Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 130 |
| AfaI | GTAC | 1 cut(s) | 67 |
| AgsI | TTSAA | 4 cut(s) | 13, 105, 137, 143 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 174 |
| AluBI | AGCT | 2 cut(s) | 86, 235 |
| AluI | AGCT | 2 cut(s) | 86, 235 |
| Alw21I | GWGCWC | 1 cut(s) | 81 |
| Alw26I | GTCTC | 2 cut(s) | 161, 182 |
| ApeKI | GCWGC | 1 cut(s) | 26 |
| AsuHPI | GGTGA | 1 cut(s) | 83 |
| Bbv12I | GWGCWC | 1 cut(s) | 81 |
| BbvI | GCAGC | 1 cut(s) | 13 |
| BclI | TGATCA | 1 cut(s) | 198 |
| BcoDI | GTCTC | 2 cut(s) | 161, 182 |
| BisI | GCNGC | 1 cut(s) | 27 |
| BlsI | GCNGC | 1 cut(s) | 28 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 174 |
| BmsI | GCATC | 2 cut(s) | 13, 205 |
| BpmI | CTGGAG | 1 cut(s) | 108 |
| BsaI | GGTCTC | 1 cut(s) | 182 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 81, 111 |
| Bse1I | ACTGG | 2 cut(s) | 73, 178 |
| BseNI | ACTGG | 2 cut(s) | 73, 178 |
| BseXI | GCAGC | 1 cut(s) | 13 |
| BseYI | CCCAGC | 1 cut(s) | 29 |
| BsiHKAI | GWGCWC | 1 cut(s) | 81 |
| BslFI | GGGAC | 1 cut(s) | 205 |
| BsmAI | GTCTC | 2 cut(s) | 161, 182 |
| BsmFI | GGGAC | 1 cut(s) | 205 |
| Bso31I | GGTCTC | 1 cut(s) | 182 |
| Bsp1286I | GDGCHC | 1 cut(s) | 81 |
| Bsp143I | GATC | 1 cut(s) | 198 |
| BspACI | CCGC | 1 cut(s) | 130 |
| BspTNI | GGTCTC | 1 cut(s) | 182 |
| BsrI | ACTGG | 2 cut(s) | 73, 178 |
| BssMI | GATC | 1 cut(s) | 198 |
| BstKTI | GATC | 1 cut(s) | 201 |
| BstMAI | GTCTC | 2 cut(s) | 161, 182 |
| BstMBI | GATC | 1 cut(s) | 198 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 224 |
| BstV1I | GCAGC | 1 cut(s) | 13 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 188 |
| Csp6I | GTAC | 1 cut(s) | 66 |
| CviAII | CATG | 4 cut(s) | 16, 52, 93, 124 |
| CviJI | RGCY | 2 cut(s) | 86, 235 |
| CviKI_1 | RGCY | 2 cut(s) | 86, 235 |
| CviQI | GTAC | 1 cut(s) | 66 |
| DpnI | GATC | 1 cut(s) | 200 |
| DpnII | GATC | 1 cut(s) | 198 |
| DriI | GACNNNNNGTC | 1 cut(s) | 174 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 174 |
| EciI | GGCGGA | 1 cut(s) | 119 |
| Eco31I | GGTCTC | 1 cut(s) | 182 |
| FaeI | CATG | 4 cut(s) | 19, 55, 96, 127 |
| FaiI | YATR | 6 cut(s) | 17, 53, 94, 125, 162, 240 |
| FaqI | GGGAC | 1 cut(s) | 205 |
| FatI | CATG | 4 cut(s) | 15, 51, 92, 123 |
| FbaI | TGATCA | 1 cut(s) | 198 |
| Fnu4HI | GCNGC | 1 cut(s) | 27 |
| Fsp4HI | GCNGC | 1 cut(s) | 27 |
| GluI | GCNGC | 1 cut(s) | 27 |
| GsaI | CCCAGC | 1 cut(s) | 33 |
| GsuI | CTGGAG | 1 cut(s) | 108 |
| Hin1II | CATG | 4 cut(s) | 19, 55, 96, 127 |
| HphI | GGTGA | 1 cut(s) | 83 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 211 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 224 |
| Hsp92II | CATG | 4 cut(s) | 19, 55, 96, 127 |
| Ksp22I | TGATCA | 1 cut(s) | 198 |
| Kzo9I | GATC | 1 cut(s) | 198 |
| LmnI | GCTCC | 3 cut(s) | 84, 89, 132 |
| LpnPI | CCDG | 4 cut(s) | 15, 54, 72, 159 |
| Lsp1109I | GCAGC | 1 cut(s) | 13 |
| LweI | GCATC | 2 cut(s) | 13, 205 |
| MalI | GATC | 1 cut(s) | 200 |
| MboI | GATC | 1 cut(s) | 198 |
| MhlI | GDGCHC | 1 cut(s) | 81 |
| MluCI | AATT | 2 cut(s) | 34, 206 |
| MnlI | CCTC | 3 cut(s) | 67, 195, 217 |
| MseI | TTAA | 1 cut(s) | 113 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 224 |
| NdeII | GATC | 1 cut(s) | 198 |
| NlaIII | CATG | 4 cut(s) | 19, 55, 96, 127 |
| PkrI | GCNGC | 1 cut(s) | 28 |
| PspFI | CCCAGC | 1 cut(s) | 29 |
| RsaI | GTAC | 1 cut(s) | 67 |
| RsaNI | GTAC | 1 cut(s) | 66 |
| SaqAI | TTAA | 1 cut(s) | 113 |
| SatI | GCNGC | 1 cut(s) | 27 |
| Sau3AI | GATC | 1 cut(s) | 198 |
| SduI | GDGCHC | 1 cut(s) | 81 |
| SetI | ASST | 4 cut(s) | 78, 88, 156, 237 |
| SfaNI | GCATC | 2 cut(s) | 13, 205 |
| Sse9I | AATT | 2 cut(s) | 34, 206 |
| SsiI | CCGC | 1 cut(s) | 130 |
| TasI | AATT | 2 cut(s) | 34, 206 |
| Tru1I | TTAA | 1 cut(s) | 113 |
| Tru9I | TTAA | 1 cut(s) | 113 |
| TseI | GCWGC | 1 cut(s) | 26 |
| TspDTI | ATGAA | 1 cut(s) | 40 |