RLG00000027784
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000212
Physical Location & Seq
Reverse (-)
15145870 .. 15147324
1455 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027784

Sequence Viewer

Length: 1062 bp
ATGGATGATCTAATCATCTCTCCTTCTTCGTCTTCTTCCTTGGTCTCACTCCCACAAGAACCAACTCTCCAACAGAGGCTGCAGTTCATACTACAAAGCCAGCCGGAGTTGTGGTCTTACGCCATTTTCTGGCAGGCCTCAAACGACGTCGAAAATGGCCGCCTCCTTCTCGGTTGGGGAGACGGTCATTTTCAGGGACCCAAGAACCCGTCACCCAGCCACAACAACAACAACAGCCTCTCGTCCTCGGGAGGAGCGCCACACTCCGACAGAAGAAAAATCCTAAAGGGCATACAGTCCATCCTCAACGACAACAACCCGGAGCTCGACATGGACAACTTCATGGCCCTAAACGGCGATGTCTCGGACGCCGAGTGGTTCTATGTCATGTCCAAGAAGAAGAACGGAGCTCCGAACCCAAACCCGGACTTCGCAGATTCCGACTGCCAGATGAAAAGAGCGCCGAAGAAACGGGGCCGGAAACCCGGGCTGGGCCGAGACACGCCGCTTAACCACGTGGAGGCGGAGAGGCAGCGGCGGGAGAAGCTCAACCACCGGTTCTACGCGCTACGCGCGGTGGTGCCGAACGTGTCGAGAATGGACAAGGCGTCGCTGCTGTCCGACGCCGTGTCGTACATCAACGACCTGAAGGCCAAGGTGGACGAGCTGGAGTCGAAGCTGCAGAGGGAGTCAAAGAAAGTCAAAGTGGAAATGGCGGACAACCAGGACAACCAGAGCACCACCACCACCGCCTCCGTGGAGCAAACACAAACAGTAAGGCCTGACATCAACAACACCAACAACGGGTCGGGTCTCGAGATTGAGGTGAAGATAGTGGGCACGGACGCCATGATTAGGGTGCAGTCGGAGAATGTGAACTACCCATCTGCGAGGTTAATGACGGCGATGCGTGACTTAGAGTTCCGCATCCACCATGCGAGCTTGTCAAGCATCAATGATCTTATGCTCCAAGATATTGTGGTCAAGGTTCCTGATAATATGAGAAGCGAAGAAGGTCTCAAAGCTGCTCTACTCGGAATATTAGATCAGAACCAAGCTTAA

Protein Analysis

354

Amino Acids

39.4

Weight (kDa)

6.02

Isoelectric Point (pI)

47.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 23 - 132 1.7e-19 bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH PF00010 171 - 217 5.7e-12 Helix-loop-helix DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 150
AccB1I GGYRCC 1 cut(s) 580
AccB7I CCANNNNNTGG 1 cut(s) 129
AccII CGCG 3 cut(s) 566, 573, 575
AciI CCGC 9 cut(s) 160, 506, 524, 535, 538, 575, 716, 750, 925
AcoI YGGCCR 1 cut(s) 157
AcuI CTGAAG 1 cut(s) 668
AcvI CACGTG 1 cut(s) 517
AcyI GRCGYC 5 cut(s) 147, 369, 608, 624, 846
AfaI GTAC 1 cut(s) 635
AfiI CCNNNNNNNGG 6 cut(s) 129, 424, 491, 520, 804, 855
AflIII ACRYGT 1 cut(s) 588
AgeI ACCGGT 1 cut(s) 555
AhdI GACNNNNNGTC 2 cut(s) 607, 628
AjnI CCWGG 1 cut(s) 723
AloI GAACNNNNNNTCC 2 cut(s) 51, 83
AluBI AGCT 8 cut(s) 325, 410, 547, 667, 679, 942, 1025, 1058
AluI AGCT 8 cut(s) 325, 410, 547, 667, 679, 942, 1025, 1058
Alw21I GWGCWC 3 cut(s) 327, 412, 740
Alw26I GTCTC 6 cut(s) 49, 174, 367, 492, 818, 1022
AlwNI CAGNNNCTG 1 cut(s) 79
Ama87I CYCGRG 3 cut(s) 247, 485, 815
AoxI GGCC 7 cut(s) 135, 157, 345, 475, 493, 651, 779
ApeKI GCWGC 5 cut(s) 79, 532, 613, 679, 1025
AsiGI ACCGGT 1 cut(s) 555
AspLEI GCGC 4 cut(s) 259, 463, 568, 575
AspS9I GGNCC 4 cut(s) 197, 346, 475, 493
AsuC2I CCSGG 4 cut(s) 320, 425, 486, 487
AsuHPI GGTGA 2 cut(s) 204, 838
AvaI CYCGRG 3 cut(s) 247, 485, 815
AvaII GGWCC 1 cut(s) 197
BaeGI GKGCMC 1 cut(s) 842
BanI GGYRCC 1 cut(s) 580
BanII GRGCYC 2 cut(s) 327, 412
BbrPI CACGTG 1 cut(s) 517
BbsI GAAGAC 1 cut(s) 24
Bbv12I GWGCWC 3 cut(s) 327, 412, 740
BbvI GCAGC 5 cut(s) 66, 544, 600, 666, 1012
BccI CCATC 2 cut(s) 308, 892
BceAI ACGGC 3 cut(s) 370, 611, 918
BciT130I CCWGG 1 cut(s) 725
BcnI CCSGG 4 cut(s) 320, 425, 486, 487
BcoDI GTCTC 6 cut(s) 49, 174, 367, 492, 818, 1022
BfmI CTRYAG 2 cut(s) 80, 680
BfoI RGCGCY 2 cut(s) 260, 464
BisI GCNGC 8 cut(s) 80, 160, 506, 533, 536, 614, 680, 1026
BlsI GCNGC 8 cut(s) 81, 161, 507, 534, 537, 615, 681, 1027
Bme1390I CCNGG 5 cut(s) 320, 425, 486, 487, 725
Bme18I GGWCC 1 cut(s) 197
BmeRI GACNNNNNGTC 2 cut(s) 607, 628
BmeT110I CYCGRG 3 cut(s) 247, 485, 815
BmgT120I GGNCC 4 cut(s) 197, 346, 475, 493
BmiI GGNNCC 5 cut(s) 198, 199, 476, 582, 990
BmrFI CCNGG 5 cut(s) 320, 425, 486, 487, 725
BmsI GCATC 3 cut(s) 897, 936, 960
BpiI GAAGAC 1 cut(s) 24
BpmI CTGGAG 1 cut(s) 689
BpuMI CCSGG 4 cut(s) 320, 425, 486, 487
BsaAI YACGTR 1 cut(s) 517
BsaHI GRCGYC 5 cut(s) 147, 369, 608, 624, 846
BsaI GGTCTC 3 cut(s) 49, 818, 1022
BsaJI CCNNGG 5 cut(s) 39, 246, 485, 654, 756
BsaWI WCCGGW 1 cut(s) 555
BsaXI ACNNNNNCTCC 4 cut(s) 51, 81, 98, 128
Bsc4I CCNNNNNNNGG 6 cut(s) 129, 424, 491, 520, 804, 855
Bse118I RCCGGY 1 cut(s) 555
BseBI CCWGG 1 cut(s) 725
BseDI CCNNGG 5 cut(s) 39, 246, 485, 654, 756
BseGI GGATG 3 cut(s) 10, 300, 927
BseLI CCNNNNNNNGG 6 cut(s) 129, 424, 491, 520, 804, 855
BseRI GAGGAG 1 cut(s) 267
BseSI GKGCMC 1 cut(s) 842
BseXI GCAGC 5 cut(s) 66, 544, 600, 666, 1012
BseYI CCCAGC 2 cut(s) 215, 490
BsgI GTGCAG 1 cut(s) 881
Bsh1236I CGCG 3 cut(s) 566, 573, 575
BshFI GGCC 7 cut(s) 137, 159, 347, 477, 495, 653, 781
BshNI GGYRCC 1 cut(s) 580
BshTI ACCGGT 1 cut(s) 555
BsiHKAI GWGCWC 3 cut(s) 327, 412, 740
BsiHKCI CYCGRG 3 cut(s) 247, 485, 815
BsiSI CCGG 6 cut(s) 104, 320, 425, 478, 486, 556
BslFI GGGAC 1 cut(s) 210
BslI CCNNNNNNNGG 6 cut(s) 129, 424, 491, 520, 804, 855
BsmAI GTCTC 6 cut(s) 49, 174, 367, 492, 818, 1022
BsmBI CGTCTC 1 cut(s) 174
BsmFI GGGAC 1 cut(s) 210
BsnI GGCC 7 cut(s) 137, 159, 347, 477, 495, 653, 781
Bso31I GGTCTC 3 cut(s) 49, 818, 1022
BsoBI CYCGRG 3 cut(s) 247, 485, 815
Bsp1286I GDGCHC 4 cut(s) 327, 412, 740, 842
Bsp143I GATC 3 cut(s) 7, 958, 1045
BspACI CCGC 9 cut(s) 160, 506, 524, 535, 538, 575, 716, 750, 925
BspANI GGCC 7 cut(s) 137, 159, 347, 477, 495, 653, 781
BspFNI CGCG 3 cut(s) 566, 573, 575
BspLI GGNNCC 5 cut(s) 198, 199, 476, 582, 990
BspMAI CTGCAG 2 cut(s) 84, 684
BspT107I GGYRCC 1 cut(s) 580
BspTNI GGTCTC 3 cut(s) 49, 818, 1022
BsrFI RCCGGY 1 cut(s) 555
BssAI RCCGGY 1 cut(s) 555
BssECI CCNNGG 5 cut(s) 39, 246, 485, 654, 756
BssMI GATC 3 cut(s) 7, 958, 1045
BssNI GRCGYC 5 cut(s) 147, 369, 608, 624, 846
BssT1I CCWWGG 2 cut(s) 39, 654
Bst2UI CCWGG 1 cut(s) 725
Bst4CI ACNGT 3 cut(s) 185, 297, 775
BstACI GRCGYC 5 cut(s) 147, 369, 608, 624, 846
BstBAI YACGTR 1 cut(s) 517
BstC8I GCNNGC 3 cut(s) 101, 135, 940
BstDEI CTNAG 1 cut(s) 916
BstDSI CCRYGG 1 cut(s) 756
BstF5I GGATG 3 cut(s) 10, 300, 927
BstFNI CGCG 3 cut(s) 566, 573, 575
BstH2I RGCGCY 2 cut(s) 260, 464
BstHHI GCGC 4 cut(s) 259, 463, 568, 575
BstKTI GATC 3 cut(s) 10, 961, 1048
BstMAI GTCTC 6 cut(s) 49, 174, 367, 492, 818, 1022
BstMBI GATC 3 cut(s) 7, 958, 1045
BstMWI GCNNNNNNNGC 3 cut(s) 544, 572, 948
BstNI CCWGG 1 cut(s) 725
BstSCI CCNGG 5 cut(s) 318, 423, 484, 485, 723
BstSFI CTRYAG 2 cut(s) 80, 680
BstSLI GKGCMC 1 cut(s) 842
BstUI CGCG 3 cut(s) 566, 573, 575
BstV1I GCAGC 5 cut(s) 66, 544, 600, 666, 1012
BstV2I GAAGAC 1 cut(s) 24
BsuRI GGCC 7 cut(s) 137, 159, 347, 477, 495, 653, 781
BtgI CCRYGG 1 cut(s) 756
BtgZI GCGATG 2 cut(s) 372, 920
BtsCI GGATG 3 cut(s) 10, 300, 927
Cac8I GCNNGC 3 cut(s) 101, 135, 940
CaiI CAGNNNCTG 1 cut(s) 79
CfoI GCGC 4 cut(s) 259, 463, 568, 575
Cfr10I RCCGGY 1 cut(s) 555
Cfr13I GGNCC 4 cut(s) 197, 346, 475, 493
Cfr9I CCCGGG 1 cut(s) 485
CseI GACGC 4 cut(s) 377, 597, 632, 854
Csp6I GTAC 1 cut(s) 634
CspAI ACCGGT 1 cut(s) 555
CviAII CATG 5 cut(s) 331, 343, 388, 850, 935
CviQI GTAC 1 cut(s) 634
DdeI CTNAG 1 cut(s) 916
DpnI GATC 3 cut(s) 9, 960, 1047
DpnII GATC 3 cut(s) 7, 958, 1045
DriI GACNNNNNGTC 2 cut(s) 607, 628
EaeI YGGCCR 1 cut(s) 157
Eam1105I GACNNNNNGTC 2 cut(s) 607, 628
EciI GGCGGA 2 cut(s) 539, 731
Ecl136II GAGCTC 2 cut(s) 325, 410
Eco130I CCWWGG 2 cut(s) 39, 654
Eco147I AGGCCT 2 cut(s) 137, 781
Eco24I GRGCYC 2 cut(s) 327, 412
Eco31I GGTCTC 3 cut(s) 49, 818, 1022
Eco47I GGWCC 1 cut(s) 197
Eco53kI GAGCTC 2 cut(s) 325, 410
Eco57I CTGAAG 1 cut(s) 668
Eco72I CACGTG 1 cut(s) 517
Eco88I CYCGRG 3 cut(s) 247, 485, 815
EcoICRI GAGCTC 2 cut(s) 325, 410
EcoO109I RGGNCCY 1 cut(s) 197
EcoRII CCWGG 1 cut(s) 723
EcoT14I CCWWGG 2 cut(s) 39, 654
EcoT38I GRGCYC 2 cut(s) 327, 412
ErhI CCWWGG 2 cut(s) 39, 654
Esp3I CGTCTC 1 cut(s) 174
FaeI CATG 5 cut(s) 334, 346, 391, 853, 938
FaqI GGGAC 1 cut(s) 210
FatI CATG 5 cut(s) 330, 342, 387, 849, 934
FauI CCCGC 1 cut(s) 531
Fnu4HI GCNGC 8 cut(s) 80, 160, 506, 533, 536, 614, 680, 1026
FokI GGATG 3 cut(s) 17, 287, 914
FriOI GRGCYC 2 cut(s) 327, 412
Fsp4HI GCNGC 8 cut(s) 80, 160, 506, 533, 536, 614, 680, 1026
GlaI GCGC 4 cut(s) 258, 462, 567, 574
GluI GCNGC 8 cut(s) 80, 160, 506, 533, 536, 614, 680, 1026
GsaI CCCAGC 2 cut(s) 219, 494
GsuI CTGGAG 1 cut(s) 689
HaeII RGCGCY 2 cut(s) 260, 464
HaeIII GGCC 7 cut(s) 137, 159, 347, 477, 495, 653, 781
HapII CCGG 6 cut(s) 104, 320, 425, 478, 486, 556
HgaI GACGC 4 cut(s) 377, 597, 632, 854
HhaI GCGC 4 cut(s) 259, 463, 568, 575
Hin1I GRCGYC 5 cut(s) 147, 369, 608, 624, 846
Hin1II CATG 5 cut(s) 334, 346, 391, 853, 938
Hin6I GCGC 4 cut(s) 257, 461, 566, 573
HinP1I GCGC 4 cut(s) 257, 461, 566, 573
HindIII AAGCTT 1 cut(s) 1056
HinfI GANTC 3 cut(s) 437, 671, 689
HpaII CCGG 6 cut(s) 104, 320, 425, 478, 486, 556
HphI GGTGA 2 cut(s) 204, 838
Hpy166II GTNNAC 2 cut(s) 661, 877
Hpy188I TCNGA 8 cut(s) 268, 367, 414, 442, 622, 868, 1037, 1050
Hpy188III TCNNGA 5 cut(s) 249, 594, 815, 817, 992
Hpy8I GTNNAC 2 cut(s) 661, 877
Hpy99I CGWCG 4 cut(s) 149, 152, 613, 626
HpyAV CCTTC 4 cut(s) 33, 176, 643, 1007
HpyCH4III ACNGT 3 cut(s) 185, 297, 775
HpyCH4IV ACGT 3 cut(s) 147, 516, 588
HpyCH4V TGCA 3 cut(s) 82, 682, 862
HpyF10VI GCNNNNNNNGC 3 cut(s) 544, 572, 948
HpyF3I CTNAG 1 cut(s) 916
HpySE526I ACGT 3 cut(s) 147, 516, 588
Hsp92I GRCGYC 5 cut(s) 147, 369, 608, 624, 846
Hsp92II CATG 5 cut(s) 334, 346, 391, 853, 938
HspAI GCGC 4 cut(s) 257, 461, 566, 573
KflI GGGWCCC 1 cut(s) 197
Kzo9I GATC 3 cut(s) 7, 958, 1045
LmnI GCTCC 6 cut(s) 254, 322, 407, 415, 760, 972
Lsp1109I GCAGC 5 cut(s) 66, 544, 600, 666, 1012
LweI GCATC 3 cut(s) 897, 936, 960
MaeII ACGT 3 cut(s) 147, 516, 588
MaeIII GTNAC 2 cut(s) 210, 911
MalI GATC 3 cut(s) 9, 960, 1047
MboI GATC 3 cut(s) 7, 958, 1045
MboII GAAGA 9 cut(s) 18, 24, 27, 285, 409, 412, 478, 841, 1022
MhlI GDGCHC 4 cut(s) 327, 412, 740, 842
MlyI GAGTC 2 cut(s) 680, 698
MmeI TCCRAC 5 cut(s) 94, 291, 465, 645, 846
MseI TTAA 3 cut(s) 510, 896, 1060
MspA1I CMGCKG 1 cut(s) 535
MspI CCGG 6 cut(s) 104, 320, 425, 478, 486, 556
MspR9I CCNGG 5 cut(s) 320, 425, 486, 487, 725
MvaI CCWGG 1 cut(s) 725
MvnI CGCG 3 cut(s) 566, 573, 575
MwoI GCNNNNNNNGC 3 cut(s) 544, 572, 948
NciI CCSGG 4 cut(s) 320, 425, 486, 487
NdeII GATC 3 cut(s) 7, 958, 1045
NlaIII CATG 5 cut(s) 334, 346, 391, 853, 938
NlaIV GGNNCC 5 cut(s) 198, 199, 476, 582, 990
NmeAIII GCCGAG 2 cut(s) 397, 521
NmuCI GTSAC 2 cut(s) 210, 911
PaeR7I CTCGAG 1 cut(s) 815
PceI AGGCCT 2 cut(s) 137, 781
PcsI WCGNNNNNNNCGW 1 cut(s) 438
PfeI GAWTC 1 cut(s) 437
PflMI CCANNNNNTGG 1 cut(s) 129
PinAI ACCGGT 1 cut(s) 555
PkrI GCNGC 8 cut(s) 81, 161, 507, 534, 537, 615, 681, 1027
PleI GAGTC 2 cut(s) 679, 697
PmaCI CACGTG 1 cut(s) 517
PmlI CACGTG 1 cut(s) 517
PpsI GAGTC 2 cut(s) 679, 697
Ppu21I YACGTR 1 cut(s) 517
PpuMI RGGWCCY 1 cut(s) 197
Psp124BI GAGCTC 2 cut(s) 327, 412
Psp5II RGGWCCY 1 cut(s) 197
Psp6I CCWGG 1 cut(s) 723
PspCI CACGTG 1 cut(s) 517
PspFI CCCAGC 2 cut(s) 215, 490
PspGI CCWGG 1 cut(s) 723
PspN4I GGNNCC 5 cut(s) 198, 199, 476, 582, 990
PspPI GGNCC 4 cut(s) 197, 346, 475, 493
PspPPI RGGWCCY 1 cut(s) 197
PstI CTGCAG 2 cut(s) 84, 684
PstNI CAGNNNCTG 1 cut(s) 79
RsaI GTAC 1 cut(s) 635
RsaNI GTAC 1 cut(s) 634
SacI GAGCTC 2 cut(s) 327, 412
SaqAI TTAA 3 cut(s) 510, 896, 1060
SatI GCNGC 8 cut(s) 80, 160, 506, 533, 536, 614, 680, 1026
Sau3AI GATC 3 cut(s) 7, 958, 1045
Sau96I GGNCC 4 cut(s) 197, 346, 475, 493
SchI GAGTC 2 cut(s) 680, 698
ScrFI CCNGG 5 cut(s) 320, 425, 486, 487, 725
SduI GDGCHC 4 cut(s) 327, 412, 740, 842
SfaNI GCATC 3 cut(s) 897, 936, 960
SfcI CTRYAG 2 cut(s) 80, 680
Sfr274I CTCGAG 1 cut(s) 815
SinI GGWCC 1 cut(s) 197
SlaI CTCGAG 1 cut(s) 815
SmaI CCCGGG 1 cut(s) 487
SmlI CTYRAG 1 cut(s) 815
SmoI CTYRAG 1 cut(s) 815
SseBI AGGCCT 2 cut(s) 137, 781
SsiI CCGC 9 cut(s) 160, 506, 524, 535, 538, 575, 716, 750, 925
SspI AATATT 1 cut(s) 1041
SstI GAGCTC 2 cut(s) 327, 412
StuI AGGCCT 2 cut(s) 137, 781
StyD4I CCNGG 5 cut(s) 318, 423, 484, 485, 723
StyI CCWWGG 2 cut(s) 39, 654
TaaI ACNGT 3 cut(s) 185, 297, 775
TaiI ACGT 3 cut(s) 150, 519, 591
TaqI TCGA 5 cut(s) 150, 327, 593, 674, 816
TauI GCSGC 3 cut(s) 162, 508, 538
TfiI GAWTC 1 cut(s) 437
Tru1I TTAA 3 cut(s) 510, 896, 1060
Tru9I TTAA 3 cut(s) 510, 896, 1060
TseFI GTSAC 2 cut(s) 210, 911
TseI GCWGC 5 cut(s) 79, 532, 613, 679, 1025
Tsp45I GTSAC 2 cut(s) 210, 911
TspDTI ATGAA 3 cut(s) 76, 331, 467
TspGWI ACGGA 3 cut(s) 420, 745, 857
TspMI CCCGGG 1 cut(s) 485
Van91I CCANNNNNTGG 1 cut(s) 129
VpaK11BI GGWCC 1 cut(s) 197
XcmI CCANNNNNNNNNTGG 1 cut(s) 754
XhoI CTCGAG 1 cut(s) 815
XmaI CCCGGG 1 cut(s) 485
ZraI GACGTC 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.