(s)	476, 532, 535, 601
MhlI	GDGCHC	2 cut(s)	208, 535
MluCI	AATT	1 cut(s)	212
MmeI	TCCRAC	4 cut(s)	315, 354, 588, 671
MnlI	CCTC	7 cut(s)	65, 196, 238, 460, 637, 640, 685
MroI	TCCGGA	1 cut(s)	106
MroNI	GCCGGC	1 cut(s)	452
MseI	TTAA	1 cut(s)	47
MslI	CAYNNNNRTG	1 cut(s)	80
MspA1I	CMGCKG	1 cut(s)	658
MspI	CCGG	6 cut(s)	107, 389, 453, 548, 601, 609
MspR9I	CCNGG	4 cut(s)	389, 548, 609, 610
MvnI	CGCG	1 cut(s)	41
MwoI	GCNNNNNNNGC	7 cut(s)	49, 130, 245, 658, 667, 676, 685
NaeI	GCCGGC	1 cut(s)	454
NciI	CCSGG	4 cut(s)	389, 548, 609, 610
NdeII	GATC	7 cut(s)	58, 261, 273, 324, 345, 376, 469
NgoMIV	GCCGGC	1 cut(s)	452
NlaIII	CATG	2 cut(s)	128, 503
NlaIV	GGNNCC	5 cut(s)	68, 184, 205, 206, 599
NmuCI	GTSAC	1 cut(s)	12
NspI	RCATGY	2 cut(s)	128, 503
PaeI	GCATGC	1 cut(s)	128
PceI	AGGCCT	1 cut(s)	170
PciI	ACATGT	1 cut(s)	499
PcsI	WCGNNNNNNNCGW	1 cut(s)	561
PdiI	GCCGGC	1 cut(s)	454
PfeI	GAWTC	1 cut(s)	560
PkrI	GCNGC	5 cut(s)	630, 654, 657, 660, 687
PmaCI	CACGTG	1 cut(s)	640
PmlI	CACGTG	1 cut(s)	640
Ppu21I	YACGTR	1 cut(s)	640
PpuMI	RGGWCCY	1 cut(s)	183
PscI	ACATGT	1 cut(s)	499
Psp124BI	GAGCTC	1 cut(s)	535
Psp5II	RGGWCCY	1 cut(s)	183
PspCI	CACGTG	1 cut(s)	640
PspN4I	GGNNCC	5 cut(s)	68, 184, 205, 206, 599
PspOMI	GGGCCC	1 cut(s)	204
PspPI	GGNCC	6 cut(s)	116, 183, 204, 205, 247, 598
PspPPI	RGGWCCY	1 cut(s)	183
RsaI	GTAC	2 cut(s)	157, 482
RsaNI	GTAC	2 cut(s)	156, 481
RseI	CAYNNNNRTG	1 cut(s)	80
SacI	GAGCTC	1 cut(s)	535
SaqAI	TTAA	1 cut(s)	47
SatI	GCNGC	5 cut(s)	629, 653, 656, 659, 686
Sau3AI	GATC	7 cut(s)	58, 261, 273, 324, 345, 376, 469
Sau96I	GGNCC	6 cut(s)	116, 183, 204, 205, 247, 598
ScrFI	CCNGG	4 cut(s)	389, 548, 609, 610
SduI	GDGCHC	2 cut(s)	208, 535
SetI	ASST	8 cut(s)	57, 188, 272, 479, 535, 642, 672, 677
SfaNI	GCATC	5 cut(s)	72, 142, 152, 288, 453
SinI	GGWCC	1 cut(s)	183
SmaI	CCCGGG	1 cut(s)	610
SmiMI	CAYNNNNRTG	1 cut(s)	80
SmlI	CTYRAG	1 cut(s)	404
SmoI	CTYRAG	1 cut(s)	404
SphI	GCATGC	1 cut(s)	128
Sse9I	AATT	1 cut(s)	212
SseBI	AGGCCT	1 cut(s)	170
SsiI	CCGC	6 cut(s)	201, 401, 629, 652, 658, 661
SspMI	CTAG	2 cut(s)	138, 614
SstI	GAGCTC	1 cut(s)	535
StuI	AGGCCT	1 cut(s)	170
StyD4I	CCNGG	4 cut(s)	387, 546, 607, 608
StyI	CCWWGG	1 cut(s)	17
TaaI	ACNGT	1 cut(s)	296
TaiI	ACGT	1 cut(s)	642
TaqI	TCGA	2 cut(s)	57, 264
TasI	AATT	1 cut(s)	212
TauI	GCSGC	3 cut(s)	631, 655, 661
TfiI	GAWTC	1 cut(s)	560
Tru1I	TTAA	1 cut(s)	47
Tru9I	TTAA	1 cut(s)	47
TseFI	GTSAC	1 cut(s)	12
TseI	GCWGC	2 cut(s)	655, 685
Tsp45I	GTSAC	1 cut(s)	12
TspDTI	ATGAA	2 cut(s)	400, 590
TspGWI	ACGGA	1 cut(s)	543
TspMI	CCCGGG	1 cut(s)	608
VpaK11BI	GGWCC	1 cut(s)	183
XapI	RAATTY	1 cut(s)	212
XceI	RCATGY	2 cut(s)	128, 503
XmaI	CCCGGG	1 cut(s)	608
XspI	CTAG	2 cut(s)	138, 614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.