Rmu_sc0001966.1_g000025

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001966.1
OG0000254
Physical Location & Seq
Forward (+)
129314 .. 134027
4714 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001966.1_g000025.1.cds

Sequence Viewer

Length: 1788 bp
atgggaaggatcggcggaaaagtcgttttcctaccgggtccgattcggcttggctgggtgtcttcgattaagctttcgggggaacggcggggcaaggcgacaccggagggaggctcggcgtggggcggcgatcccaggggagcccgggtcctgggccggaggaggccggaggttagagaactaaccgggtcgggtcgagagcaatccgccggacccaaatacgtcagagatgacaatgaaagttatttgatattcattgcttttggtgataaaaccttgccaagcaaaaaggattcggaaacacatattgttgtgcctctagtaagcttgttgatgttgatcacgccattgtcctctacaagagctagagacgcagcaaaactcgcagtagcatcatcgatggaggccatgaagtcgggaaacagaatttcacagaatggtggccttaggaactctagtattattgatacaagttataaacccccgcatgattgctccagcacttggagaagcatttctcatggtgctgtgctccttaggaaatgtctaaaatggagtgttggtgatggtagcttaatcaaattttggtttgatcattggcttctccccacacccctcatcagcccagctctccctactgctgacattaatatcaatgcaactatcaatgatttttggactgatgatggcgggaacttggatcttctctcctccatggtcccaggtgacattgtcaatcaaatcattaatattcccactggttttgatacttgcggttgtaactctttgatttggggagctacatctaatggttatttcactgtcaagtctgcctataattctaactttgattctctcagccttcaacatcctcattggacagttgtttggaagagcaatgtccctcctaagctgaaaactttcctctgggctgccctccatagaaagcttctaactaatgttcaaagagctaaacgaggtttcacttccacctccttatgtcctattttcaagactgctgatgaaactctcctccacttgttcagggattgtcctaggtctcttgctatctggaatgcttttctcaagcttggtactatccttaactctttctctctggattggaatggatgggtggctgcccaattgcattgccatgttgtgatcaagaacaatattaaatggtgcaatctctttatctttatttgttggttcatttgggaatggagaaataaggatgtttttgagccaaattttatcatgcccgtttgtgctaacaaagtaatttggagttatgctaaagaatggactagtgctaacttcaagctaaatactgatacagtccacagatatactgtgcttgcttggaagaaacctattgcaaattttcacaagttatatattgatgggattagatcttcatcaactggcaaaattggtgttgggggtgttatcagggatcatcttggtaattggatcgctgggttccaagttaatttgggaattggggagatccttgatctaatgcagaaagctaaattctctctccaccctcttggttatctcctcaagggctactcaaatattatagatgctatggggaatgctcacctctctcacattttcagagagggcaatatgacggctgactctttggcgaagaacagcatcaatcatgagcttggtccaatcatttttgagtgccctcctgttcatgttgtacaggcctatcttgatgtcatctctgctgtctctagagtaaggagatgttcttgctctaactcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-RVT

Protein Analysis

595

Amino Acids

66.19

Weight (kDa)

9.46

Isoelectric Point (pI)

30.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000254)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25671 FvH4_1g29782 FvH4_2g06731 FvH4_2g09413 FvH4_2g12061 FvH4_2g12671 FvH4_2g14202 FvH4_3g27901 FvH4_3g30492 FvH4_3g36953 FvH4_4g10141 FvH4_4g11162 FvH4_5g27995 FvH4_5g34262 FvH4_6g10681 FvH4_6g13733 FvH4_6g18164 FvH4_6g25491 FvH4_6g25791 FvH4_6g27023 FvH4_6g34321 FvH4_7g05070
pyrus_communis pycom04g06850
rosa_chinensis RchiOBHm_Chr1g0322281 RchiOBHm_Chr1g0334981 RchiOBHm_Chr1g0371181 RchiOBHm_Chr2g0125461 RchiOBHm_Chr2g0127141 RchiOBHm_Chr2g0128961 RchiOBHm_Chr2g0132921 RchiOBHm_Chr3g0486471 RchiOBHm_Chr3g0492911 RchiOBHm_Chr4g0412131 RchiOBHm_Chr4g0426941 RchiOBHm_Chr4g0437331 RchiOBHm_Chr5g0018821 RchiOBHm_Chr5g0040021 RchiOBHm_Chr5g0051041 RchiOBHm_Chr6g0266871 RchiOBHm_Chr6g0271761 RchiOBHm_Chr7g0200931 RchiOBHm_Chr7g0220091
rosa_multiflora Rmu_co7991344.1_g000001 Rmu_sc0000172.1_g000008 Rmu_sc0000194.1_g000010 Rmu_sc0000446.1_g000026 Rmu_sc0000496.1_g000011 Rmu_sc0000530.1_g000013 Rmu_sc0000706.1_g000044 Rmu_sc0000745.1_g000029 Rmu_sc0001301.1_g000027 Rmu_sc0001520.1_g000008 Rmu_sc0001966.1_g000025 Rmu_sc0001989.1_g000007 Rmu_sc0002239.1_g000002 Rmu_sc0002816.1_g000004 Rmu_sc0003458.1_g000001 Rmu_sc0003825.1_g000031 Rmu_sc0003919.1_g000002 Rmu_sc0004053.1_g000007 Rmu_sc0004161.1_g000008 Rmu_sc0004368.1_g000033 Rmu_sc0004383.1_g000002 Rmu_sc0004923.1_g000002 Rmu_sc0005065.1_g000001 Rmu_sc0005478.1_g000001 Rmu_sc0006847.1_g000031 Rmu_sc0009556.1_g000002 Rmu_sc0010783.1_g000007 Rmu_sc0011424.1_g000022 Rmu_sc0013205.1_g000002 Rmu_sc0017407.1_g000001 Rmu_sc0023757.1_g000002 Rmu_sc0032346.1_g000001 Rmu_ssc0000008.1_g000014 Rmu_ssc0000158.1_g000033 Rmu_ssc0000217.1_g000028
rosa_roxburghii Rroxscaffold_1G00000480 Rroxscaffold_1G00026050 Rroxscaffold_1G00026250 Rroxscaffold_2G00085120 Rroxscaffold_2G00119710 Rroxscaffold_2G00126610 Rroxscaffold_2G00129340 Rroxscaffold_3G00245550 Rroxscaffold_5G00340210 Rroxscaffold_5G00340330 Rroxscaffold_6G00397180 Rroxscaffold_7G00216160
rosa_rugosa Rorug01G0040000 Rorug01G0067400 Rorug01G0092300 Rorug01G0197000 Rorug01G0474200 Rorug01G0482500 Rorug01G0489300 Rorug02G0142900 Rorug02G0259000 Rorug02G0283200 Rorug02G0341400 Rorug02G0341600 Rorug02G0370900 Rorug02G0379700 Rorug02G0386100 Rorug02G0387300 Rorug03G0112600 Rorug03G0265600 Rorug03G0298800 Rorug04G0019500 Rorug05G0069900 Rorug05G0070500 Rorug05G0256800 Rorug05G0287300 Rorug05G0592000 Rorug06G0057800 Rorug06G0082000 Rorug06G0118900 Rorug06G0176500 Rorug06G0423100 Rorug07G0050100 Rorug07G0095100 Rorug07G0202100 Rorug07G0216600 Rorug07G0244300 Rorug07G0245500
rosa_samantha Rh1DG154800 Rh2CG613000 Rh6BG016600 Rh6BG475100 Rh6CG013200 Rh7AG443800
rosa_wichuraiana Rw0G021840 Rw4G023650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 477
AccB7I CCANNNNNTGG 1 cut(s) 504
AciI CCGC 7 cut(s) 15, 88, 126, 207, 485, 690, 774
AclWI GGATC 6 cut(s) 17, 125, 708, 1467, 1484, 1507
AcsI RAATTY 5 cut(s) 426, 581, 1252, 1384, 1538
AfaI GTAC 2 cut(s) 1096, 1722
AfiI CCNNNNNNNGG 3 cut(s) 110, 151, 504
AgsI TTSAA 4 cut(s) 866, 965, 1012, 1324
AhlI ACTAGT 1 cut(s) 1310
AjnI CCWGG 3 cut(s) 134, 150, 721
Alw21I GWGCWC 1 cut(s) 534
Alw26I GTCTC 3 cut(s) 363, 1065, 1756
AlwI GGATC 6 cut(s) 17, 125, 708, 1467, 1484, 1507
Ama87I CYCGRG 1 cut(s) 144
AoxI GGCC 5 cut(s) 154, 164, 405, 442, 1725
ApeKI GCWGC 3 cut(s) 374, 932, 1139
ApoI RAATTY 5 cut(s) 426, 581, 1252, 1384, 1538
AseI ATTAAT 2 cut(s) 648, 747
Asp700I GAANNNNTTC 2 cut(s) 514, 920
AspA2I CCTAGG 1 cut(s) 1055
AspS9I GGNCC 6 cut(s) 38, 148, 154, 212, 718, 1685
AsuC2I CCSGG 4 cut(s) 36, 145, 146, 187
AsuHPI GGTGA 4 cut(s) 278, 575, 737, 1601
AvaI CYCGRG 1 cut(s) 144
AvaII GGWCC 5 cut(s) 38, 148, 212, 718, 1685
AvrII CCTAGG 1 cut(s) 1055
AxyI CCTNAGG 2 cut(s) 446, 536
BaeGI GKGCMC 1 cut(s) 1706
BanII GRGCYC 1 cut(s) 145
BbsI GAAGAC 1 cut(s) 54
Bbv12I GWGCWC 1 cut(s) 534
BbvI GCAGC 3 cut(s) 386, 919, 1126
BccI CCATC 5 cut(s) 394, 560, 680, 1125, 1400
BceAI ACGGC 2 cut(s) 101, 1659
BciT130I CCWGG 3 cut(s) 136, 152, 723
BclI TGATCA 3 cut(s) 339, 592, 1164
BcnI CCSGG 4 cut(s) 36, 145, 146, 187
BcoDI GTCTC 3 cut(s) 363, 1065, 1756
BcuI ACTAGT 1 cut(s) 1310
BfaI CTAG 6 cut(s) 320, 366, 456, 1056, 1311, 1755
BglII AGATCT 1 cut(s) 1415
BisI GCNGC 4 cut(s) 127, 375, 933, 1140
BlnI CCTAGG 1 cut(s) 1055
BlsI GCNGC 4 cut(s) 128, 376, 934, 1141
Bme1390I CCNGG 7 cut(s) 36, 136, 145, 146, 152, 187, 723
Bme18I GGWCC 5 cut(s) 38, 148, 212, 718, 1685
BmeT110I CYCGRG 1 cut(s) 144
BmgT120I GGNCC 6 cut(s) 38, 148, 154, 212, 718, 1685
BmiI GGNNCC 6 cut(s) 39, 142, 149, 214, 720, 1487
BmrFI CCNGG 7 cut(s) 36, 136, 145, 146, 152, 187, 723
BmsI GCATC 3 cut(s) 401, 1582, 1677
BpiI GAAGAC 1 cut(s) 54
BplI GAGNNNNNCTC 2 cut(s) 98, 130
BpmI CTGGAG 1 cut(s) 481
Bpu10I CCTNAGC 1 cut(s) 909
BpuEI CTTGAG 2 cut(s) 1070, 1553
BpuMI CCSGG 4 cut(s) 36, 145, 146, 187
Bsa29I ATCGAT 1 cut(s) 398
BsaBI GATNNNNATC 2 cut(s) 338, 1420
BsaI GGTCTC 1 cut(s) 1065
BsaJI CCNNGG 7 cut(s) 134, 135, 144, 151, 714, 721, 1055
BsaWI WCCGGW 1 cut(s) 103
BsaXI ACNNNNNCTCC 4 cut(s) 132, 162, 547, 577
Bsc4I CCNNNNNNNGG 3 cut(s) 110, 151, 504
Bse1I ACTGG 2 cut(s) 763, 1432
Bse21I CCTNAGG 2 cut(s) 446, 536
Bse3DI GCAATG 3 cut(s) 255, 904, 1150
Bse8I GATNNNNATC 2 cut(s) 338, 1420
BseBI CCWGG 3 cut(s) 136, 152, 723
BseCI ATCGAT 1 cut(s) 398
BseDI CCNNGG 7 cut(s) 134, 135, 144, 151, 714, 721, 1055
BseGI GGATG 3 cut(s) 868, 1136, 1243
BseJI GATNNNNATC 2 cut(s) 338, 1420
BseLI CCNNNNNNNGG 3 cut(s) 110, 151, 504
BseMI GCAATG 3 cut(s) 255, 904, 1150
BseMII CTCAG 1 cut(s) 871
BseNI ACTGG 2 cut(s) 763, 1432
BseRI GAGGAG 4 cut(s) 175, 700, 1022, 1556
BseSI GKGCMC 1 cut(s) 1706
BseXI GCAGC 3 cut(s) 386, 919, 1126
BseYI CCCAGC 3 cut(s) 54, 625, 1481
BshFI GGCC 5 cut(s) 156, 166, 407, 444, 1727
BshVI ATCGAT 1 cut(s) 398
BsiHKAI GWGCWC 1 cut(s) 534
BsiHKCI CYCGRG 1 cut(s) 144
BsiSI CCGG 7 cut(s) 35, 104, 145, 157, 167, 186, 210
BslFI GGGAC 2 cut(s) 704, 887
BslI CCNNNNNNNGG 3 cut(s) 110, 151, 504
BsmAI GTCTC 3 cut(s) 363, 1065, 1756
BsmBI CGTCTC 1 cut(s) 363
BsmFI GGGAC 2 cut(s) 704, 887
BsmI GAATGC 2 cut(s) 1081, 1609
BsnI GGCC 5 cut(s) 156, 166, 407, 444, 1727
Bso31I GGTCTC 1 cut(s) 1065
BsoBI CYCGRG 1 cut(s) 144
Bsp1286I GDGCHC 3 cut(s) 145, 534, 1706
Bsp1407I TGTACA 1 cut(s) 1720
Bsp19I CCATGG 1 cut(s) 714
BspACI CCGC 7 cut(s) 15, 88, 126, 207, 485, 690, 774
BspANI GGCC 5 cut(s) 156, 166, 407, 444, 1727
BspCNI CTCAG 1 cut(s) 870
BspDI ATCGAT 1 cut(s) 398
BspHI TCATGA 1 cut(s) 1675
BspLI GGNNCC 6 cut(s) 39, 142, 149, 214, 720, 1487
BspPI GGATC 6 cut(s) 17, 125, 708, 1467, 1484, 1507
BspQI GCTCTTC 1 cut(s) 887
BspTNI GGTCTC 1 cut(s) 1065
BsrDI GCAATG 3 cut(s) 255, 904, 1150
BsrGI TGTACA 1 cut(s) 1720
BsrI ACTGG 2 cut(s) 763, 1432
BssECI CCNNGG 7 cut(s) 134, 135, 144, 151, 714, 721, 1055
BssT1I CCWWGG 2 cut(s) 714, 1055
Bst2UI CCWGG 3 cut(s) 136, 152, 723
Bst4CI ACNGT 4 cut(s) 823, 883, 1342, 1357
Bst6I CTCTTC 1 cut(s) 887
BstAUI TGTACA 1 cut(s) 1720
BstC8I GCNNGC 1 cut(s) 1362
BstDEI CTNAG 5 cut(s) 446, 536, 857, 909, 1785
BstDSI CCRYGG 1 cut(s) 714
BstF5I GGATG 3 cut(s) 868, 1136, 1243
BstMAI GTCTC 3 cut(s) 363, 1065, 1756
BstMWI GCNNNNNNNGC 2 cut(s) 371, 383
BstNI CCWGG 3 cut(s) 136, 152, 723
BstSCI CCNGG 7 cut(s) 34, 134, 143, 144, 150, 185, 721
BstSLI GKGCMC 1 cut(s) 1706
BstV1I GCAGC 3 cut(s) 386, 919, 1126
BstV2I GAAGAC 1 cut(s) 54
BstX2I RGATCY 3 cut(s) 700, 1415, 1512
BstXI CCANNNNNNTGG 1 cut(s) 1556
BstYI RGATCY 3 cut(s) 700, 1415, 1512
Bsu15I ATCGAT 1 cut(s) 398
Bsu36I CCTNAGG 2 cut(s) 446, 536
BsuRI GGCC 5 cut(s) 156, 166, 407, 444, 1727
BsuTUI ATCGAT 1 cut(s) 398
BtgI CCRYGG 1 cut(s) 714
BtsCI GGATG 3 cut(s) 868, 1136, 1243
BtsIMutI CAGTG 2 cut(s) 756, 819
Cac8I GCNNGC 1 cut(s) 1362
CciI TCATGA 1 cut(s) 1675
Cfr13I GGNCC 6 cut(s) 38, 148, 154, 212, 718, 1685
Cfr9I CCCGGG 1 cut(s) 144
ClaI ATCGAT 1 cut(s) 398
CseI GACGC 1 cut(s) 380
Csp6I GTAC 2 cut(s) 1095, 1721
CspCI CAANNNNNGTGG 2 cut(s) 745, 780
CviAII CATG 8 cut(s) 409, 488, 521, 715, 1157, 1261, 1676, 1715
CviQI GTAC 2 cut(s) 1095, 1721
DdeI CTNAG 5 cut(s) 446, 536, 857, 909, 1785
Eam1104I CTCTTC 1 cut(s) 887
EarI CTCTTC 1 cut(s) 887
EciI GGCGGA 2 cut(s) 30, 196
Eco130I CCWWGG 2 cut(s) 714, 1055
Eco147I AGGCCT 1 cut(s) 1727
Eco24I GRGCYC 1 cut(s) 145
Eco31I GGTCTC 1 cut(s) 1065
Eco47I GGWCC 5 cut(s) 38, 148, 212, 718, 1685
Eco81I CCTNAGG 2 cut(s) 446, 536
Eco88I CYCGRG 1 cut(s) 144
EcoO109I RGGNCCY 1 cut(s) 148
EcoRII CCWGG 3 cut(s) 134, 150, 721
EcoT14I CCWWGG 2 cut(s) 714, 1055
EcoT38I GRGCYC 1 cut(s) 145
ErhI CCWWGG 2 cut(s) 714, 1055
Esp3I CGTCTC 1 cut(s) 363
FaeI CATG 8 cut(s) 412, 491, 524, 718, 1160, 1264, 1679, 1718
FaqI GGGAC 2 cut(s) 704, 887
FatI CATG 8 cut(s) 408, 487, 520, 714, 1156, 1260, 1675, 1714
FauI CCCGC 3 cut(s) 81, 492, 683
FbaI TGATCA 3 cut(s) 339, 592, 1164
Fnu4HI GCNGC 4 cut(s) 127, 375, 933, 1140
FokI GGATG 3 cut(s) 855, 1143, 1250
FriOI GRGCYC 1 cut(s) 145
Fsp4HI GCNGC 4 cut(s) 127, 375, 933, 1140
FspBI CTAG 6 cut(s) 320, 366, 456, 1056, 1311, 1755
GluI GCNGC 4 cut(s) 127, 375, 933, 1140
GsaI CCCAGC 3 cut(s) 58, 629, 1485
GsuI CTGGAG 1 cut(s) 481
HaeIII GGCC 5 cut(s) 156, 166, 407, 444, 1727
HapII CCGG 7 cut(s) 35, 104, 145, 157, 167, 186, 210
HgaI GACGC 1 cut(s) 380
Hin1II CATG 8 cut(s) 412, 491, 524, 718, 1160, 1264, 1679, 1718
HindIII AAGCTT 4 cut(s) 71, 325, 947, 1088
HinfI GANTC 4 cut(s) 43, 293, 851, 1649
HpaII CCGG 7 cut(s) 35, 104, 145, 157, 167, 186, 210
HphI GGTGA 4 cut(s) 278, 575, 737, 1601
Hpy166II GTNNAC 1 cut(s) 1345
Hpy188I TCNGA 4 cut(s) 42, 227, 298, 1628
Hpy188III TCNNGA 9 cut(s) 197, 417, 1012, 1072, 1118, 1168, 1676, 1733, 1755
Hpy8I GTNNAC 1 cut(s) 1345
HpyAV CCTTC 1 cut(s) 872
HpyCH4III ACNGT 4 cut(s) 823, 883, 1342, 1357
HpyCH4IV ACGT 1 cut(s) 222
HpyCH4V TGCA 5 cut(s) 659, 1150, 1188, 1382, 1528
HpyF10VI GCNNNNNNNGC 2 cut(s) 371, 383
HpyF3I CTNAG 5 cut(s) 446, 536, 857, 909, 1785
HpySE526I ACGT 1 cut(s) 222
Hsp92II CATG 8 cut(s) 412, 491, 524, 718, 1160, 1264, 1679, 1718
Ksp22I TGATCA 3 cut(s) 339, 592, 1164
LguI GCTCTTC 1 cut(s) 887
LmnI GCTCC 4 cut(s) 140, 500, 537, 797
Lsp1109I GCAGC 3 cut(s) 386, 919, 1126
LweI GCATC 3 cut(s) 401, 1582, 1677
MaeI CTAG 6 cut(s) 320, 366, 456, 1056, 1311, 1755
MaeII ACGT 1 cut(s) 222
MaeIII GTNAC 2 cut(s) 725, 779
MboII GAAGA 6 cut(s) 54, 695, 904, 1381, 1410, 1672
MfeI CAATTG 1 cut(s) 1145
MflI RGATCY 3 cut(s) 700, 1415, 1512
MhlI GDGCHC 3 cut(s) 145, 534, 1706
MlyI GAGTC 1 cut(s) 1643
MroXI GAANNNNTTC 2 cut(s) 514, 920
MseI TTAA 7 cut(s) 69, 575, 648, 747, 1104, 1179, 1494
MslI CAYNNNNRTG 1 cut(s) 1155
MspI CCGG 7 cut(s) 35, 104, 145, 157, 167, 186, 210
MspR9I CCNGG 7 cut(s) 36, 136, 145, 146, 152, 187, 723
MunI CAATTG 1 cut(s) 1145
Mva1269I GAATGC 2 cut(s) 1081, 1609
MvaI CCWGG 3 cut(s) 136, 152, 723
MwoI GCNNNNNNNGC 2 cut(s) 371, 383
NciI CCSGG 4 cut(s) 36, 145, 146, 187
NcoI CCATGG 1 cut(s) 714
NlaIII CATG 8 cut(s) 412, 491, 524, 718, 1160, 1264, 1679, 1718
NlaIV GGNNCC 6 cut(s) 39, 142, 149, 214, 720, 1487
NmeAIII GCCGAG 1 cut(s) 95
NmuCI GTSAC 1 cut(s) 725
PagI TCATGA 1 cut(s) 1675
PasI CCCWGGG 1 cut(s) 135
PceI AGGCCT 1 cut(s) 1727
PciSI GCTCTTC 1 cut(s) 887
PctI GAATGC 2 cut(s) 1081, 1609
PdmI GAANNNNTTC 2 cut(s) 514, 920
PfeI GAWTC 3 cut(s) 43, 293, 851
PflFI GACNNNGTC 1 cut(s) 731
PflMI CCANNNNNTGG 1 cut(s) 504
PkrI GCNGC 4 cut(s) 128, 376, 934, 1141
PleI GAGTC 1 cut(s) 1643
PpsI GAGTC 1 cut(s) 1643
PpuMI RGGWCCY 1 cut(s) 148
PshBI ATTAAT 2 cut(s) 648, 747
PsiI TTATAA 1 cut(s) 477
Psp5II RGGWCCY 1 cut(s) 148
Psp6I CCWGG 3 cut(s) 134, 150, 721
PspFI CCCAGC 3 cut(s) 54, 625, 1481
PspGI CCWGG 3 cut(s) 134, 150, 721
PspN4I GGNNCC 6 cut(s) 39, 142, 149, 214, 720, 1487
PspPI GGNCC 6 cut(s) 38, 148, 154, 212, 718, 1685
PspPPI RGGWCCY 1 cut(s) 148
PsuI RGATCY 3 cut(s) 700, 1415, 1512
PsyI GACNNNGTC 1 cut(s) 731
RsaI GTAC 2 cut(s) 1096, 1722
RsaNI GTAC 2 cut(s) 1095, 1721
RseI CAYNNNNRTG 1 cut(s) 1155
SapI GCTCTTC 1 cut(s) 887
SaqAI TTAA 7 cut(s) 69, 575, 648, 747, 1104, 1179, 1494
SatI GCNGC 4 cut(s) 127, 375, 933, 1140
Sau96I GGNCC 6 cut(s) 38, 148, 154, 212, 718, 1685
SchI GAGTC 1 cut(s) 1643
ScrFI CCNGG 7 cut(s) 36, 136, 145, 146, 152, 187, 723
SduI GDGCHC 3 cut(s) 145, 534, 1706
SfaNI GCATC 3 cut(s) 401, 1582, 1677
SinI GGWCC 5 cut(s) 38, 148, 212, 718, 1685
SmaI CCCGGG 1 cut(s) 146
SmiMI CAYNNNNRTG 1 cut(s) 1155
SmlI CTYRAG 2 cut(s) 1085, 1568
SmoI CTYRAG 2 cut(s) 1085, 1568
SpeI ACTAGT 1 cut(s) 1310
SseBI AGGCCT 1 cut(s) 1727
SsiI CCGC 7 cut(s) 15, 88, 126, 207, 485, 690, 774
SspI AATATT 3 cut(s) 751, 1177, 1585
SspMI CTAG 6 cut(s) 320, 366, 456, 1056, 1311, 1755
StuI AGGCCT 1 cut(s) 1727
StyD4I CCNGG 7 cut(s) 34, 134, 143, 144, 150, 185, 721
StyI CCWWGG 2 cut(s) 714, 1055
TaaI ACNGT 4 cut(s) 823, 883, 1342, 1357
TaiI ACGT 1 cut(s) 225
TaqI TCGA 3 cut(s) 65, 196, 398
TatI WGTACW 1 cut(s) 1720
TauI GCSGC 1 cut(s) 129
TfiI GAWTC 3 cut(s) 43, 293, 851
Tru1I TTAA 7 cut(s) 69, 575, 648, 747, 1104, 1179, 1494
Tru9I TTAA 7 cut(s) 69, 575, 648, 747, 1104, 1179, 1494
TscAI CASTG 2 cut(s) 763, 826
TseFI GTSAC 1 cut(s) 725
TseI GCWGC 3 cut(s) 374, 932, 1139
Tsp45I GTSAC 1 cut(s) 725
TspDTI ATGAA 7 cut(s) 244, 252, 425, 1038, 1204, 1410, 1703
TspMI CCCGGG 1 cut(s) 144
TspRI CASTG 2 cut(s) 763, 826
Tth111I GACNNNGTC 1 cut(s) 731
Van91I CCANNNNNTGG 1 cut(s) 504
VpaK11BI GGWCC 5 cut(s) 38, 148, 212, 718, 1685
VspI ATTAAT 2 cut(s) 648, 747
XapI RAATTY 5 cut(s) 426, 581, 1252, 1384, 1538
XbaI TCTAGA 1 cut(s) 1754
XmaI CCCGGG 1 cut(s) 144
XmaJI CCTAGG 1 cut(s) 1055
XmnI GAANNNNTTC 2 cut(s) 514, 920
XspI CTAG 6 cut(s) 320, 366, 456, 1056, 1311, 1755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.