Rmu_sc0000446.1_g000026

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000446.1
OG0000254
Physical Location & Seq
Reverse (-)
143116 .. 147062
3947 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000446.1_g000026.1.cds

Sequence Viewer

Length: 1395 bp
atggtactgccaaattttggtggccatcggaggtggttgccgtggctcgtggggcccacgcgctgccactgttggtggcttgtggaggcgtgtaggattatcttggcgtgtgggacacgtcatgggaattcttttacgagttatggggaagccttatgtatttgtggttttacttcgtttcggatttcttatgccatacttagggtgactactatcattgctagcattgattttccgcctttgtggcgcggtgatgggatcaccgtagccctccgcctttgtggcgcaggttactgtctctgtgacagtaattctgtagcccgcacttggagaagcatttctcatggtgctgagctgctaaggaaatgcctaaaatggcgtgtgggtgatgggagctctattaagttttggcttgatcattggctctttccctcatccctcatctgtttggctcttcctactgctgccattaacatcaatgcaaccatcaatagcttttggactgatgagggctggaacctggatctcctctcgtccatggtcccaggtgatattgtcaatcaaattatcaatatccctactggttttgatcattgtggttgggattctttgatttggggagccacatctaatggtgccttcacagtcaagtttgcctataattctagttttgagttttccaacccccaaaattctcaatgggctgctgtttggaaaagttatgttcctcctaaactgaaaaccttcctgtgggctgctctccataagaagctgctaactaatgttcaaagggctagaagaggttttacctcctcctccttatgccctatctgcaaggctaatgttgaaaccctcatccatttgttcagggactatcctagatctcttgctatttggaatgcttttcttaaacctagggctatccttaactccttctccctagactggaatggttggattgctgctcaactgcactgtcagacactgattcagaataatattaaatggtgcaatcttttcatttttattttttggtttatttggaaatggagaaataaggttgtttttgatccaatgtttatcatgcctacttgtcctgatatagtgatctggaactatgctgtagaatggactaatgccaatgtcaaattaaatgttgatactgtctacagggaccatgtgggtaactggatcactggtttcctgatgctgaagcttgggattatgcagaaagctgaattctcccttcatccccttggttctcttctcaagggctgctcaaatatgatggatgctatggagaatgtccacctgtcccacatcttcagagaatgcaatatgactgctgactctttagctataaggaaagaattaatcatgagcttggtgtcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_3 zf-RVT

Protein Analysis

464

Amino Acids

52.92

Weight (kDa)

9.0

Isoelectric Point (pI)

33.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000254)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25671 FvH4_1g29782 FvH4_2g06731 FvH4_2g09413 FvH4_2g12061 FvH4_2g12671 FvH4_2g14202 FvH4_3g27901 FvH4_3g30492 FvH4_3g36953 FvH4_4g10141 FvH4_4g11162 FvH4_5g27995 FvH4_5g34262 FvH4_6g10681 FvH4_6g13733 FvH4_6g18164 FvH4_6g25491 FvH4_6g25791 FvH4_6g27023 FvH4_6g34321 FvH4_7g05070
pyrus_communis pycom04g06850
rosa_chinensis RchiOBHm_Chr1g0322281 RchiOBHm_Chr1g0334981 RchiOBHm_Chr1g0371181 RchiOBHm_Chr2g0125461 RchiOBHm_Chr2g0127141 RchiOBHm_Chr2g0128961 RchiOBHm_Chr2g0132921 RchiOBHm_Chr3g0486471 RchiOBHm_Chr3g0492911 RchiOBHm_Chr4g0412131 RchiOBHm_Chr4g0426941 RchiOBHm_Chr4g0437331 RchiOBHm_Chr5g0018821 RchiOBHm_Chr5g0040021 RchiOBHm_Chr5g0051041 RchiOBHm_Chr6g0266871 RchiOBHm_Chr6g0271761 RchiOBHm_Chr7g0200931 RchiOBHm_Chr7g0220091
rosa_multiflora Rmu_co7991344.1_g000001 Rmu_sc0000172.1_g000008 Rmu_sc0000194.1_g000010 Rmu_sc0000446.1_g000026 Rmu_sc0000496.1_g000011 Rmu_sc0000530.1_g000013 Rmu_sc0000706.1_g000044 Rmu_sc0000745.1_g000029 Rmu_sc0001301.1_g000027 Rmu_sc0001520.1_g000008 Rmu_sc0001966.1_g000025 Rmu_sc0001989.1_g000007 Rmu_sc0002239.1_g000002 Rmu_sc0002816.1_g000004 Rmu_sc0003458.1_g000001 Rmu_sc0003825.1_g000031 Rmu_sc0003919.1_g000002 Rmu_sc0004053.1_g000007 Rmu_sc0004161.1_g000008 Rmu_sc0004368.1_g000033 Rmu_sc0004383.1_g000002 Rmu_sc0004923.1_g000002 Rmu_sc0005065.1_g000001 Rmu_sc0005478.1_g000001 Rmu_sc0006847.1_g000031 Rmu_sc0009556.1_g000002 Rmu_sc0010783.1_g000007 Rmu_sc0011424.1_g000022 Rmu_sc0013205.1_g000002 Rmu_sc0017407.1_g000001 Rmu_sc0023757.1_g000002 Rmu_sc0032346.1_g000001 Rmu_ssc0000008.1_g000014 Rmu_ssc0000158.1_g000033 Rmu_ssc0000217.1_g000028
rosa_roxburghii Rroxscaffold_1G00000480 Rroxscaffold_1G00026050 Rroxscaffold_1G00026250 Rroxscaffold_2G00085120 Rroxscaffold_2G00119710 Rroxscaffold_2G00126610 Rroxscaffold_2G00129340 Rroxscaffold_3G00245550 Rroxscaffold_5G00340210 Rroxscaffold_5G00340330 Rroxscaffold_6G00397180 Rroxscaffold_7G00216160
rosa_rugosa Rorug01G0040000 Rorug01G0067400 Rorug01G0092300 Rorug01G0197000 Rorug01G0474200 Rorug01G0482500 Rorug01G0489300 Rorug02G0142900 Rorug02G0259000 Rorug02G0283200 Rorug02G0341400 Rorug02G0341600 Rorug02G0370900 Rorug02G0379700 Rorug02G0386100 Rorug02G0387300 Rorug03G0112600 Rorug03G0265600 Rorug03G0298800 Rorug04G0019500 Rorug05G0069900 Rorug05G0070500 Rorug05G0256800 Rorug05G0287300 Rorug05G0592000 Rorug06G0057800 Rorug06G0082000 Rorug06G0118900 Rorug06G0176500 Rorug06G0423100 Rorug07G0050100 Rorug07G0095100 Rorug07G0202100 Rorug07G0216600 Rorug07G0244300 Rorug07G0245500
rosa_samantha Rh1DG154800 Rh2CG613000 Rh6BG016600 Rh6BG475100 Rh6CG013200 Rh7AG443800
rosa_wichuraiana Rw0G021840 Rw4G023650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 278
AccB1I GGYRCC 1 cut(s) 635
AccB7I CCANNNNNTGG 1 cut(s) 17
AccI GTMKAC 1 cut(s) 1167
AccII CGCG 2 cut(s) 61, 249
AciI CCGC 4 cut(s) 236, 249, 274, 322
AclWI GGATC 4 cut(s) 266, 531, 1064, 1199
AcoI YGGCCR 1 cut(s) 22
AcsI RAATTY 4 cut(s) 13, 127, 691, 1238
AcuI CTGAAG 2 cut(s) 1232, 1309
AfaI GTAC 1 cut(s) 6
AfiI CCNNNNNNNGG 5 cut(s) 17, 201, 327, 750, 945
AflIII ACRYGT 1 cut(s) 116
AgsI TTSAA 2 cut(s) 788, 848
AjiI CACGTC 1 cut(s) 119
AjnI CCWGG 2 cut(s) 519, 544
AluBI AGCT 8 cut(s) 355, 396, 495, 772, 1216, 1235, 1358, 1383
AluI AGCT 8 cut(s) 355, 396, 495, 772, 1216, 1235, 1358, 1383
Alw21I GWGCWC 1 cut(s) 398
Alw26I GTCTC 1 cut(s) 302
AlwI GGATC 4 cut(s) 266, 531, 1064, 1199
AlwNI CAGNNNCTG 1 cut(s) 985
AoxI GGCC 2 cut(s) 22, 53
ApaI GGGCCC 1 cut(s) 57
ApeKI GCWGC 8 cut(s) 63, 355, 464, 704, 755, 772, 962, 1275
ApoI RAATTY 4 cut(s) 13, 127, 691, 1238
AseI ATTAAT 1 cut(s) 1373
Asp700I GAANNNNTTC 2 cut(s) 337, 743
AspA2I CCTAGG 1 cut(s) 914
AspLEI GCGC 3 cut(s) 63, 249, 287
AspS9I GGNCC 4 cut(s) 53, 54, 541, 1174
AsuHPI GGTGA 5 cut(s) 217, 253, 263, 398, 560
AsuNHI GCTAGC 1 cut(s) 221
AvaII GGWCC 2 cut(s) 541, 1174
AvrII CCTAGG 1 cut(s) 914
BaeGI GKGCMC 1 cut(s) 57
BalI TGGCCA 1 cut(s) 24
BanI GGYRCC 1 cut(s) 635
BanII GRGCYC 2 cut(s) 57, 398
BarI GAAGNNNNNNTAC 2 cut(s) 790, 822
BauI CACGAG 1 cut(s) 47
Bbv12I GWGCWC 1 cut(s) 398
BbvI GCAGC 8 cut(s) 50, 342, 451, 691, 742, 759, 949, 1262
BccI CCATC 5 cut(s) 33, 248, 383, 494, 1282
BceAI ACGGC 1 cut(s) 25
BciT130I CCWGG 2 cut(s) 521, 546
BclI TGATCA 2 cut(s) 415, 589
BcoDI GTCTC 1 cut(s) 302
BfaI CTAG 6 cut(s) 222, 666, 795, 879, 915, 941
BfmI CTRYAG 3 cut(s) 315, 1122, 1168
BfuAI ACCTGC 1 cut(s) 278
BglI GCCNNNNNGGC 2 cut(s) 244, 282
BglII AGATCT 1 cut(s) 881
BisI GCNGC 8 cut(s) 64, 356, 465, 705, 756, 773, 963, 1276
BlnI CCTAGG 1 cut(s) 914
BlpI GCTNAGC 1 cut(s) 351
BlsI GCNGC 8 cut(s) 65, 357, 466, 706, 757, 774, 964, 1277
Bme1390I CCNGG 2 cut(s) 521, 546
Bme18I GGWCC 2 cut(s) 541, 1174
BmgBI CACGTC 1 cut(s) 119
BmgT120I GGNCC 4 cut(s) 53, 54, 541, 1174
BmiI GGNNCC 7 cut(s) 54, 55, 518, 543, 622, 637, 1175
BmrFI CCNGG 2 cut(s) 521, 546
BmsI GCATC 2 cut(s) 1197, 1282
BmtI GCTAGC 1 cut(s) 225
Bpu10I CCTNAGC 1 cut(s) 359
Bpu1102I GCTNAGC 1 cut(s) 351
BpuEI CTTGAG 1 cut(s) 1253
BsaJI CCNNGG 5 cut(s) 41, 537, 544, 914, 1255
BsaXI ACNNNNNCTCC 2 cut(s) 920, 950
Bsc4I CCNNNNNNNGG 5 cut(s) 17, 201, 327, 750, 945
Bse1I ACTGG 4 cut(s) 586, 950, 1193, 1201
Bse3DI GCAATG 1 cut(s) 216
BseBI CCWGG 2 cut(s) 521, 546
BseDI CCNNGG 5 cut(s) 41, 537, 544, 914, 1255
BseGI GGATG 4 cut(s) 434, 855, 1249, 1297
BseLI CCNNNNNNNGG 5 cut(s) 17, 201, 327, 750, 945
BseMI GCAATG 1 cut(s) 216
BseMII CTCAG 1 cut(s) 342
BseNI ACTGG 4 cut(s) 586, 950, 1193, 1201
BseRI GAGGAG 3 cut(s) 518, 802, 805
BseSI GKGCMC 1 cut(s) 57
BseXI GCAGC 8 cut(s) 50, 342, 451, 691, 742, 759, 949, 1262
BsgI GTGCAG 1 cut(s) 956
Bsh1236I CGCG 2 cut(s) 61, 249
BshFI GGCC 2 cut(s) 24, 55
BshNI GGYRCC 1 cut(s) 635
BsiHKAI GWGCWC 1 cut(s) 398
BslFI GGGAC 5 cut(s) 127, 527, 884, 1187, 1300
BslI CCNNNNNNNGG 5 cut(s) 17, 201, 327, 750, 945
BsmAI GTCTC 1 cut(s) 302
BsmFI GGGAC 5 cut(s) 127, 527, 884, 1187, 1300
BsmI GAATGC 2 cut(s) 904, 1337
BsnI GGCC 2 cut(s) 24, 55
Bsp120I GGGCCC 1 cut(s) 53
Bsp1286I GDGCHC 2 cut(s) 57, 398
Bsp143I GATC 8 cut(s) 258, 415, 523, 589, 881, 1069, 1107, 1191
Bsp1720I GCTNAGC 1 cut(s) 351
Bsp19I CCATGG 1 cut(s) 537
BspACI CCGC 4 cut(s) 236, 249, 274, 322
BspANI GGCC 2 cut(s) 24, 55
BspCNI CTCAG 1 cut(s) 343
BspFNI CGCG 2 cut(s) 61, 249
BspHI TCATGA 2 cut(s) 1377, 1391
BspLI GGNNCC 7 cut(s) 54, 55, 518, 543, 622, 637, 1175
BspMI ACCTGC 1 cut(s) 278
BspOI GCTAGC 1 cut(s) 225
BspPI GGATC 4 cut(s) 266, 531, 1064, 1199
BspQI GCTCTTC 1 cut(s) 459
BspT107I GGYRCC 1 cut(s) 635
BsrDI GCAATG 1 cut(s) 216
BsrI ACTGG 4 cut(s) 586, 950, 1193, 1201
BssECI CCNNGG 5 cut(s) 41, 537, 544, 914, 1255
BssMI GATC 8 cut(s) 258, 415, 523, 589, 881, 1069, 1107, 1191
BssSI CACGAG 1 cut(s) 47
BssT1I CCWWGG 3 cut(s) 537, 914, 1255
Bst2BI CACGAG 1 cut(s) 47
Bst2UI CCWGG 2 cut(s) 521, 546
Bst4CI ACNGT 7 cut(s) 71, 265, 296, 308, 646, 977, 1165
Bst6I CTCTTC 3 cut(s) 459, 793, 1269
BstC8I GCNNGC 2 cut(s) 223, 322
BstDEI CTNAG 3 cut(s) 200, 351, 359
BstDSI CCRYGG 2 cut(s) 41, 537
BstF5I GGATG 4 cut(s) 434, 855, 1249, 1297
BstFNI CGCG 2 cut(s) 61, 249
BstHHI GCGC 3 cut(s) 63, 249, 287
BstKTI GATC 8 cut(s) 261, 418, 526, 592, 884, 1072, 1110, 1194
BstMAI GTCTC 1 cut(s) 302
BstMBI GATC 8 cut(s) 258, 415, 523, 589, 881, 1069, 1107, 1191
BstMWI GCNNNNNNNGC 4 cut(s) 52, 244, 282, 831
BstNI CCWGG 2 cut(s) 521, 546
BstSCI CCNGG 2 cut(s) 519, 544
BstSFI CTRYAG 3 cut(s) 315, 1122, 1168
BstSLI GKGCMC 1 cut(s) 57
BstUI CGCG 2 cut(s) 61, 249
BstV1I GCAGC 8 cut(s) 50, 342, 451, 691, 742, 759, 949, 1262
BstX2I RGATCY 2 cut(s) 523, 881
BstYI RGATCY 2 cut(s) 523, 881
BsuRI GGCC 2 cut(s) 24, 55
BtgI CCRYGG 2 cut(s) 41, 537
BtrI CACGTC 1 cut(s) 119
BtsCI GGATG 4 cut(s) 434, 855, 1249, 1297
BtsIMutI CAGTG 4 cut(s) 67, 973, 983, 1194
BveI ACCTGC 1 cut(s) 278
Cac8I GCNNGC 2 cut(s) 223, 322
CaiI CAGNNNCTG 1 cut(s) 985
CciI TCATGA 2 cut(s) 1377, 1391
CfoI GCGC 3 cut(s) 63, 249, 287
Cfr13I GGNCC 4 cut(s) 53, 54, 541, 1174
Csp6I GTAC 1 cut(s) 5
CviAII CATG 7 cut(s) 122, 344, 538, 1084, 1178, 1378, 1392
CviQI GTAC 1 cut(s) 5
DdeI CTNAG 3 cut(s) 200, 351, 359
DpnI GATC 8 cut(s) 260, 417, 525, 591, 883, 1071, 1109, 1193
DpnII GATC 8 cut(s) 258, 415, 523, 589, 881, 1069, 1107, 1191
EaeI YGGCCR 1 cut(s) 22
Eam1104I CTCTTC 3 cut(s) 459, 793, 1269
EarI CTCTTC 3 cut(s) 459, 793, 1269
EciI GGCGGA 2 cut(s) 225, 263
Ecl136II GAGCTC 1 cut(s) 396
Eco130I CCWWGG 3 cut(s) 537, 914, 1255
Eco24I GRGCYC 2 cut(s) 57, 398
Eco47I GGWCC 2 cut(s) 541, 1174
Eco53kI GAGCTC 1 cut(s) 396
Eco57I CTGAAG 2 cut(s) 1232, 1309
EcoICRI GAGCTC 1 cut(s) 396
EcoO109I RGGNCCY 1 cut(s) 53
EcoRI GAATTC 2 cut(s) 127, 1238
EcoRII CCWGG 2 cut(s) 519, 544
EcoT14I CCWWGG 3 cut(s) 537, 914, 1255
EcoT38I GRGCYC 2 cut(s) 57, 398
ErhI CCWWGG 3 cut(s) 537, 914, 1255
FaeI CATG 7 cut(s) 125, 347, 541, 1087, 1181, 1381, 1395
FaqI GGGAC 5 cut(s) 127, 527, 884, 1187, 1300
FatI CATG 7 cut(s) 121, 343, 537, 1083, 1177, 1377, 1391
FauI CCCGC 1 cut(s) 329
FbaI TGATCA 2 cut(s) 415, 589
FblI GTMKAC 1 cut(s) 1167
Fnu4HI GCNGC 8 cut(s) 64, 356, 465, 705, 756, 773, 963, 1276
FokI GGATG 4 cut(s) 421, 842, 1236, 1304
FriOI GRGCYC 2 cut(s) 57, 398
Fsp4HI GCNGC 8 cut(s) 64, 356, 465, 705, 756, 773, 963, 1276
FspBI CTAG 6 cut(s) 222, 666, 795, 879, 915, 941
GlaI GCGC 3 cut(s) 62, 248, 286
GluI GCNGC 8 cut(s) 64, 356, 465, 705, 756, 773, 963, 1276
HaeIII GGCC 2 cut(s) 24, 55
HhaI GCGC 3 cut(s) 63, 249, 287
Hin1II CATG 7 cut(s) 125, 347, 541, 1087, 1181, 1381, 1395
Hin6I GCGC 3 cut(s) 61, 247, 285
HinP1I GCGC 3 cut(s) 61, 247, 285
HindIII AAGCTT 1 cut(s) 1214
HinfI GANTC 3 cut(s) 605, 988, 1349
HphI GGTGA 5 cut(s) 217, 253, 263, 398, 560
Hpy166II GTNNAC 2 cut(s) 1168, 1309
Hpy188I TCNGA 5 cut(s) 30, 183, 981, 993, 1328
Hpy188III TCNNGA 5 cut(s) 1097, 1111, 1204, 1378, 1392
Hpy8I GTNNAC 2 cut(s) 1168, 1309
HpyAV CCTTC 4 cut(s) 649, 754, 943, 1256
HpyCH4III ACNGT 7 cut(s) 71, 265, 296, 308, 646, 977, 1165
HpyCH4IV ACGT 1 cut(s) 118
HpyCH4V TGCA 6 cut(s) 482, 834, 973, 1011, 1228, 1335
HpyF10VI GCNNNNNNNGC 4 cut(s) 52, 244, 282, 831
HpyF3I CTNAG 3 cut(s) 200, 351, 359
HpySE526I ACGT 1 cut(s) 118
Hsp92II CATG 7 cut(s) 125, 347, 541, 1087, 1181, 1381, 1395
HspAI GCGC 3 cut(s) 61, 247, 285
Ksp22I TGATCA 2 cut(s) 415, 589
Kzo9I GATC 8 cut(s) 258, 415, 523, 589, 881, 1069, 1107, 1191
LguI GCTCTTC 1 cut(s) 459
LmnI GCTCC 2 cut(s) 393, 620
Lsp1109I GCAGC 8 cut(s) 50, 342, 451, 691, 742, 759, 949, 1262
LweI GCATC 2 cut(s) 1197, 1282
MaeI CTAG 6 cut(s) 222, 666, 795, 879, 915, 941
MaeII ACGT 1 cut(s) 118
MaeIII GTNAC 4 cut(s) 205, 290, 302, 1184
MalI GATC 8 cut(s) 260, 417, 525, 591, 883, 1071, 1109, 1193
MboI GATC 8 cut(s) 258, 415, 523, 589, 881, 1069, 1107, 1191
MboII GAAGA 4 cut(s) 446, 810, 1256, 1315
MflI RGATCY 2 cut(s) 523, 881
MhlI GDGCHC 2 cut(s) 57, 398
MlsI TGGCCA 1 cut(s) 24
MluCI AATT 9 cut(s) 13, 127, 310, 564, 661, 691, 1148, 1238, 1370
MluNI TGGCCA 1 cut(s) 24
MlyI GAGTC 1 cut(s) 1343
MmeI TCCRAC 2 cut(s) 705, 935
Mox20I TGGCCA 1 cut(s) 24
MroXI GAANNNNTTC 2 cut(s) 337, 743
MscI TGGCCA 1 cut(s) 24
MseI TTAA 7 cut(s) 402, 471, 909, 927, 1002, 1151, 1373
Msp20I TGGCCA 1 cut(s) 24
MspR9I CCNGG 2 cut(s) 521, 546
Mva1269I GAATGC 2 cut(s) 904, 1337
MvaI CCWGG 2 cut(s) 521, 546
MvnI CGCG 2 cut(s) 61, 249
MwoI GCNNNNNNNGC 4 cut(s) 52, 244, 282, 831
NcoI CCATGG 1 cut(s) 537
NdeII GATC 8 cut(s) 258, 415, 523, 589, 881, 1069, 1107, 1191
NheI GCTAGC 1 cut(s) 221
NlaIII CATG 7 cut(s) 125, 347, 541, 1087, 1181, 1381, 1395
NlaIV GGNNCC 7 cut(s) 54, 55, 518, 543, 622, 637, 1175
NmuCI GTSAC 2 cut(s) 205, 302
PagI TCATGA 2 cut(s) 1377, 1391
PciSI GCTCTTC 1 cut(s) 459
PctI GAATGC 2 cut(s) 904, 1337
PdmI GAANNNNTTC 2 cut(s) 337, 743
PfeI GAWTC 2 cut(s) 605, 988
PflMI CCANNNNNTGG 1 cut(s) 17
PkrI GCNGC 8 cut(s) 65, 357, 466, 706, 757, 774, 964, 1277
PleI GAGTC 1 cut(s) 1343
PpsI GAGTC 1 cut(s) 1343
PshBI ATTAAT 1 cut(s) 1373
Psp124BI GAGCTC 1 cut(s) 398
Psp6I CCWGG 2 cut(s) 519, 544
PspGI CCWGG 2 cut(s) 519, 544
PspN4I GGNNCC 7 cut(s) 54, 55, 518, 543, 622, 637, 1175
PspOMI GGGCCC 1 cut(s) 53
PspPI GGNCC 4 cut(s) 53, 54, 541, 1174
PstNI CAGNNNCTG 1 cut(s) 985
PsuI RGATCY 2 cut(s) 523, 881
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
SacI GAGCTC 1 cut(s) 398
SapI GCTCTTC 1 cut(s) 459
SaqAI TTAA 7 cut(s) 402, 471, 909, 927, 1002, 1151, 1373
SatI GCNGC 8 cut(s) 64, 356, 465, 705, 756, 773, 963, 1276
Sau3AI GATC 8 cut(s) 258, 415, 523, 589, 881, 1069, 1107, 1191
Sau96I GGNCC 4 cut(s) 53, 54, 541, 1174
SchI GAGTC 1 cut(s) 1343
ScrFI CCNGG 2 cut(s) 521, 546
SduI GDGCHC 2 cut(s) 57, 398
SfaNI GCATC 2 cut(s) 1197, 1282
SfcI CTRYAG 3 cut(s) 315, 1122, 1168
SinI GGWCC 2 cut(s) 541, 1174
SmlI CTYRAG 1 cut(s) 1268
SmoI CTYRAG 1 cut(s) 1268
Sse9I AATT 9 cut(s) 13, 127, 310, 564, 661, 691, 1148, 1238, 1370
SsiI CCGC 4 cut(s) 236, 249, 274, 322
SspI AATATT 1 cut(s) 1000
SspMI CTAG 6 cut(s) 222, 666, 795, 879, 915, 941
SstI GAGCTC 1 cut(s) 398
StyD4I CCNGG 2 cut(s) 519, 544
StyI CCWWGG 3 cut(s) 537, 914, 1255
TaaI ACNGT 7 cut(s) 71, 265, 296, 308, 646, 977, 1165
TaiI ACGT 1 cut(s) 121
TasI AATT 9 cut(s) 13, 127, 310, 564, 661, 691, 1148, 1238, 1370
TfiI GAWTC 2 cut(s) 605, 988
Tru1I TTAA 7 cut(s) 402, 471, 909, 927, 1002, 1151, 1373
Tru9I TTAA 7 cut(s) 402, 471, 909, 927, 1002, 1151, 1373
TscAI CASTG 4 cut(s) 74, 980, 990, 1201
TseFI GTSAC 2 cut(s) 205, 302
TseI GCWGC 8 cut(s) 63, 355, 464, 704, 755, 772, 962, 1275
Tsp45I GTSAC 2 cut(s) 205, 302
TspDTI ATGAA 2 cut(s) 1009, 1238
TspRI CASTG 4 cut(s) 74, 980, 990, 1201
Van91I CCANNNNNTGG 1 cut(s) 17
VpaK11BI GGWCC 2 cut(s) 541, 1174
VspI ATTAAT 1 cut(s) 1373
XapI RAATTY 4 cut(s) 13, 127, 691, 1238
XmaJI CCTAGG 1 cut(s) 914
XmiI GTMKAC 1 cut(s) 1167
XmnI GAANNNNTTC 2 cut(s) 337, 743
XspI CTAG 6 cut(s) 222, 666, 795, 879, 915, 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.