Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 214 |
| AcsI | RAATTY | 1 cut(s) | 20 |
| AcuI | CTGAAG | 2 cut(s) | 104, 372 |
| AfaI | GTAC | 1 cut(s) | 44 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 12, 195 |
| AgsI | TTSAA | 6 cut(s) | 151, 194, 223, 229, 347, 419 |
| AluBI | AGCT | 5 cut(s) | 79, 269, 350, 356, 382 |
| AluI | AGCT | 5 cut(s) | 79, 269, 350, 356, 382 |
| Alw26I | GTCTC | 1 cut(s) | 281 |
| AoxI | GGCC | 3 cut(s) | 3, 170, 361 |
| ApeKI | GCWGC | 1 cut(s) | 209 |
| ApoI | RAATTY | 1 cut(s) | 20 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 20, 114, 289 |
| AspS9I | GGNCC | 2 cut(s) | 171, 361 |
| AsuHPI | GGTGA | 1 cut(s) | 347 |
| BbvI | GCAGC | 1 cut(s) | 196 |
| BccI | CCATC | 2 cut(s) | 183, 230 |
| BcoDI | GTCTC | 1 cut(s) | 281 |
| BfaI | CTAG | 2 cut(s) | 156, 243 |
| BfuAI | ACCTGC | 1 cut(s) | 214 |
| BglII | AGATCT | 1 cut(s) | 245 |
| BisI | GCNGC | 1 cut(s) | 210 |
| BlsI | GCNGC | 1 cut(s) | 211 |
| BmgT120I | GGNCC | 2 cut(s) | 171, 361 |
| BmiI | GGNNCC | 2 cut(s) | 173, 362 |
| BmsI | GCATC | 1 cut(s) | 78 |
| BsaI | GGTCTC | 1 cut(s) | 281 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 12, 195 |
| Bse1I | ACTGG | 1 cut(s) | 44 |
| BseGI | GGATG | 1 cut(s) | 204 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 12, 195 |
| BseMII | CTCAG | 1 cut(s) | 123 |
| BseNI | ACTGG | 1 cut(s) | 44 |
| BseXI | GCAGC | 1 cut(s) | 196 |
| BshFI | GGCC | 3 cut(s) | 5, 172, 363 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 12, 195 |
| BsmAI | GTCTC | 1 cut(s) | 281 |
| BsnI | GGCC | 3 cut(s) | 5, 172, 363 |
| Bso31I | GGTCTC | 1 cut(s) | 281 |
| Bsp143I | GATC | 2 cut(s) | 245, 391 |
| BspANI | GGCC | 3 cut(s) | 5, 172, 363 |
| BspCNI | CTCAG | 1 cut(s) | 124 |
| BspLI | GGNNCC | 2 cut(s) | 173, 362 |
| BspMI | ACCTGC | 1 cut(s) | 214 |
| BspTNI | GGTCTC | 1 cut(s) | 281 |
| BsrI | ACTGG | 1 cut(s) | 44 |
| BssMI | GATC | 2 cut(s) | 245, 391 |
| Bst4CI | ACNGT | 2 cut(s) | 290, 323 |
| BstC8I | GCNNGC | 1 cut(s) | 384 |
| BstDEI | CTNAG | 1 cut(s) | 132 |
| BstF5I | GGATG | 1 cut(s) | 204 |
| BstKTI | GATC | 2 cut(s) | 248, 394 |
| BstMAI | GTCTC | 1 cut(s) | 281 |
| BstMBI | GATC | 2 cut(s) | 245, 391 |
| BstV1I | GCAGC | 1 cut(s) | 196 |
| BstX2I | RGATCY | 1 cut(s) | 245 |
| BstYI | RGATCY | 1 cut(s) | 245 |
| BsuRI | GGCC | 3 cut(s) | 5, 172, 363 |
| BtsCI | GGATG | 1 cut(s) | 204 |
| BveI | ACCTGC | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 1 cut(s) | 384 |
| Cfr13I | GGNCC | 2 cut(s) | 171, 361 |
| Csp6I | GTAC | 1 cut(s) | 43 |
| CviQI | GTAC | 1 cut(s) | 43 |
| DdeI | CTNAG | 1 cut(s) | 132 |
| DpnI | GATC | 2 cut(s) | 247, 393 |
| DpnII | GATC | 2 cut(s) | 245, 391 |
| Eco31I | GGTCTC | 1 cut(s) | 281 |
| Eco57I | CTGAAG | 2 cut(s) | 104, 372 |
| EcoO109I | RGGNCCY | 2 cut(s) | 171, 361 |
| EcoRI | GAATTC | 1 cut(s) | 20 |
| EcoT22I | ATGCAT | 1 cut(s) | 71 |
| FaiI | YATR | 4 cut(s) | 99, 126, 252, 326 |
| Fnu4HI | GCNGC | 1 cut(s) | 210 |
| FokI | GGATG | 1 cut(s) | 211 |
| Fsp4HI | GCNGC | 1 cut(s) | 210 |
| FspBI | CTAG | 2 cut(s) | 156, 243 |
| GluI | GCNGC | 1 cut(s) | 210 |
| HaeIII | GGCC | 3 cut(s) | 5, 172, 363 |
| HindIII | AAGCTT | 2 cut(s) | 354, 380 |
| HphI | GGTGA | 1 cut(s) | 347 |
| Hpy166II | GTNNAC | 2 cut(s) | 37, 315 |
| Hpy188III | TCNNGA | 1 cut(s) | 243 |
| Hpy8I | GTNNAC | 2 cut(s) | 37, 315 |
| HpyAV | CCTTC | 1 cut(s) | 200 |
| HpyCH4III | ACNGT | 2 cut(s) | 290, 323 |
| HpyCH4V | TGCA | 3 cut(s) | 69, 212, 254 |
| HpyF3I | CTNAG | 1 cut(s) | 132 |
| Kzo9I | GATC | 2 cut(s) | 245, 391 |
| LpnPI | CCDG | 6 cut(s) | 25, 164, 219, 240, 255, 279 |
| Lsp1109I | GCAGC | 1 cut(s) | 196 |
| LweI | GCATC | 1 cut(s) | 78 |
| MaeI | CTAG | 2 cut(s) | 156, 243 |
| MaeIII | GTNAC | 1 cut(s) | 184 |
| MalI | GATC | 2 cut(s) | 247, 393 |
| MboI | GATC | 2 cut(s) | 245, 391 |
| MboII | GAAGA | 2 cut(s) | 16, 110 |
| MflI | RGATCY | 1 cut(s) | 245 |
| MluCI | AATT | 4 cut(s) | 20, 111, 217, 224 |
| MnlI | CCTC | 1 cut(s) | 51 |
| Mph1103I | ATGCAT | 1 cut(s) | 71 |
| MroXI | GAANNNNTTC | 3 cut(s) | 20, 114, 289 |
| MseI | TTAA | 3 cut(s) | 306, 377, 402 |
| NdeII | GATC | 2 cut(s) | 245, 391 |
| NlaIV | GGNNCC | 2 cut(s) | 173, 362 |
| NsiI | ATGCAT | 1 cut(s) | 71 |
| PdmI | GAANNNNTTC | 3 cut(s) | 20, 114, 289 |
| PkrI | GCNGC | 1 cut(s) | 211 |
| PspN4I | GGNNCC | 2 cut(s) | 173, 362 |
| PspPI | GGNCC | 2 cut(s) | 171, 361 |
| PsuI | RGATCY | 1 cut(s) | 245 |
| RsaI | GTAC | 1 cut(s) | 44 |
| RsaNI | GTAC | 1 cut(s) | 43 |
| SaqAI | TTAA | 3 cut(s) | 306, 377, 402 |
| SatI | GCNGC | 1 cut(s) | 210 |
| Sau3AI | GATC | 2 cut(s) | 245, 391 |
| Sau96I | GGNCC | 2 cut(s) | 171, 361 |
| SetI | ASST | 7 cut(s) | 81, 183, 208, 271, 352, 358, 384 |
| SfaNI | GCATC | 1 cut(s) | 78 |
| Sse9I | AATT | 4 cut(s) | 20, 111, 217, 224 |
| SspMI | CTAG | 2 cut(s) | 156, 243 |
| TaaI | ACNGT | 2 cut(s) | 290, 323 |
| TasI | AATT | 4 cut(s) | 20, 111, 217, 224 |
| Tru1I | TTAA | 3 cut(s) | 306, 377, 402 |
| Tru9I | TTAA | 3 cut(s) | 306, 377, 402 |
| TseI | GCWGC | 1 cut(s) | 209 |
| TspDTI | ATGAA | 4 cut(s) | 16, 33, 71, 215 |
| XapI | RAATTY | 1 cut(s) | 20 |
| XbaI | TCTAGA | 1 cut(s) | 242 |
| XmnI | GAANNNNTTC | 3 cut(s) | 20, 114, 289 |
| XspI | CTAG | 2 cut(s) | 156, 243 |
| Zsp2I | ATGCAT | 1 cut(s) | 71 |