Rmu_sc0000441.1_g000071
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000441.1
OG0000212
Physical Location & Seq
Forward (+)
256918 .. 261831
4914 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000441.1_g000071.1.cds

Sequence Viewer

Length: 1146 bp
atgcatcagttcccagcttctgatgccatcttggcgcggcgcgtcagcgatgatctgggggtgagctcggggtcaagcggtagcctgcttggttgtgtcttcataggttactccattggtgggagttggtaccgctggcggtatcatgagcgattatgtgaaaacttccttcacgaaagttgtagagcgaatcgatacgagttcgtgcatatgcggaacacgaaaatcggagtccgtatgaagaagttatggccggaaaatcgcctccaacctcgtccgacaatatcttcgccgtccggccaccgttggccacgccaccggtcggaaactcttcgtctctcctccctcaactgtggtagcatcaaagcggtgattcttgagggcttttggagctcagtggacgtagatgcttttccccaaagtggcttgcaacgattcaaagcgtggagatcgaattttggaattgaaattctagggtttcaatcggccctcttccttccaaggttggtcggcggcggcactgccaattgtgatggtgatttgcagtggcttccggccacctcagggacagccttcggctccgagacctcaatctgtatgagtggggcccacgagcttcagttcaacaactgcgagagagccaaagaggcccaaatccacgggatcgagaccttgatctgcatcccaacttccaacggtgttcttgaaatgggttcatctggtttgatcagagagaactgggggttgatccagcaagccaagtcgttgttcgggtcggatcagcccaacctggaaacaagaccgctcgagttcatcaaccggaacttctccatttttgacatcggcatcattgccggcgtgcaagaagaggatcacagctcgtacaatgacgacaagaaacatgtttttggttctagcaagaagaacggagctccgaacctaaacgaaaatcttcgactgacccgacccggacccggcattccgacccgatcggaactcacagctccggcgacctcttccggtgaaaccaacccagaacgattcgcctccttgctccggtcgtctctgtggtggtctctatcgacgattctccttcacggaggcgctgcaagtcggcccagattgaggaaatcgggcccggcctga

Protein Analysis

381

Amino Acids

42.13

Weight (kDa)

9.05

Isoelectric Point (pI)

50.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 129
AccB1I GGYRCC 1 cut(s) 129
AccBSI CCGCTC 1 cut(s) 805
AccII CGCG 2 cut(s) 37, 42
AciI CCGC 9 cut(s) 37, 78, 133, 139, 214, 368, 513, 516, 803
AclWI GGATC 4 cut(s) 671, 742, 786, 879
AcoI YGGCCR 4 cut(s) 251, 298, 308, 555
AcsI RAATTY 2 cut(s) 454, 468
AcuI CTGAAG 1 cut(s) 602
AfaI GTAC 2 cut(s) 131, 884
AfiI CCNNNNNNNGG 7 cut(s) 120, 322, 422, 564, 974, 1056, 1125
AflIII ACRYGT 1 cut(s) 901
AgeI ACCGGT 1 cut(s) 318
AgsI TTSAA 5 cut(s) 439, 467, 482, 625, 707
AjnI CCWGG 1 cut(s) 789
AjuI GAANNNNNNNTTGG 2 cut(s) 752, 784
AluBI AGCT 7 cut(s) 17, 66, 393, 616, 879, 932, 1004
AluI AGCT 7 cut(s) 17, 66, 393, 616, 879, 932, 1004
Alw21I GWGCWC 3 cut(s) 68, 395, 934
Alw26I GTCTC 5 cut(s) 341, 578, 662, 1068, 1080
AlwI GGATC 4 cut(s) 671, 742, 786, 879
AlwNI CAGNNNCTG 1 cut(s) 20
Ama87I CYCGRG 2 cut(s) 67, 806
ApaI GGGCCC 2 cut(s) 610, 1139
ApeKI GCWGC 1 cut(s) 1106
ApoI RAATTY 2 cut(s) 454, 468
ArsI GACNNNNNNTTYG 2 cut(s) 271, 303
AsiGI ACCGGT 1 cut(s) 318
Asp700I GAANNNNTTC 2 cut(s) 330, 951
Asp718I GGTACC 1 cut(s) 129
AspLEI GCGC 3 cut(s) 37, 42, 1106
AspS9I GGNCC 8 cut(s) 487, 606, 607, 649, 971, 1116, 1135, 1136
AsuC2I CCSGG 3 cut(s) 969, 975, 1139
AsuHPI GGTGA 4 cut(s) 73, 382, 548, 1034
AvaI CYCGRG 2 cut(s) 67, 806
AvaII GGWCC 1 cut(s) 971
AxyI CCTNAGG 1 cut(s) 562
BaeGI GKGCMC 2 cut(s) 610, 1139
BalI TGGCCA 1 cut(s) 310
BanI GGYRCC 1 cut(s) 129
BanII GRGCYC 5 cut(s) 68, 395, 610, 934, 1139
BauI CACGAG 1 cut(s) 611
BbsI GAAGAC 1 cut(s) 91
Bbv12I GWGCWC 3 cut(s) 68, 395, 934
BbvI GCAGC 1 cut(s) 1093
BccI CCATC 2 cut(s) 35, 527
BceAI ACGGC 1 cut(s) 277
BciT130I CCWGG 1 cut(s) 791
BclI TGATCA 1 cut(s) 726
BcnI CCSGG 3 cut(s) 969, 975, 1139
BcoDI GTCTC 5 cut(s) 341, 578, 662, 1068, 1080
BfaI CTAG 2 cut(s) 473, 915
BfoI RGCGCY 1 cut(s) 1107
BglI GCCNNNNNGGC 2 cut(s) 32, 647
BisI GCNGC 4 cut(s) 38, 514, 517, 1107
BlsI GCNGC 4 cut(s) 39, 515, 518, 1108
Bme1390I CCNGG 4 cut(s) 791, 969, 975, 1139
Bme18I GGWCC 1 cut(s) 971
BmeT110I CYCGRG 2 cut(s) 67, 806
BmgT120I GGNCC 8 cut(s) 487, 606, 607, 649, 971, 1116, 1135, 1136
BmiI GGNNCC 6 cut(s) 131, 580, 607, 608, 973, 1137
BmrFI CCNGG 4 cut(s) 791, 969, 975, 1139
BmrI ACTGGG 1 cut(s) 748
BmsI GCATC 6 cut(s) 13, 13, 369, 397, 690, 855
BmuI ACTGGG 1 cut(s) 748
BpiI GAAGAC 1 cut(s) 91
BpuEI CTTGAG 1 cut(s) 398
BpuMI CCSGG 3 cut(s) 969, 975, 1139
Bsa29I ATCGAT 1 cut(s) 193
BsaBI GATNNNNATC 1 cut(s) 680
BsaI GGTCTC 3 cut(s) 578, 662, 1080
BsaJI CCNNGG 2 cut(s) 500, 658
BsaWI WCCGGW 4 cut(s) 318, 819, 1019, 1056
Bsc4I CCNNNNNNNGG 7 cut(s) 120, 322, 422, 564, 974, 1056, 1125
Bse118I RCCGGY 2 cut(s) 318, 854
Bse1I ACTGG 1 cut(s) 743
Bse21I CCTNAGG 1 cut(s) 562
Bse3DI GCAATG 1 cut(s) 849
Bse8I GATNNNNATC 1 cut(s) 680
BseBI CCWGG 1 cut(s) 791
BseCI ATCGAT 1 cut(s) 193
BseDI CCNNGG 2 cut(s) 500, 658
BseGI GGATG 1 cut(s) 681
BseJI GATNNNNATC 1 cut(s) 680
BseLI CCNNNNNNNGG 7 cut(s) 120, 322, 422, 564, 974, 1056, 1125
BseMI GCAATG 1 cut(s) 849
BseMII CTCAG 2 cut(s) 408, 576
BseNI ACTGG 1 cut(s) 743
BseRI GAGGAG 1 cut(s) 331
BseSI GKGCMC 2 cut(s) 610, 1139
BseXI GCAGC 1 cut(s) 1093
BseYI CCCAGC 1 cut(s) 13
Bsh1236I CGCG 2 cut(s) 37, 42
Bsh1285I CGRYCG 3 cut(s) 323, 992, 1061
BshNI GGYRCC 1 cut(s) 129
BshTI ACCGGT 1 cut(s) 318
BshVI ATCGAT 1 cut(s) 193
BsiEI CGRYCG 3 cut(s) 323, 992, 1061
BsiHKAI GWGCWC 3 cut(s) 68, 395, 934
BsiHKCI CYCGRG 2 cut(s) 67, 806
BslFI GGGAC 1 cut(s) 580
BslI CCNNNNNNNGG 7 cut(s) 120, 322, 422, 564, 974, 1056, 1125
BsmAI GTCTC 5 cut(s) 341, 578, 662, 1068, 1080
BsmBI CGTCTC 2 cut(s) 341, 1068
BsmFI GGGAC 1 cut(s) 580
BsmI GAATGC 1 cut(s) 978
Bso31I GGTCTC 3 cut(s) 578, 662, 1080
BsoBI CYCGRG 2 cut(s) 67, 806
Bsp120I GGGCCC 2 cut(s) 606, 1135
Bsp1286I GDGCHC 5 cut(s) 68, 395, 610, 934, 1139
Bsp143I GATC 9 cut(s) 52, 449, 663, 675, 726, 747, 778, 871, 989
BspACI CCGC 9 cut(s) 37, 78, 133, 139, 214, 368, 513, 516, 803
BspCNI CTCAG 2 cut(s) 407, 575
BspDI ATCGAT 1 cut(s) 193
BspFNI CGCG 2 cut(s) 37, 42
BspHI TCATGA 1 cut(s) 145
BspLI GGNNCC 6 cut(s) 131, 580, 607, 608, 973, 1137
BspPI GGATC 4 cut(s) 671, 742, 786, 879
BspT107I GGYRCC 1 cut(s) 129
BspTNI GGTCTC 3 cut(s) 578, 662, 1080
BsrBI CCGCTC 1 cut(s) 805
BsrDI GCAATG 1 cut(s) 849
BsrFI RCCGGY 2 cut(s) 318, 854
BsrI ACTGG 1 cut(s) 743
BssAI RCCGGY 2 cut(s) 318, 854
BssECI CCNNGG 2 cut(s) 500, 658
BssMI GATC 9 cut(s) 52, 449, 663, 675, 726, 747, 778, 871, 989
BssSI CACGAG 1 cut(s) 611
BssT1I CCWWGG 1 cut(s) 500
Bst2BI CACGAG 1 cut(s) 611
Bst2UI CCWGG 1 cut(s) 791
Bst4CI ACNGT 3 cut(s) 305, 353, 698
Bst6I CTCTTC 4 cut(s) 336, 497, 861, 1021
BstC8I GCNNGC 6 cut(s) 86, 137, 428, 756, 856, 860
BstDEI CTNAG 2 cut(s) 394, 562
BstDSI CCRYGG 1 cut(s) 658
BstF5I GGATG 1 cut(s) 681
BstFNI CGCG 2 cut(s) 37, 42
BstH2I RGCGCY 1 cut(s) 1107
BstHHI GCGC 3 cut(s) 37, 42, 1106
BstKTI GATC 9 cut(s) 55, 452, 666, 678, 729, 750, 781, 874, 992
BstMAI GTCTC 5 cut(s) 341, 578, 662, 1068, 1080
BstMBI GATC 9 cut(s) 52, 449, 663, 675, 726, 747, 778, 871, 989
BstMCI CGRYCG 3 cut(s) 323, 992, 1061
BstMWI GCNNNNNNNGC 4 cut(s) 23, 32, 390, 647
BstNI CCWGG 1 cut(s) 791
BstNSI RCATGY 1 cut(s) 905
BstSCI CCNGG 4 cut(s) 789, 967, 973, 1137
BstSLI GKGCMC 2 cut(s) 610, 1139
BstUI CGCG 2 cut(s) 37, 42
BstV1I GCAGC 1 cut(s) 1093
BstV2I GAAGAC 1 cut(s) 91
Bsu15I ATCGAT 1 cut(s) 193
Bsu36I CCTNAGG 1 cut(s) 562
BsuTUI ATCGAT 1 cut(s) 193
BtgI CCRYGG 1 cut(s) 658
BtgZI GCGATG 1 cut(s) 63
BtsCI GGATG 1 cut(s) 681
BtsI GCAGTG 2 cut(s) 519, 551
BtsIMutI CAGTG 3 cut(s) 402, 519, 551
Cac8I GCNNGC 6 cut(s) 86, 137, 428, 756, 856, 860
CaiI CAGNNNCTG 1 cut(s) 20
CciI TCATGA 1 cut(s) 145
CfoI GCGC 3 cut(s) 37, 42, 1106
Cfr10I RCCGGY 2 cut(s) 318, 854
Cfr13I GGNCC 8 cut(s) 487, 606, 607, 649, 971, 1116, 1135, 1136
ClaI ATCGAT 1 cut(s) 193
CseI GACGC 1 cut(s) 31
Csp6I GTAC 2 cut(s) 130, 883
CspAI ACCGGT 1 cut(s) 318
CviAII CATG 2 cut(s) 146, 902
CviQI GTAC 2 cut(s) 130, 883
DdeI CTNAG 2 cut(s) 394, 562
DpnI GATC 9 cut(s) 54, 451, 665, 677, 728, 749, 780, 873, 991
DpnII GATC 9 cut(s) 52, 449, 663, 675, 726, 747, 778, 871, 989
EaeI YGGCCR 4 cut(s) 251, 298, 308, 555
Eam1104I CTCTTC 4 cut(s) 336, 497, 861, 1021
EarI CTCTTC 4 cut(s) 336, 497, 861, 1021
Ecl136II GAGCTC 3 cut(s) 66, 393, 932
Eco130I CCWWGG 1 cut(s) 500
Eco24I GRGCYC 5 cut(s) 68, 395, 610, 934, 1139
Eco31I GGTCTC 3 cut(s) 578, 662, 1080
Eco47I GGWCC 1 cut(s) 971
Eco53kI GAGCTC 3 cut(s) 66, 393, 932
Eco57I CTGAAG 1 cut(s) 602
Eco81I CCTNAGG 1 cut(s) 562
Eco88I CYCGRG 2 cut(s) 67, 806
EcoICRI GAGCTC 3 cut(s) 66, 393, 932
EcoO109I RGGNCCY 1 cut(s) 606
EcoRII CCWGG 1 cut(s) 789
EcoT14I CCWWGG 1 cut(s) 500
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 5 cut(s) 68, 395, 610, 934, 1139
ErhI CCWWGG 1 cut(s) 500
Esp3I CGTCTC 2 cut(s) 341, 1068
FaeI CATG 2 cut(s) 149, 905
FaiI YATR 9 cut(s) 104, 147, 157, 210, 212, 239, 250, 599, 903
FaqI GGGAC 1 cut(s) 580
FatI CATG 2 cut(s) 145, 901
FauNDI CATATG 1 cut(s) 210
FbaI TGATCA 1 cut(s) 726
Fnu4HI GCNGC 4 cut(s) 38, 514, 517, 1107
FokI GGATG 1 cut(s) 668
FriOI GRGCYC 5 cut(s) 68, 395, 610, 934, 1139
Fsp4HI GCNGC 4 cut(s) 38, 514, 517, 1107
FspBI CTAG 2 cut(s) 473, 915
GlaI GCGC 3 cut(s) 36, 41, 1105
GluI GCNGC 4 cut(s) 38, 514, 517, 1107
GsaI CCCAGC 1 cut(s) 17
HaeII RGCGCY 1 cut(s) 1107
HgaI GACGC 1 cut(s) 31
HhaI GCGC 3 cut(s) 37, 42, 1106
Hin1II CATG 2 cut(s) 149, 905
Hin6I GCGC 3 cut(s) 35, 40, 1104
HinP1I GCGC 3 cut(s) 35, 40, 1104
HinfI GANTC 6 cut(s) 190, 231, 373, 435, 1041, 1087
HphI GGTGA 4 cut(s) 73, 382, 548, 1034
Hpy166II GTNNAC 1 cut(s) 400
Hpy188III TCNNGA 5 cut(s) 146, 173, 377, 667, 704
Hpy8I GTNNAC 1 cut(s) 400
Hpy99I CGWCG 1 cut(s) 1087
HpyAV CCTTC 4 cut(s) 179, 506, 583, 1103
HpyCH4III ACNGT 3 cut(s) 305, 353, 698
HpyCH4IV ACGT 1 cut(s) 402
HpyCH4V TGCA 7 cut(s) 4, 208, 430, 544, 681, 862, 1109
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 32, 390, 647
HpyF3I CTNAG 2 cut(s) 394, 562
HpySE526I ACGT 1 cut(s) 402
Hsp92II CATG 2 cut(s) 149, 905
HspAI GCGC 3 cut(s) 35, 40, 1104
KpnI GGTACC 1 cut(s) 133
KroI GCCGGC 1 cut(s) 854
KroNI GCCGGC 1 cut(s) 856
Ksp22I TGATCA 1 cut(s) 726
Kzo9I GATC 9 cut(s) 52, 449, 663, 675, 726, 747, 778, 871, 989
LmnI GCTCC 6 cut(s) 390, 584, 929, 937, 1009, 1059
Lsp1109I GCAGC 1 cut(s) 1093
LweI GCATC 6 cut(s) 13, 13, 369, 397, 690, 855
MaeI CTAG 2 cut(s) 473, 915
MaeII ACGT 1 cut(s) 402
MaeIII GTNAC 1 cut(s) 107
MalI GATC 9 cut(s) 54, 451, 665, 677, 728, 749, 780, 873, 991
MbiI CCGCTC 1 cut(s) 805
MboI GATC 9 cut(s) 52, 449, 663, 675, 726, 747, 778, 871, 989
MboII GAAGA 9 cut(s) 91, 253, 279, 323, 484, 878, 934, 944, 1008
MfeI CAATTG 1 cut(s) 526
MhlI GDGCHC 5 cut(s) 68, 395, 610, 934, 1139
MlsI TGGCCA 1 cut(s) 310
MluCI AATT 4 cut(s) 454, 462, 468, 526
MluNI TGGCCA 1 cut(s) 310
MlyI GAGTC 1 cut(s) 240
MmeI TCCRAC 6 cut(s) 292, 302, 303, 717, 756, 1007
Mox20I TGGCCA 1 cut(s) 310
Mph1103I ATGCAT 1 cut(s) 6
MroNI GCCGGC 1 cut(s) 854
MroXI GAANNNNTTC 2 cut(s) 330, 951
MscI TGGCCA 1 cut(s) 310
Msp20I TGGCCA 1 cut(s) 310
MspA1I CMGCKG 1 cut(s) 135
MspR9I CCNGG 4 cut(s) 791, 969, 975, 1139
MteI GCGCNGCGC 1 cut(s) 38
MunI CAATTG 1 cut(s) 526
Mva1269I GAATGC 1 cut(s) 978
MvaI CCWGG 1 cut(s) 791
MvnI CGCG 2 cut(s) 37, 42
MwoI GCNNNNNNNGC 4 cut(s) 23, 32, 390, 647
NaeI GCCGGC 1 cut(s) 856
NciI CCSGG 3 cut(s) 969, 975, 1139
NdeI CATATG 1 cut(s) 210
NdeII GATC 9 cut(s) 52, 449, 663, 675, 726, 747, 778, 871, 989
NgoMIV GCCGGC 1 cut(s) 854
NlaIII CATG 2 cut(s) 149, 905
NlaIV GGNNCC 6 cut(s) 131, 580, 607, 608, 973, 1137
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 905
PaeR7I CTCGAG 1 cut(s) 806
PagI TCATGA 1 cut(s) 145
PciI ACATGT 1 cut(s) 901
PcsI WCGNNNNNNNCGW 1 cut(s) 961
PctI GAATGC 1 cut(s) 978
PdiI GCCGGC 1 cut(s) 856
PdmI GAANNNNTTC 2 cut(s) 330, 951
PfeI GAWTC 5 cut(s) 190, 373, 435, 1041, 1087
PinAI ACCGGT 1 cut(s) 318
PkrI GCNGC 4 cut(s) 39, 515, 518, 1108
Ple19I CGATCG 1 cut(s) 992
PleI GAGTC 1 cut(s) 239
PpsI GAGTC 1 cut(s) 239
PscI ACATGT 1 cut(s) 901
Psp124BI GAGCTC 3 cut(s) 68, 395, 934
Psp6I CCWGG 1 cut(s) 789
PspFI CCCAGC 1 cut(s) 13
PspGI CCWGG 1 cut(s) 789
PspN4I GGNNCC 6 cut(s) 131, 580, 607, 608, 973, 1137
PspOMI GGGCCC 2 cut(s) 606, 1135
PspPI GGNCC 8 cut(s) 487, 606, 607, 649, 971, 1116, 1135, 1136
PspXI VCTCGAGB 1 cut(s) 806
PstNI CAGNNNCTG 1 cut(s) 20
PvuI CGATCG 1 cut(s) 992
RsaI GTAC 2 cut(s) 131, 884
RsaNI GTAC 2 cut(s) 130, 883
SacI GAGCTC 3 cut(s) 68, 395, 934
SatI GCNGC 4 cut(s) 38, 514, 517, 1107
Sau3AI GATC 9 cut(s) 52, 449, 663, 675, 726, 747, 778, 871, 989
Sau96I GGNCC 8 cut(s) 487, 606, 607, 649, 971, 1116, 1135, 1136
SchI GAGTC 1 cut(s) 240
ScrFI CCNGG 4 cut(s) 791, 969, 975, 1139
SduI GDGCHC 5 cut(s) 68, 395, 610, 934, 1139
SfaNI GCATC 6 cut(s) 13, 13, 369, 397, 690, 855
Sfr274I CTCGAG 1 cut(s) 806
SinI GGWCC 1 cut(s) 971
SlaI CTCGAG 1 cut(s) 806
SmlI CTYRAG 2 cut(s) 377, 806
SmoI CTYRAG 2 cut(s) 377, 806
Sse9I AATT 4 cut(s) 454, 462, 468, 526
SsiI CCGC 9 cut(s) 37, 78, 133, 139, 214, 368, 513, 516, 803
SspMI CTAG 2 cut(s) 473, 915
SstI GAGCTC 3 cut(s) 68, 395, 934
StyD4I CCNGG 4 cut(s) 789, 967, 973, 1137
StyI CCWWGG 1 cut(s) 500
TaaI ACNGT 3 cut(s) 305, 353, 698
TaiI ACGT 1 cut(s) 405
TaqI TCGA 6 cut(s) 193, 452, 666, 807, 955, 1082
TasI AATT 4 cut(s) 454, 462, 468, 526
TauI GCSGC 3 cut(s) 40, 516, 519
TfiI GAWTC 5 cut(s) 190, 373, 435, 1041, 1087
TscAI CASTG 3 cut(s) 402, 526, 551
TseI GCWGC 1 cut(s) 1106
TspDTI ATGAA 4 cut(s) 91, 254, 705, 802
TspGWI ACGGA 3 cut(s) 224, 942, 1113
TspRI CASTG 3 cut(s) 402, 526, 551
VpaK11BI GGWCC 1 cut(s) 971
XapI RAATTY 2 cut(s) 454, 468
XceI RCATGY 1 cut(s) 905
XhoI CTCGAG 1 cut(s) 806
XmnI GAANNNNTTC 2 cut(s) 330, 951
XspI CTAG 2 cut(s) 473, 915
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.