Rorug05G0592000

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000254
Physical Location & Seq
Forward (+)
78987985 .. 78994101
6117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0592000.1

Sequence Viewer

Length: 1623 bp
ATGGAAATCCTGAGAACTTCCTCTATTCCATCACCACAATTTCCAGCTAAATTTGACAAAACCCAATCCAAAAAACTCACTTTCTTGGGGTTTAAGCAAGTACCCGCTCCATCGTTCTCATTAGTTCAAAGACACAGACCCACATTTAAGACATTCACCACCATATCATCTTCTAATATTACAACTCAGACTGAAAACCCATCTGCACCACAAGTTGAAAATCAGACCCCAGATGATAAATTTGACTGGTATGCCCACTGGTACCCATTGATGCCAGTTTGTGACCTTGACAAAAGGGTACCACATGCAAAGAAAGTTATGGGTATTGATGTGGTGGTGTGGTGGGATAGAAATGAGAGTGCATGGAAGGTGTTTGATGATGCTTGTCCTCACAGATTGGCTCCATTATCTGAAGGGAGGATTGATCAGTGGGGAAGGTTGCAGTGTGTTTATCATGGCTGGTGTTTTAATGGCTCCGGTGACTGCAAGTTCATCCCTCAGGCACCTACCGATGGCCCTCCGATTCACACATCCAAGAAAGCATGTGTAGCTCCTTATCCAAGTACTGTGCAGAATGGAATAGTGTGGTTCTGGCCAAGTTCCGATCCTGAATACAAAGATATTCTTACAGAGAAAAAACCTCCCTACATACCGGAACTGGATGATCCCTCGTATACTTGCTTGATGGGAAATAGAGAGATCCCTTACGGGTATGAGGTCTTGATTGAAAATCTTATGGATCCTGCTCATCTTCCATATGCACATTATGGAATAATGCAAACTCAACAACCGAAAGAGAAGGCTGATAGAGAAGGGGGCAGACCATTAGACATGTATGTTCCTAAGTTAGACATAAATGGTTTCATCGCAGAGCAGAATCCGGGTCAGAGTAAATTTGTGCCACCATGTGTGTTTTATGTTTCTCTCTTTGATCCAATTGACAATAGTAATGGGGCTGCATCCTCACCTGGAACTGAAAAGGTCTCATTAGCCCAAAACAGCCAAAAGAGAGCTCTTTTAGTTTTTATATGCGTTCCAGTAAGTCCAGGTAATAGCAGATTGATATCGACCTTCCCAGAAAACTTTGGTGTTTGGATTAAGATTCTTCCCCGATGGATATATCACATTGGACAAAACCTGGTTGTGGACTCAGATTTATATTTGCTTCATCTTGAGGAACGTAGGATAATGGATGCTGGTCTTACCCAGTGGCAGAAAGCCTGTTTTGTGCCAACAAAGTCAGATGCCGTTGTCATTGGTTTCCGAAAGTGGTTAAACAAGTATGCAGGGGGTCAAGTAGACTGGAGAGGCAAGTTCACAGGGGCTCTTCCCCCTACTCCTCCTAAAGAACAGTTGTTGGACAGGTACTGGTCTCATGTGGTGAACTGCAGCAGTTGCAATGCTGCCCACAAAGCTCTGTGCATGCTTGAAGTTGTATTGCAGGTCGTCTCATTTTCTTTACTCGGAATTGTCGCTGCAATCAAGCAAGGAGTGCTATCATCAGTGGTTGCGAGAACTGCGCTAGTTGCAACAGCTCTACTCTGCTTTGCTGCTTCAAAATGGTTGGCTCATTTTATCTACAAAACTTTTCACTTTCACGACTACAACCATGCCCTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-RVT

Protein Analysis

540

Amino Acids

60.89

Weight (kDa)

8.27

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rieske PF00355 86 - 169 1.4e-23 Rieske [2Fe-2S] domain
PaO PF08417 299 - 400 1.5e-24 Pheophorbide a oxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000254)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25671 FvH4_1g29782 FvH4_2g06731 FvH4_2g09413 FvH4_2g12061 FvH4_2g12671 FvH4_2g14202 FvH4_3g27901 FvH4_3g30492 FvH4_3g36953 FvH4_4g10141 FvH4_4g11162 FvH4_5g27995 FvH4_5g34262 FvH4_6g10681 FvH4_6g13733 FvH4_6g18164 FvH4_6g25491 FvH4_6g25791 FvH4_6g27023 FvH4_6g34321 FvH4_7g05070
pyrus_communis pycom04g06850
rosa_chinensis RchiOBHm_Chr1g0322281 RchiOBHm_Chr1g0334981 RchiOBHm_Chr1g0371181 RchiOBHm_Chr2g0125461 RchiOBHm_Chr2g0127141 RchiOBHm_Chr2g0128961 RchiOBHm_Chr2g0132921 RchiOBHm_Chr3g0486471 RchiOBHm_Chr3g0492911 RchiOBHm_Chr4g0412131 RchiOBHm_Chr4g0426941 RchiOBHm_Chr4g0437331 RchiOBHm_Chr5g0018821 RchiOBHm_Chr5g0040021 RchiOBHm_Chr5g0051041 RchiOBHm_Chr6g0266871 RchiOBHm_Chr6g0271761 RchiOBHm_Chr7g0200931 RchiOBHm_Chr7g0220091
rosa_multiflora Rmu_co7991344.1_g000001 Rmu_sc0000172.1_g000008 Rmu_sc0000194.1_g000010 Rmu_sc0000446.1_g000026 Rmu_sc0000496.1_g000011 Rmu_sc0000530.1_g000013 Rmu_sc0000706.1_g000044 Rmu_sc0000745.1_g000029 Rmu_sc0001301.1_g000027 Rmu_sc0001520.1_g000008 Rmu_sc0001966.1_g000025 Rmu_sc0001989.1_g000007 Rmu_sc0002239.1_g000002 Rmu_sc0002816.1_g000004 Rmu_sc0003458.1_g000001 Rmu_sc0003825.1_g000031 Rmu_sc0003919.1_g000002 Rmu_sc0004053.1_g000007 Rmu_sc0004161.1_g000008 Rmu_sc0004368.1_g000033 Rmu_sc0004383.1_g000002 Rmu_sc0004923.1_g000002 Rmu_sc0005065.1_g000001 Rmu_sc0005478.1_g000001 Rmu_sc0006847.1_g000031 Rmu_sc0009556.1_g000002 Rmu_sc0010783.1_g000007 Rmu_sc0011424.1_g000022 Rmu_sc0013205.1_g000002 Rmu_sc0017407.1_g000001 Rmu_sc0023757.1_g000002 Rmu_sc0032346.1_g000001 Rmu_ssc0000008.1_g000014 Rmu_ssc0000158.1_g000033 Rmu_ssc0000217.1_g000028
rosa_roxburghii Rroxscaffold_1G00000480 Rroxscaffold_1G00026050 Rroxscaffold_1G00026250 Rroxscaffold_2G00085120 Rroxscaffold_2G00119710 Rroxscaffold_2G00126610 Rroxscaffold_2G00129340 Rroxscaffold_3G00245550 Rroxscaffold_5G00340210 Rroxscaffold_5G00340330 Rroxscaffold_6G00397180 Rroxscaffold_7G00216160
rosa_rugosa Rorug01G0040000 Rorug01G0067400 Rorug01G0092300 Rorug01G0197000 Rorug01G0474200 Rorug01G0482500 Rorug01G0489300 Rorug02G0142900 Rorug02G0259000 Rorug02G0283200 Rorug02G0341400 Rorug02G0341600 Rorug02G0370900 Rorug02G0379700 Rorug02G0386100 Rorug02G0387300 Rorug03G0112600 Rorug03G0265600 Rorug03G0298800 Rorug04G0019500 Rorug05G0069900 Rorug05G0070500 Rorug05G0256800 Rorug05G0287300 Rorug05G0592000 Rorug06G0057800 Rorug06G0082000 Rorug06G0118900 Rorug06G0176500 Rorug06G0423100 Rorug07G0050100 Rorug07G0095100 Rorug07G0202100 Rorug07G0216600 Rorug07G0244300 Rorug07G0245500
rosa_samantha Rh1DG154800 Rh2CG613000 Rh6BG016600 Rh6BG475100 Rh6CG013200 Rh7AG443800
rosa_wichuraiana Rw0G021840 Rw4G023650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1432
Acc65I GGTACC 2 cut(s) 261, 298
AccB1I GGYRCC 3 cut(s) 261, 298, 502
AccBSI CCGCTC 1 cut(s) 107
AccI GTMKAC 2 cut(s) 674, 1299
AciI CCGC 1 cut(s) 105
AclWI GGATC 6 cut(s) 599, 659, 694, 734, 747, 926
AcoI YGGCCR 1 cut(s) 593
AcsI RAATTY 3 cut(s) 50, 239, 893
AcuI CTGAAG 1 cut(s) 432
AdeI CACNNNGTG 1 cut(s) 908
AfaI GTAC 5 cut(s) 102, 263, 300, 565, 1367
AfiI CCNNNNNNNGG 2 cut(s) 512, 1144
AflIII ACRYGT 1 cut(s) 831
AgsI TTSAA 5 cut(s) 128, 218, 728, 1430, 1557
AjnI CCWGG 3 cut(s) 967, 1045, 1137
AluBI AGCT 5 cut(s) 47, 551, 1013, 1415, 1535
AluI AGCT 5 cut(s) 47, 551, 1013, 1415, 1535
Alw21I GWGCWC 1 cut(s) 1015
Alw26I GTCTC 3 cut(s) 988, 1377, 1453
AlwI GGATC 6 cut(s) 599, 659, 694, 734, 747, 926
AlwNI CAGNNNCTG 1 cut(s) 1368
AoxI GGCC 2 cut(s) 514, 593
ApeKI GCWGC 5 cut(s) 956, 1389, 1403, 1475, 1550
ApoI RAATTY 3 cut(s) 50, 239, 893
Asp718I GGTACC 2 cut(s) 261, 298
AspLEI GCGC 1 cut(s) 1522
AspS9I GGNCC 1 cut(s) 515
AsuC2I CCSGG 1 cut(s) 882
AsuHPI GGTGA 5 cut(s) 24, 148, 491, 957, 1393
AxyI CCTNAGG 1 cut(s) 498
BalI TGGCCA 1 cut(s) 595
BamHI GGATCC 1 cut(s) 739
BanI GGYRCC 3 cut(s) 261, 298, 502
BanII GRGCYC 2 cut(s) 1015, 1327
Bbv12I GWGCWC 1 cut(s) 1015
BbvI GCAGC 5 cut(s) 943, 1390, 1401, 1462, 1537
BccI CCATC 6 cut(s) 37, 118, 208, 506, 679, 1107
BceAI ACGGC 1 cut(s) 1232
BciT130I CCWGG 3 cut(s) 969, 1047, 1139
BclI TGATCA 1 cut(s) 424
BcnI CCSGG 1 cut(s) 882
BcoDI GTCTC 3 cut(s) 988, 1377, 1453
BfaI CTAG 1 cut(s) 1523
BfmI CTRYAG 1 cut(s) 1387
BfuAI ACCTGC 1 cut(s) 1432
BisI GCNGC 5 cut(s) 957, 1390, 1404, 1476, 1551
BlsI GCNGC 5 cut(s) 958, 1391, 1405, 1477, 1552
BmcAI AGTACT 1 cut(s) 565
Bme1390I CCNGG 4 cut(s) 882, 969, 1047, 1139
BmgT120I GGNCC 1 cut(s) 515
BmiI GGNNCC 6 cut(s) 263, 300, 402, 475, 504, 741
BmrFI CCNGG 4 cut(s) 882, 969, 1047, 1139
BmrI ACTGGG 1 cut(s) 1201
BmsI GCATC 5 cut(s) 261, 370, 968, 1183, 1234
BmuI ACTGGG 1 cut(s) 1201
BpmI CTGGAG 1 cut(s) 1324
BpuEI CTTGAG 1 cut(s) 1193
BpuMI CCSGG 1 cut(s) 882
BsaBI GATNNNNATC 1 cut(s) 1063
BsaI GGTCTC 2 cut(s) 988, 1377
BsaWI WCCGGW 2 cut(s) 476, 652
Bsc4I CCNNNNNNNGG 2 cut(s) 512, 1144
Bse1I ACTGG 8 cut(s) 251, 263, 275, 663, 1037, 1207, 1307, 1373
Bse21I CCTNAGG 1 cut(s) 498
Bse3DI GCAATG 1 cut(s) 1405
Bse8I GATNNNNATC 1 cut(s) 1063
BseBI CCWGG 3 cut(s) 969, 1047, 1139
BseGI GGATG 5 cut(s) 492, 530, 667, 959, 1198
BseJI GATNNNNATC 1 cut(s) 1063
BseLI CCNNNNNNNGG 2 cut(s) 512, 1144
BseMI GCAATG 1 cut(s) 1405
BseMII CTCAG 3 cut(s) 200, 512, 1164
BseNI ACTGG 8 cut(s) 251, 263, 275, 663, 1037, 1207, 1307, 1373
BseRI GAGGAG 1 cut(s) 1329
BseXI GCAGC 5 cut(s) 943, 1390, 1401, 1462, 1537
BsgI GTGCAG 2 cut(s) 189, 590
BshFI GGCC 2 cut(s) 516, 595
BshNI GGYRCC 3 cut(s) 261, 298, 502
BsiHKAI GWGCWC 1 cut(s) 1015
BsiSI CCGG 3 cut(s) 477, 653, 881
BslI CCNNNNNNNGG 2 cut(s) 512, 1144
BsmAI GTCTC 3 cut(s) 988, 1377, 1453
BsmBI CGTCTC 1 cut(s) 1453
BsnI GGCC 2 cut(s) 516, 595
Bso31I GGTCTC 2 cut(s) 988, 1377
Bsp1286I GDGCHC 2 cut(s) 1015, 1327
Bsp143I GATC 6 cut(s) 424, 604, 664, 699, 739, 931
BspACI CCGC 1 cut(s) 105
BspANI GGCC 2 cut(s) 516, 595
BspCNI CTCAG 3 cut(s) 199, 511, 1163
BspLI GGNNCC 6 cut(s) 263, 300, 402, 475, 504, 741
BspMAI CTGCAG 1 cut(s) 1391
BspMI ACCTGC 1 cut(s) 1432
BspPI GGATC 6 cut(s) 599, 659, 694, 734, 747, 926
BspQI GCTCTTC 1 cut(s) 1332
BspT107I GGYRCC 3 cut(s) 261, 298, 502
BspTNI GGTCTC 2 cut(s) 988, 1377
BsrBI CCGCTC 1 cut(s) 107
BsrDI GCAATG 1 cut(s) 1405
BsrI ACTGG 8 cut(s) 251, 263, 275, 663, 1037, 1207, 1307, 1373
BssMI GATC 6 cut(s) 424, 604, 664, 699, 739, 931
BssNAI GTATAC 1 cut(s) 675
Bst1107I GTATAC 1 cut(s) 675
Bst2UI CCWGG 3 cut(s) 969, 1047, 1139
Bst4CI ACNGT 2 cut(s) 568, 1353
Bst6I CTCTTC 1 cut(s) 1332
BstAPI GCANNNNNTGC 2 cut(s) 1395, 1492
BstC8I GCNNGC 1 cut(s) 1424
BstDEI CTNAG 5 cut(s) 11, 186, 498, 843, 1150
BstF5I GGATG 5 cut(s) 492, 530, 667, 959, 1198
BstHHI GCGC 1 cut(s) 1522
BstKTI GATC 6 cut(s) 427, 607, 667, 702, 742, 934
BstMAI GTCTC 3 cut(s) 988, 1377, 1453
BstMBI GATC 6 cut(s) 424, 604, 664, 699, 739, 931
BstMWI GCNNNNNNNGC 6 cut(s) 548, 1395, 1412, 1492, 1517, 1526
BstNI CCWGG 3 cut(s) 969, 1047, 1139
BstNSI RCATGY 4 cut(s) 308, 546, 835, 1426
BstSCI CCNGG 4 cut(s) 880, 967, 1045, 1137
BstSFI CTRYAG 1 cut(s) 1387
BstV1I GCAGC 5 cut(s) 943, 1390, 1401, 1462, 1537
BstX2I RGATCY 2 cut(s) 699, 739
BstYI RGATCY 2 cut(s) 699, 739
BstZ17I GTATAC 1 cut(s) 675
Bsu36I CCTNAGG 1 cut(s) 498
BsuRI GGCC 2 cut(s) 516, 595
BtgZI GCGATG 1 cut(s) 850
BtsCI GGATG 5 cut(s) 492, 530, 667, 959, 1198
BtsI GCAGTG 1 cut(s) 449
BtsIMutI CAGTG 5 cut(s) 256, 434, 449, 1214, 1509
BveI ACCTGC 1 cut(s) 1432
Cac8I GCNNGC 1 cut(s) 1424
CaiI CAGNNNCTG 1 cut(s) 1368
CfoI GCGC 1 cut(s) 1522
Cfr13I GGNCC 1 cut(s) 515
CsiI ACCWGGT 1 cut(s) 1137
Csp6I GTAC 5 cut(s) 101, 262, 299, 564, 1366
CviAII CATG 9 cut(s) 305, 363, 455, 543, 832, 906, 1376, 1423, 1610
CviQI GTAC 5 cut(s) 101, 262, 299, 564, 1366
DdeI CTNAG 5 cut(s) 11, 186, 498, 843, 1150
DpnI GATC 6 cut(s) 426, 606, 666, 701, 741, 933
DpnII GATC 6 cut(s) 424, 604, 664, 699, 739, 931
DraIII CACNNNGTG 1 cut(s) 908
EaeI YGGCCR 1 cut(s) 593
Eam1104I CTCTTC 1 cut(s) 1332
EarI CTCTTC 1 cut(s) 1332
Ecl136II GAGCTC 1 cut(s) 1013
Eco24I GRGCYC 2 cut(s) 1015, 1327
Eco31I GGTCTC 2 cut(s) 988, 1377
Eco32I GATATC 1 cut(s) 1065
Eco53kI GAGCTC 1 cut(s) 1013
Eco57I CTGAAG 1 cut(s) 432
Eco81I CCTNAGG 1 cut(s) 498
EcoICRI GAGCTC 1 cut(s) 1013
EcoRII CCWGG 3 cut(s) 967, 1045, 1137
EcoRV GATATC 1 cut(s) 1065
EcoT38I GRGCYC 2 cut(s) 1015, 1327
Esp3I CGTCTC 1 cut(s) 1453
FaeI CATG 9 cut(s) 308, 366, 458, 546, 835, 909, 1379, 1426, 1613
FalI AAGNNNNNCTT 2 cut(s) 609, 641
FatI CATG 9 cut(s) 304, 362, 454, 542, 831, 905, 1375, 1422, 1609
FauI CCCGC 1 cut(s) 112
FauNDI CATATG 1 cut(s) 757
FbaI TGATCA 1 cut(s) 424
FblI GTMKAC 2 cut(s) 674, 1299
Fnu4HI GCNGC 5 cut(s) 957, 1390, 1404, 1476, 1551
FokI GGATG 5 cut(s) 479, 517, 674, 946, 1205
FriOI GRGCYC 2 cut(s) 1015, 1327
Fsp4HI GCNGC 5 cut(s) 957, 1390, 1404, 1476, 1551
FspBI CTAG 1 cut(s) 1523
GlaI GCGC 1 cut(s) 1521
GluI GCNGC 5 cut(s) 957, 1390, 1404, 1476, 1551
GsuI CTGGAG 1 cut(s) 1324
HaeIII GGCC 2 cut(s) 516, 595
HapII CCGG 3 cut(s) 477, 653, 881
HhaI GCGC 1 cut(s) 1522
Hin1II CATG 9 cut(s) 308, 366, 458, 546, 835, 909, 1379, 1426, 1613
Hin6I GCGC 1 cut(s) 1520
HinP1I GCGC 1 cut(s) 1520
HinfI GANTC 4 cut(s) 523, 877, 1102, 1148
HpaII CCGG 3 cut(s) 477, 653, 881
HphI GGTGA 5 cut(s) 24, 148, 491, 957, 1393
Hpy166II GTNNAC 5 cut(s) 675, 1147, 1300, 1317, 1384
Hpy188III TCNNGA 5 cut(s) 10, 608, 721, 1172, 1598
Hpy8I GTNNAC 5 cut(s) 675, 1147, 1300, 1317, 1384
HpyAV CCTTC 6 cut(s) 361, 407, 429, 793, 806, 1081
HpyCH4III ACNGT 2 cut(s) 568, 1353
HpyCH4IV ACGT 1 cut(s) 1180
HpyF10VI GCNNNNNNNGC 6 cut(s) 548, 1395, 1412, 1492, 1517, 1526
HpyF3I CTNAG 5 cut(s) 11, 186, 498, 843, 1150
HpySE526I ACGT 1 cut(s) 1180
Hsp92II CATG 9 cut(s) 308, 366, 458, 546, 835, 909, 1379, 1426, 1613
HspAI GCGC 1 cut(s) 1520
KpnI GGTACC 2 cut(s) 265, 302
Ksp22I TGATCA 1 cut(s) 424
Kzo9I GATC 6 cut(s) 424, 604, 664, 699, 739, 931
LguI GCTCTTC 1 cut(s) 1332
LmnI GCTCC 4 cut(s) 112, 406, 479, 556
Lsp1109I GCAGC 5 cut(s) 943, 1390, 1401, 1462, 1537
LweI GCATC 5 cut(s) 261, 370, 968, 1183, 1234
MabI ACCWGGT 1 cut(s) 1137
MaeI CTAG 1 cut(s) 1523
MaeII ACGT 1 cut(s) 1180
MaeIII GTNAC 2 cut(s) 281, 479
MalI GATC 6 cut(s) 426, 606, 666, 701, 741, 933
MbiI CCGCTC 1 cut(s) 107
MboI GATC 6 cut(s) 424, 604, 664, 699, 739, 931
MboII GAAGA 4 cut(s) 162, 743, 1097, 1319
MfeI CAATTG 1 cut(s) 936
MflI RGATCY 2 cut(s) 699, 739
MhlI GDGCHC 2 cut(s) 1015, 1327
MlsI TGGCCA 1 cut(s) 595
MluCI AATT 6 cut(s) 38, 50, 239, 893, 936, 1467
MluNI TGGCCA 1 cut(s) 595
MlyI GAGTC 1 cut(s) 1142
MmeI TCCRAC 1 cut(s) 1338
Mox20I TGGCCA 1 cut(s) 595
MscI TGGCCA 1 cut(s) 595
MseI TTAA 5 cut(s) 93, 147, 468, 1098, 1274
Msp20I TGGCCA 1 cut(s) 595
MspI CCGG 3 cut(s) 477, 653, 881
MspR9I CCNGG 4 cut(s) 882, 969, 1047, 1139
MunI CAATTG 1 cut(s) 936
MvaI CCWGG 3 cut(s) 969, 1047, 1139
MwoI GCNNNNNNNGC 6 cut(s) 548, 1395, 1412, 1492, 1517, 1526
NciI CCSGG 1 cut(s) 882
NdeI CATATG 1 cut(s) 757
NdeII GATC 6 cut(s) 424, 604, 664, 699, 739, 931
NlaIII CATG 9 cut(s) 308, 366, 458, 546, 835, 909, 1379, 1426, 1613
NlaIV GGNNCC 6 cut(s) 263, 300, 402, 475, 504, 741
NmuCI GTSAC 2 cut(s) 281, 479
NspI RCATGY 4 cut(s) 308, 546, 835, 1426
PaeI GCATGC 1 cut(s) 1426
PciI ACATGT 1 cut(s) 831
PciSI GCTCTTC 1 cut(s) 1332
PfeI GAWTC 3 cut(s) 523, 877, 1102
PkrI GCNGC 5 cut(s) 958, 1391, 1405, 1477, 1552
PleI GAGTC 1 cut(s) 1142
PpsI GAGTC 1 cut(s) 1142
PscI ACATGT 1 cut(s) 831
Psp124BI GAGCTC 1 cut(s) 1015
Psp6I CCWGG 3 cut(s) 967, 1045, 1137
PspGI CCWGG 3 cut(s) 967, 1045, 1137
PspN4I GGNNCC 6 cut(s) 263, 300, 402, 475, 504, 741
PspPI GGNCC 1 cut(s) 515
PstI CTGCAG 1 cut(s) 1391
PstNI CAGNNNCTG 1 cut(s) 1368
PsuI RGATCY 2 cut(s) 699, 739
RsaI GTAC 5 cut(s) 102, 263, 300, 565, 1367
RsaNI GTAC 5 cut(s) 101, 262, 299, 564, 1366
SacI GAGCTC 1 cut(s) 1015
SapI GCTCTTC 1 cut(s) 1332
SaqAI TTAA 5 cut(s) 93, 147, 468, 1098, 1274
SatI GCNGC 5 cut(s) 957, 1390, 1404, 1476, 1551
Sau3AI GATC 6 cut(s) 424, 604, 664, 699, 739, 931
Sau96I GGNCC 1 cut(s) 515
ScaI AGTACT 1 cut(s) 565
SchI GAGTC 1 cut(s) 1142
ScrFI CCNGG 4 cut(s) 882, 969, 1047, 1139
SduI GDGCHC 2 cut(s) 1015, 1327
SexAI ACCWGGT 1 cut(s) 1137
SfaNI GCATC 5 cut(s) 261, 370, 968, 1183, 1234
SfcI CTRYAG 1 cut(s) 1387
SmlI CTYRAG 1 cut(s) 1172
SmoI CTYRAG 1 cut(s) 1172
SphI GCATGC 1 cut(s) 1426
Sse9I AATT 6 cut(s) 38, 50, 239, 893, 936, 1467
SsiI CCGC 1 cut(s) 105
SspI AATATT 1 cut(s) 178
SspMI CTAG 1 cut(s) 1523
SstI GAGCTC 1 cut(s) 1015
StyD4I CCNGG 4 cut(s) 880, 967, 1045, 1137
TaaI ACNGT 2 cut(s) 568, 1353
TaiI ACGT 1 cut(s) 1183
TaqI TCGA 1 cut(s) 1067
TasI AATT 6 cut(s) 38, 50, 239, 893, 936, 1467
TatI WGTACW 1 cut(s) 563
TfiI GAWTC 3 cut(s) 523, 877, 1102
Tru1I TTAA 5 cut(s) 93, 147, 468, 1098, 1274
Tru9I TTAA 5 cut(s) 93, 147, 468, 1098, 1274
TscAI CASTG 5 cut(s) 263, 434, 449, 1214, 1509
TseFI GTSAC 2 cut(s) 281, 479
TseI GCWGC 5 cut(s) 956, 1389, 1403, 1475, 1550
Tsp45I GTSAC 2 cut(s) 281, 479
TspDTI ATGAA 3 cut(s) 481, 853, 1157
TspRI CASTG 5 cut(s) 263, 434, 449, 1214, 1509
XapI RAATTY 3 cut(s) 50, 239, 893
XceI RCATGY 4 cut(s) 308, 546, 835, 1426
XmiI GTMKAC 2 cut(s) 674, 1299
XspI CTAG 1 cut(s) 1523
ZrmI AGTACT 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.