FvH4_7g17380
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000212
Physical Location & Seq
Forward (+)
14794114 .. 14796424
2311 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g17380.t1

Sequence Viewer

Length: 1476 bp
ATGGATGACCTGATCATCTCTCCTACTTCATCTTCTTCCTTGGTCTCTCTCCCACACGAGCCAGCAACCCTGCAGCAGAGGCTGCAGTTCATACTCCAAAGCCAGCCTGAGTTGTGGTCCTACGCCATTTTCTGGCTGGCCTCCAACGACGTCGAAAATGGCCGCCTCCTCCTCGGTTGGGGAGACGGCCATTTTCAGGGCCCCGAGGACCCATCGCCCGACCTCAACAACCGTCTCTCCTCCTCGGGTGATGGGTCCTTGCTTCACTCGGACAGAAGAAAAATCCTCAAGGGCATACAGTCCATCCTCAACGACACCAACAACAACAACCCGGAGCTCGACATGGACAACTTCATGGCCCTAAACGGCGACGTATCCGACGCAGAGTGGTTCTACGTCATGTCCCTGACTCGATCCTTCGCCATCGGGGATGGCTCTGTTCCCGGCAAGGCCTTCGGCTCCGGGTCCTTCGTCTGGCTGAGCGGGGCCCACGAGCTTCAGTTCAACAGCTGCGAGAGAGCAAAAGAGGCCCAAATTCATGGGATCGAGACCTTGATCTGCATCCCTACTTCCAACGGTGTTCTTGAGATGGGTTCCTCCGGTTTGGTCAGAGAGAACTGGGGGTTGATCCAGCAAGCTAAGTCCTTATTCGGGTCGGATCAGCCCGACCCCGAAACCAGACCGCTCGAGTTCATCAACCGGAACTTCTCCTTCGCTGACATCGGCATCGTTGCCGGCGTGCAGGAAGAGGACAACAGCTCTTACAATGACGACAAGAAGCATGTTTTGGGTTATAACAAGAAGAAGAACAACAATGGACTTCAGAATCCAACCCCGGCGGACTTTGCCGATTCCGACTTTCAGCTGAAAAGAACACCGAAGAAACGAGGCCGGAAGCCCGGGATGGGCCGAGACACACCGCTGAACCACGTGGAGGCGGAGCGGCAGCGGCGGGAGAAGCTCAACCACCGGTTCTATGCTCTACGCGCGGTGGTTCCCAACGTGTCGAGAATGGACAAGGCGTCGTTGCTTTCCGACGCCGTGTCCTATATCAATGAGCTGAAGGCCAAAGTGGACGAGCTGGAGTCGCAGCTGCAGAGGGAGTCGAAGAAAGTGAAGGTGGAAATGGCGGATAATCTTGACAACCAGAGCACCACCACCACCGCCTCCGTGGAGCAAACGCAAACAGTAACGCCTGATAACAACAACAACAACAACAACGGGTCGGGTCTCGAAATTGAGGTGAAGATAGTGGGGACGGACGCCATGATTAGGGTTCAGTCGGAGAATGTGAACTACCCATCAGCGAGGTTAATGACGGCGATGCGTGACCTAGAGTTCCAAATCCACCATGCGAGCTTGTCAAGCATCAATGATCTTATGCTGCAAGATATTGTGGTCAAGGTTCCTGATAACATGAAAAACGAAGAAGGTCTCAAAGCTGCTCTGCTCGGAATCTTAGATCAAAACGAATAA

Protein Analysis

492

Amino Acids

54.53

Weight (kDa)

5.05

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 24 - 217 4.9e-49 bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH PF00010 309 - 355 9.5e-12 Helix-loop-helix DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 795
AatII GACGTC 1 cut(s) 153
AccB7I CCANNNNNTGG 1 cut(s) 132
AccBSI CCGCTC 3 cut(s) 483, 685, 943
AccII CGCG 2 cut(s) 987, 989
AclWI GGATC 4 cut(s) 408, 551, 622, 666
AcoI YGGCCR 2 cut(s) 160, 187
AcsI RAATTY 1 cut(s) 534
AcuI CTGAAG 3 cut(s) 482, 806, 1082
AcvI CACGTG 1 cut(s) 931
AcyI GRCGYC 4 cut(s) 150, 1022, 1038, 1263
AfiI CCNNNNNNNGG 8 cut(s) 132, 178, 196, 474, 651, 905, 934, 1272
AflIII ACRYGT 1 cut(s) 1002
AgeI ACCGGT 1 cut(s) 969
AgsI TTSAA 1 cut(s) 505
AhdI GACNNNNNGTC 2 cut(s) 1021, 1042
AjuI GAANNNNNNNTTGG 2 cut(s) 770, 802
Alw21I GWGCWC 2 cut(s) 339, 1154
Alw26I GTCTC 7 cut(s) 49, 177, 239, 542, 906, 1235, 1439
AlwI GGATC 4 cut(s) 408, 551, 622, 666
AlwNI CAGNNNCTG 1 cut(s) 82
Ama87I CYCGRG 4 cut(s) 203, 244, 686, 899
ApaI GGGCCC 2 cut(s) 203, 490
ApeKI GCWGC 8 cut(s) 73, 82, 510, 946, 1090, 1093, 1384, 1442
ApoI RAATTY 1 cut(s) 534
AsiGI ACCGGT 1 cut(s) 969
AspLEI GCGC 1 cut(s) 989
AsuC2I CCSGG 6 cut(s) 332, 444, 463, 836, 900, 901
AsuHPI GGTGA 2 cut(s) 260, 1255
AvaI CYCGRG 4 cut(s) 203, 244, 686, 899
AvaII GGWCC 4 cut(s) 117, 208, 255, 465
BaeGI GKGCMC 2 cut(s) 203, 490
BanII GRGCYC 3 cut(s) 203, 339, 490
BauI CACGAG 2 cut(s) 56, 491
BbrPI CACGTG 1 cut(s) 931
Bbv12I GWGCWC 2 cut(s) 339, 1154
BbvI GCAGC 8 cut(s) 69, 85, 497, 958, 1080, 1102, 1371, 1429
BccI CCATC 8 cut(s) 220, 245, 311, 425, 431, 583, 898, 1309
BceAI ACGGC 4 cut(s) 202, 382, 1025, 1335
BcgI CGANNNNNNTGC 2 cut(s) 436, 470
BciVI GTATCC 1 cut(s) 385
BclI TGATCA 1 cut(s) 12
BcnI CCSGG 6 cut(s) 332, 444, 463, 836, 900, 901
BcoDI GTCTC 7 cut(s) 49, 177, 239, 542, 906, 1235, 1439
BfaI CTAG 1 cut(s) 1334
BfmI CTRYAG 3 cut(s) 71, 83, 1094
BfuI GTATCC 1 cut(s) 385
BlpI GCTNAGC 1 cut(s) 479
Bme1390I CCNGG 6 cut(s) 332, 444, 463, 836, 900, 901
Bme18I GGWCC 4 cut(s) 117, 208, 255, 465
BmeRI GACNNNNNGTC 2 cut(s) 1021, 1042
BmeT110I CYCGRG 4 cut(s) 203, 244, 686, 899
BmrFI CCNGG 6 cut(s) 332, 444, 463, 836, 900, 901
BmrI ACTGGG 1 cut(s) 628
BmsI GCATC 4 cut(s) 570, 735, 1314, 1377
BmuI ACTGGG 1 cut(s) 628
BpmI CTGGAG 1 cut(s) 1103
Bpu1102I GCTNAGC 1 cut(s) 479
BpuEI CTTGAG 2 cut(s) 272, 605
BpuMI CCSGG 6 cut(s) 332, 444, 463, 836, 900, 901
BsaAI YACGTR 1 cut(s) 931
BsaBI GATNNNNATC 1 cut(s) 560
BsaHI GRCGYC 4 cut(s) 150, 1022, 1038, 1263
BsaI GGTCTC 4 cut(s) 49, 542, 1235, 1439
BsaJI CCNNGG 7 cut(s) 39, 172, 204, 243, 834, 899, 1170
BsaWI WCCGGW 3 cut(s) 599, 699, 969
BsaXI ACNNNNNCTCC 2 cut(s) 221, 251
Bsc4I CCNNNNNNNGG 8 cut(s) 132, 178, 196, 474, 651, 905, 934, 1272
Bse118I RCCGGY 2 cut(s) 734, 969
Bse1I ACTGG 1 cut(s) 623
Bse8I GATNNNNATC 1 cut(s) 560
BseDI CCNNGG 7 cut(s) 39, 172, 204, 243, 834, 899, 1170
BseGI GGATG 5 cut(s) 10, 303, 436, 561, 909
BseJI GATNNNNATC 1 cut(s) 560
BseLI CCNNNNNNNGG 8 cut(s) 132, 178, 196, 474, 651, 905, 934, 1272
BseMII CTCAG 2 cut(s) 99, 470
BseNI ACTGG 1 cut(s) 623
BseRI GAGGAG 4 cut(s) 158, 161, 229, 232
BseSI GKGCMC 2 cut(s) 203, 490
BseXI GCAGC 8 cut(s) 69, 85, 497, 958, 1080, 1102, 1371, 1429
BsgI GTGCAG 1 cut(s) 761
Bsh1236I CGCG 2 cut(s) 987, 989
BshTI ACCGGT 1 cut(s) 969
BsiHKAI GWGCWC 2 cut(s) 339, 1154
BsiHKCI CYCGRG 4 cut(s) 203, 244, 686, 899
BslFI GGGAC 2 cut(s) 388, 1270
BslI CCNNNNNNNGG 8 cut(s) 132, 178, 196, 474, 651, 905, 934, 1272
BsmAI GTCTC 7 cut(s) 49, 177, 239, 542, 906, 1235, 1439
BsmBI CGTCTC 2 cut(s) 177, 239
BsmFI GGGAC 2 cut(s) 388, 1270
Bso31I GGTCTC 4 cut(s) 49, 542, 1235, 1439
BsoBI CYCGRG 4 cut(s) 203, 244, 686, 899
Bsp120I GGGCCC 2 cut(s) 199, 486
Bsp1286I GDGCHC 4 cut(s) 203, 339, 490, 1154
Bsp143I GATC 8 cut(s) 12, 413, 543, 555, 627, 658, 1375, 1462
Bsp1720I GCTNAGC 1 cut(s) 479
BspCNI CTCAG 2 cut(s) 100, 471
BspFNI CGCG 2 cut(s) 987, 989
BspMAI CTGCAG 3 cut(s) 75, 87, 1098
BspPI GGATC 4 cut(s) 408, 551, 622, 666
BspTNI GGTCTC 4 cut(s) 49, 542, 1235, 1439
BsrBI CCGCTC 3 cut(s) 483, 685, 943
BsrFI RCCGGY 2 cut(s) 734, 969
BsrI ACTGG 1 cut(s) 623
BssAI RCCGGY 2 cut(s) 734, 969
BssECI CCNNGG 7 cut(s) 39, 172, 204, 243, 834, 899, 1170
BssMI GATC 8 cut(s) 12, 413, 543, 555, 627, 658, 1375, 1462
BssNI GRCGYC 4 cut(s) 150, 1022, 1038, 1263
BssSI CACGAG 2 cut(s) 56, 491
BssT1I CCWWGG 1 cut(s) 39
Bst2BI CACGAG 2 cut(s) 56, 491
Bst4CI ACNGT 4 cut(s) 233, 300, 578, 1189
Bst6I CTCTTC 1 cut(s) 741
BstACI GRCGYC 4 cut(s) 150, 1022, 1038, 1263
BstAPI GCANNNNNTGC 1 cut(s) 82
BstBAI YACGTR 1 cut(s) 931
BstC8I GCNNGC 7 cut(s) 63, 104, 138, 636, 736, 740, 1357
BstDEI CTNAG 4 cut(s) 108, 479, 639, 1459
BstDSI CCRYGG 1 cut(s) 1170
BstF5I GGATG 5 cut(s) 10, 303, 436, 561, 909
BstFNI CGCG 2 cut(s) 987, 989
BstHHI GCGC 1 cut(s) 989
BstKTI GATC 8 cut(s) 15, 416, 546, 558, 630, 661, 1378, 1465
BstMAI GTCTC 7 cut(s) 49, 177, 239, 542, 906, 1235, 1439
BstMBI GATC 8 cut(s) 12, 413, 543, 555, 627, 658, 1375, 1462
BstMWI GCNNNNNNNGC 9 cut(s) 79, 82, 527, 845, 949, 958, 986, 1087, 1365
BstNSI RCATGY 1 cut(s) 785
BstSCI CCNGG 6 cut(s) 330, 442, 461, 834, 898, 899
BstSFI CTRYAG 3 cut(s) 71, 83, 1094
BstSLI GKGCMC 2 cut(s) 203, 490
BstUI CGCG 2 cut(s) 987, 989
BstV1I GCAGC 8 cut(s) 69, 85, 497, 958, 1080, 1102, 1371, 1429
BstXI CCANNNNNNTGG 1 cut(s) 539
BsuI GTATCC 1 cut(s) 385
BtgI CCRYGG 1 cut(s) 1170
BtgZI GCGATG 2 cut(s) 198, 1337
BtsCI GGATG 5 cut(s) 10, 303, 436, 561, 909
Cac8I GCNNGC 7 cut(s) 63, 104, 138, 636, 736, 740, 1357
CaiI CAGNNNCTG 1 cut(s) 82
CfoI GCGC 1 cut(s) 989
Cfr10I RCCGGY 2 cut(s) 734, 969
Cfr9I CCCGGG 1 cut(s) 899
CseI GACGC 4 cut(s) 389, 1011, 1046, 1271
CspAI ACCGGT 1 cut(s) 969
CviAII CATG 8 cut(s) 343, 355, 400, 539, 782, 1267, 1352, 1417
DdeI CTNAG 4 cut(s) 108, 479, 639, 1459
DpnI GATC 8 cut(s) 14, 415, 545, 557, 629, 660, 1377, 1464
DpnII GATC 8 cut(s) 12, 413, 543, 555, 627, 658, 1375, 1462
DriI GACNNNNNGTC 2 cut(s) 1021, 1042
EaeI YGGCCR 2 cut(s) 160, 187
Eam1104I CTCTTC 1 cut(s) 741
Eam1105I GACNNNNNGTC 2 cut(s) 1021, 1042
EarI CTCTTC 1 cut(s) 741
EciI GGCGGA 3 cut(s) 854, 953, 1145
Ecl136II GAGCTC 1 cut(s) 337
Eco130I CCWWGG 1 cut(s) 39
Eco147I AGGCCT 1 cut(s) 452
Eco24I GRGCYC 3 cut(s) 203, 339, 490
Eco31I GGTCTC 4 cut(s) 49, 542, 1235, 1439
Eco47I GGWCC 4 cut(s) 117, 208, 255, 465
Eco53kI GAGCTC 1 cut(s) 337
Eco57I CTGAAG 3 cut(s) 482, 806, 1082
Eco72I CACGTG 1 cut(s) 931
Eco88I CYCGRG 4 cut(s) 203, 244, 686, 899
EcoICRI GAGCTC 1 cut(s) 337
EcoO109I RGGNCCY 6 cut(s) 199, 200, 208, 255, 465, 486
EcoT14I CCWWGG 1 cut(s) 39
EcoT38I GRGCYC 3 cut(s) 203, 339, 490
ErhI CCWWGG 1 cut(s) 39
Esp3I CGTCTC 2 cut(s) 177, 239
FaeI CATG 8 cut(s) 346, 358, 403, 542, 785, 1270, 1355, 1420
FaqI GGGAC 2 cut(s) 388, 1270
FatI CATG 8 cut(s) 342, 354, 399, 538, 781, 1266, 1351, 1416
FauI CCCGC 2 cut(s) 476, 945
FbaI TGATCA 1 cut(s) 12
FokI GGATG 5 cut(s) 17, 290, 443, 548, 916
FriOI GRGCYC 3 cut(s) 203, 339, 490
FspBI CTAG 1 cut(s) 1334
GlaI GCGC 1 cut(s) 988
GsuI CTGGAG 1 cut(s) 1103
HgaI GACGC 4 cut(s) 389, 1011, 1046, 1271
HhaI GCGC 1 cut(s) 989
Hin1I GRCGYC 4 cut(s) 150, 1022, 1038, 1263
Hin1II CATG 8 cut(s) 346, 358, 403, 542, 785, 1270, 1355, 1420
Hin6I GCGC 1 cut(s) 987
HinP1I GCGC 1 cut(s) 987
HinfI GANTC 6 cut(s) 409, 826, 851, 1085, 1103, 1455
HphI GGTGA 2 cut(s) 260, 1255
Hpy166II GTNNAC 2 cut(s) 1075, 1294
Hpy188I TCNGA 9 cut(s) 271, 379, 611, 658, 825, 856, 1036, 1285, 1454
Hpy188III TCNNGA 6 cut(s) 547, 584, 1008, 1139, 1232, 1409
Hpy8I GTNNAC 2 cut(s) 1075, 1294
Hpy99I CGWCG 6 cut(s) 152, 155, 374, 383, 1027, 1040
HpyAV CCTTC 7 cut(s) 427, 463, 478, 721, 1057, 1111, 1424
HpyCH4III ACNGT 4 cut(s) 233, 300, 578, 1189
HpyCH4IV ACGT 5 cut(s) 150, 372, 396, 930, 1002
HpyCH4V TGCA 6 cut(s) 73, 85, 561, 742, 1096, 1387
HpyF10VI GCNNNNNNNGC 9 cut(s) 79, 82, 527, 845, 949, 958, 986, 1087, 1365
HpyF3I CTNAG 4 cut(s) 108, 479, 639, 1459
HpySE526I ACGT 5 cut(s) 150, 372, 396, 930, 1002
Hsp92I GRCGYC 4 cut(s) 150, 1022, 1038, 1263
Hsp92II CATG 8 cut(s) 346, 358, 403, 542, 785, 1270, 1355, 1420
HspAI GCGC 1 cut(s) 987
KroI GCCGGC 1 cut(s) 734
KroNI GCCGGC 1 cut(s) 736
Ksp22I TGATCA 1 cut(s) 12
Kzo9I GATC 8 cut(s) 12, 413, 543, 555, 627, 658, 1375, 1462
LmnI GCTCC 4 cut(s) 334, 464, 940, 1174
Lsp1109I GCAGC 8 cut(s) 69, 85, 497, 958, 1080, 1102, 1371, 1429
LweI GCATC 4 cut(s) 570, 735, 1314, 1377
MaeI CTAG 1 cut(s) 1334
MaeII ACGT 5 cut(s) 150, 372, 396, 930, 1002
MaeIII GTNAC 2 cut(s) 1189, 1328
MalI GATC 8 cut(s) 14, 415, 545, 557, 629, 660, 1377, 1464
MbiI CCGCTC 3 cut(s) 483, 685, 943
MboI GATC 8 cut(s) 12, 413, 543, 555, 627, 658, 1375, 1462
MhlI GDGCHC 4 cut(s) 203, 339, 490, 1154
MluCI AATT 2 cut(s) 534, 1236
MlyI GAGTC 3 cut(s) 403, 1094, 1112
MmeI TCCRAC 8 cut(s) 168, 402, 597, 636, 854, 879, 1059, 1263
MroNI GCCGGC 1 cut(s) 734
MseI TTAA 1 cut(s) 1313
MspA1I CMGCKG 5 cut(s) 510, 865, 922, 949, 1093
MspR9I CCNGG 6 cut(s) 332, 444, 463, 836, 900, 901
MvnI CGCG 2 cut(s) 987, 989
MwoI GCNNNNNNNGC 9 cut(s) 79, 82, 527, 845, 949, 958, 986, 1087, 1365
NaeI GCCGGC 1 cut(s) 736
NciI CCSGG 6 cut(s) 332, 444, 463, 836, 900, 901
NdeII GATC 8 cut(s) 12, 413, 543, 555, 627, 658, 1375, 1462
NgoMIV GCCGGC 1 cut(s) 734
NlaIII CATG 8 cut(s) 346, 358, 403, 542, 785, 1270, 1355, 1420
NmeAIII GCCGAG 1 cut(s) 935
NmuCI GTSAC 1 cut(s) 1328
NspI RCATGY 1 cut(s) 785
PaeR7I CTCGAG 1 cut(s) 686
PceI AGGCCT 1 cut(s) 452
PcsI WCGNNNNNNNCGW 1 cut(s) 735
PdiI GCCGGC 1 cut(s) 736
PfeI GAWTC 3 cut(s) 826, 851, 1455
PflMI CCANNNNNTGG 1 cut(s) 132
PinAI ACCGGT 1 cut(s) 969
PleI GAGTC 3 cut(s) 403, 1093, 1111
PmaCI CACGTG 1 cut(s) 931
PmlI CACGTG 1 cut(s) 931
PpsI GAGTC 3 cut(s) 403, 1093, 1111
Ppu21I YACGTR 1 cut(s) 931
PpuMI RGGWCCY 3 cut(s) 208, 255, 465
PsiI TTATAA 1 cut(s) 795
Psp124BI GAGCTC 1 cut(s) 339
Psp5II RGGWCCY 3 cut(s) 208, 255, 465
PspCI CACGTG 1 cut(s) 931
PspOMI GGGCCC 2 cut(s) 199, 486
PspPPI RGGWCCY 3 cut(s) 208, 255, 465
PspXI VCTCGAGB 1 cut(s) 686
PstI CTGCAG 3 cut(s) 75, 87, 1098
PstNI CAGNNNCTG 1 cut(s) 82
PvuII CAGCTG 3 cut(s) 510, 865, 1093
SacI GAGCTC 1 cut(s) 339
SaqAI TTAA 1 cut(s) 1313
Sau3AI GATC 8 cut(s) 12, 413, 543, 555, 627, 658, 1375, 1462
SchI GAGTC 3 cut(s) 403, 1094, 1112
ScrFI CCNGG 6 cut(s) 332, 444, 463, 836, 900, 901
SduI GDGCHC 4 cut(s) 203, 339, 490, 1154
SfaNI GCATC 4 cut(s) 570, 735, 1314, 1377
SfcI CTRYAG 3 cut(s) 71, 83, 1094
Sfr274I CTCGAG 1 cut(s) 686
SinI GGWCC 4 cut(s) 117, 208, 255, 465
SlaI CTCGAG 1 cut(s) 686
SmaI CCCGGG 1 cut(s) 901
SmlI CTYRAG 3 cut(s) 287, 584, 686
SmoI CTYRAG 3 cut(s) 287, 584, 686
Sse9I AATT 2 cut(s) 534, 1236
SseBI AGGCCT 1 cut(s) 452
SspMI CTAG 1 cut(s) 1334
SstI GAGCTC 1 cut(s) 339
StuI AGGCCT 1 cut(s) 452
StyD4I CCNGG 6 cut(s) 330, 442, 461, 834, 898, 899
StyI CCWWGG 1 cut(s) 39
TaaI ACNGT 4 cut(s) 233, 300, 578, 1189
TaiI ACGT 5 cut(s) 153, 375, 399, 933, 1005
TaqI TCGA 8 cut(s) 153, 339, 412, 546, 687, 1007, 1106, 1233
TasI AATT 2 cut(s) 534, 1236
TauI GCSGC 3 cut(s) 165, 946, 952
TfiI GAWTC 3 cut(s) 826, 851, 1455
Tru1I TTAA 1 cut(s) 1313
Tru9I TTAA 1 cut(s) 1313
TseFI GTSAC 1 cut(s) 1328
TseI GCWGC 8 cut(s) 73, 82, 510, 946, 1090, 1093, 1384, 1442
Tsp45I GTSAC 1 cut(s) 1328
TspDTI ATGAA 6 cut(s) 18, 79, 343, 527, 682, 1433
TspGWI ACGGA 2 cut(s) 1159, 1274
TspMI CCCGGG 1 cut(s) 899
Van91I CCANNNNNTGG 1 cut(s) 132
VpaK11BI GGWCC 4 cut(s) 117, 208, 255, 465
XapI RAATTY 1 cut(s) 534
XceI RCATGY 1 cut(s) 785
XcmI CCANNNNNNNNNTGG 2 cut(s) 133, 1168
XhoI CTCGAG 1 cut(s) 686
XmaI CCCGGG 1 cut(s) 899
XspI CTAG 1 cut(s) 1334
ZraI GACGTC 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.