RchiOBHm_Chr7g0212241
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000212
Physical Location & Seq
Forward (+)
29568909 .. 29570891
1983 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18991

Sequence Viewer

Length: 1392 bp
ATGGAAGCCTGTTTTTCACCCCATAATCTTTGTCAAGAAACCTCTGCAGCCACACTTCAGCAACACCTCCAGTTCATACTTCAAAACCGTCCTGAATTTTGGGTCTACTCCATTTTCTGGCAAGCCTCCAAAGACGGCCACAATGCCATTTCGTTATCATGGGCCGGTGGTCATTTCCGAGGGACCAGAGACTTCTCATCCAAAACATCAACCACTAATAAGCTAGATAACAATTACCAACCAACAATAGGGTTCGATCTGGAGACACCAAAGAAGGGGATCAACAAAGAAGTCGAAGCTTTGTTCCATGAAGACATGAACATGGACGGACTGTTCGACATTAATGGAGATGTCACTGACTCGGAGTGGTTTTACTTCTACACCGTTTCTAATTTGACACAGTCCTTTGCTGCAGGCCTTGAGAGTAACAACATTCTTGGCCATGCATTTTGTTCTGGTGCTTTTGTTTGGTTGGCAGGCGACCACGAGCTTAGGTTCTATGAGTGTGAGAGAGTTAAAGAGGCCCGCATGCATGGAATTCAAACTCTTGTTTGTATTGCAACACCCTTTGGGGTGCTTGAACTGGCTTCTTTAGAAGTGATTAAACAAGACTGGGGTTTTGTGCAGCTTTGTAAGTCTATTTTTGGATCTGACCTAATAACAACCACCGCCAGCGTCTCAAACTCAAAGCAGGGTCATGTTCATGTTCCTCAGTTACAAGATGGGATATTTTCAAGATCGGTTCAGAAGGAGTGGACCACACAAGGTGATATGAGAAAAACTGTCAACCTAAGTGGATCTTCATCTGATTCCGGGCCTTATAAAAGCACATCAAACACTAGATTAAAAGAGAGAGGAAGATTTGATAAGCATGTCAATGCCAACCAAGATTCACCAATAAGCCATTCGAAGGCAGAGAGACAACGCCGGGATAAGCTTAATCATCTATTTTATGCCCTTAGGTCCGTTGTTCCTAATGTCTCAAAGATGGATAAAGCTTCGACACTATCTGATGCAATTGTATACATCAATAAATTGAAGACAACGATCGAGGAGTTGGAGGCCAAAATCCAAGCAAAACCCAAGAAACCCAAAGCAAGCATCATGATTGACAATATTCTTGATAGCCAAAGCACCAGCACTGCTGCTATGGAGGTGGATGTGGATGTGAAGATTGTAGGGTCAGAAGCCATAATTCGAGTTTGGTGTCCGAATAATCAGGATGATCCATGTGCTAGATTGATGAATGCACTCAGAGACCTTGAATTACAAATTCATCGTGCAAGCATATCTAGTGTGAATGAGTTGATACTTCAAGATGTTATAGTAAGAGTTCCTGATGGATTCGCAAGCGAGGAGGTCATCAAAACCGCAATTATTAATAGATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 ko04075 map04016 map04075
Pfam Domains
Protein Families
HLH bHLH-MYC_N

Protein Analysis

463

Amino Acids

51.94

Weight (kDa)

6.08

Isoelectric Point (pI)

42.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 19 - 215 2.1e-39 bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH PF00010 301 - 347 1.1e-12 Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant PF22754 387 - 459 2.9e-09 Plant bHLH transcription factor, ACT-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 822
AccB7I CCANNNNNTGG 1 cut(s) 117
AccI GTMKAC 2 cut(s) 105, 1023
AciI CCGC 3 cut(s) 526, 669, 1371
AclWI GGATC 4 cut(s) 287, 655, 805, 1220
AcoI YGGCCR 2 cut(s) 136, 439
AcsI RAATTY 3 cut(s) 95, 537, 1272
AcuI CTGAAG 1 cut(s) 41
AdeI CACNNNGTG 1 cut(s) 767
AfiI CCNNNNNNNGG 4 cut(s) 117, 248, 275, 910
AgsI TTSAA 7 cut(s) 83, 542, 581, 735, 1039, 1265, 1316
AjuI GAANNNNNNNTTGG 2 cut(s) 889, 921
AloI GAACNNNNNNTCC 2 cut(s) 317, 349
AluBI AGCT 6 cut(s) 223, 299, 490, 628, 937, 998
AluI AGCT 6 cut(s) 223, 299, 490, 628, 937, 998
Alw26I GTCTC 6 cut(s) 183, 257, 682, 913, 985, 1251
AlwI GGATC 4 cut(s) 287, 655, 805, 1220
AoxI GGCC 7 cut(s) 136, 162, 415, 439, 522, 815, 1062
ApeKI GCWGC 4 cut(s) 47, 410, 625, 1145
ApoI RAATTY 3 cut(s) 95, 537, 1272
ArsI GACNNNNNNTTYG 4 cut(s) 317, 349, 602, 634
AseI ATTAAT 2 cut(s) 342, 1380
AspS9I GGNCC 6 cut(s) 162, 183, 523, 756, 815, 963
AsuC2I CCSGG 2 cut(s) 814, 929
AsuHPI GGTGA 3 cut(s) 9, 779, 885
AsuII TTCGAA 1 cut(s) 908
AvaII GGWCC 3 cut(s) 183, 756, 963
AxyI CCTNAGG 1 cut(s) 959
BalI TGGCCA 1 cut(s) 441
BauI CACGAG 1 cut(s) 485
BbsI GAAGAC 2 cut(s) 318, 1046
BbvI GCAGC 4 cut(s) 59, 397, 637, 1132
BccI CCATC 3 cut(s) 716, 982, 1334
BceAI ACGGC 1 cut(s) 151
BcnI CCSGG 2 cut(s) 814, 929
BcoDI GTCTC 6 cut(s) 183, 257, 682, 913, 985, 1251
BfaI CTAG 4 cut(s) 224, 840, 1236, 1293
BfmI CTRYAG 2 cut(s) 45, 411
BisI GCNGC 4 cut(s) 48, 411, 626, 1146
BlsI GCNGC 4 cut(s) 49, 412, 627, 1147
Bme1390I CCNGG 2 cut(s) 814, 929
Bme18I GGWCC 3 cut(s) 183, 756, 963
BmgT120I GGNCC 6 cut(s) 162, 183, 523, 756, 815, 963
BmiI GGNNCC 1 cut(s) 184
BmrFI CCNGG 2 cut(s) 814, 929
BmrI ACTGGG 1 cut(s) 622
BmsI GCATC 2 cut(s) 1003, 1110
BmuI ACTGGG 1 cut(s) 622
BpiI GAAGAC 2 cut(s) 318, 1046
BpmI CTGGAG 2 cut(s) 53, 281
Bpu10I CCTNAGC 1 cut(s) 491
Bpu14I TTCGAA 1 cut(s) 908
BpuEI CTTGAG 1 cut(s) 440
BpuMI CCSGG 2 cut(s) 814, 929
BsaBI GATNNNNATC 1 cut(s) 802
BsaI GGTCTC 1 cut(s) 1251
BsaJI CCNNGG 1 cut(s) 178
Bsc4I CCNNNNNNNGG 4 cut(s) 117, 248, 275, 910
Bse118I RCCGGY 1 cut(s) 164
Bse1I ACTGG 3 cut(s) 70, 588, 617
Bse21I CCTNAGG 1 cut(s) 959
Bse8I GATNNNNATC 1 cut(s) 802
BseDI CCNNGG 1 cut(s) 178
BseGI GGATG 4 cut(s) 197, 1165, 1171, 1228
BseJI GATNNNNATC 1 cut(s) 802
BseLI CCNNNNNNNGG 4 cut(s) 117, 248, 275, 910
BseMII CTCAG 2 cut(s) 725, 1267
BseNI ACTGG 3 cut(s) 70, 588, 617
BseRI GAGGAG 2 cut(s) 1067, 1370
BseXI GCAGC 4 cut(s) 59, 397, 637, 1132
BsgI GTGCAG 1 cut(s) 644
Bsh1285I CGRYCG 1 cut(s) 1050
BshFI GGCC 7 cut(s) 138, 164, 417, 441, 524, 817, 1064
BsiEI CGRYCG 1 cut(s) 1050
BsiSI CCGG 3 cut(s) 165, 813, 928
BslFI GGGAC 1 cut(s) 196
BslI CCNNNNNNNGG 4 cut(s) 117, 248, 275, 910
BsmAI GTCTC 6 cut(s) 183, 257, 682, 913, 985, 1251
BsmBI CGTCTC 1 cut(s) 682
BsmFI GGGAC 1 cut(s) 196
BsmI GAATGC 1 cut(s) 1252
BsnI GGCC 7 cut(s) 138, 164, 417, 441, 524, 817, 1064
Bso31I GGTCTC 1 cut(s) 1251
Bsp119I TTCGAA 1 cut(s) 908
Bsp143I GATC 7 cut(s) 256, 279, 647, 737, 797, 1047, 1225
BspACI CCGC 3 cut(s) 526, 669, 1371
BspANI GGCC 7 cut(s) 138, 164, 417, 441, 524, 817, 1064
BspCNI CTCAG 2 cut(s) 724, 1266
BspHI TCATGA 1 cut(s) 1104
BspLI GGNNCC 1 cut(s) 184
BspMAI CTGCAG 2 cut(s) 49, 415
BspPI GGATC 4 cut(s) 287, 655, 805, 1220
BspT104I TTCGAA 1 cut(s) 908
BspTNI GGTCTC 1 cut(s) 1251
BsrFI RCCGGY 1 cut(s) 164
BsrI ACTGG 3 cut(s) 70, 588, 617
BssAI RCCGGY 1 cut(s) 164
BssECI CCNNGG 1 cut(s) 178
BssMI GATC 7 cut(s) 256, 279, 647, 737, 797, 1047, 1225
BssNAI GTATAC 1 cut(s) 1024
BssSI CACGAG 1 cut(s) 485
Bst1107I GTATAC 1 cut(s) 1024
Bst2BI CACGAG 1 cut(s) 485
Bst4CI ACNGT 5 cut(s) 89, 333, 385, 402, 784
BstBI TTCGAA 1 cut(s) 908
BstC8I GCNNGC 9 cut(s) 123, 415, 478, 526, 530, 673, 1099, 1285, 1351
BstDEI CTNAG 5 cut(s) 491, 711, 791, 959, 1253
BstF5I GGATG 4 cut(s) 197, 1165, 1171, 1228
BstKTI GATC 7 cut(s) 259, 282, 650, 740, 800, 1050, 1228
BstMAI GTCTC 6 cut(s) 183, 257, 682, 913, 985, 1251
BstMBI GATC 7 cut(s) 256, 279, 647, 737, 797, 1047, 1225
BstMCI CGRYCG 1 cut(s) 1050
BstNSI RCATGY 2 cut(s) 532, 875
BstSCI CCNGG 2 cut(s) 812, 927
BstSFI CTRYAG 2 cut(s) 45, 411
BstV1I GCAGC 4 cut(s) 59, 397, 637, 1132
BstV2I GAAGAC 2 cut(s) 318, 1046
BstX2I RGATCY 2 cut(s) 647, 797
BstYI RGATCY 2 cut(s) 647, 797
BstZ17I GTATAC 1 cut(s) 1024
Bsu36I CCTNAGG 1 cut(s) 959
BsuRI GGCC 7 cut(s) 138, 164, 417, 441, 524, 817, 1064
BtsCI GGATG 4 cut(s) 197, 1165, 1171, 1228
BtsI GCAGTG 1 cut(s) 1140
BtsIMutI CAGTG 2 cut(s) 354, 1140
Cac8I GCNNGC 9 cut(s) 123, 415, 478, 526, 530, 673, 1099, 1285, 1351
CciI TCATGA 1 cut(s) 1104
Cfr10I RCCGGY 1 cut(s) 164
Cfr13I GGNCC 6 cut(s) 162, 183, 523, 756, 815, 963
CseI GACGC 1 cut(s) 664
CspCI CAANNNNNGTGG 2 cut(s) 775, 810
DdeI CTNAG 5 cut(s) 491, 711, 791, 959, 1253
DpnI GATC 7 cut(s) 258, 281, 649, 739, 799, 1049, 1227
DpnII GATC 7 cut(s) 256, 279, 647, 737, 797, 1047, 1225
DraIII CACNNNGTG 1 cut(s) 767
EaeI YGGCCR 2 cut(s) 136, 439
Eco147I AGGCCT 1 cut(s) 417
Eco31I GGTCTC 1 cut(s) 1251
Eco47I GGWCC 3 cut(s) 183, 756, 963
Eco57I CTGAAG 1 cut(s) 41
Eco81I CCTNAGG 1 cut(s) 959
EcoRI GAATTC 1 cut(s) 537
EcoT22I ATGCAT 2 cut(s) 448, 534
Esp3I CGTCTC 1 cut(s) 682
FalI AAGNNNNNCTT 2 cut(s) 784, 816
FaqI GGGAC 1 cut(s) 196
FauI CCCGC 1 cut(s) 533
FblI GTMKAC 2 cut(s) 105, 1023
Fnu4HI GCNGC 4 cut(s) 48, 411, 626, 1146
FokI GGATG 4 cut(s) 184, 1172, 1178, 1235
Fsp4HI GCNGC 4 cut(s) 48, 411, 626, 1146
FspBI CTAG 4 cut(s) 224, 840, 1236, 1293
GluI GCNGC 4 cut(s) 48, 411, 626, 1146
GsuI CTGGAG 2 cut(s) 53, 281
HaeIII GGCC 7 cut(s) 138, 164, 417, 441, 524, 817, 1064
HapII CCGG 3 cut(s) 165, 813, 928
HgaI GACGC 1 cut(s) 664
HincII GTYRAC 1 cut(s) 787
HindII GTYRAC 1 cut(s) 787
HindIII AAGCTT 3 cut(s) 297, 935, 996
HinfI GANTC 4 cut(s) 359, 809, 890, 1344
HpaII CCGG 3 cut(s) 165, 813, 928
HphI GGTGA 3 cut(s) 9, 779, 885
Hpy166II GTNNAC 4 cut(s) 106, 756, 787, 1024
Hpy188I TCNGA 9 cut(s) 179, 364, 652, 747, 808, 1012, 1186, 1212, 1256
Hpy188III TCNNGA 9 cut(s) 35, 92, 260, 735, 1105, 1121, 1220, 1316, 1337
Hpy8I GTNNAC 4 cut(s) 106, 756, 787, 1024
HpyAV CCTTC 3 cut(s) 268, 742, 904
HpyCH4III ACNGT 5 cut(s) 89, 333, 385, 402, 784
HpyCH4V TGCA 9 cut(s) 47, 413, 446, 532, 560, 625, 1016, 1250, 1283
HpyF3I CTNAG 5 cut(s) 491, 711, 791, 959, 1253
Kzo9I GATC 7 cut(s) 256, 279, 647, 737, 797, 1047, 1225
Lsp1109I GCAGC 4 cut(s) 59, 397, 637, 1132
LweI GCATC 2 cut(s) 1003, 1110
MaeI CTAG 4 cut(s) 224, 840, 1236, 1293
MaeIII GTNAC 3 cut(s) 352, 425, 714
MalI GATC 7 cut(s) 258, 281, 649, 739, 799, 1049, 1227
MboI GATC 7 cut(s) 256, 279, 647, 737, 797, 1047, 1225
MboII GAAGA 5 cut(s) 323, 792, 870, 1051, 1183
MfeI CAATTG 1 cut(s) 1017
MflI RGATCY 2 cut(s) 647, 797
MlsI TGGCCA 1 cut(s) 441
MluNI TGGCCA 1 cut(s) 441
MlyI GAGTC 1 cut(s) 353
MmeI TCCRAC 1 cut(s) 1038
Mox20I TGGCCA 1 cut(s) 441
Mph1103I ATGCAT 2 cut(s) 448, 534
MscI TGGCCA 1 cut(s) 441
MseI TTAA 6 cut(s) 342, 516, 603, 845, 939, 1380
MslI CAYNNNNRTG 3 cut(s) 320, 702, 876
Msp20I TGGCCA 1 cut(s) 441
MspI CCGG 3 cut(s) 165, 813, 928
MspR9I CCNGG 2 cut(s) 814, 929
MunI CAATTG 1 cut(s) 1017
Mva1269I GAATGC 1 cut(s) 1252
NciI CCSGG 2 cut(s) 814, 929
NdeII GATC 7 cut(s) 256, 279, 647, 737, 797, 1047, 1225
NlaIV GGNNCC 1 cut(s) 184
NmuCI GTSAC 1 cut(s) 352
NsiI ATGCAT 2 cut(s) 448, 534
NspI RCATGY 2 cut(s) 532, 875
NspV TTCGAA 1 cut(s) 908
PaeI GCATGC 1 cut(s) 532
PagI TCATGA 1 cut(s) 1104
PceI AGGCCT 1 cut(s) 417
PcsI WCGNNNNNNNCGW 1 cut(s) 333
PctI GAATGC 1 cut(s) 1252
PfeI GAWTC 3 cut(s) 809, 890, 1344
PflFI GACNNNGTC 1 cut(s) 400
PflMI CCANNNNNTGG 1 cut(s) 117
PkrI GCNGC 4 cut(s) 49, 412, 627, 1147
Ple19I CGATCG 1 cut(s) 1050
PleI GAGTC 1 cut(s) 353
PpsI GAGTC 1 cut(s) 353
PshBI ATTAAT 2 cut(s) 342, 1380
PsiI TTATAA 1 cut(s) 822
PspN4I GGNNCC 1 cut(s) 184
PspPI GGNCC 6 cut(s) 162, 183, 523, 756, 815, 963
PstI CTGCAG 2 cut(s) 49, 415
PsuI RGATCY 2 cut(s) 647, 797
PsyI GACNNNGTC 1 cut(s) 400
PvuI CGATCG 1 cut(s) 1050
RseI CAYNNNNRTG 3 cut(s) 320, 702, 876
SaqAI TTAA 6 cut(s) 342, 516, 603, 845, 939, 1380
SatI GCNGC 4 cut(s) 48, 411, 626, 1146
Sau3AI GATC 7 cut(s) 256, 279, 647, 737, 797, 1047, 1225
Sau96I GGNCC 6 cut(s) 162, 183, 523, 756, 815, 963
SchI GAGTC 1 cut(s) 353
ScrFI CCNGG 2 cut(s) 814, 929
SfaNI GCATC 2 cut(s) 1003, 1110
SfcI CTRYAG 2 cut(s) 45, 411
SfuI TTCGAA 1 cut(s) 908
SinI GGWCC 3 cut(s) 183, 756, 963
SmiMI CAYNNNNRTG 3 cut(s) 320, 702, 876
SmlI CTYRAG 1 cut(s) 419
SmoI CTYRAG 1 cut(s) 419
SphI GCATGC 1 cut(s) 532
SseBI AGGCCT 1 cut(s) 417
SsiI CCGC 3 cut(s) 526, 669, 1371
SspI AATATT 1 cut(s) 1117
SspMI CTAG 4 cut(s) 224, 840, 1236, 1293
StuI AGGCCT 1 cut(s) 417
StyD4I CCNGG 2 cut(s) 812, 927
TaaI ACNGT 5 cut(s) 89, 333, 385, 402, 784
TaqI TCGA 7 cut(s) 255, 294, 336, 908, 1001, 1050, 1198
TfiI GAWTC 3 cut(s) 809, 890, 1344
Tru1I TTAA 6 cut(s) 342, 516, 603, 845, 939, 1380
Tru9I TTAA 6 cut(s) 342, 516, 603, 845, 939, 1380
TscAI CASTG 2 cut(s) 361, 1147
TseFI GTSAC 1 cut(s) 352
TseI GCWGC 4 cut(s) 47, 410, 625, 1145
Tsp45I GTSAC 1 cut(s) 352
TspDTI ATGAA 7 cut(s) 64, 324, 332, 692, 792, 1259, 1265
TspGWI ACGGA 2 cut(s) 342, 955
TspRI CASTG 2 cut(s) 361, 1147
Tth111I GACNNNGTC 1 cut(s) 400
Van91I CCANNNNNTGG 1 cut(s) 117
VpaK11BI GGWCC 3 cut(s) 183, 756, 963
VspI ATTAAT 2 cut(s) 342, 1380
XapI RAATTY 3 cut(s) 95, 537, 1272
XceI RCATGY 2 cut(s) 532, 875
XmiI GTMKAC 2 cut(s) 105, 1023
XspI CTAG 4 cut(s) 224, 840, 1236, 1293
Zsp2I ATGCAT 2 cut(s) 448, 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.