Ribonuclease H
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 343 |
| AcsI | RAATTY | 1 cut(s) | 366 |
| AfaI | GTAC | 2 cut(s) | 28, 250 |
| AflII | CTTAAG | 1 cut(s) | 356 |
| AgsI | TTSAA | 1 cut(s) | 71 |
| AluBI | AGCT | 5 cut(s) | 212, 235, 289, 361, 454 |
| AluI | AGCT | 5 cut(s) | 212, 235, 289, 361, 454 |
| Alw26I | GTCTC | 1 cut(s) | 391 |
| AlwI | GGATC | 1 cut(s) | 343 |
| ApoI | RAATTY | 1 cut(s) | 366 |
| AseI | ATTAAT | 2 cut(s) | 105, 132 |
| AspS9I | GGNCC | 2 cut(s) | 339, 378 |
| AvaII | GGWCC | 2 cut(s) | 339, 378 |
| BccI | CCATC | 2 cut(s) | 42, 318 |
| BciVI | GTATCC | 1 cut(s) | 74 |
| BclI | TGATCA | 1 cut(s) | 301 |
| BcoDI | GTCTC | 1 cut(s) | 391 |
| BfaI | CTAG | 2 cut(s) | 24, 209 |
| BfmI | CTRYAG | 1 cut(s) | 319 |
| BfrI | CTTAAG | 1 cut(s) | 356 |
| BfuI | GTATCC | 1 cut(s) | 74 |
| BmcAI | AGTACT | 1 cut(s) | 28 |
| Bme18I | GGWCC | 2 cut(s) | 339, 378 |
| BmgT120I | GGNCC | 2 cut(s) | 339, 378 |
| BmiI | GGNNCC | 1 cut(s) | 341 |
| Bsa29I | ATCGAT | 1 cut(s) | 99 |
| Bse1I | ACTGG | 1 cut(s) | 341 |
| BseCI | ATCGAT | 1 cut(s) | 99 |
| BseMII | CTCAG | 2 cut(s) | 402, 462 |
| BseNI | ACTGG | 1 cut(s) | 341 |
| BseRI | GAGGAG | 1 cut(s) | 433 |
| BshVI | ATCGAT | 1 cut(s) | 99 |
| BslFI | GGGAC | 2 cut(s) | 325, 509 |
| BsmAI | GTCTC | 1 cut(s) | 391 |
| BsmFI | GGGAC | 2 cut(s) | 325, 509 |
| Bsp143I | GATC | 2 cut(s) | 301, 348 |
| BspCNI | CTCAG | 2 cut(s) | 401, 463 |
| BspDI | ATCGAT | 1 cut(s) | 99 |
| BspHI | TCATGA | 1 cut(s) | 88 |
| BspLI | GGNNCC | 1 cut(s) | 341 |
| BspPI | GGATC | 1 cut(s) | 343 |
| BspTI | CTTAAG | 1 cut(s) | 356 |
| BsrI | ACTGG | 1 cut(s) | 341 |
| BssMI | GATC | 2 cut(s) | 301, 348 |
| Bst6I | CTCTTC | 1 cut(s) | 259 |
| BstAFI | CTTAAG | 1 cut(s) | 356 |
| BstC8I | GCNNGC | 2 cut(s) | 432, 452 |
| BstDEI | CTNAG | 3 cut(s) | 30, 388, 471 |
| BstKTI | GATC | 2 cut(s) | 304, 351 |
| BstMAI | GTCTC | 1 cut(s) | 391 |
| BstMBI | GATC | 2 cut(s) | 301, 348 |
| BstNSI | RCATGY | 1 cut(s) | 164 |
| BstSFI | CTRYAG | 1 cut(s) | 319 |
| Bsu15I | ATCGAT | 1 cut(s) | 99 |
| BsuI | GTATCC | 1 cut(s) | 74 |
| BsuTUI | ATCGAT | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 2 cut(s) | 432, 452 |
| CciI | TCATGA | 1 cut(s) | 88 |
| Cfr13I | GGNCC | 2 cut(s) | 339, 378 |
| ClaI | ATCGAT | 1 cut(s) | 99 |
| Csp6I | GTAC | 2 cut(s) | 27, 249 |
| CviAII | CATG | 3 cut(s) | 57, 89, 161 |
| CviJI | RGCY | 6 cut(s) | 212, 235, 289, 361, 430, 454 |
| CviKI_1 | RGCY | 6 cut(s) | 212, 235, 289, 361, 430, 454 |
| CviQI | GTAC | 2 cut(s) | 27, 249 |
| DdeI | CTNAG | 3 cut(s) | 30, 388, 471 |
| DpnI | GATC | 2 cut(s) | 303, 350 |
| DpnII | GATC | 2 cut(s) | 301, 348 |
| Eam1104I | CTCTTC | 1 cut(s) | 259 |
| EarI | CTCTTC | 1 cut(s) | 259 |
| Eco32I | GATATC | 2 cut(s) | 94, 311 |
| Eco47I | GGWCC | 2 cut(s) | 339, 378 |
| EcoRV | GATATC | 2 cut(s) | 94, 311 |
| FaeI | CATG | 3 cut(s) | 60, 92, 164 |
| FaiI | YATR | 9 cut(s) | 58, 78, 90, 155, 162, 216, 321, 479, 488 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 238, 270 |
| FaqI | GGGAC | 2 cut(s) | 325, 509 |
| FatI | CATG | 3 cut(s) | 56, 88, 160 |
| FbaI | TGATCA | 1 cut(s) | 301 |
| FspBI | CTAG | 2 cut(s) | 24, 209 |
| Hin1II | CATG | 3 cut(s) | 60, 92, 164 |
| HincII | GTYRAC | 2 cut(s) | 43, 463 |
| HindII | GTYRAC | 2 cut(s) | 43, 463 |
| HindIII | AAGCTT | 1 cut(s) | 287 |
| HinfI | GANTC | 3 cut(s) | 52, 85, 473 |
| HpaI | GTTAAC | 1 cut(s) | 463 |
| Hpy166II | GTNNAC | 3 cut(s) | 43, 395, 463 |
| Hpy188I | TCNGA | 3 cut(s) | 84, 348, 402 |
| Hpy188III | TCNNGA | 3 cut(s) | 89, 470, 494 |
| Hpy8I | GTNNAC | 3 cut(s) | 43, 395, 463 |
| HpyAV | CCTTC | 2 cut(s) | 353, 420 |
| HpyCH4V | TGCA | 2 cut(s) | 118, 434 |
| HpyF3I | CTNAG | 3 cut(s) | 30, 388, 471 |
| Hsp92II | CATG | 3 cut(s) | 60, 92, 164 |
| Ksp22I | TGATCA | 1 cut(s) | 301 |
| KspAI | GTTAAC | 1 cut(s) | 463 |
| Kzo9I | GATC | 2 cut(s) | 301, 348 |
| LpnPI | CCDG | 6 cut(s) | 186, 243, 322, 375, 464, 483 |
| MaeI | CTAG | 2 cut(s) | 24, 209 |
| MaeIII | GTNAC | 4 cut(s) | 143, 156, 332, 480 |
| MalI | GATC | 2 cut(s) | 303, 350 |
| MboI | GATC | 2 cut(s) | 301, 348 |
| MboII | GAAGA | 1 cut(s) | 246 |
| MluCI | AATT | 5 cut(s) | 9, 73, 106, 237, 366 |
| MlyI | GAGTC | 2 cut(s) | 46, 482 |
| MnlI | CCTC | 4 cut(s) | 216, 262, 363, 454 |
| MseI | TTAA | 5 cut(s) | 105, 132, 273, 357, 462 |
| MspCI | CTTAAG | 1 cut(s) | 356 |
| NdeII | GATC | 2 cut(s) | 301, 348 |
| NlaIII | CATG | 3 cut(s) | 60, 92, 164 |
| NlaIV | GGNNCC | 1 cut(s) | 341 |
| NspI | RCATGY | 1 cut(s) | 164 |
| PagI | TCATGA | 1 cut(s) | 88 |
| PfeI | GAWTC | 1 cut(s) | 85 |
| PleI | GAGTC | 2 cut(s) | 46, 481 |
| PpsI | GAGTC | 2 cut(s) | 46, 481 |
| PshBI | ATTAAT | 2 cut(s) | 105, 132 |
| PspN4I | GGNNCC | 1 cut(s) | 341 |
| PspPI | GGNCC | 2 cut(s) | 339, 378 |
| RsaI | GTAC | 2 cut(s) | 28, 250 |
| RsaNI | GTAC | 2 cut(s) | 27, 249 |
| SaqAI | TTAA | 5 cut(s) | 105, 132, 273, 357, 462 |
| Sau3AI | GATC | 2 cut(s) | 301, 348 |
| Sau96I | GGNCC | 2 cut(s) | 339, 378 |
| ScaI | AGTACT | 1 cut(s) | 28 |
| SchI | GAGTC | 2 cut(s) | 46, 482 |
| SetI | ASST | 7 cut(s) | 214, 237, 254, 291, 363, 394, 456 |
| SfcI | CTRYAG | 1 cut(s) | 319 |
| SinI | GGWCC | 2 cut(s) | 339, 378 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| Sse9I | AATT | 5 cut(s) | 9, 73, 106, 237, 366 |
| SspMI | CTAG | 2 cut(s) | 24, 209 |
| TaqI | TCGA | 1 cut(s) | 99 |
| TasI | AATT | 5 cut(s) | 9, 73, 106, 237, 366 |
| TatI | WGTACW | 1 cut(s) | 26 |
| TfiI | GAWTC | 1 cut(s) | 85 |
| Tru1I | TTAA | 5 cut(s) | 105, 132, 273, 357, 462 |
| Tru9I | TTAA | 5 cut(s) | 105, 132, 273, 357, 462 |
| Vha464I | CTTAAG | 1 cut(s) | 356 |
| VpaK11BI | GGWCC | 2 cut(s) | 339, 378 |
| VspI | ATTAAT | 2 cut(s) | 105, 132 |
| XapI | RAATTY | 1 cut(s) | 366 |
| XceI | RCATGY | 1 cut(s) | 164 |
| XspI | CTAG | 2 cut(s) | 24, 209 |
| ZrmI | AGTACT | 1 cut(s) | 28 |