transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 173 |
| AfaI | GTAC | 1 cut(s) | 101 |
| AfeI | AGCGCT | 1 cut(s) | 226 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 173 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 27 |
| Aor51HI | AGCGCT | 1 cut(s) | 226 |
| AoxI | GGCC | 1 cut(s) | 138 |
| AspLEI | GCGC | 1 cut(s) | 227 |
| AspS9I | GGNCC | 1 cut(s) | 72 |
| AvaII | GGWCC | 1 cut(s) | 72 |
| BceAI | ACGGC | 1 cut(s) | 77 |
| BclI | TGATCA | 1 cut(s) | 199 |
| BfoI | RGCGCY | 1 cut(s) | 228 |
| Bme18I | GGWCC | 1 cut(s) | 72 |
| BmgT120I | GGNCC | 1 cut(s) | 72 |
| BmsI | GCATC | 1 cut(s) | 79 |
| BsaJI | CCNNGG | 1 cut(s) | 93 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 173 |
| BseDI | CCNNGG | 1 cut(s) | 93 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 173 |
| BseRI | GAGGAG | 1 cut(s) | 143 |
| BshFI | GGCC | 1 cut(s) | 140 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 173 |
| BsnI | GGCC | 1 cut(s) | 140 |
| Bsp143I | GATC | 1 cut(s) | 199 |
| BspACI | CCGC | 1 cut(s) | 173 |
| BspANI | GGCC | 1 cut(s) | 140 |
| BssECI | CCNNGG | 1 cut(s) | 93 |
| BssMI | GATC | 1 cut(s) | 199 |
| BstC8I | GCNNGC | 2 cut(s) | 84, 175 |
| BstDSI | CCRYGG | 1 cut(s) | 93 |
| BstH2I | RGCGCY | 1 cut(s) | 228 |
| BstHHI | GCGC | 1 cut(s) | 227 |
| BstKTI | GATC | 1 cut(s) | 202 |
| BstMBI | GATC | 1 cut(s) | 199 |
| BsuRI | GGCC | 1 cut(s) | 140 |
| BtgI | CCRYGG | 1 cut(s) | 93 |
| Cac8I | GCNNGC | 2 cut(s) | 84, 175 |
| CaiI | CAGNNNCTG | 1 cut(s) | 27 |
| CfoI | GCGC | 1 cut(s) | 227 |
| Cfr13I | GGNCC | 1 cut(s) | 72 |
| Csp6I | GTAC | 1 cut(s) | 100 |
| CviJI | RGCY | 3 cut(s) | 140, 166, 213 |
| CviKI_1 | RGCY | 3 cut(s) | 140, 166, 213 |
| CviQI | GTAC | 1 cut(s) | 100 |
| DpnI | GATC | 1 cut(s) | 201 |
| DpnII | GATC | 1 cut(s) | 199 |
| Eco47I | GGWCC | 1 cut(s) | 72 |
| Eco47III | AGCGCT | 1 cut(s) | 226 |
| EcoO109I | RGGNCCY | 1 cut(s) | 72 |
| FaiI | YATR | 1 cut(s) | 230 |
| FauI | CCCGC | 1 cut(s) | 166 |
| FbaI | TGATCA | 1 cut(s) | 199 |
| GlaI | GCGC | 1 cut(s) | 226 |
| HaeII | RGCGCY | 1 cut(s) | 228 |
| HaeIII | GGCC | 1 cut(s) | 140 |
| HhaI | GCGC | 1 cut(s) | 227 |
| Hin6I | GCGC | 1 cut(s) | 225 |
| HinP1I | GCGC | 1 cut(s) | 225 |
| HinfI | GANTC | 1 cut(s) | 24 |
| Hpy188III | TCNNGA | 1 cut(s) | 197 |
| HspAI | GCGC | 1 cut(s) | 225 |
| Ksp22I | TGATCA | 1 cut(s) | 199 |
| Kzo9I | GATC | 1 cut(s) | 199 |
| LpnPI | CCDG | 4 cut(s) | 22, 55, 223, 235 |
| LweI | GCATC | 1 cut(s) | 79 |
| MaeIII | GTNAC | 1 cut(s) | 188 |
| MalI | GATC | 1 cut(s) | 201 |
| MboI | GATC | 1 cut(s) | 199 |
| MluCI | AATT | 1 cut(s) | 231 |
| MmeI | TCCRAC | 1 cut(s) | 114 |
| MnlI | CCTC | 4 cut(s) | 44, 85, 121, 130 |
| NdeII | GATC | 1 cut(s) | 199 |
| PfeI | GAWTC | 1 cut(s) | 24 |
| PpuMI | RGGWCCY | 1 cut(s) | 72 |
| Psp5II | RGGWCCY | 1 cut(s) | 72 |
| PspPI | GGNCC | 1 cut(s) | 72 |
| PspPPI | RGGWCCY | 1 cut(s) | 72 |
| PstNI | CAGNNNCTG | 1 cut(s) | 27 |
| RsaI | GTAC | 1 cut(s) | 101 |
| RsaNI | GTAC | 1 cut(s) | 100 |
| Sau3AI | GATC | 1 cut(s) | 199 |
| Sau96I | GGNCC | 1 cut(s) | 72 |
| SetI | ASST | 1 cut(s) | 74 |
| SfaNI | GCATC | 1 cut(s) | 79 |
| SinI | GGWCC | 1 cut(s) | 72 |
| Sse9I | AATT | 1 cut(s) | 231 |
| SsiI | CCGC | 1 cut(s) | 173 |
| TasI | AATT | 1 cut(s) | 231 |
| TfiI | GAWTC | 1 cut(s) | 24 |
| VpaK11BI | GGWCC | 1 cut(s) | 72 |