Rw7G007440
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000212
Physical Location & Seq
Forward (+)
6588349 .. 6590382
2034 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G007440.1

Sequence Viewer

Length: 1407 bp
ATGGAAGAGATTAATATTATTCCGTCCTGTTCTCCACCCTATAGTATTTGTCAAGAAACCTCTGTAAACACACTTCAACAGCGCCTCCAGTTGATAGTTCAAAATCGGCCGGAATTTTGGGTCTACTCTATTTTCTGGCAAGCCACGAAAGACCGCAACGGCGGTGTTTCGTTGTCATGGGCCGGTGGCCATTTCAGAGGCAGCCGAGACTTCTCATCCAAGAAGTTGGATAACAATTACCAGCTCAAATTTGGGTTGGATCTGGAGAGGCCGAAGAAGGTGATCAACCGACAAGTCGAAGCTCTGTTCCAGGAAGACATGGACATGGAGAGACTGGTGGACATTAATGGAGATGTGACTGATTCGGAGTGGTTTTACTTCTACACCCTTTCTTTGACACAGTCCTTTGCTGCAGGCCATGGGAGTAACAATATTCTTGGCCGTTCATTTTGTTCCGGCGCGTTTGTGTGGTTGGCAGGAGATCAGGAGCTTCAGTTTTATGAGTGTGAGAGAGTTAAGGAGGCTCGCATGTCTGGAATTCAAACACTTGTTTGTATTCCAACTCCCTATGGGGTGATTGAACTTGCTTCTTTGGAAGTGATTAAAGAAGATTGGGGTTTTGTGCAGAACTCAAAGTCAATTTTTGGGTCCGACATAATCACAGCCAGCGGCAGCGTCTCAAATTCAAAGCAGGATCATGTTCATGTTCCTCAGCTGCAAAACTCTATGTTTCCACGATCAGATCAAAAGGAGTGGACGACACAAGAAGGTGGTAGGAAAGAAAATGTCCACTTAAGTGGATCATCATCTGACTCCGGGCCTTCCGAGAATACATCAAACACTCGATTGAGAAAGAGAGGAAGATCAGACAAAGGCGAGCGAGATTCACCAATAAACCATGTGGAGGCCGAGAGACAACGACGGGAAAAGCTTAATCACCGATTCTATGCCCTCCGATCCGTCGTTCCTAATGTATCGAAGATGGATAAAGCTTCTTTACTCTCTGATGCAGTTGTATACATCAATAATCTTAAGACAAAGATTGAGGAGTTGGAAGCAAAAATTCAAGCACAACCCAAGAAACCCAAACCAAGTATCATGAGTGACAATACTCTTGACTACAGCCAAGGCACGAGCTCCTTAACTTATAGAGCCGCTGCTGCTACAGAGGTGGATGTGAAGATTGTAGGCTCCGAAGCCATGATTCGAGTCCGATGTCCAGATAATAAGGACTATCCAAATGCTAGATTGATGAATGCACTCAAACACCTTGAATTACAAATTCATCATGCAAGCATATCAAGTGTGAACGACTTCATGCTTCAAGATGTTGTGGCAAGAGTTCCTGATGGATTCACAAGCGAGGAGGCTATGAGAACTGCTATTATAAATAGATTTTCCAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

468

Amino Acids

52.85

Weight (kDa)

6.4

Isoelectric Point (pI)

44.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 25 - 215 3.9e-43 bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH PF00010 299 - 345 2e-11 Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant PF22754 390 - 462 1.9e-09 Plant bHLH transcription factor, ACT-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1388
AccI GTMKAC 2 cut(s) 123, 1017
AccII CGCG 1 cut(s) 461
AciI CCGC 4 cut(s) 154, 162, 669, 1155
AclWI GGATC 4 cut(s) 267, 702, 808, 951
AcoI YGGCCR 3 cut(s) 107, 187, 439
AcsI RAATTY 6 cut(s) 113, 248, 537, 682, 1062, 1281
AcuI CTGAAG 1 cut(s) 476
AfiI CCNNNNNNNGG 1 cut(s) 904
AflII CTTAAG 2 cut(s) 793, 1031
AgsI TTSAA 8 cut(s) 77, 101, 542, 581, 687, 1067, 1274, 1325
AjnI CCWGG 1 cut(s) 309
AleI CACNNNNGTG 1 cut(s) 795
AluBI AGCT 7 cut(s) 244, 302, 490, 715, 931, 992, 1137
AluI AGCT 7 cut(s) 244, 302, 490, 715, 931, 992, 1137
Alw21I GWGCWC 1 cut(s) 1139
Alw26I GTCTC 4 cut(s) 201, 325, 682, 907
AlwI GGATC 4 cut(s) 267, 702, 808, 951
AoxI GGCC 8 cut(s) 107, 180, 187, 269, 415, 439, 818, 906
ApeKI GCWGC 6 cut(s) 201, 410, 672, 715, 1157, 1160
ApoI RAATTY 6 cut(s) 113, 248, 537, 682, 1062, 1281
AseI ATTAAT 2 cut(s) 12, 345
Asp700I GAANNNNTTC 1 cut(s) 1313
AspLEI GCGC 2 cut(s) 84, 461
AspS9I GGNCC 3 cut(s) 180, 648, 818
AsuC2I CCSGG 1 cut(s) 817
AsuHPI GGTGA 4 cut(s) 292, 586, 879, 929
AvaII GGWCC 1 cut(s) 648
BalI TGGCCA 1 cut(s) 189
BanII GRGCYC 1 cut(s) 1139
BarI GAAGNNNNNNTAC 2 cut(s) 57, 89
BauI CACGAG 1 cut(s) 1132
BbsI GAAGAC 1 cut(s) 321
Bbv12I GWGCWC 1 cut(s) 1139
BbvCI CCTCAGC 1 cut(s) 711
BbvI GCAGC 6 cut(s) 213, 397, 684, 702, 1144, 1147
BccI CCATC 2 cut(s) 976, 1343
BceAI ACGGC 2 cut(s) 175, 426
BciT130I CCWGG 1 cut(s) 311
BclI TGATCA 1 cut(s) 282
BcnI CCSGG 1 cut(s) 817
BcoDI GTCTC 4 cut(s) 201, 325, 682, 907
BfaI CTAG 2 cut(s) 1245, 1405
BfmI CTRYAG 4 cut(s) 40, 411, 1120, 1164
BfoI RGCGCY 1 cut(s) 85
BfrI CTTAAG 2 cut(s) 793, 1031
BisI GCNGC 8 cut(s) 202, 411, 670, 673, 716, 1155, 1158, 1161
BlsI GCNGC 8 cut(s) 203, 412, 671, 674, 717, 1156, 1159, 1162
Bme1390I CCNGG 2 cut(s) 311, 817
Bme18I GGWCC 1 cut(s) 648
BmgT120I GGNCC 3 cut(s) 180, 648, 818
BmiI GGNNCC 2 cut(s) 649, 1192
BmrFI CCNGG 2 cut(s) 311, 817
BmsI GCATC 1 cut(s) 997
BpiI GAAGAC 1 cut(s) 321
BpmI CTGGAG 2 cut(s) 71, 284
Bpu10I CCTNAGC 1 cut(s) 711
BpuMI CCSGG 1 cut(s) 817
BsaBI GATNNNNATC 1 cut(s) 805
BsaJI CCNNGG 2 cut(s) 418, 1126
BsaXI ACNNNNNCTCC 4 cut(s) 69, 99, 479, 509
Bsc4I CCNNNNNNNGG 1 cut(s) 904
Bse118I RCCGGY 1 cut(s) 182
Bse1I ACTGG 2 cut(s) 88, 339
Bse8I GATNNNNATC 1 cut(s) 805
BseBI CCWGG 1 cut(s) 311
BseDI CCNNGG 2 cut(s) 418, 1126
BseGI GGATG 2 cut(s) 215, 1180
BseJI GATNNNNATC 1 cut(s) 805
BseLI CCNNNNNNNGG 1 cut(s) 904
BseMII CTCAG 1 cut(s) 725
BseNI ACTGG 2 cut(s) 88, 339
BseRI GAGGAG 2 cut(s) 1061, 1379
BseX3I CGGCCG 1 cut(s) 107
BseXI GCAGC 6 cut(s) 213, 397, 684, 702, 1144, 1147
BsgI GTGCAG 1 cut(s) 644
Bsh1236I CGCG 1 cut(s) 461
Bsh1285I CGRYCG 1 cut(s) 110
BshFI GGCC 8 cut(s) 109, 182, 189, 271, 417, 441, 820, 908
BsiEI CGRYCG 1 cut(s) 110
BsiHKAI GWGCWC 1 cut(s) 1139
BsiSI CCGG 4 cut(s) 110, 183, 456, 816
BslI CCNNNNNNNGG 1 cut(s) 904
BsmAI GTCTC 4 cut(s) 201, 325, 682, 907
BsmBI CGTCTC 1 cut(s) 682
BsmI GAATGC 1 cut(s) 1261
BsnI GGCC 8 cut(s) 109, 182, 189, 271, 417, 441, 820, 908
Bsp1286I GDGCHC 1 cut(s) 1139
Bsp143I GATC 9 cut(s) 259, 282, 481, 694, 737, 742, 800, 863, 956
Bsp19I CCATGG 1 cut(s) 418
BspACI CCGC 4 cut(s) 154, 162, 669, 1155
BspANI GGCC 8 cut(s) 109, 182, 189, 271, 417, 441, 820, 908
BspCNI CTCAG 1 cut(s) 724
BspFNI CGCG 1 cut(s) 461
BspHI TCATGA 1 cut(s) 1098
BspLI GGNNCC 2 cut(s) 649, 1192
BspMAI CTGCAG 1 cut(s) 415
BspPI GGATC 4 cut(s) 267, 702, 808, 951
BspTI CTTAAG 2 cut(s) 793, 1031
BsrFI RCCGGY 1 cut(s) 182
BsrI ACTGG 2 cut(s) 88, 339
BssAI RCCGGY 1 cut(s) 182
BssECI CCNNGG 2 cut(s) 418, 1126
BssMI GATC 9 cut(s) 259, 282, 481, 694, 737, 742, 800, 863, 956
BssNAI GTATAC 1 cut(s) 1018
BssSI CACGAG 1 cut(s) 1132
BssT1I CCWWGG 2 cut(s) 418, 1126
Bst1107I GTATAC 1 cut(s) 1018
Bst2BI CACGAG 1 cut(s) 1132
Bst2UI CCWGG 1 cut(s) 311
Bst4CI ACNGT 1 cut(s) 402
BstAFI CTTAAG 2 cut(s) 793, 1031
BstC8I GCNNGC 6 cut(s) 141, 415, 526, 667, 878, 1294
BstDEI CTNAG 1 cut(s) 711
BstDSI CCRYGG 1 cut(s) 418
BstF5I GGATG 2 cut(s) 215, 1180
BstFNI CGCG 1 cut(s) 461
BstH2I RGCGCY 1 cut(s) 85
BstHHI GCGC 2 cut(s) 84, 461
BstKTI GATC 9 cut(s) 262, 285, 484, 697, 740, 745, 803, 866, 959
BstMAI GTCTC 4 cut(s) 201, 325, 682, 907
BstMBI GATC 9 cut(s) 259, 282, 481, 694, 737, 742, 800, 863, 956
BstMCI CGRYCG 1 cut(s) 110
BstMWI GCNNNNNNNGC 1 cut(s) 1160
BstNI CCWGG 1 cut(s) 311
BstNSI RCATGY 1 cut(s) 532
BstSCI CCNGG 2 cut(s) 309, 815
BstSFI CTRYAG 4 cut(s) 40, 411, 1120, 1164
BstUI CGCG 1 cut(s) 461
BstV1I GCAGC 6 cut(s) 213, 397, 684, 702, 1144, 1147
BstV2I GAAGAC 1 cut(s) 321
BstX2I RGATCY 1 cut(s) 259
BstXI CCANNNNNNTGG 2 cut(s) 226, 797
BstYI RGATCY 1 cut(s) 259
BstZ17I GTATAC 1 cut(s) 1018
BstZI CGGCCG 1 cut(s) 107
BsuRI GGCC 8 cut(s) 109, 182, 189, 271, 417, 441, 820, 908
BtgI CCRYGG 1 cut(s) 418
BtsCI GGATG 2 cut(s) 215, 1180
Cac8I GCNNGC 6 cut(s) 141, 415, 526, 667, 878, 1294
CciI TCATGA 1 cut(s) 1098
CfoI GCGC 2 cut(s) 84, 461
Cfr10I RCCGGY 1 cut(s) 182
Cfr13I GGNCC 3 cut(s) 180, 648, 818
CseI GACGC 1 cut(s) 664
CspCI CAANNNNNGTGG 2 cut(s) 734, 769
DdeI CTNAG 1 cut(s) 711
DpnI GATC 9 cut(s) 261, 284, 483, 696, 739, 744, 802, 865, 958
DpnII GATC 9 cut(s) 259, 282, 481, 694, 737, 742, 800, 863, 956
EaeI YGGCCR 3 cut(s) 107, 187, 439
EagI CGGCCG 1 cut(s) 107
Ecl136II GAGCTC 1 cut(s) 1137
EclXI CGGCCG 1 cut(s) 107
Eco130I CCWWGG 2 cut(s) 418, 1126
Eco24I GRGCYC 1 cut(s) 1139
Eco47I GGWCC 1 cut(s) 648
Eco52I CGGCCG 1 cut(s) 107
Eco53kI GAGCTC 1 cut(s) 1137
Eco57I CTGAAG 1 cut(s) 476
EcoICRI GAGCTC 1 cut(s) 1137
EcoRI GAATTC 1 cut(s) 537
EcoRII CCWGG 1 cut(s) 309
EcoT14I CCWWGG 2 cut(s) 418, 1126
EcoT38I GRGCYC 1 cut(s) 1139
ErhI CCWWGG 2 cut(s) 418, 1126
Esp3I CGTCTC 1 cut(s) 682
FbaI TGATCA 1 cut(s) 282
FblI GTMKAC 2 cut(s) 123, 1017
Fnu4HI GCNGC 8 cut(s) 202, 411, 670, 673, 716, 1155, 1158, 1161
FokI GGATG 2 cut(s) 202, 1187
FriOI GRGCYC 1 cut(s) 1139
Fsp4HI GCNGC 8 cut(s) 202, 411, 670, 673, 716, 1155, 1158, 1161
FspBI CTAG 2 cut(s) 1245, 1405
GlaI GCGC 2 cut(s) 83, 460
GluI GCNGC 8 cut(s) 202, 411, 670, 673, 716, 1155, 1158, 1161
GsuI CTGGAG 2 cut(s) 71, 284
HaeII RGCGCY 1 cut(s) 85
HaeIII GGCC 8 cut(s) 109, 182, 189, 271, 417, 441, 820, 908
HapII CCGG 4 cut(s) 110, 183, 456, 816
HgaI GACGC 1 cut(s) 664
HhaI GCGC 2 cut(s) 84, 461
Hin6I GCGC 2 cut(s) 82, 459
HinP1I GCGC 2 cut(s) 82, 459
HindIII AAGCTT 2 cut(s) 929, 990
HinfI GANTC 7 cut(s) 362, 812, 884, 942, 1204, 1209, 1353
HpaII CCGG 4 cut(s) 110, 183, 456, 816
HphI GGTGA 4 cut(s) 292, 586, 879, 929
Hpy166II GTNNAC 7 cut(s) 67, 124, 340, 756, 790, 1018, 1309
Hpy188III TCNNGA 9 cut(s) 53, 263, 485, 534, 1099, 1115, 1220, 1325, 1346
Hpy8I GTNNAC 7 cut(s) 67, 124, 340, 756, 790, 1018, 1309
Hpy99I CGWCG 2 cut(s) 924, 965
HpyAV CCTTC 3 cut(s) 271, 761, 831
HpyCH4III ACNGT 1 cut(s) 402
HpyCH4V TGCA 6 cut(s) 413, 625, 718, 1010, 1259, 1292
HpyF10VI GCNNNNNNNGC 1 cut(s) 1160
HpyF3I CTNAG 1 cut(s) 711
HspAI GCGC 2 cut(s) 82, 459
Ksp22I TGATCA 1 cut(s) 282
Kzo9I GATC 9 cut(s) 259, 282, 481, 694, 737, 742, 800, 863, 956
LmnI GCTCC 3 cut(s) 487, 1142, 1196
Lsp1109I GCAGC 6 cut(s) 213, 397, 684, 702, 1144, 1147
LweI GCATC 1 cut(s) 997
MaeI CTAG 2 cut(s) 1245, 1405
MaeIII GTNAC 3 cut(s) 355, 425, 1103
MalI GATC 9 cut(s) 261, 284, 483, 696, 739, 744, 802, 865, 958
MboI GATC 9 cut(s) 259, 282, 481, 694, 737, 742, 800, 863, 956
MboII GAAGA 7 cut(s) 17, 286, 326, 620, 873, 991, 1192
MflI RGATCY 1 cut(s) 259
MhlI GDGCHC 1 cut(s) 1139
MlsI TGGCCA 1 cut(s) 189
MluCI AATT 9 cut(s) 113, 235, 248, 537, 639, 682, 1062, 1274, 1281
MluNI TGGCCA 1 cut(s) 189
MlyI GAGTC 2 cut(s) 806, 1218
MmeI TCCRAC 5 cut(s) 207, 237, 584, 675, 1032
Mox20I TGGCCA 1 cut(s) 189
MroXI GAANNNNTTC 1 cut(s) 1313
MscI TGGCCA 1 cut(s) 189
MseI TTAA 8 cut(s) 12, 345, 516, 603, 794, 933, 1032, 1142
MslI CAYNNNNRTG 3 cut(s) 323, 702, 795
Msp20I TGGCCA 1 cut(s) 189
MspA1I CMGCKG 3 cut(s) 669, 715, 1157
MspCI CTTAAG 2 cut(s) 793, 1031
MspI CCGG 4 cut(s) 110, 183, 456, 816
MspR9I CCNGG 2 cut(s) 311, 817
Mva1269I GAATGC 1 cut(s) 1261
MvaI CCWGG 1 cut(s) 311
MvnI CGCG 1 cut(s) 461
MwoI GCNNNNNNNGC 1 cut(s) 1160
NciI CCSGG 1 cut(s) 817
NcoI CCATGG 1 cut(s) 418
NdeII GATC 9 cut(s) 259, 282, 481, 694, 737, 742, 800, 863, 956
NlaIV GGNNCC 2 cut(s) 649, 1192
NmeAIII GCCGAG 2 cut(s) 230, 934
NmuCI GTSAC 2 cut(s) 355, 1103
NspI RCATGY 1 cut(s) 532
OliI CACNNNNGTG 1 cut(s) 795
PagI TCATGA 1 cut(s) 1098
PctI GAATGC 1 cut(s) 1261
PdmI GAANNNNTTC 1 cut(s) 1313
PfeI GAWTC 5 cut(s) 362, 884, 942, 1204, 1353
PflFI GACNNNGTC 1 cut(s) 400
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 8 cut(s) 203, 412, 671, 674, 717, 1156, 1159, 1162
PleI GAGTC 2 cut(s) 806, 1217
PpsI GAGTC 2 cut(s) 806, 1217
PshBI ATTAAT 2 cut(s) 12, 345
PsiI TTATAA 1 cut(s) 1388
Psp124BI GAGCTC 1 cut(s) 1139
Psp6I CCWGG 1 cut(s) 309
PspGI CCWGG 1 cut(s) 309
PspN4I GGNNCC 2 cut(s) 649, 1192
PspPI GGNCC 3 cut(s) 180, 648, 818
PstI CTGCAG 1 cut(s) 415
PsuI RGATCY 1 cut(s) 259
PsyI GACNNNGTC 1 cut(s) 400
PvuII CAGCTG 1 cut(s) 715
RseI CAYNNNNRTG 3 cut(s) 323, 702, 795
SacI GAGCTC 1 cut(s) 1139
SaqAI TTAA 8 cut(s) 12, 345, 516, 603, 794, 933, 1032, 1142
SatI GCNGC 8 cut(s) 202, 411, 670, 673, 716, 1155, 1158, 1161
Sau3AI GATC 9 cut(s) 259, 282, 481, 694, 737, 742, 800, 863, 956
Sau96I GGNCC 3 cut(s) 180, 648, 818
SchI GAGTC 2 cut(s) 806, 1218
ScrFI CCNGG 2 cut(s) 311, 817
SduI GDGCHC 1 cut(s) 1139
SfaNI GCATC 1 cut(s) 997
SfcI CTRYAG 4 cut(s) 40, 411, 1120, 1164
SinI GGWCC 1 cut(s) 648
SmiMI CAYNNNNRTG 3 cut(s) 323, 702, 795
SmlI CTYRAG 2 cut(s) 793, 1031
SmoI CTYRAG 2 cut(s) 793, 1031
Sse9I AATT 9 cut(s) 113, 235, 248, 537, 639, 682, 1062, 1274, 1281
SsiI CCGC 4 cut(s) 154, 162, 669, 1155
SspI AATATT 2 cut(s) 16, 433
SspMI CTAG 2 cut(s) 1245, 1405
SstI GAGCTC 1 cut(s) 1139
StyD4I CCNGG 2 cut(s) 309, 815
StyI CCWWGG 2 cut(s) 418, 1126
TaaI ACNGT 1 cut(s) 402
TaqI TCGA 4 cut(s) 297, 844, 977, 1207
TasI AATT 9 cut(s) 113, 235, 248, 537, 639, 682, 1062, 1274, 1281
TauI GCSGC 2 cut(s) 672, 1157
TfiI GAWTC 5 cut(s) 362, 884, 942, 1204, 1353
Tru1I TTAA 8 cut(s) 12, 345, 516, 603, 794, 933, 1032, 1142
Tru9I TTAA 8 cut(s) 12, 345, 516, 603, 794, 933, 1032, 1142
TseFI GTSAC 2 cut(s) 355, 1103
TseI GCWGC 6 cut(s) 201, 410, 672, 715, 1157, 1160
Tsp45I GTSAC 2 cut(s) 355, 1103
TspDTI ATGAA 5 cut(s) 435, 692, 1268, 1274, 1306
TspGWI ACGGA 2 cut(s) 12, 949
Tth111I GACNNNGTC 1 cut(s) 400
Vha464I CTTAAG 2 cut(s) 793, 1031
VpaK11BI GGWCC 1 cut(s) 648
VspI ATTAAT 2 cut(s) 12, 345
XapI RAATTY 6 cut(s) 113, 248, 537, 682, 1062, 1281
XceI RCATGY 1 cut(s) 532
XcmI CCANNNNNNNNNTGG 1 cut(s) 248
XmiI GTMKAC 2 cut(s) 123, 1017
XmnI GAANNNNTTC 1 cut(s) 1313
XspI CTAG 2 cut(s) 1245, 1405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.