transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 233 |
| AcuI | CTGAAG | 1 cut(s) | 516 |
| AfaI | GTAC | 3 cut(s) | 381, 406, 451 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 205 |
| AgsI | TTSAA | 2 cut(s) | 323, 331 |
| AjnI | CCWGG | 1 cut(s) | 357 |
| AluBI | AGCT | 1 cut(s) | 508 |
| AluI | AGCT | 1 cut(s) | 508 |
| AseI | ATTAAT | 1 cut(s) | 120 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 62 |
| AspLEI | GCGC | 1 cut(s) | 198 |
| AsuHPI | GGTGA | 1 cut(s) | 25 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 408, 441, 441, 474 |
| BccI | CCATC | 2 cut(s) | 207, 269 |
| BciT130I | CCWGG | 1 cut(s) | 359 |
| BfoI | RGCGCY | 1 cut(s) | 199 |
| BmcAI | AGTACT | 1 cut(s) | 406 |
| Bme1390I | CCNGG | 1 cut(s) | 359 |
| BmiI | GGNNCC | 1 cut(s) | 481 |
| BmrFI | CCNGG | 1 cut(s) | 359 |
| BpmI | CTGGAG | 2 cut(s) | 380, 466 |
| BsaBI | GATNNNNATC | 1 cut(s) | 219 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 205 |
| Bse118I | RCCGGY | 1 cut(s) | 446 |
| Bse1I | ACTGG | 1 cut(s) | 483 |
| Bse8I | GATNNNNATC | 1 cut(s) | 219 |
| BseBI | CCWGG | 1 cut(s) | 359 |
| BseGI | GGATG | 3 cut(s) | 262, 268, 274 |
| BseJI | GATNNNNATC | 1 cut(s) | 219 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 205 |
| BseMII | CTCAG | 1 cut(s) | 426 |
| BseNI | ACTGG | 1 cut(s) | 483 |
| BsiSI | CCGG | 1 cut(s) | 447 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 205 |
| BsmI | GAATGC | 3 cut(s) | 26, 62, 64 |
| Bsp143I | GATC | 1 cut(s) | 465 |
| BspACI | CCGC | 1 cut(s) | 233 |
| BspCNI | CTCAG | 1 cut(s) | 425 |
| BspLI | GGNNCC | 1 cut(s) | 481 |
| BsrFI | RCCGGY | 1 cut(s) | 446 |
| BsrI | ACTGG | 1 cut(s) | 483 |
| BssAI | RCCGGY | 1 cut(s) | 446 |
| BssMI | GATC | 1 cut(s) | 465 |
| Bst2UI | CCWGG | 1 cut(s) | 359 |
| BstC8I | GCNNGC | 1 cut(s) | 151 |
| BstDEI | CTNAG | 1 cut(s) | 412 |
| BstF5I | GGATG | 3 cut(s) | 262, 268, 274 |
| BstH2I | RGCGCY | 1 cut(s) | 199 |
| BstHHI | GCGC | 1 cut(s) | 198 |
| BstKTI | GATC | 1 cut(s) | 468 |
| BstMBI | GATC | 1 cut(s) | 465 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 193 |
| BstNI | CCWGG | 1 cut(s) | 359 |
| BstSCI | CCNGG | 1 cut(s) | 357 |
| BtsCI | GGATG | 3 cut(s) | 262, 268, 274 |
| BtsIMutI | CAGTG | 1 cut(s) | 90 |
| Cac8I | GCNNGC | 1 cut(s) | 151 |
| CfoI | GCGC | 1 cut(s) | 198 |
| Cfr10I | RCCGGY | 1 cut(s) | 446 |
| Csp6I | GTAC | 3 cut(s) | 380, 405, 450 |
| CviJI | RGCY | 4 cut(s) | 357, 446, 480, 508 |
| CviKI_1 | RGCY | 4 cut(s) | 357, 446, 480, 508 |
| CviQI | GTAC | 3 cut(s) | 380, 405, 450 |
| DdeI | CTNAG | 1 cut(s) | 412 |
| DpnI | GATC | 1 cut(s) | 467 |
| DpnII | GATC | 1 cut(s) | 465 |
| Eco57I | CTGAAG | 1 cut(s) | 516 |
| EcoRII | CCWGG | 1 cut(s) | 357 |
| EcoT22I | ATGCAT | 1 cut(s) | 64 |
| FaiI | YATR | 5 cut(s) | 390, 488, 514, 525, 546 |
| FokI | GGATG | 3 cut(s) | 269, 275, 281 |
| GlaI | GCGC | 1 cut(s) | 197 |
| GsuI | CTGGAG | 2 cut(s) | 380, 466 |
| HaeII | RGCGCY | 1 cut(s) | 199 |
| HapII | CCGG | 1 cut(s) | 447 |
| HhaI | GCGC | 1 cut(s) | 198 |
| Hin6I | GCGC | 1 cut(s) | 196 |
| HinP1I | GCGC | 1 cut(s) | 196 |
| HinfI | GANTC | 3 cut(s) | 173, 284, 367 |
| HpaII | CCGG | 1 cut(s) | 447 |
| HphI | GGTGA | 1 cut(s) | 25 |
| Hpy166II | GTNNAC | 2 cut(s) | 242, 382 |
| Hpy188I | TCNGA | 4 cut(s) | 68, 103, 208, 415 |
| Hpy188III | TCNNGA | 3 cut(s) | 170, 305, 469 |
| Hpy8I | GTNNAC | 2 cut(s) | 242, 382 |
| HpyAV | CCTTC | 2 cut(s) | 165, 470 |
| HpyCH4V | TGCA | 5 cut(s) | 24, 62, 230, 502, 527 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 193 |
| HpyF3I | CTNAG | 1 cut(s) | 412 |
| HspAI | GCGC | 1 cut(s) | 196 |
| Kzo9I | GATC | 1 cut(s) | 465 |
| LmnI | GCTCC | 1 cut(s) | 485 |
| LpnPI | CCDG | 8 cut(s) | 123, 183, 273, 344, 362, 371, 460, 496 |
| MalI | GATC | 1 cut(s) | 467 |
| MboI | GATC | 1 cut(s) | 465 |
| MboII | GAAGA | 5 cut(s) | 49, 168, 221, 224, 284 |
| MluCI | AATT | 1 cut(s) | 547 |
| MlyI | GAGTC | 1 cut(s) | 361 |
| MnlI | CCTC | 7 cut(s) | 4, 45, 247, 253, 259, 357, 421 |
| Mph1103I | ATGCAT | 1 cut(s) | 64 |
| MroXI | GAANNNNTTC | 1 cut(s) | 62 |
| MseI | TTAA | 3 cut(s) | 120, 426, 550 |
| MslI | CAYNNNNRTG | 1 cut(s) | 387 |
| MspI | CCGG | 1 cut(s) | 447 |
| MspR9I | CCNGG | 1 cut(s) | 359 |
| Mva1269I | GAATGC | 3 cut(s) | 26, 62, 64 |
| MvaI | CCWGG | 1 cut(s) | 359 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 193 |
| NdeII | GATC | 1 cut(s) | 465 |
| NlaIV | GGNNCC | 1 cut(s) | 481 |
| NsiI | ATGCAT | 1 cut(s) | 64 |
| PctI | GAATGC | 3 cut(s) | 26, 62, 64 |
| PdmI | GAANNNNTTC | 1 cut(s) | 62 |
| PfeI | GAWTC | 2 cut(s) | 173, 284 |
| PleI | GAGTC | 1 cut(s) | 361 |
| PpsI | GAGTC | 1 cut(s) | 361 |
| PshBI | ATTAAT | 1 cut(s) | 120 |
| Psp6I | CCWGG | 1 cut(s) | 357 |
| PspGI | CCWGG | 1 cut(s) | 357 |
| PspN4I | GGNNCC | 1 cut(s) | 481 |
| RsaI | GTAC | 3 cut(s) | 381, 406, 451 |
| RsaNI | GTAC | 3 cut(s) | 380, 405, 450 |
| RseI | CAYNNNNRTG | 1 cut(s) | 387 |
| SaqAI | TTAA | 3 cut(s) | 120, 426, 550 |
| Sau3AI | GATC | 1 cut(s) | 465 |
| ScaI | AGTACT | 1 cut(s) | 406 |
| SchI | GAGTC | 1 cut(s) | 361 |
| ScrFI | CCNGG | 1 cut(s) | 359 |
| SetI | ASST | 2 cut(s) | 15, 510 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 387 |
| Sse9I | AATT | 1 cut(s) | 547 |
| SsiI | CCGC | 1 cut(s) | 233 |
| StyD4I | CCNGG | 1 cut(s) | 357 |
| TaqI | TCGA | 1 cut(s) | 518 |
| TasI | AATT | 1 cut(s) | 547 |
| TatI | WGTACW | 1 cut(s) | 404 |
| TfiI | GAWTC | 2 cut(s) | 173, 284 |
| Tru1I | TTAA | 3 cut(s) | 120, 426, 550 |
| Tru9I | TTAA | 3 cut(s) | 120, 426, 550 |
| TscAI | CASTG | 1 cut(s) | 97 |
| TspDTI | ATGAA | 6 cut(s) | 33, 147, 231, 285, 324, 405 |
| TspGWI | ACGGA | 1 cut(s) | 399 |
| TspRI | CASTG | 1 cut(s) | 97 |
| VspI | ATTAAT | 1 cut(s) | 120 |
| XmnI | GAANNNNTTC | 1 cut(s) | 62 |
| ZrmI | AGTACT | 1 cut(s) | 406 |
| Zsp2I | ATGCAT | 1 cut(s) | 64 |