Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000785.1

Orthogroup ID

OG0000212

Physical Location & Seq

Genomic Coordinates Reverse (-)

64534 .. 67520

Gene Structure 2987 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000785.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 693 bp

atggaacggcgaagcaattccgatctctgtgaaatgggacgtcgtagtttgggcaatctaggccttatcaacgggccgggtcgggccttgagctccgagacctcaatatggctgagctgggcccacgagcttcagttcaacaactgcgagagagccaaaaaggcccaaatccacaggatcgagaccttgatctgcatcccaacttccgacggtgttcttgaaataggttcctccgatttgatcagagagaactgggggttgatccagcaagccaagtcgttattcgggtctgatcagcctgacccagaaacaagaccgctcgagttcatcaaccggaacttctccatttttgacatcagcatcattgccggcgtgcaggaagaggatcacaactcgtacaatgacgacaagaaacatgtttttggttctagcaagaagaagaacggagctccgaacccaaaccaggacttcgcagattctgactgccagatgaaaagagcgccgaagaaacggggccggaaacccgggctgggtcgagacacgccgcttaaccacgtggaggcggagcagcaacagcgggagaatctcacctcacaagggcggcattggaagagagggaatgagcgtggaggtgaggaaggcggcgttggaagtgagggagtgaacccggaagaaggaagaagaaagagataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0009892 GO:0010468 GO:0010556 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048519 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

230

Amino Acids

25.83

Weight (kDa)

7.72

Isoelectric Point (pI)

46.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000212)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00870
fragaria_vesca	FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica	MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica	Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis	pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis	RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata	RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora	Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii	Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa	Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha	Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana	Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	43
AccBSI	CCGCTC	1 cut(s)	319
AciI	CCGC	6 cut(s)	317, 545, 563, 577, 601, 642
AclWI	GGATC	3 cut(s)	185, 256, 393
AcuI	CTGAAG	1 cut(s)	116
AcvI	CACGTG	1 cut(s)	556
AcyI	GRCGYC	1 cut(s)	40
AfaI	GTAC	1 cut(s)	398
AfiI	CCNNNNNNNGG	6 cut(s)	108, 463, 530, 559, 597, 674
AflIII	ACRYGT	1 cut(s)	415
AgsI	TTSAA	2 cut(s)	139, 221
AjnI	CCWGG	1 cut(s)	462
AjuI	GAANNNNNNNTTGG	4 cut(s)	266, 298, 630, 662
AluBI	AGCT	4 cut(s)	93, 117, 130, 449
AluI	AGCT	4 cut(s)	93, 117, 130, 449
Alw21I	GWGCWC	2 cut(s)	95, 451
Alw26I	GTCTC	3 cut(s)	92, 176, 531
AlwI	GGATC	3 cut(s)	185, 256, 393
AlwNI	CAGNNNCTG	1 cut(s)	479
Ama87I	CYCGRG	2 cut(s)	320, 524
AoxI	GGCC	6 cut(s)	61, 74, 84, 120, 162, 514
ApaI	GGGCCC	1 cut(s)	124
ApeKI	GCWGC	1 cut(s)	568
Asp700I	GAANNNNTTC	1 cut(s)	16
AspLEI	GCGC	1 cut(s)	502
AspS9I	GGNCC	6 cut(s)	74, 84, 120, 121, 163, 514
AsuC2I	CCSGG	4 cut(s)	78, 525, 526, 668
AsuHPI	GGTGA	2 cut(s)	580, 644
AvaI	CYCGRG	2 cut(s)	320, 524
BaeGI	GKGCMC	1 cut(s)	124
BanII	GRGCYC	3 cut(s)	95, 124, 451
BauI	CACGAG	1 cut(s)	125
BbrPI	CACGTG	1 cut(s)	556
Bbv12I	GWGCWC	2 cut(s)	95, 451
BbvI	GCAGC	1 cut(s)	580
BceAI	ACGGC	1 cut(s)	23
BciT130I	CCWGG	1 cut(s)	464
BclI	TGATCA	2 cut(s)	240, 292
BcnI	CCSGG	4 cut(s)	78, 525, 526, 668
BcoDI	GTCTC	3 cut(s)	92, 176, 531
BfaI	CTAG	2 cut(s)	59, 429
BfoI	RGCGCY	1 cut(s)	503
BglI	GCCNNNNNGGC	1 cut(s)	161
BisI	GCNGC	4 cut(s)	545, 569, 602, 643
BlpI	GCTNAGC	1 cut(s)	113
BlsI	GCNGC	4 cut(s)	546, 570, 603, 644
Bme1390I	CCNGG	5 cut(s)	78, 464, 525, 526, 668
BmeT110I	CYCGRG	2 cut(s)	320, 524
BmgT120I	GGNCC	6 cut(s)	74, 84, 120, 121, 163, 514
BmiI	GGNNCC	3 cut(s)	122, 229, 515
BmrFI	CCNGG	5 cut(s)	78, 464, 525, 526, 668
BmrI	ACTGGG	1 cut(s)	262
BmsI	GCATC	2 cut(s)	204, 369
BmuI	ACTGGG	1 cut(s)	262
Bpu1102I	GCTNAGC	1 cut(s)	113
BpuEI	CTTGAG	1 cut(s)	109
BpuMI	CCSGG	4 cut(s)	78, 525, 526, 668
BsaAI	YACGTR	1 cut(s)	556
BsaBI	GATNNNNATC	1 cut(s)	194
BsaHI	GRCGYC	1 cut(s)	40
BsaI	GGTCTC	2 cut(s)	92, 176
BsaJI	CCNNGG	1 cut(s)	524
BsaWI	WCCGGW	1 cut(s)	333
Bsc4I	CCNNNNNNNGG	6 cut(s)	108, 463, 530, 559, 597, 674
Bse118I	RCCGGY	1 cut(s)	368
Bse1I	ACTGG	1 cut(s)	257
Bse3DI	GCAATG	1 cut(s)	363
Bse8I	GATNNNNATC	1 cut(s)	194
BseBI	CCWGG	1 cut(s)	464
BseDI	CCNNGG	1 cut(s)	524
BseGI	GGATG	1 cut(s)	195
BseJI	GATNNNNATC	1 cut(s)	194
BseLI	CCNNNNNNNGG	6 cut(s)	108, 463, 530, 559, 597, 674
BseMI	GCAATG	1 cut(s)	363
BseMII	CTCAG	1 cut(s)	104
BseNI	ACTGG	1 cut(s)	257
BseSI	GKGCMC	1 cut(s)	124
BseXI	GCAGC	1 cut(s)	580
BseYI	CCCAGC	2 cut(s)	117, 529
BsgI	GTGCAG	1 cut(s)	395
BshFI	GGCC	6 cut(s)	63, 76, 86, 122, 164, 516
BsiHKAI	GWGCWC	2 cut(s)	95, 451
BsiHKCI	CYCGRG	2 cut(s)	320, 524
BsiSI	CCGG	6 cut(s)	77, 334, 369, 517, 525, 668
BslFI	GGGAC	1 cut(s)	51
BslI	CCNNNNNNNGG	6 cut(s)	108, 463, 530, 559, 597, 674
BsmAI	GTCTC	3 cut(s)	92, 176, 531
BsmFI	GGGAC	1 cut(s)	51
BsnI	GGCC	6 cut(s)	63, 76, 86, 122, 164, 516
Bso31I	GGTCTC	2 cut(s)	92, 176
BsoBI	CYCGRG	2 cut(s)	320, 524
Bsp120I	GGGCCC	1 cut(s)	120
Bsp1286I	GDGCHC	3 cut(s)	95, 124, 451
Bsp143I	GATC	7 cut(s)	22, 177, 189, 240, 261, 292, 385
Bsp1720I	GCTNAGC	1 cut(s)	113
BspACI	CCGC	6 cut(s)	317, 545, 563, 577, 601, 642
BspANI	GGCC	6 cut(s)	63, 76, 86, 122, 164, 516
BspCNI	CTCAG	1 cut(s)	105
BspLI	GGNNCC	3 cut(s)	122, 229, 515
BspPI	GGATC	3 cut(s)	185, 256, 393
BspTNI	GGTCTC	2 cut(s)	92, 176
BsrBI	CCGCTC	1 cut(s)	319
BsrDI	GCAATG	1 cut(s)	363
BsrFI	RCCGGY	1 cut(s)	368
BsrI	ACTGG	1 cut(s)	257
BssAI	RCCGGY	1 cut(s)	368
BssECI	CCNNGG	1 cut(s)	524
BssMI	GATC	7 cut(s)	22, 177, 189, 240, 261, 292, 385
BssNI	GRCGYC	1 cut(s)	40
BssSI	CACGAG	1 cut(s)	125
Bst2BI	CACGAG	1 cut(s)	125
Bst2UI	CCWGG	1 cut(s)	464
Bst4CI	ACNGT	1 cut(s)	212
Bst6I	CTCTTC	2 cut(s)	375, 605
BstACI	GRCGYC	1 cut(s)	40
BstBAI	YACGTR	1 cut(s)	556
BstC8I	GCNNGC	3 cut(s)	270, 370, 374
BstDEI	CTNAG	1 cut(s)	113
BstF5I	GGATG	1 cut(s)	195
BstH2I	RGCGCY	1 cut(s)	503
BstHHI	GCGC	1 cut(s)	502
BstKTI	GATC	7 cut(s)	25, 180, 192, 243, 264, 295, 388
BstMAI	GTCTC	3 cut(s)	92, 176, 531
BstMBI	GATC	7 cut(s)	22, 177, 189, 240, 261, 292, 385
BstMWI	GCNNNNNNNGC	3 cut(s)	60, 161, 574
BstNI	CCWGG	1 cut(s)	464
BstNSI	RCATGY	1 cut(s)	419
BstSCI	CCNGG	5 cut(s)	76, 462, 523, 524, 666
BstSLI	GKGCMC	1 cut(s)	124
BstV1I	GCAGC	1 cut(s)	580
BsuRI	GGCC	6 cut(s)	63, 76, 86, 122, 164, 516
BtsCI	GGATG	1 cut(s)	195
Cac8I	GCNNGC	3 cut(s)	270, 370, 374
CaiI	CAGNNNCTG	1 cut(s)	479
CfoI	GCGC	1 cut(s)	502
Cfr10I	RCCGGY	1 cut(s)	368
Cfr13I	GGNCC	6 cut(s)	74, 84, 120, 121, 163, 514
Cfr9I	CCCGGG	1 cut(s)	524
Csp6I	GTAC	1 cut(s)	397
CviAII	CATG	1 cut(s)	416
CviQI	GTAC	1 cut(s)	397
DdeI	CTNAG	1 cut(s)	113
DpnI	GATC	7 cut(s)	24, 179, 191, 242, 263, 294, 387
DpnII	GATC	7 cut(s)	22, 177, 189, 240, 261, 292, 385
Eam1104I	CTCTTC	2 cut(s)	375, 605
EarI	CTCTTC	2 cut(s)	375, 605
EciI	GGCGGA	1 cut(s)	578
Ecl136II	GAGCTC	2 cut(s)	93, 449
Eco147I	AGGCCT	1 cut(s)	63
Eco24I	GRGCYC	3 cut(s)	95, 124, 451
Eco31I	GGTCTC	2 cut(s)	92, 176
Eco53kI	GAGCTC	2 cut(s)	93, 449
Eco57I	CTGAAG	1 cut(s)	116
Eco72I	CACGTG	1 cut(s)	556
Eco88I	CYCGRG	2 cut(s)	320, 524
EcoICRI	GAGCTC	2 cut(s)	93, 449
EcoRII	CCWGG	1 cut(s)	462
EcoT38I	GRGCYC	3 cut(s)	95, 124, 451
FaeI	CATG	1 cut(s)	419
FaiI	YATR	2 cut(s)	109, 417
FaqI	GGGAC	1 cut(s)	51
FatI	CATG	1 cut(s)	415
FauI	CCCGC	1 cut(s)	570
FbaI	TGATCA	2 cut(s)	240, 292
Fnu4HI	GCNGC	4 cut(s)	545, 569, 602, 643
FokI	GGATG	1 cut(s)	182
FriOI	GRGCYC	3 cut(s)	95, 124, 451
Fsp4HI	GCNGC	4 cut(s)	545, 569, 602, 643
FspBI	CTAG	2 cut(s)	59, 429
GlaI	GCGC	1 cut(s)	501
GluI	GCNGC	4 cut(s)	545, 569, 602, 643
GsaI	CCCAGC	2 cut(s)	121, 533
HaeII	RGCGCY	1 cut(s)	503
HaeIII	GGCC	6 cut(s)	63, 76, 86, 122, 164, 516
HapII	CCGG	6 cut(s)	77, 334, 369, 517, 525, 668
HhaI	GCGC	1 cut(s)	502
Hin1I	GRCGYC	1 cut(s)	40
Hin1II	CATG	1 cut(s)	419
Hin6I	GCGC	1 cut(s)	500
HinP1I	GCGC	1 cut(s)	500
HinfI	GANTC	2 cut(s)	476, 583
HpaII	CCGG	6 cut(s)	77, 334, 369, 517, 525, 668
HphI	GGTGA	2 cut(s)	580, 644
Hpy166II	GTNNAC	1 cut(s)	664
Hpy188I	TCNGA	8 cut(s)	22, 97, 208, 235, 245, 292, 453, 481
Hpy188III	TCNNGA	3 cut(s)	181, 218, 536
Hpy8I	GTNNAC	1 cut(s)	664
Hpy99I	CGWCG	2 cut(s)	45, 212
HpyAV	CCTTC	2 cut(s)	632, 668
HpyCH4III	ACNGT	1 cut(s)	212
HpyCH4IV	ACGT	2 cut(s)	40, 555
HpyCH4V	TGCA	2 cut(s)	195, 376
HpyF10VI	GCNNNNNNNGC	3 cut(s)	60, 161, 574
HpyF3I	CTNAG	1 cut(s)	113
HpySE526I	ACGT	2 cut(s)	40, 555
Hsp92I	GRCGYC	1 cut(s)	40
Hsp92II	CATG	1 cut(s)	419
HspAI	GCGC	1 cut(s)	500
KroI	GCCGGC	1 cut(s)	368
KroNI	GCCGGC	1 cut(s)	370
Ksp22I	TGATCA	2 cut(s)	240, 292
Kzo9I	GATC	7 cut(s)	22, 177, 189, 240, 261, 292, 385
LmnI	GCTCC	4 cut(s)	98, 446, 454, 565
Lsp1109I	GCAGC	1 cut(s)	580
LweI	GCATC	2 cut(s)	204, 369
MaeI	CTAG	2 cut(s)	59, 429
MaeII	ACGT	2 cut(s)	40, 555
MalI	GATC	7 cut(s)	24, 179, 191, 242, 263, 294, 387
MbiI	CCGCTC	1 cut(s)	319
MboI	GATC	7 cut(s)	22, 177, 189, 240, 261, 292, 385
MboII	GAAGA	8 cut(s)	392, 448, 451, 517, 622, 683, 690, 693
MhlI	GDGCHC	3 cut(s)	95, 124, 451
MluCI	AATT	1 cut(s)	16
MmeI	TCCRAC	2 cut(s)	231, 628
MnlI	CCTC	9 cut(s)	112, 241, 376, 553, 601, 608, 623, 628, 649
MroNI	GCCGGC	1 cut(s)	368
MroXI	GAANNNNTTC	1 cut(s)	16
MseI	TTAA	1 cut(s)	549
MspA1I	CMGCKG	1 cut(s)	577
MspI	CCGG	6 cut(s)	77, 334, 369, 517, 525, 668
MspR9I	CCNGG	5 cut(s)	78, 464, 525, 526, 668
MvaI	CCWGG	1 cut(s)	464
MwoI	GCNNNNNNNGC	3 cut(s)	60, 161, 574
NaeI	GCCGGC	1 cut(s)	370
NciI	CCSGG	4 cut(s)	78, 525, 526, 668
NdeII	GATC	7 cut(s)	22, 177, 189, 240, 261, 292, 385
NgoMIV	GCCGGC	1 cut(s)	368
NlaIII	CATG	1 cut(s)	419
NlaIV	GGNNCC	3 cut(s)	122, 229, 515
NspI	RCATGY	1 cut(s)	419
PaeR7I	CTCGAG	1 cut(s)	320
PceI	AGGCCT	1 cut(s)	63
PciI	ACATGT	1 cut(s)	415
PdiI	GCCGGC	1 cut(s)	370
PdmI	GAANNNNTTC	1 cut(s)	16
PfeI	GAWTC	2 cut(s)	476, 583
PkrI	GCNGC	4 cut(s)	546, 570, 603, 644
PmaCI	CACGTG	1 cut(s)	556
PmlI	CACGTG	1 cut(s)	556
Ppu21I	YACGTR	1 cut(s)	556
PscI	ACATGT	1 cut(s)	415
Psp124BI	GAGCTC	2 cut(s)	95, 451
Psp6I	CCWGG	1 cut(s)	462
PspCI	CACGTG	1 cut(s)	556
PspFI	CCCAGC	2 cut(s)	117, 529
PspGI	CCWGG	1 cut(s)	462
PspN4I	GGNNCC	3 cut(s)	122, 229, 515
PspOMI	GGGCCC	1 cut(s)	120
PspPI	GGNCC	6 cut(s)	74, 84, 120, 121, 163, 514
PspXI	VCTCGAGB	1 cut(s)	320
PstNI	CAGNNNCTG	1 cut(s)	479
RsaI	GTAC	1 cut(s)	398
RsaNI	GTAC	1 cut(s)	397
SacI	GAGCTC	2 cut(s)	95, 451
SaqAI	TTAA	1 cut(s)	549
SatI	GCNGC	4 cut(s)	545, 569, 602, 643
Sau3AI	GATC	7 cut(s)	22, 177, 189, 240, 261, 292, 385
Sau96I	GGNCC	6 cut(s)	74, 84, 120, 121, 163, 514
ScrFI	CCNGG	5 cut(s)	78, 464, 525, 526, 668
SduI	GDGCHC	3 cut(s)	95, 124, 451
SfaNI	GCATC	2 cut(s)	204, 369
Sfr274I	CTCGAG	1 cut(s)	320
SlaI	CTCGAG	1 cut(s)	320
SmaI	CCCGGG	1 cut(s)	526
SmlI	CTYRAG	2 cut(s)	88, 320
SmoI	CTYRAG	2 cut(s)	88, 320
Sse9I	AATT	1 cut(s)	16
SseBI	AGGCCT	1 cut(s)	63
SsiI	CCGC	6 cut(s)	317, 545, 563, 577, 601, 642
SspMI	CTAG	2 cut(s)	59, 429
SstI	GAGCTC	2 cut(s)	95, 451
StuI	AGGCCT	1 cut(s)	63
StyD4I	CCNGG	5 cut(s)	76, 462, 523, 524, 666
TaaI	ACNGT	1 cut(s)	212
TaiI	ACGT	2 cut(s)	43, 558
TaqI	TCGA	3 cut(s)	180, 321, 535
TasI	AATT	1 cut(s)	16
TauI	GCSGC	3 cut(s)	547, 604, 645
TfiI	GAWTC	2 cut(s)	476, 583
Tru1I	TTAA	1 cut(s)	549
Tru9I	TTAA	1 cut(s)	549
TseI	GCWGC	1 cut(s)	568
TspDTI	ATGAA	2 cut(s)	316, 506
TspGWI	ACGGA	1 cut(s)	459
TspMI	CCCGGG	1 cut(s)	524
XceI	RCATGY	1 cut(s)	419
XhoI	CTCGAG	1 cut(s)	320
XmaI	CCCGGG	1 cut(s)	524
XmnI	GAANNNNTTC	1 cut(s)	16
XspI	CTAG	2 cut(s)	59, 429
ZraI	GACGTC	1 cut(s)	41

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.