Rmu_sc0001018.1_g000022
BHLH Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001018.1
OG0000212
Physical Location & Seq
Reverse (-)
92349 .. 93748
1400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001018.1_g000022.1.cds

Sequence Viewer

Length: 924 bp
atgccccgtccggcggcgcgtccatgtgacgtcgtcgtcggacaggtgttttgtgggtctaccggcgtggaacaatcgatttggggccaaagcaggttgctaggaaagcttttatcacattcgaagagggcaaggcaagcaaaagtgcgcttgttccttgttctttgtcaacttgcgcagaggcaaagaatcagagcaagggcggagtggcgaaggatttctggttttcgatgggggcgatctcggttttcaaggtggactaccggcgctggtgcccctgcgttggggttgagcaaagctgacggaggtcgtcatgatcgacgtggtattggatctgattttgagtcctacccgcacgataggcttgctggggatatggcttgttgggcctgccctaggctattgggccctctttgctctctctccccctctgtttatctccctcgtcttcttccaaaaacaaccagctctctttcttcttccttcttccgggctcactccctcactcgatctttcgccgtcggggactgctctattcccggtaaggccttcgactccgggacctcaatctggctgagcggagcccacgagcttcagttcaacaactgcgagagagccaaagaggcccaaatccacgggatcgagaccttgatcgatgttcttcaaatgggttcctccgatcagctcgacccggaaataagaccgttcgagttcatcaaccggaacttctccatttttgacatcggcatcattgccggcgtgcaggaagaagatcacagctcgtacaatgacgacaagaaacatgtttttggttctagcaagaagaagaacggagctccgaacccaaacctggacttcgcagattccaactgccagatgaaaagagcgccgaagaaacggagccggaaacccaggctgggttga

Protein Analysis

307

Amino Acids

34.1

Weight (kDa)

10.0

Isoelectric Point (pI)

50.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000212)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00870
fragaria_vesca FvH4_5g10850 FvH4_5g10851 FvH4_5g23290 FvH4_7g17380
malus_domestica MD00G1137900.v1.1 MD01G1086800.v1.1 MD01G1086900.v1.1 MD03G1096500.v1.1 MD06G1119900.v1.1 MD06G1120000.v1.1 MD06G1120100.v1.1 MD06G1120200.v1.1 MD11G1120400.v1.1 MD11G1145000.v1.1 MD11G1254000.v1.1 MD11G1254100.v1.1 MD14G1126900.v1.1 MD14G1127000.v1.1 MD14G1137200.v1.1
prunus_persica Prupe.2G195300_v2.0.a1 Prupe.2G195300_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087600_v2.0.a1 Prupe.5G087900_v2.0.a1 Prupe.5G130300_v2.0.a1 Prupe.5G130400_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130500_v2.0.a1 Prupe.5G130600_v2.0.a1 Prupe.5G130700_v2.0.a1
pyrus_communis pycom01g09980 pycom06g11100 pycom06g11120 pycom06g11150 pycom11g10170 pycom11g22490 pycom14g11190 pycom14g11210
rosa_chinensis RchiOBHm_Chr1g0360811 RchiOBHm_Chr5g0055891 RchiOBHm_Chr6g0281801 RchiOBHm_Chr7g0187141 RchiOBHm_Chr7g0187261 RchiOBHm_Chr7g0212241 RchiOBHm_Chr7g0228701
rosa_laevigata RLG00000002910 RLG00000002911 RLG00000004796 RLG00000004799 RLG00000027784
rosa_multiflora Rmu_sc0000340.1_g000036 Rmu_sc0000378.1_g000013 Rmu_sc0000441.1_g000071 Rmu_sc0000559.1_g000036 Rmu_sc0000637.1_g000017 Rmu_sc0000765.1_g000001 Rmu_sc0000785.1_g000012 Rmu_sc0000854.1_g000018 Rmu_sc0000959.1_g000018 Rmu_sc0001018.1_g000022 Rmu_sc0001136.1_g000078 Rmu_sc0001433.1_g000037 Rmu_sc0001687.1_g000010 Rmu_sc0001716.1_g000014 Rmu_sc0001758.1_g000023 Rmu_sc0001758.1_g000031 Rmu_sc0001826.1_g000009 Rmu_sc0001850.1_g000027 Rmu_sc0001911.1_g000019 Rmu_sc0001937.1_g000001 Rmu_sc0002283.1_g000088 Rmu_sc0002532.1_g000058 Rmu_sc0002571.1_g000032 Rmu_sc0002888.1_g000014 Rmu_sc0002939.1_g000019 Rmu_sc0003197.1_g000007 Rmu_sc0003546.1_g000034 Rmu_sc0004002.1_g000003 Rmu_sc0004145.1_g000003 Rmu_sc0004301.1_g000013 Rmu_sc0004603.1_g000002 Rmu_sc0004748.1_g000007 Rmu_sc0004842.1_g000002 Rmu_sc0004990.1_g000012 Rmu_sc0005017.1_g000006 Rmu_sc0006343.1_g000001 Rmu_sc0006836.1_g000017 Rmu_sc0007491.1_g000003 Rmu_sc0008192.1_g000011 Rmu_sc0008877.1_g000007 Rmu_sc0010621.1_g000006 Rmu_sc0013354.1_g000017 Rmu_sc0013486.1_g000001 Rmu_sc0016511.1_g000001 Rmu_sc0021179.1_g000001 Rmu_sc0026563.1_g000001 Rmu_sc0027421.1_g000001 Rmu_sc0037114.1_g000001 Rmu_ssc0000022.1_g000039 Rmu_ssc0000050.1_g000048 Rmu_ssc0000141.1_g000004 Rmu_ssc0000280.1_g000002 Rmu_ssc0000387.1_g000024 Rmu_ssc0000459.1_g000030
rosa_roxburghii Rroxscaffold_3G00247010 Rroxscaffold_3G00267630 Rroxscaffold_3G00267670 Rroxscaffold_4G00295790 Rroxscaffold_4G00305930 Rroxscaffold_5G00346440 Rroxscaffold_7G00211970
rosa_rugosa Rorug01G0281800 Rorug02G0258400 Rorug04G0057400 Rorug04G0362000 Rorug04G0437300 Rorug06G0161400 Rorug06G0213300 Rorug06G0478800 Rorug06G0479300 Rorug06G0479300 Rorug07G0132200 Rorug07G0321200
rosa_samantha Rh1AG293700 Rh1BG258400 Rh1CG276200 Rh1DG288700 Rh7AG084400 Rh7AG084900 Rh7AG265100 Rh7BG078100 Rh7BG078600 Rh7CG085500 Rh7CG085800 Rh7CG281900 Rh7DG086500 Rh7DG086900 Rh7DG272300
rosa_wichuraiana Rw1G025990 Rw7G007440 Rw7G007460 Rw7G022700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 35
AatII GACGTC 1 cut(s) 33
Acc16I TGCGCA 1 cut(s) 177
Acc36I ACCTGC 1 cut(s) 84
AccB1I GGYRCC 1 cut(s) 272
AccBSI CCGCTC 1 cut(s) 579
AccI GTMKAC 1 cut(s) 59
AccII CGCG 1 cut(s) 19
AciI CCGC 4 cut(s) 14, 203, 353, 579
AclWI GGATC 2 cut(s) 340, 647
AcuI CTGAAG 1 cut(s) 578
AcyI GRCGYC 1 cut(s) 30
AfaI GTAC 1 cut(s) 785
AfiI CCNNNNNNNGG 8 cut(s) 13, 283, 284, 396, 489, 570, 850, 917
AflIII ACRYGT 1 cut(s) 802
AgsI TTSAA 3 cut(s) 252, 601, 665
AjiI CACGTC 1 cut(s) 323
AjnI CCWGG 2 cut(s) 849, 911
AluBI AGCT 7 cut(s) 109, 299, 468, 592, 685, 780, 836
AluI AGCT 7 cut(s) 109, 299, 468, 592, 685, 780, 836
Alw21I GWGCWC 1 cut(s) 838
Alw26I GTCTC 1 cut(s) 638
AlwI GGATC 2 cut(s) 340, 647
AoxI GGCC 5 cut(s) 85, 387, 406, 546, 624
ApaI GGGCCC 1 cut(s) 410
ArsI GACNNNNNNTTYG 2 cut(s) 33, 65
Asp700I GAANNNNTTC 1 cut(s) 217
AspA2I CCTAGG 1 cut(s) 395
AspLEI GCGC 5 cut(s) 19, 150, 178, 269, 889
AspS9I GGNCC 6 cut(s) 85, 387, 406, 407, 561, 625
AsuC2I CCSGG 4 cut(s) 491, 540, 559, 692
AsuII TTCGAA 1 cut(s) 122
AvaII GGWCC 1 cut(s) 561
AvrII CCTAGG 1 cut(s) 395
BaeGI GKGCMC 2 cut(s) 277, 410
BanI GGYRCC 1 cut(s) 272
BanII GRGCYC 4 cut(s) 410, 496, 586, 838
BauI CACGAG 1 cut(s) 587
BbsI GAAGAC 1 cut(s) 440
Bbv12I GWGCWC 1 cut(s) 838
BccI CCATC 1 cut(s) 225
BceAI ACGGC 1 cut(s) 503
BcgI CGANNNNNNTGC 2 cut(s) 347, 381
BciT130I CCWGG 2 cut(s) 851, 913
BcnI CCSGG 4 cut(s) 491, 540, 559, 692
BcoDI GTCTC 1 cut(s) 638
BfaI CTAG 3 cut(s) 101, 396, 816
BfoI RGCGCY 2 cut(s) 270, 890
BfuAI ACCTGC 1 cut(s) 84
BglI GCCNNNNNGGC 1 cut(s) 623
BisI GCNGC 1 cut(s) 15
BlnI CCTAGG 1 cut(s) 395
BlpI GCTNAGC 1 cut(s) 575
BlsI GCNGC 1 cut(s) 16
Bme1390I CCNGG 6 cut(s) 491, 540, 559, 692, 851, 913
Bme18I GGWCC 1 cut(s) 561
BmgBI CACGTC 1 cut(s) 323
BmgT120I GGNCC 6 cut(s) 85, 387, 406, 407, 561, 625
BmiI GGNNCC 7 cut(s) 86, 274, 408, 562, 583, 673, 902
BmrFI CCNGG 6 cut(s) 491, 540, 559, 692, 851, 913
BmsI GCATC 1 cut(s) 756
BoxI GACNNNNGTC 1 cut(s) 306
BpiI GAAGAC 1 cut(s) 440
Bpu1102I GCTNAGC 1 cut(s) 575
Bpu14I TTCGAA 1 cut(s) 122
BpuMI CCSGG 4 cut(s) 491, 540, 559, 692
Bsa29I ATCGAT 2 cut(s) 77, 654
BsaHI GRCGYC 1 cut(s) 30
BsaI GGTCTC 1 cut(s) 638
BsaJI CCNNGG 3 cut(s) 395, 634, 911
BsaWI WCCGGW 1 cut(s) 720
Bsc4I CCNNNNNNNGG 8 cut(s) 13, 283, 284, 396, 489, 570, 850, 917
Bse118I RCCGGY 3 cut(s) 62, 263, 755
Bse3DI GCAATG 1 cut(s) 750
BseBI CCWGG 2 cut(s) 851, 913
BseCI ATCGAT 2 cut(s) 77, 654
BseDI CCNNGG 3 cut(s) 395, 634, 911
BseLI CCNNNNNNNGG 8 cut(s) 13, 283, 284, 396, 489, 570, 850, 917
BseMI GCAATG 1 cut(s) 750
BseMII CTCAG 1 cut(s) 566
BseSI GKGCMC 2 cut(s) 277, 410
BseYI CCCAGC 2 cut(s) 368, 916
BsgI GTGCAG 1 cut(s) 782
Bsh1236I CGCG 1 cut(s) 19
BshFI GGCC 5 cut(s) 87, 389, 408, 548, 626
BshNI GGYRCC 1 cut(s) 272
BshVI ATCGAT 2 cut(s) 77, 654
BsiHKAI GWGCWC 1 cut(s) 838
BslFI GGGAC 2 cut(s) 539, 574
BslI CCNNNNNNNGG 8 cut(s) 13, 283, 284, 396, 489, 570, 850, 917
BsmAI GTCTC 1 cut(s) 638
BsmFI GGGAC 2 cut(s) 539, 574
BsnI GGCC 5 cut(s) 87, 389, 408, 548, 626
Bso31I GGTCTC 1 cut(s) 638
Bsp119I TTCGAA 1 cut(s) 122
Bsp120I GGGCCC 1 cut(s) 406
Bsp1286I GDGCHC 5 cut(s) 277, 410, 496, 586, 838
Bsp143I GATC 8 cut(s) 239, 316, 332, 509, 639, 651, 679, 772
Bsp1720I GCTNAGC 1 cut(s) 575
BspACI CCGC 4 cut(s) 14, 203, 353, 579
BspANI GGCC 5 cut(s) 87, 389, 408, 548, 626
BspCNI CTCAG 1 cut(s) 567
BspDI ATCGAT 2 cut(s) 77, 654
BspFNI CGCG 1 cut(s) 19
BspHI TCATGA 1 cut(s) 313
BspLI GGNNCC 7 cut(s) 86, 274, 408, 562, 583, 673, 902
BspMI ACCTGC 1 cut(s) 84
BspPI GGATC 2 cut(s) 340, 647
BspT104I TTCGAA 1 cut(s) 122
BspT107I GGYRCC 1 cut(s) 272
BspTNI GGTCTC 1 cut(s) 638
BsrBI CCGCTC 1 cut(s) 579
BsrDI GCAATG 1 cut(s) 750
BsrFI RCCGGY 3 cut(s) 62, 263, 755
BssAI RCCGGY 3 cut(s) 62, 263, 755
BssECI CCNNGG 3 cut(s) 395, 634, 911
BssMI GATC 8 cut(s) 239, 316, 332, 509, 639, 651, 679, 772
BssNI GRCGYC 1 cut(s) 30
BssSI CACGAG 1 cut(s) 587
BssT1I CCWWGG 1 cut(s) 395
Bst2BI CACGAG 1 cut(s) 587
Bst2UI CCWGG 2 cut(s) 851, 913
Bst4CI ACNGT 1 cut(s) 705
Bst6I CTCTTC 1 cut(s) 119
BstACI GRCGYC 1 cut(s) 30
BstBI TTCGAA 1 cut(s) 122
BstC8I GCNNGC 5 cut(s) 138, 366, 391, 757, 761
BstDEI CTNAG 1 cut(s) 575
BstDSI CCRYGG 1 cut(s) 634
BstENI CCTNNNNNAGG 1 cut(s) 394
BstFNI CGCG 1 cut(s) 19
BstH2I RGCGCY 2 cut(s) 270, 890
BstHHI GCGC 5 cut(s) 19, 150, 178, 269, 889
BstKTI GATC 8 cut(s) 242, 319, 335, 512, 642, 654, 682, 775
BstMAI GTCTC 1 cut(s) 638
BstMBI GATC 8 cut(s) 239, 316, 332, 509, 639, 651, 679, 772
BstMWI GCNNNNNNNGC 6 cut(s) 106, 137, 361, 386, 414, 623
BstNI CCWGG 2 cut(s) 851, 913
BstNSI RCATGY 1 cut(s) 806
BstPAI GACNNNNGTC 1 cut(s) 306
BstSCI CCNGG 6 cut(s) 489, 538, 557, 690, 849, 911
BstSLI GKGCMC 2 cut(s) 277, 410
BstUI CGCG 1 cut(s) 19
BstV2I GAAGAC 1 cut(s) 440
BstX2I RGATCY 1 cut(s) 332
BstYI RGATCY 1 cut(s) 332
Bsu15I ATCGAT 2 cut(s) 77, 654
BsuRI GGCC 5 cut(s) 87, 389, 408, 548, 626
BsuTUI ATCGAT 2 cut(s) 77, 654
BtgI CCRYGG 1 cut(s) 634
BtrI CACGTC 1 cut(s) 323
BveI ACCTGC 1 cut(s) 84
Cac8I GCNNGC 5 cut(s) 138, 366, 391, 757, 761
CciI TCATGA 1 cut(s) 313
CfoI GCGC 5 cut(s) 19, 150, 178, 269, 889
Cfr10I RCCGGY 3 cut(s) 62, 263, 755
Cfr13I GGNCC 6 cut(s) 85, 387, 406, 407, 561, 625
ClaI ATCGAT 2 cut(s) 77, 654
CseI GACGC 1 cut(s) 8
Csp6I GTAC 1 cut(s) 784
CviAII CATG 3 cut(s) 24, 314, 803
CviQI GTAC 1 cut(s) 784
DdeI CTNAG 1 cut(s) 575
DpnI GATC 8 cut(s) 241, 318, 334, 511, 641, 653, 681, 774
DpnII GATC 8 cut(s) 239, 316, 332, 509, 639, 651, 679, 772
DrdI GACNNNNNNGTC 1 cut(s) 35
DseDI GACNNNNNNGTC 1 cut(s) 35
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
EciI GGCGGA 1 cut(s) 218
Ecl136II GAGCTC 1 cut(s) 836
Eco130I CCWWGG 1 cut(s) 395
Eco147I AGGCCT 1 cut(s) 548
Eco24I GRGCYC 4 cut(s) 410, 496, 586, 838
Eco31I GGTCTC 1 cut(s) 638
Eco47I GGWCC 1 cut(s) 561
Eco53kI GAGCTC 1 cut(s) 836
Eco57I CTGAAG 1 cut(s) 578
EcoICRI GAGCTC 1 cut(s) 836
EcoNI CCTNNNNNAGG 1 cut(s) 394
EcoO109I RGGNCCY 2 cut(s) 407, 561
EcoRII CCWGG 2 cut(s) 849, 911
EcoT14I CCWWGG 1 cut(s) 395
EcoT38I GRGCYC 4 cut(s) 410, 496, 586, 838
ErhI CCWWGG 1 cut(s) 395
FaeI CATG 3 cut(s) 27, 317, 806
FaiI YATR 4 cut(s) 25, 315, 377, 804
FaqI GGGAC 2 cut(s) 539, 574
FatI CATG 3 cut(s) 23, 313, 802
FauI CCCGC 1 cut(s) 360
FblI GTMKAC 1 cut(s) 59
Fnu4HI GCNGC 1 cut(s) 15
FriOI GRGCYC 4 cut(s) 410, 496, 586, 838
Fsp4HI GCNGC 1 cut(s) 15
FspBI CTAG 3 cut(s) 101, 396, 816
FspI TGCGCA 1 cut(s) 177
GlaI GCGC 5 cut(s) 18, 149, 177, 268, 888
GluI GCNGC 1 cut(s) 15
GsaI CCCAGC 2 cut(s) 372, 920
HaeII RGCGCY 2 cut(s) 270, 890
HaeIII GGCC 5 cut(s) 87, 389, 408, 548, 626
HgaI GACGC 1 cut(s) 8
HhaI GCGC 5 cut(s) 19, 150, 178, 269, 889
Hin1I GRCGYC 1 cut(s) 30
Hin1II CATG 3 cut(s) 27, 317, 806
Hin6I GCGC 5 cut(s) 17, 148, 176, 267, 887
HinP1I GCGC 5 cut(s) 17, 148, 176, 267, 887
HincII GTYRAC 1 cut(s) 170
HindII GTYRAC 1 cut(s) 170
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 4 cut(s) 189, 344, 554, 863
Hpy166II GTNNAC 3 cut(s) 60, 170, 258
Hpy188I TCNGA 5 cut(s) 41, 194, 337, 679, 840
Hpy188III TCNNGA 2 cut(s) 314, 643
Hpy8I GTNNAC 3 cut(s) 60, 170, 258
Hpy99I CGWCG 5 cut(s) 35, 38, 41, 324, 524
HpyAV CCTTC 3 cut(s) 207, 493, 559
HpyCH4III ACNGT 1 cut(s) 705
HpyCH4IV ACGT 2 cut(s) 30, 322
HpyCH4V TGCA 1 cut(s) 763
HpyF10VI GCNNNNNNNGC 6 cut(s) 106, 137, 361, 386, 414, 623
HpyF3I CTNAG 1 cut(s) 575
HpySE526I ACGT 2 cut(s) 30, 322
Hsp92I GRCGYC 1 cut(s) 30
Hsp92II CATG 3 cut(s) 27, 317, 806
HspAI GCGC 5 cut(s) 17, 148, 176, 267, 887
KroI GCCGGC 1 cut(s) 755
KroNI GCCGGC 1 cut(s) 757
Kzo9I GATC 8 cut(s) 239, 316, 332, 509, 639, 651, 679, 772
LmnI GCTCC 4 cut(s) 581, 833, 841, 900
LweI GCATC 1 cut(s) 756
MaeI CTAG 3 cut(s) 101, 396, 816
MaeII ACGT 2 cut(s) 30, 322
MaeIII GTNAC 1 cut(s) 26
MalI GATC 8 cut(s) 241, 318, 334, 511, 641, 653, 681, 774
MbiI CCGCTC 1 cut(s) 579
MboI GATC 8 cut(s) 239, 316, 332, 509, 639, 651, 679, 772
MflI RGATCY 1 cut(s) 332
MhlI GDGCHC 5 cut(s) 277, 410, 496, 586, 838
MlyI GAGTC 2 cut(s) 353, 548
MmeI TCCRAC 2 cut(s) 19, 891
MroNI GCCGGC 1 cut(s) 755
MroXI GAANNNNTTC 1 cut(s) 217
MspR9I CCNGG 6 cut(s) 491, 540, 559, 692, 851, 913
MvaI CCWGG 2 cut(s) 851, 913
MvnI CGCG 1 cut(s) 19
MwoI GCNNNNNNNGC 6 cut(s) 106, 137, 361, 386, 414, 623
NaeI GCCGGC 1 cut(s) 757
NciI CCSGG 4 cut(s) 491, 540, 559, 692
NdeII GATC 8 cut(s) 239, 316, 332, 509, 639, 651, 679, 772
NgoMIV GCCGGC 1 cut(s) 755
NlaIII CATG 3 cut(s) 27, 317, 806
NlaIV GGNNCC 7 cut(s) 86, 274, 408, 562, 583, 673, 902
NmuCI GTSAC 1 cut(s) 26
NsbI TGCGCA 1 cut(s) 177
NspI RCATGY 1 cut(s) 806
NspV TTCGAA 1 cut(s) 122
PagI TCATGA 1 cut(s) 313
PceI AGGCCT 1 cut(s) 548
PciI ACATGT 1 cut(s) 802
PcsI WCGNNNNNNNCGW 2 cut(s) 235, 316
PdiI GCCGGC 1 cut(s) 757
PdmI GAANNNNTTC 1 cut(s) 217
PfeI GAWTC 2 cut(s) 189, 863
PflFI GACNNNGTC 1 cut(s) 32
PfoI TCCNGGA 1 cut(s) 557
PkrI GCNGC 1 cut(s) 16
PleI GAGTC 2 cut(s) 352, 548
PpsI GAGTC 2 cut(s) 352, 548
PpuMI RGGWCCY 1 cut(s) 561
PscI ACATGT 1 cut(s) 802
PshAI GACNNNNGTC 1 cut(s) 306
Psp124BI GAGCTC 1 cut(s) 838
Psp5II RGGWCCY 1 cut(s) 561
Psp6I CCWGG 2 cut(s) 849, 911
PspFI CCCAGC 2 cut(s) 368, 916
PspGI CCWGG 2 cut(s) 849, 911
PspN4I GGNNCC 7 cut(s) 86, 274, 408, 562, 583, 673, 902
PspOMI GGGCCC 1 cut(s) 406
PspPI GGNCC 6 cut(s) 85, 387, 406, 407, 561, 625
PspPPI RGGWCCY 1 cut(s) 561
PsuI RGATCY 1 cut(s) 332
PsyI GACNNNGTC 1 cut(s) 32
RsaI GTAC 1 cut(s) 785
RsaNI GTAC 1 cut(s) 784
SacI GAGCTC 1 cut(s) 838
SatI GCNGC 1 cut(s) 15
Sau3AI GATC 8 cut(s) 239, 316, 332, 509, 639, 651, 679, 772
Sau96I GGNCC 6 cut(s) 85, 387, 406, 407, 561, 625
SchI GAGTC 2 cut(s) 353, 548
ScrFI CCNGG 6 cut(s) 491, 540, 559, 692, 851, 913
SduI GDGCHC 5 cut(s) 277, 410, 496, 586, 838
SfaNI GCATC 1 cut(s) 756
SfuI TTCGAA 1 cut(s) 122
SinI GGWCC 1 cut(s) 561
SseBI AGGCCT 1 cut(s) 548
SsiI CCGC 4 cut(s) 14, 203, 353, 579
SspMI CTAG 3 cut(s) 101, 396, 816
SstI GAGCTC 1 cut(s) 838
StuI AGGCCT 1 cut(s) 548
StyD4I CCNGG 6 cut(s) 489, 538, 557, 690, 849, 911
StyI CCWWGG 1 cut(s) 395
TaaI ACNGT 1 cut(s) 705
TaiI ACGT 2 cut(s) 33, 325
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 2 cut(s) 189, 863
TseFI GTSAC 1 cut(s) 26
Tsp45I GTSAC 1 cut(s) 26
TspDTI ATGAA 2 cut(s) 703, 893
TspGWI ACGGA 3 cut(s) 318, 846, 913
Tth111I GACNNNGTC 1 cut(s) 32
VpaK11BI GGWCC 1 cut(s) 561
XagI CCTNNNNNAGG 1 cut(s) 394
XceI RCATGY 1 cut(s) 806
XmaJI CCTAGG 1 cut(s) 395
XmiI GTMKAC 1 cut(s) 59
XmnI GAANNNNTTC 1 cut(s) 217
XspI CTAG 3 cut(s) 101, 396, 816
ZraI GACGTC 1 cut(s) 31
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.