Rorug07G0244300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000254
Physical Location & Seq
Forward (+)
22567050 .. 22568542
1493 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0244300.1

Sequence Viewer

Length: 1410 bp
ATGGTGGTGAAGTTCAAAGGCTGCGAAGCAGTGAAACCCTCTAAACCCACATGGAAAGGTTCCTTAACTCTATCGGAATGGGATCAAGTTGGAACCATTACTCATATTCCCACCATCTACTTCTACAAATCAAACCCTAACTGGATCACACCAGATGACGTAATCCCCAACACACTTAAAGACTCATTAGCCCGTGCATTGGTTTCCTTCTACCCCTTAGCAGGCCGCCTGCGTTGGATTGGCGGCGGTCGCCTCGAGCTCGACTGCAATGCCATGGGGGTCCAATTCATCGAAGCCGAGTCCGACTCCAAACTCGAAGACTTTGGTGACTTCTCCCCGTCACCAGAGTATAACTATCTTGTCCCCATGGTTGACTATAGCCTCCCGATTCATGAACTTCCCTTGTTGCTTGTTCAATTGACTAGGTTCAAGTGTGCCGGTGTTAGTCTTAGCCTCACCATTTCACATGCTGTTGTTGACGGCCCAAGTGCACTACATTTCATGTCTGAGTGGGCTCGCCTTGCTAGGGGTGAGCCGTTGGAGGTGACGCCATTTTTGGATAGAAAAGCCATGCATGGAGGAGATTTCAGCAGCCGGGCGGCAGCAAAACCTCCACGGCTCTACCACTCAGAGTTTGACCAACCGCCCCTTTTACTGGGGCAATCAGATAATGTACAAGAAAGGAAGAAGAAAACCACTGTTGCCATGCTAAGACTTAGTAAAGATCAGCTCGAGAAACTCAAGTGTAAGGCTAATGATAGTTACAACCTTTACAACAACAACTCCTCTGCTGGCAGTACTACTAAACGTGGCGGTTACACACGTTACGAGACAGTTTCGGGGCATATCTGGAGATGTGCTTGCAAGGCAAGGAACCACAAAGCCGAGCAGCCAACGGCATTGGGAGTTTGCGTTGACTCACGTAGTCGAATGCAACCCCCATTGCCTCAGGGGTACTTCGGAAACGCAACCTTCGATGTGATTGCGACGAGTCATTCGGGGGAGCTGGTTTCAAAGCCATTGGGGTATGCTGCGAGTAGAATAAGGGAGGCGATCGAGAAGGTGTCGAATGATTACGTGTTGTCTGCAATTGAAAACTTGAAGAACCAACCGGATTTGACTCGGTTTCAAGACCTTCATGCTTTGGGAAGTGACCAAGGGCCTTTCTATGGAAACCCTAATCTTGGAGTAGTGAGCTGGTTAACATTGCCGATATATGGTCTGGATTTTGGGTGGGGGAAGGAGATTTATATGGGTCCAGGAACTCATGATTTTGATGGGGATTCATTGATTCTTCCAAGCTCCGATGGAGATGGATCTGTGGTTGTTGCATTATGTCTTCAAGTGGCTCATATGGATGCTTTCAAGAAGCACTTCTATGAGGATTGCCTTCAAGTGGCTCATATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

469

Amino Acids

51.97

Weight (kDa)

6.4

Isoelectric Point (pI)

40.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 3 - 461 4.8e-129 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000254)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25671 FvH4_1g29782 FvH4_2g06731 FvH4_2g09413 FvH4_2g12061 FvH4_2g12671 FvH4_2g14202 FvH4_3g27901 FvH4_3g30492 FvH4_3g36953 FvH4_4g10141 FvH4_4g11162 FvH4_5g27995 FvH4_5g34262 FvH4_6g10681 FvH4_6g13733 FvH4_6g18164 FvH4_6g25491 FvH4_6g25791 FvH4_6g27023 FvH4_6g34321 FvH4_7g05070
pyrus_communis pycom04g06850
rosa_chinensis RchiOBHm_Chr1g0322281 RchiOBHm_Chr1g0334981 RchiOBHm_Chr1g0371181 RchiOBHm_Chr2g0125461 RchiOBHm_Chr2g0127141 RchiOBHm_Chr2g0128961 RchiOBHm_Chr2g0132921 RchiOBHm_Chr3g0486471 RchiOBHm_Chr3g0492911 RchiOBHm_Chr4g0412131 RchiOBHm_Chr4g0426941 RchiOBHm_Chr4g0437331 RchiOBHm_Chr5g0018821 RchiOBHm_Chr5g0040021 RchiOBHm_Chr5g0051041 RchiOBHm_Chr6g0266871 RchiOBHm_Chr6g0271761 RchiOBHm_Chr7g0200931 RchiOBHm_Chr7g0220091
rosa_multiflora Rmu_co7991344.1_g000001 Rmu_sc0000172.1_g000008 Rmu_sc0000194.1_g000010 Rmu_sc0000446.1_g000026 Rmu_sc0000496.1_g000011 Rmu_sc0000530.1_g000013 Rmu_sc0000706.1_g000044 Rmu_sc0000745.1_g000029 Rmu_sc0001301.1_g000027 Rmu_sc0001520.1_g000008 Rmu_sc0001966.1_g000025 Rmu_sc0001989.1_g000007 Rmu_sc0002239.1_g000002 Rmu_sc0002816.1_g000004 Rmu_sc0003458.1_g000001 Rmu_sc0003825.1_g000031 Rmu_sc0003919.1_g000002 Rmu_sc0004053.1_g000007 Rmu_sc0004161.1_g000008 Rmu_sc0004368.1_g000033 Rmu_sc0004383.1_g000002 Rmu_sc0004923.1_g000002 Rmu_sc0005065.1_g000001 Rmu_sc0005478.1_g000001 Rmu_sc0006847.1_g000031 Rmu_sc0009556.1_g000002 Rmu_sc0010783.1_g000007 Rmu_sc0011424.1_g000022 Rmu_sc0013205.1_g000002 Rmu_sc0017407.1_g000001 Rmu_sc0023757.1_g000002 Rmu_sc0032346.1_g000001 Rmu_ssc0000008.1_g000014 Rmu_ssc0000158.1_g000033 Rmu_ssc0000217.1_g000028
rosa_roxburghii Rroxscaffold_1G00000480 Rroxscaffold_1G00026050 Rroxscaffold_1G00026250 Rroxscaffold_2G00085120 Rroxscaffold_2G00119710 Rroxscaffold_2G00126610 Rroxscaffold_2G00129340 Rroxscaffold_3G00245550 Rroxscaffold_5G00340210 Rroxscaffold_5G00340330 Rroxscaffold_6G00397180 Rroxscaffold_7G00216160
rosa_rugosa Rorug01G0040000 Rorug01G0067400 Rorug01G0092300 Rorug01G0197000 Rorug01G0474200 Rorug01G0482500 Rorug01G0489300 Rorug02G0142900 Rorug02G0259000 Rorug02G0283200 Rorug02G0341400 Rorug02G0341600 Rorug02G0370900 Rorug02G0379700 Rorug02G0386100 Rorug02G0387300 Rorug03G0112600 Rorug03G0265600 Rorug03G0298800 Rorug04G0019500 Rorug05G0069900 Rorug05G0070500 Rorug05G0256800 Rorug05G0287300 Rorug05G0592000 Rorug06G0057800 Rorug06G0082000 Rorug06G0118900 Rorug06G0176500 Rorug06G0423100 Rorug07G0050100 Rorug07G0095100 Rorug07G0202100 Rorug07G0216600 Rorug07G0244300 Rorug07G0245500
rosa_samantha Rh1DG154800 Rh2CG613000 Rh6BG016600 Rh6BG475100 Rh6CG013200 Rh7AG443800
rosa_wichuraiana Rw0G021840 Rw4G023650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 6 cut(s) 226, 243, 246, 599, 644, 813
AclWI GGATC 3 cut(s) 90, 152, 1324
AcyI GRCGYC 1 cut(s) 548
AfaI GTAC 3 cut(s) 675, 799, 956
AfiI CCNNNNNNNGG 8 cut(s) 199, 221, 526, 655, 1169, 1184, 1217, 1396
AflIII ACRYGT 2 cut(s) 821, 1077
AjnI CCWGG 1 cut(s) 1258
AluBI AGCT 5 cut(s) 259, 730, 1006, 1197, 1302
AluI AGCT 5 cut(s) 259, 730, 1006, 1197, 1302
Alw21I GWGCWC 2 cut(s) 261, 493
Alw26I GTCTC 1 cut(s) 824
Alw44I GTGCAC 1 cut(s) 489
AlwI GGATC 3 cut(s) 90, 152, 1324
Ama87I CYCGRG 2 cut(s) 254, 731
AoxI GGCC 3 cut(s) 223, 481, 1160
ApaLI GTGCAC 1 cut(s) 489
ApeKI GCWGC 5 cut(s) 21, 591, 602, 889, 1031
ArsI GACNNNNNNTTYG 4 cut(s) 538, 570, 979, 1011
Asp700I GAANNNNTTC 1 cut(s) 1373
AspS9I GGNCC 4 cut(s) 280, 482, 1160, 1256
AsuC2I CCSGG 1 cut(s) 596
AsuHPI GGTGA 6 cut(s) 19, 333, 338, 448, 542, 556
AvaI CYCGRG 2 cut(s) 254, 731
AvaII GGWCC 2 cut(s) 280, 1256
AxyI CCTNAGG 1 cut(s) 948
BaeGI GKGCMC 1 cut(s) 493
BanII GRGCYC 2 cut(s) 261, 517
BbsI GAAGAC 2 cut(s) 324, 1331
Bbv12I GWGCWC 2 cut(s) 261, 493
BbvI GCAGC 5 cut(s) 8, 603, 614, 901, 1018
BccI CCATC 4 cut(s) 122, 1271, 1301, 1307
BceAI ACGGC 4 cut(s) 496, 520, 632, 912
BcgI CGANNNNNNTGC 4 cut(s) 251, 285, 965, 999
BciT130I CCWGG 1 cut(s) 1260
BcnI CCSGG 1 cut(s) 596
BcoDI GTCTC 1 cut(s) 824
BfaI CTAG 2 cut(s) 423, 525
BfmI CTRYAG 1 cut(s) 376
BisI GCNGC 8 cut(s) 22, 226, 244, 592, 600, 603, 890, 1032
BlsI GCNGC 8 cut(s) 23, 227, 245, 593, 601, 604, 891, 1033
BmcAI AGTACT 1 cut(s) 799
Bme1390I CCNGG 2 cut(s) 596, 1260
Bme18I GGWCC 2 cut(s) 280, 1256
BmeT110I CYCGRG 2 cut(s) 254, 731
BmgT120I GGNCC 4 cut(s) 280, 482, 1160, 1256
BmiI GGNNCC 5 cut(s) 61, 94, 281, 875, 1257
BmrFI CCNGG 2 cut(s) 596, 1260
BmrI ACTGGG 1 cut(s) 665
BmsI GCATC 1 cut(s) 1348
BmuI ACTGGG 1 cut(s) 665
BpiI GAAGAC 2 cut(s) 324, 1331
BplI GAGNNNNNCTC 2 cut(s) 290, 322
BpmI CTGGAG 1 cut(s) 871
Bpu10I CCTNAGC 1 cut(s) 217
BpuEI CTTGAG 1 cut(s) 725
BpuMI CCSGG 1 cut(s) 596
BsaAI YACGTR 2 cut(s) 923, 1078
BsaHI GRCGYC 1 cut(s) 548
BsaJI CCNNGG 4 cut(s) 273, 366, 614, 1156
BsaWI WCCGGW 1 cut(s) 1111
BsaXI ACNNNNNCTCC 4 cut(s) 767, 797, 897, 927
Bsc4I CCNNNNNNNGG 8 cut(s) 199, 221, 526, 655, 1169, 1184, 1217, 1396
Bse118I RCCGGY 1 cut(s) 437
Bse1I ACTGG 2 cut(s) 146, 660
Bse21I CCTNAGG 1 cut(s) 948
Bse3DI GCAATG 3 cut(s) 274, 941, 1205
BseBI CCWGG 1 cut(s) 1260
BseDI CCNNGG 4 cut(s) 273, 366, 614, 1156
BseGI GGATG 1 cut(s) 1363
BseLI CCNNNNNNNGG 8 cut(s) 199, 221, 526, 655, 1169, 1184, 1217, 1396
BseMI GCAATG 3 cut(s) 274, 941, 1205
BseMII CTCAG 3 cut(s) 498, 642, 962
BseNI ACTGG 2 cut(s) 146, 660
BseRI GAGGAG 2 cut(s) 594, 775
BseSI GKGCMC 1 cut(s) 493
BseXI GCAGC 5 cut(s) 8, 603, 614, 901, 1018
Bsh1285I CGRYCG 2 cut(s) 250, 1056
BshFI GGCC 3 cut(s) 225, 483, 1162
BsiEI CGRYCG 2 cut(s) 250, 1056
BsiHKAI GWGCWC 2 cut(s) 261, 493
BsiHKCI CYCGRG 2 cut(s) 254, 731
BsiSI CCGG 3 cut(s) 438, 595, 1112
BslFI GGGAC 1 cut(s) 347
BslI CCNNNNNNNGG 8 cut(s) 199, 221, 526, 655, 1169, 1184, 1217, 1396
BsmAI GTCTC 1 cut(s) 824
BsmFI GGGAC 1 cut(s) 347
BsmI GAATGC 1 cut(s) 936
BsnI GGCC 3 cut(s) 225, 483, 1162
BsoBI CYCGRG 2 cut(s) 254, 731
Bsp1286I GDGCHC 3 cut(s) 261, 493, 517
Bsp1407I TGTACA 1 cut(s) 673
Bsp143I GATC 5 cut(s) 82, 144, 724, 1053, 1316
Bsp19I CCATGG 2 cut(s) 273, 366
BspACI CCGC 6 cut(s) 226, 243, 246, 599, 644, 813
BspANI GGCC 3 cut(s) 225, 483, 1162
BspCNI CTCAG 3 cut(s) 499, 641, 961
BspHI TCATGA 2 cut(s) 391, 1267
BspLI GGNNCC 5 cut(s) 61, 94, 281, 875, 1257
BspPI GGATC 3 cut(s) 90, 152, 1324
BsrDI GCAATG 3 cut(s) 274, 941, 1205
BsrFI RCCGGY 1 cut(s) 437
BsrGI TGTACA 1 cut(s) 673
BsrI ACTGG 2 cut(s) 146, 660
BssAI RCCGGY 1 cut(s) 437
BssECI CCNNGG 4 cut(s) 273, 366, 614, 1156
BssMI GATC 5 cut(s) 82, 144, 724, 1053, 1316
BssNI GRCGYC 1 cut(s) 548
BssT1I CCWWGG 3 cut(s) 273, 366, 1156
Bst2UI CCWGG 1 cut(s) 1260
Bst4CI ACNGT 2 cut(s) 700, 835
BstACI GRCGYC 1 cut(s) 548
BstAUI TGTACA 1 cut(s) 673
BstBAI YACGTR 2 cut(s) 923, 1078
BstC8I GCNNGC 5 cut(s) 223, 230, 517, 793, 862
BstDEI CTNAG 7 cut(s) 217, 449, 507, 628, 710, 716, 948
BstDSI CCRYGG 3 cut(s) 273, 366, 614
BstF5I GGATG 1 cut(s) 1363
BstKTI GATC 5 cut(s) 85, 147, 727, 1056, 1319
BstMAI GTCTC 1 cut(s) 824
BstMBI GATC 5 cut(s) 82, 144, 724, 1053, 1316
BstMCI CGRYCG 2 cut(s) 250, 1056
BstMWI GCNNNNNNNGC 3 cut(s) 249, 521, 866
BstNI CCWGG 1 cut(s) 1260
BstNSI RCATGY 1 cut(s) 470
BstSCI CCNGG 2 cut(s) 594, 1258
BstSFI CTRYAG 1 cut(s) 376
BstSLI GKGCMC 1 cut(s) 493
BstV1I GCAGC 5 cut(s) 8, 603, 614, 901, 1018
BstV2I GAAGAC 2 cut(s) 324, 1331
BstX2I RGATCY 1 cut(s) 1316
BstYI RGATCY 1 cut(s) 1316
Bsu36I CCTNAGG 1 cut(s) 948
BsuRI GGCC 3 cut(s) 225, 483, 1162
BtgI CCRYGG 3 cut(s) 273, 366, 614
BtsCI GGATG 1 cut(s) 1363
BtsI GCAGTG 1 cut(s) 36
BtsIMutI CAGTG 2 cut(s) 36, 696
Cac8I GCNNGC 5 cut(s) 223, 230, 517, 793, 862
CciI TCATGA 2 cut(s) 391, 1267
Cfr10I RCCGGY 1 cut(s) 437
Cfr13I GGNCC 4 cut(s) 280, 482, 1160, 1256
CseI GACGC 1 cut(s) 556
Csp6I GTAC 3 cut(s) 674, 798, 955
CviQI GTAC 3 cut(s) 674, 798, 955
DdeI CTNAG 7 cut(s) 217, 449, 507, 628, 710, 716, 948
DpnI GATC 5 cut(s) 84, 146, 726, 1055, 1318
DpnII GATC 5 cut(s) 82, 144, 724, 1053, 1316
Ecl136II GAGCTC 1 cut(s) 259
Eco130I CCWWGG 3 cut(s) 273, 366, 1156
Eco24I GRGCYC 2 cut(s) 261, 517
Eco47I GGWCC 2 cut(s) 280, 1256
Eco53kI GAGCTC 1 cut(s) 259
Eco81I CCTNAGG 1 cut(s) 948
Eco88I CYCGRG 2 cut(s) 254, 731
EcoICRI GAGCTC 1 cut(s) 259
EcoO109I RGGNCCY 1 cut(s) 1160
EcoRII CCWGG 1 cut(s) 1258
EcoT14I CCWWGG 3 cut(s) 273, 366, 1156
EcoT22I ATGCAT 1 cut(s) 576
EcoT38I GRGCYC 2 cut(s) 261, 517
ErhI CCWWGG 3 cut(s) 273, 366, 1156
FalI AAGNNNNNCTT 2 cut(s) 1358, 1390
FaqI GGGAC 1 cut(s) 347
FauNDI CATATG 1 cut(s) 1353
Fnu4HI GCNGC 8 cut(s) 22, 226, 244, 592, 600, 603, 890, 1032
FokI GGATG 1 cut(s) 1370
FriOI GRGCYC 2 cut(s) 261, 517
Fsp4HI GCNGC 8 cut(s) 22, 226, 244, 592, 600, 603, 890, 1032
FspBI CTAG 2 cut(s) 423, 525
GluI GCNGC 8 cut(s) 22, 226, 244, 592, 600, 603, 890, 1032
GsuI CTGGAG 1 cut(s) 871
HaeIII GGCC 3 cut(s) 225, 483, 1162
HapII CCGG 3 cut(s) 438, 595, 1112
HgaI GACGC 1 cut(s) 556
Hin1I GRCGYC 1 cut(s) 548
HincII GTYRAC 4 cut(s) 373, 478, 916, 1203
HindII GTYRAC 4 cut(s) 373, 478, 916, 1203
HinfI GANTC 9 cut(s) 182, 299, 305, 388, 917, 991, 1120, 1283, 1291
HpaI GTTAAC 1 cut(s) 1203
HpaII CCGG 3 cut(s) 438, 595, 1112
HphI GGTGA 6 cut(s) 19, 333, 338, 448, 542, 556
Hpy166II GTNNAC 5 cut(s) 373, 478, 491, 916, 1203
Hpy188I TCNGA 7 cut(s) 76, 304, 508, 631, 667, 962, 1306
Hpy188III TCNNGA 9 cut(s) 385, 392, 733, 850, 1057, 1130, 1223, 1268, 1366
Hpy8I GTNNAC 5 cut(s) 373, 478, 491, 916, 1203
Hpy99I CGWCG 1 cut(s) 991
HpyAV CCTTC 6 cut(s) 217, 982, 1054, 1145, 1234, 1400
HpyCH4III ACNGT 2 cut(s) 700, 835
HpyCH4IV ACGT 5 cut(s) 159, 808, 823, 922, 1077
HpyCH4V TGCA 8 cut(s) 197, 267, 491, 574, 864, 934, 1088, 1331
HpyF10VI GCNNNNNNNGC 3 cut(s) 249, 521, 866
HpyF3I CTNAG 7 cut(s) 217, 449, 507, 628, 710, 716, 948
HpySE526I ACGT 5 cut(s) 159, 808, 823, 922, 1077
Hsp92I GRCGYC 1 cut(s) 548
KspAI GTTAAC 1 cut(s) 1203
Kzo9I GATC 5 cut(s) 82, 144, 724, 1053, 1316
LmnI GCTCC 2 cut(s) 1003, 1307
Lsp1109I GCAGC 5 cut(s) 8, 603, 614, 901, 1018
LweI GCATC 1 cut(s) 1348
MaeI CTAG 2 cut(s) 423, 525
MaeII ACGT 5 cut(s) 159, 808, 823, 922, 1077
MaeIII GTNAC 7 cut(s) 326, 339, 544, 761, 815, 824, 1151
MalI GATC 5 cut(s) 84, 146, 726, 1055, 1318
MboI GATC 5 cut(s) 82, 144, 724, 1053, 1316
MboII GAAGA 6 cut(s) 329, 697, 700, 1114, 1286, 1331
MfeI CAATTG 2 cut(s) 416, 1089
MflI RGATCY 1 cut(s) 1316
MhlI GDGCHC 3 cut(s) 261, 493, 517
MluCI AATT 3 cut(s) 284, 416, 1089
MlyI GAGTC 6 cut(s) 176, 299, 308, 911, 1000, 1114
MmeI TCCRAC 4 cut(s) 70, 215, 327, 519
Mph1103I ATGCAT 1 cut(s) 576
MroXI GAANNNNTTC 1 cut(s) 1373
MseI TTAA 4 cut(s) 65, 177, 1202, 1408
MslI CAYNNNNRTG 2 cut(s) 1356, 1377
MspI CCGG 3 cut(s) 438, 595, 1112
MspR9I CCNGG 2 cut(s) 596, 1260
MunI CAATTG 2 cut(s) 416, 1089
Mva1269I GAATGC 1 cut(s) 936
MvaI CCWGG 1 cut(s) 1260
MwoI GCNNNNNNNGC 3 cut(s) 249, 521, 866
NciI CCSGG 1 cut(s) 596
NcoI CCATGG 2 cut(s) 273, 366
NdeI CATATG 1 cut(s) 1353
NdeII GATC 5 cut(s) 82, 144, 724, 1053, 1316
NlaIV GGNNCC 5 cut(s) 61, 94, 281, 875, 1257
NmeAIII GCCGAG 2 cut(s) 322, 910
NmuCI GTSAC 4 cut(s) 326, 339, 544, 1151
NsiI ATGCAT 1 cut(s) 576
NspI RCATGY 1 cut(s) 470
PaeR7I CTCGAG 2 cut(s) 254, 731
PagI TCATGA 2 cut(s) 391, 1267
PcsI WCGNNNNNNNCGW 1 cut(s) 972
PctI GAATGC 1 cut(s) 936
PdmI GAANNNNTTC 1 cut(s) 1373
PfeI GAWTC 3 cut(s) 388, 1283, 1291
PfoI TCCNGGA 1 cut(s) 1258
PkrI GCNGC 8 cut(s) 23, 227, 245, 593, 601, 604, 891, 1033
Ple19I CGATCG 1 cut(s) 1056
PleI GAGTC 6 cut(s) 176, 299, 307, 911, 999, 1114
PpsI GAGTC 6 cut(s) 176, 299, 307, 911, 999, 1114
Ppu21I YACGTR 2 cut(s) 923, 1078
Psp124BI GAGCTC 1 cut(s) 261
Psp6I CCWGG 1 cut(s) 1258
PspGI CCWGG 1 cut(s) 1258
PspN4I GGNNCC 5 cut(s) 61, 94, 281, 875, 1257
PspPI GGNCC 4 cut(s) 280, 482, 1160, 1256
PspXI VCTCGAGB 1 cut(s) 254
PsuI RGATCY 1 cut(s) 1316
PvuI CGATCG 1 cut(s) 1056
RsaI GTAC 3 cut(s) 675, 799, 956
RsaNI GTAC 3 cut(s) 674, 798, 955
RseI CAYNNNNRTG 2 cut(s) 1356, 1377
SacI GAGCTC 1 cut(s) 261
SaqAI TTAA 4 cut(s) 65, 177, 1202, 1408
SatI GCNGC 8 cut(s) 22, 226, 244, 592, 600, 603, 890, 1032
Sau3AI GATC 5 cut(s) 82, 144, 724, 1053, 1316
Sau96I GGNCC 4 cut(s) 280, 482, 1160, 1256
ScaI AGTACT 1 cut(s) 799
SchI GAGTC 6 cut(s) 176, 299, 308, 911, 1000, 1114
ScrFI CCNGG 2 cut(s) 596, 1260
SduI GDGCHC 3 cut(s) 261, 493, 517
SfaNI GCATC 1 cut(s) 1348
SfcI CTRYAG 1 cut(s) 376
Sfr274I CTCGAG 2 cut(s) 254, 731
SinI GGWCC 2 cut(s) 280, 1256
SlaI CTCGAG 2 cut(s) 254, 731
SmiMI CAYNNNNRTG 2 cut(s) 1356, 1377
SmlI CTYRAG 3 cut(s) 254, 731, 740
SmoI CTYRAG 3 cut(s) 254, 731, 740
Sse9I AATT 3 cut(s) 284, 416, 1089
SsiI CCGC 6 cut(s) 226, 243, 246, 599, 644, 813
SspMI CTAG 2 cut(s) 423, 525
SstI GAGCTC 1 cut(s) 261
StyD4I CCNGG 2 cut(s) 594, 1258
StyI CCWWGG 3 cut(s) 273, 366, 1156
TaaI ACNGT 2 cut(s) 700, 835
TaiI ACGT 5 cut(s) 162, 811, 826, 925, 1080
TaqI TCGA 9 cut(s) 255, 261, 291, 315, 732, 928, 975, 1056, 1067
TasI AATT 3 cut(s) 284, 416, 1089
TatI WGTACW 2 cut(s) 673, 797
TauI GCSGC 3 cut(s) 228, 246, 602
TfiI GAWTC 3 cut(s) 388, 1283, 1291
Tru1I TTAA 4 cut(s) 65, 177, 1202, 1408
Tru9I TTAA 4 cut(s) 65, 177, 1202, 1408
TscAI CASTG 2 cut(s) 36, 703
TseFI GTSAC 4 cut(s) 326, 339, 544, 1151
TseI GCWGC 5 cut(s) 21, 591, 602, 889, 1031
Tsp45I GTSAC 4 cut(s) 326, 339, 544, 1151
TspDTI ATGAA 6 cut(s) 277, 380, 408, 490, 1127, 1275
TspRI CASTG 2 cut(s) 36, 703
VneI GTGCAC 1 cut(s) 489
VpaK11BI GGWCC 2 cut(s) 280, 1256
XceI RCATGY 1 cut(s) 470
XhoI CTCGAG 2 cut(s) 254, 731
XmnI GAANNNNTTC 1 cut(s) 1373
XspI CTAG 2 cut(s) 423, 525
ZrmI AGTACT 1 cut(s) 799
Zsp2I ATGCAT 1 cut(s) 576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.