Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 78 |
| AcsI | RAATTY | 2 cut(s) | 106, 318 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 124 |
| AgsI | TTSAA | 3 cut(s) | 206, 233, 536 |
| AleI | CACNNNNGTG | 1 cut(s) | 14 |
| AluBI | AGCT | 2 cut(s) | 209, 221 |
| AluI | AGCT | 2 cut(s) | 209, 221 |
| Alw26I | GTCTC | 2 cut(s) | 173, 363 |
| AoxI | GGCC | 1 cut(s) | 387 |
| ApoI | RAATTY | 2 cut(s) | 106, 318 |
| AspS9I | GGNCC | 1 cut(s) | 485 |
| AsuHPI | GGTGA | 2 cut(s) | 40, 205 |
| AsuII | TTCGAA | 1 cut(s) | 103 |
| AvaII | GGWCC | 1 cut(s) | 485 |
| BanII | GRGCYC | 1 cut(s) | 413 |
| BcoDI | GTCTC | 2 cut(s) | 173, 363 |
| BfaI | CTAG | 2 cut(s) | 339, 366 |
| Bme18I | GGWCC | 1 cut(s) | 485 |
| BmgT120I | GGNCC | 1 cut(s) | 485 |
| BmiI | GGNNCC | 2 cut(s) | 66, 486 |
| BmsI | GCATC | 3 cut(s) | 21, 127, 442 |
| Bpu14I | TTCGAA | 1 cut(s) | 103 |
| BsaJI | CCNNGG | 1 cut(s) | 353 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 124 |
| BseDI | CCNNGG | 1 cut(s) | 353 |
| BseGI | GGATG | 2 cut(s) | 10, 142 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 124 |
| BshFI | GGCC | 1 cut(s) | 389 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 124 |
| BsmAI | GTCTC | 2 cut(s) | 173, 363 |
| BsnI | GGCC | 1 cut(s) | 389 |
| Bsp119I | TTCGAA | 1 cut(s) | 103 |
| Bsp1286I | GDGCHC | 1 cut(s) | 413 |
| Bsp143I | GATC | 2 cut(s) | 346, 559 |
| BspACI | CCGC | 1 cut(s) | 78 |
| BspANI | GGCC | 1 cut(s) | 389 |
| BspLI | GGNNCC | 2 cut(s) | 66, 486 |
| BspT104I | TTCGAA | 1 cut(s) | 103 |
| BssECI | CCNNGG | 1 cut(s) | 353 |
| BssMI | GATC | 2 cut(s) | 346, 559 |
| BssT1I | CCWWGG | 1 cut(s) | 353 |
| Bst4CI | ACNGT | 2 cut(s) | 16, 374 |
| BstBI | TTCGAA | 1 cut(s) | 103 |
| BstC8I | GCNNGC | 1 cut(s) | 219 |
| BstF5I | GGATG | 2 cut(s) | 10, 142 |
| BstKTI | GATC | 2 cut(s) | 349, 562 |
| BstMAI | GTCTC | 2 cut(s) | 173, 363 |
| BstMBI | GATC | 2 cut(s) | 346, 559 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 417 |
| BsuRI | GGCC | 1 cut(s) | 389 |
| BtsCI | GGATG | 2 cut(s) | 10, 142 |
| Cac8I | GCNNGC | 1 cut(s) | 219 |
| Cfr13I | GGNCC | 1 cut(s) | 485 |
| CviJI | RGCY | 8 cut(s) | 166, 209, 221, 285, 358, 389, 411, 541 |
| CviKI_1 | RGCY | 8 cut(s) | 166, 209, 221, 285, 358, 389, 411, 541 |
| DpnI | GATC | 2 cut(s) | 348, 561 |
| DpnII | GATC | 2 cut(s) | 346, 559 |
| Eco130I | CCWWGG | 1 cut(s) | 353 |
| Eco24I | GRGCYC | 1 cut(s) | 413 |
| Eco47I | GGWCC | 1 cut(s) | 485 |
| EcoO109I | RGGNCCY | 1 cut(s) | 485 |
| EcoT14I | CCWWGG | 1 cut(s) | 353 |
| EcoT38I | GRGCYC | 1 cut(s) | 413 |
| ErhI | CCWWGG | 1 cut(s) | 353 |
| FaiI | YATR | 8 cut(s) | 39, 62, 172, 243, 279, 313, 327, 464 |
| FauI | CCCGC | 1 cut(s) | 71 |
| FokI | GGATG | 2 cut(s) | 17, 149 |
| FriOI | GRGCYC | 1 cut(s) | 413 |
| FspBI | CTAG | 2 cut(s) | 339, 366 |
| HaeIII | GGCC | 1 cut(s) | 389 |
| HindIII | AAGCTT | 1 cut(s) | 207 |
| HinfI | GANTC | 1 cut(s) | 528 |
| HphI | GGTGA | 2 cut(s) | 40, 205 |
| Hpy188III | TCNNGA | 2 cut(s) | 339, 414 |
| HpyCH4III | ACNGT | 2 cut(s) | 16, 374 |
| HpyCH4V | TGCA | 1 cut(s) | 34 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 417 |
| Kzo9I | GATC | 2 cut(s) | 346, 559 |
| LpnPI | CCDG | 4 cut(s) | 138, 300, 399, 403 |
| LweI | GCATC | 3 cut(s) | 21, 127, 442 |
| MaeI | CTAG | 2 cut(s) | 339, 366 |
| MalI | GATC | 2 cut(s) | 348, 561 |
| MboI | GATC | 2 cut(s) | 346, 559 |
| MboII | GAAGA | 2 cut(s) | 31, 341 |
| MhlI | GDGCHC | 1 cut(s) | 413 |
| MluCI | AATT | 6 cut(s) | 106, 318, 328, 442, 457, 552 |
| MlyI | GAGTC | 1 cut(s) | 537 |
| MnlI | CCTC | 1 cut(s) | 78 |
| MseI | TTAA | 4 cut(s) | 189, 294, 333, 510 |
| MslI | CAYNNNNRTG | 1 cut(s) | 14 |
| MspA1I | CMGCKG | 1 cut(s) | 78 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 417 |
| NdeII | GATC | 2 cut(s) | 346, 559 |
| NlaIV | GGNNCC | 2 cut(s) | 66, 486 |
| NspV | TTCGAA | 1 cut(s) | 103 |
| OliI | CACNNNNGTG | 1 cut(s) | 14 |
| PleI | GAGTC | 1 cut(s) | 536 |
| PpsI | GAGTC | 1 cut(s) | 536 |
| PpuMI | RGGWCCY | 1 cut(s) | 485 |
| Psp5II | RGGWCCY | 1 cut(s) | 485 |
| PspN4I | GGNNCC | 2 cut(s) | 66, 486 |
| PspPI | GGNCC | 1 cut(s) | 485 |
| PspPPI | RGGWCCY | 1 cut(s) | 485 |
| RseI | CAYNNNNRTG | 1 cut(s) | 14 |
| SaqAI | TTAA | 4 cut(s) | 189, 294, 333, 510 |
| Sau3AI | GATC | 2 cut(s) | 346, 559 |
| Sau96I | GGNCC | 1 cut(s) | 485 |
| SchI | GAGTC | 1 cut(s) | 537 |
| SduI | GDGCHC | 1 cut(s) | 413 |
| SetI | ASST | 4 cut(s) | 70, 195, 211, 223 |
| SfaNI | GCATC | 3 cut(s) | 21, 127, 442 |
| SfuI | TTCGAA | 1 cut(s) | 103 |
| SinI | GGWCC | 1 cut(s) | 485 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 14 |
| Sse9I | AATT | 6 cut(s) | 106, 318, 328, 442, 457, 552 |
| SsiI | CCGC | 1 cut(s) | 78 |
| SspMI | CTAG | 2 cut(s) | 339, 366 |
| StyI | CCWWGG | 1 cut(s) | 353 |
| TaaI | ACNGT | 2 cut(s) | 16, 374 |
| TaqI | TCGA | 1 cut(s) | 103 |
| TasI | AATT | 6 cut(s) | 106, 318, 328, 442, 457, 552 |
| Tru1I | TTAA | 4 cut(s) | 189, 294, 333, 510 |
| Tru9I | TTAA | 4 cut(s) | 189, 294, 333, 510 |
| TspDTI | ATGAA | 1 cut(s) | 411 |
| TspGWI | ACGGA | 1 cut(s) | 107 |
| VpaK11BI | GGWCC | 1 cut(s) | 485 |
| XapI | RAATTY | 2 cut(s) | 106, 318 |
| XbaI | TCTAGA | 1 cut(s) | 338 |
| XspI | CTAG | 2 cut(s) | 339, 366 |