Rorug04G0019500

Ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000254
Physical Location & Seq
Reverse (-)
2905925 .. 2907289
1365 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0019500.1

Sequence Viewer

Length: 1365 bp
ATGGCACAATTGAGCGTTTCATCAGCAGAGAGCGTAGCGAATATTGAAGAGCTTCTTAGTCAGATTCTTGTATGGGTTCCAGCTCTATCGCTGATCCGTTTCAAGTGCGTCTCCAAGCACTGGCTCGCTCTCATCTCCGACCCTGAGTTCCGTCGCCGTCACACCCTCCGAAACCCTAACTCCAAAATCTCAGCTTTCTTCTCTCCCCAAACCAATGAAGAAACCTTCAAGTCCATCCGTCTTGGTAACCATGAAATCCCACCTAGGTGCAATCCCTTCAAAACCCTCAACAATTCCGTTTCTGATGAATCAGAGTTGAGGATTCTTCAGTCCTGCAATGGCCTCTTTCTCTGCCATATTCCTATATTTGGAGAACATCATCCCGTATATGTTGTCAATCCCACAACCAACCAATTCCGGGCTCTTTCTTCTCCAACTGTCAAAGAAGACATGGACATAATGGCTTTTGTACGCTACGCTTTGGCTTTTGATCCTTCCACATCGCCTCATTACAAGGTGGTCTGCGTGAATAACTTCCCCCATTATTATAAAAGGGGGCAGCACAAAATAGACATGTATTCATCTGAGACCGGAAAGTGGAAGCGTCTTGAGGTTCCTTTCTTCCCAAGCCCCTCTGACGTGGGCAGACACCATGATTCCATGAAGCAGGCCATGCACTTTGACTCCAGGAGTAGGGAAGGCGCCGTATACTGCAACGGCGCAGTTCATTGGACAAGAGACAGAGGGGTAGAAAGCTTGCCATTCTGCTGGTTCCCAGATGACAGGGTTGGATTCACAAGAGAGGAAACTGATGTGCTGCACTACTTCGACATAGGCCAAGAGCGTTTGCTGGTCGCTCCAGCCACCCCTCCTGTCCCCTTGGTTGTCAAGAACATTCCACTGAAGGTTAGTGGTTTTGGCTGCAAGACTCCCACTGAGTGGCCGTCACTGACTAAGAGATATTTTGGGGAGTGCGGTGGCTGTTTGTACTTGATTGAGACTTATAAGCATTGTAACACTCAATTTGACGTCATGGAGATGGAGAGGGACTACTCTGGCTGGCTTGTCAAGTATCATGTTGATCTTAATCCTCTGGTCGCAGCTCTTAATCCTGGACAAGATTGGAATGGTTTTGAAGTCTTGTGCCTTTCTCAAGAGGAGGAAACAGATAACGGGGTTGAGGATTCTTCAGCTGATCTTTTATTGCACATGCCTGGTAAGGTCATATCTTATAATATTTGGAATAAGAGCTTCAAGACATCTGTTGAGTTGGCCAATAAGGAACTTTTTCTAGCTTCACGTCATAATCATCGTACTCGAGAGGATGTTATTTTTCCTTACATGGAGACTCTAGCTTGTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

454

Amino Acids

52.05

Weight (kDa)

6.26

Isoelectric Point (pI)

61.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 16 - 52 4.1e-06 F-box domain
FBA_3 PF08268 62 - 211 2.5e-06 F-box associated beta propeller domain
FBA_1 PF07734 84 - 221 1.2e-10 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000254)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g25671 FvH4_1g29782 FvH4_2g06731 FvH4_2g09413 FvH4_2g12061 FvH4_2g12671 FvH4_2g14202 FvH4_3g27901 FvH4_3g30492 FvH4_3g36953 FvH4_4g10141 FvH4_4g11162 FvH4_5g27995 FvH4_5g34262 FvH4_6g10681 FvH4_6g13733 FvH4_6g18164 FvH4_6g25491 FvH4_6g25791 FvH4_6g27023 FvH4_6g34321 FvH4_7g05070
pyrus_communis pycom04g06850
rosa_chinensis RchiOBHm_Chr1g0322281 RchiOBHm_Chr1g0334981 RchiOBHm_Chr1g0371181 RchiOBHm_Chr2g0125461 RchiOBHm_Chr2g0127141 RchiOBHm_Chr2g0128961 RchiOBHm_Chr2g0132921 RchiOBHm_Chr3g0486471 RchiOBHm_Chr3g0492911 RchiOBHm_Chr4g0412131 RchiOBHm_Chr4g0426941 RchiOBHm_Chr4g0437331 RchiOBHm_Chr5g0018821 RchiOBHm_Chr5g0040021 RchiOBHm_Chr5g0051041 RchiOBHm_Chr6g0266871 RchiOBHm_Chr6g0271761 RchiOBHm_Chr7g0200931 RchiOBHm_Chr7g0220091
rosa_multiflora Rmu_co7991344.1_g000001 Rmu_sc0000172.1_g000008 Rmu_sc0000194.1_g000010 Rmu_sc0000446.1_g000026 Rmu_sc0000496.1_g000011 Rmu_sc0000530.1_g000013 Rmu_sc0000706.1_g000044 Rmu_sc0000745.1_g000029 Rmu_sc0001301.1_g000027 Rmu_sc0001520.1_g000008 Rmu_sc0001966.1_g000025 Rmu_sc0001989.1_g000007 Rmu_sc0002239.1_g000002 Rmu_sc0002816.1_g000004 Rmu_sc0003458.1_g000001 Rmu_sc0003825.1_g000031 Rmu_sc0003919.1_g000002 Rmu_sc0004053.1_g000007 Rmu_sc0004161.1_g000008 Rmu_sc0004368.1_g000033 Rmu_sc0004383.1_g000002 Rmu_sc0004923.1_g000002 Rmu_sc0005065.1_g000001 Rmu_sc0005478.1_g000001 Rmu_sc0006847.1_g000031 Rmu_sc0009556.1_g000002 Rmu_sc0010783.1_g000007 Rmu_sc0011424.1_g000022 Rmu_sc0013205.1_g000002 Rmu_sc0017407.1_g000001 Rmu_sc0023757.1_g000002 Rmu_sc0032346.1_g000001 Rmu_ssc0000008.1_g000014 Rmu_ssc0000158.1_g000033 Rmu_ssc0000217.1_g000028
rosa_roxburghii Rroxscaffold_1G00000480 Rroxscaffold_1G00026050 Rroxscaffold_1G00026250 Rroxscaffold_2G00085120 Rroxscaffold_2G00119710 Rroxscaffold_2G00126610 Rroxscaffold_2G00129340 Rroxscaffold_3G00245550 Rroxscaffold_5G00340210 Rroxscaffold_5G00340330 Rroxscaffold_6G00397180 Rroxscaffold_7G00216160
rosa_rugosa Rorug01G0040000 Rorug01G0067400 Rorug01G0092300 Rorug01G0197000 Rorug01G0474200 Rorug01G0482500 Rorug01G0489300 Rorug02G0142900 Rorug02G0259000 Rorug02G0283200 Rorug02G0341400 Rorug02G0341600 Rorug02G0370900 Rorug02G0379700 Rorug02G0386100 Rorug02G0387300 Rorug03G0112600 Rorug03G0265600 Rorug03G0298800 Rorug04G0019500 Rorug05G0069900 Rorug05G0070500 Rorug05G0256800 Rorug05G0287300 Rorug05G0592000 Rorug06G0057800 Rorug06G0082000 Rorug06G0118900 Rorug06G0176500 Rorug06G0423100 Rorug07G0050100 Rorug07G0095100 Rorug07G0202100 Rorug07G0216600 Rorug07G0244300 Rorug07G0245500
rosa_samantha Rh1DG154800 Rh2CG613000 Rh6BG016600 Rh6BG475100 Rh6CG013200 Rh7AG443800
rosa_wichuraiana Rw0G021840 Rw4G023650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 549, 1005, 1233
AatII GACGTC 1 cut(s) 1032
AccB1I GGYRCC 1 cut(s) 701
AccB7I CCANNNNNTGG 2 cut(s) 120, 939
AccI GTMKAC 1 cut(s) 708
AciI CCGC 1 cut(s) 975
AclWI GGATC 2 cut(s) 88, 485
AcoI YGGCCR 2 cut(s) 941, 1272
AcuI CTGAAG 3 cut(s) 311, 923, 1173
AcyI GRCGYC 2 cut(s) 702, 1029
AdeI CACNNNGTG 1 cut(s) 939
AfaI GTAC 3 cut(s) 471, 989, 1315
AfiI CCNNNNNNNGG 6 cut(s) 120, 368, 418, 597, 693, 939
AflIII ACRYGT 1 cut(s) 573
AgsI TTSAA 6 cut(s) 47, 103, 229, 280, 1136, 1255
AjiI CACGTC 2 cut(s) 640, 1301
AjnI CCWGG 3 cut(s) 686, 1111, 1213
AleI CACNNNNGTG 1 cut(s) 265
AluBI AGCT 9 cut(s) 52, 83, 194, 756, 1103, 1193, 1251, 1295, 1355
AluI AGCT 9 cut(s) 52, 83, 194, 756, 1103, 1193, 1251, 1295, 1355
Alw26I GTCTC 5 cut(s) 115, 581, 732, 992, 1340
AlwI GGATC 2 cut(s) 88, 485
Ama87I CYCGRG 1 cut(s) 1317
AoxI GGCC 5 cut(s) 340, 669, 835, 941, 1272
ApeKI GCWGC 4 cut(s) 559, 817, 921, 1100
Asp700I GAANNNNTTC 3 cut(s) 51, 533, 1287
AspA2I CCTAGG 1 cut(s) 263
AspLEI GCGC 2 cut(s) 704, 722
AsuC2I CCSGG 1 cut(s) 419
AvaI CYCGRG 1 cut(s) 1317
AvrII CCTAGG 1 cut(s) 263
BalI TGGCCA 1 cut(s) 1274
BanI GGYRCC 1 cut(s) 701
BanII GRGCYC 1 cut(s) 424
BbsI GAAGAC 1 cut(s) 453
BbvI GCAGC 4 cut(s) 571, 804, 908, 1112
BccI CCATC 2 cut(s) 242, 1033
BceAI ACGGC 4 cut(s) 141, 689, 733, 928
BciT130I CCWGG 3 cut(s) 688, 1113, 1215
BcnI CCSGG 1 cut(s) 419
BcoDI GTCTC 5 cut(s) 115, 581, 732, 992, 1340
BfaI CTAG 3 cut(s) 264, 1292, 1352
BfoI RGCGCY 1 cut(s) 705
BisI GCNGC 4 cut(s) 560, 818, 922, 1101
BlnI CCTAGG 1 cut(s) 263
BlsI GCNGC 4 cut(s) 561, 819, 923, 1102
Bme1390I CCNGG 4 cut(s) 419, 688, 1113, 1215
BmeT110I CYCGRG 1 cut(s) 1317
BmgBI CACGTC 2 cut(s) 640, 1301
BmiI GGNNCC 4 cut(s) 78, 615, 703, 773
BmrFI CCNGG 4 cut(s) 419, 688, 1113, 1215
BpiI GAAGAC 1 cut(s) 453
BpmI CTGGAG 2 cut(s) 670, 843
BpuEI CTTGAG 2 cut(s) 629, 1137
BpuMI CCSGG 1 cut(s) 419
BsaBI GATNNNNATC 1 cut(s) 1086
BsaHI GRCGYC 2 cut(s) 702, 1029
BsaI GGTCTC 1 cut(s) 581
BsaJI CCNNGG 2 cut(s) 263, 879
BsaWI WCCGGW 1 cut(s) 590
BsaXI ACNNNNNCTCC 4 cut(s) 164, 194, 668, 698
Bsc4I CCNNNNNNNGG 6 cut(s) 120, 368, 418, 597, 693, 939
Bse1I ACTGG 1 cut(s) 125
Bse3DI GCAATG 1 cut(s) 343
Bse8I GATNNNNATC 1 cut(s) 1086
BseBI CCWGG 3 cut(s) 688, 1113, 1215
BseDI CCNNGG 2 cut(s) 263, 879
BseGI GGATG 3 cut(s) 234, 379, 1330
BseJI GATNNNNATC 1 cut(s) 1086
BseLI CCNNNNNNNGG 6 cut(s) 120, 368, 418, 597, 693, 939
BseMI GCAATG 1 cut(s) 343
BseMII CTCAG 4 cut(s) 135, 204, 576, 927
BseNI ACTGG 1 cut(s) 125
BseRI GAGGAG 1 cut(s) 1172
BseXI GCAGC 4 cut(s) 571, 804, 908, 1112
BsgI GTGCAG 1 cut(s) 803
BshFI GGCC 5 cut(s) 342, 671, 837, 943, 1274
BshNI GGYRCC 1 cut(s) 701
BsiHKCI CYCGRG 1 cut(s) 1317
BsiSI CCGG 2 cut(s) 418, 591
BslFI GGGAC 2 cut(s) 860, 1061
BslI CCNNNNNNNGG 6 cut(s) 120, 368, 418, 597, 693, 939
BsmAI GTCTC 5 cut(s) 115, 581, 732, 992, 1340
BsmBI CGTCTC 1 cut(s) 115
BsmFI GGGAC 2 cut(s) 860, 1061
BsnI GGCC 5 cut(s) 342, 671, 837, 943, 1274
Bso31I GGTCTC 1 cut(s) 581
BsoBI CYCGRG 1 cut(s) 1317
Bsp1286I GDGCHC 1 cut(s) 424
Bsp143I GATC 4 cut(s) 93, 490, 1081, 1195
BspACI CCGC 1 cut(s) 975
BspANI GGCC 5 cut(s) 342, 671, 837, 943, 1274
BspCNI CTCAG 4 cut(s) 136, 203, 577, 928
BspLI GGNNCC 4 cut(s) 78, 615, 703, 773
BspPI GGATC 2 cut(s) 88, 485
BspQI GCTCTTC 1 cut(s) 42
BspT107I GGYRCC 1 cut(s) 701
BspTNI GGTCTC 1 cut(s) 581
BsrDI GCAATG 1 cut(s) 343
BsrI ACTGG 1 cut(s) 125
BssECI CCNNGG 2 cut(s) 263, 879
BssMI GATC 4 cut(s) 93, 490, 1081, 1195
BssNAI GTATAC 1 cut(s) 709
BssNI GRCGYC 2 cut(s) 702, 1029
BssT1I CCWWGG 2 cut(s) 263, 879
Bst1107I GTATAC 1 cut(s) 709
Bst2UI CCWGG 3 cut(s) 688, 1113, 1215
Bst4CI ACNGT 1 cut(s) 439
Bst6I CTCTTC 1 cut(s) 42
BstACI GRCGYC 2 cut(s) 702, 1029
BstAPI GCANNNNNTGC 1 cut(s) 673
BstC8I GCNNGC 4 cut(s) 126, 669, 758, 1061
BstDEI CTNAG 6 cut(s) 56, 144, 190, 585, 936, 954
BstEII GGTNACC 1 cut(s) 245
BstF5I GGATG 3 cut(s) 234, 379, 1330
BstH2I RGCGCY 1 cut(s) 705
BstHHI GCGC 2 cut(s) 704, 722
BstKTI GATC 4 cut(s) 96, 493, 1084, 1198
BstMAI GTCTC 5 cut(s) 115, 581, 732, 992, 1340
BstMBI GATC 4 cut(s) 93, 490, 1081, 1195
BstMWI GCNNNNNNNGC 1 cut(s) 673
BstNI CCWGG 3 cut(s) 688, 1113, 1215
BstNSI RCATGY 2 cut(s) 577, 1213
BstPI GGTNACC 1 cut(s) 245
BstSCI CCNGG 4 cut(s) 417, 686, 1111, 1213
BstV1I GCAGC 4 cut(s) 571, 804, 908, 1112
BstV2I GAAGAC 1 cut(s) 453
BstXI CCANNNNNNTGG 1 cut(s) 768
BstZ17I GTATAC 1 cut(s) 709
BsuRI GGCC 5 cut(s) 342, 671, 837, 943, 1274
BtgZI GCGATG 1 cut(s) 486
BtrI CACGTC 2 cut(s) 640, 1301
BtsCI GGATG 3 cut(s) 234, 379, 1330
BtsIMutI CAGTG 4 cut(s) 118, 899, 933, 947
Cac8I GCNNGC 4 cut(s) 126, 669, 758, 1061
CfoI GCGC 2 cut(s) 704, 722
CseI GACGC 2 cut(s) 97, 593
Csp6I GTAC 3 cut(s) 470, 988, 1314
CviQI GTAC 3 cut(s) 470, 988, 1314
DdeI CTNAG 6 cut(s) 56, 144, 190, 585, 936, 954
DinI GGCGCC 1 cut(s) 703
DpnI GATC 4 cut(s) 95, 492, 1083, 1197
DpnII GATC 4 cut(s) 93, 490, 1081, 1195
DraIII CACNNNGTG 1 cut(s) 939
EaeI YGGCCR 2 cut(s) 941, 1272
Eam1104I CTCTTC 1 cut(s) 42
EarI CTCTTC 1 cut(s) 42
Eco130I CCWWGG 2 cut(s) 263, 879
Eco24I GRGCYC 1 cut(s) 424
Eco31I GGTCTC 1 cut(s) 581
Eco57I CTGAAG 3 cut(s) 311, 923, 1173
Eco88I CYCGRG 1 cut(s) 1317
Eco91I GGTNACC 1 cut(s) 245
EcoO65I GGTNACC 1 cut(s) 245
EcoRII CCWGG 3 cut(s) 686, 1111, 1213
EcoT14I CCWWGG 2 cut(s) 263, 879
EcoT38I GRGCYC 1 cut(s) 424
EgeI GGCGCC 1 cut(s) 703
EheI GGCGCC 1 cut(s) 703
ErhI CCWWGG 2 cut(s) 263, 879
Esp3I CGTCTC 1 cut(s) 115
FalI AAGNNNNNCTT 2 cut(s) 39, 71
FaqI GGGAC 2 cut(s) 860, 1061
FblI GTMKAC 1 cut(s) 708
Fnu4HI GCNGC 4 cut(s) 560, 818, 922, 1101
FokI GGATG 3 cut(s) 221, 366, 1337
FriOI GRGCYC 1 cut(s) 424
Fsp4HI GCNGC 4 cut(s) 560, 818, 922, 1101
FspBI CTAG 3 cut(s) 264, 1292, 1352
GlaI GCGC 2 cut(s) 703, 721
GluI GCNGC 4 cut(s) 560, 818, 922, 1101
GsuI CTGGAG 2 cut(s) 670, 843
HaeII RGCGCY 1 cut(s) 705
HaeIII GGCC 5 cut(s) 342, 671, 837, 943, 1274
HapII CCGG 2 cut(s) 418, 591
HgaI GACGC 2 cut(s) 97, 593
HhaI GCGC 2 cut(s) 704, 722
Hin1I GRCGYC 2 cut(s) 702, 1029
Hin6I GCGC 2 cut(s) 702, 720
HinP1I GCGC 2 cut(s) 702, 720
HindIII AAGCTT 1 cut(s) 754
HinfI GANTC 9 cut(s) 64, 308, 322, 656, 683, 792, 928, 1184, 1348
HpaII CCGG 2 cut(s) 418, 591
Hpy166II GTNNAC 1 cut(s) 709
Hpy188I TCNGA 7 cut(s) 63, 139, 170, 304, 313, 586, 637
Hpy188III TCNNGA 5 cut(s) 608, 889, 1154, 1255, 1319
Hpy8I GTNNAC 1 cut(s) 709
Hpy99I CGWCG 1 cut(s) 156
HpyAV CCTTC 5 cut(s) 235, 286, 504, 692, 898
HpyCH4III ACNGT 1 cut(s) 439
HpyCH4IV ACGT 3 cut(s) 639, 1029, 1300
HpyCH4V TGCA 7 cut(s) 270, 336, 676, 714, 820, 924, 1207
HpyF10VI GCNNNNNNNGC 1 cut(s) 673
HpyF3I CTNAG 6 cut(s) 56, 144, 190, 585, 936, 954
HpySE526I ACGT 3 cut(s) 639, 1029, 1300
Hsp92I GRCGYC 2 cut(s) 702, 1029
HspAI GCGC 2 cut(s) 702, 720
KasI GGCGCC 1 cut(s) 701
Kzo9I GATC 4 cut(s) 93, 490, 1081, 1195
LguI GCTCTTC 1 cut(s) 42
LmnI GCTCC 1 cut(s) 862
Lsp1109I GCAGC 4 cut(s) 571, 804, 908, 1112
MaeI CTAG 3 cut(s) 264, 1292, 1352
MaeII ACGT 3 cut(s) 639, 1029, 1300
MaeIII GTNAC 4 cut(s) 158, 245, 945, 1013
MalI GATC 4 cut(s) 95, 492, 1083, 1197
MboI GATC 4 cut(s) 93, 490, 1081, 1195
MboII GAAGA 8 cut(s) 59, 190, 230, 317, 420, 458, 613, 1179
MfeI CAATTG 1 cut(s) 8
MhlI GDGCHC 1 cut(s) 424
MlsI TGGCCA 1 cut(s) 1274
MluCI AATT 4 cut(s) 8, 292, 413, 1022
MluNI TGGCCA 1 cut(s) 1274
Mly113I GGCGCC 1 cut(s) 702
MlyI GAGTC 3 cut(s) 677, 922, 1342
MmeI TCCRAC 3 cut(s) 162, 458, 769
Mox20I TGGCCA 1 cut(s) 1274
MroXI GAANNNNTTC 3 cut(s) 51, 533, 1287
MscI TGGCCA 1 cut(s) 1274
MseI TTAA 2 cut(s) 1086, 1107
MslI CAYNNNNRTG 2 cut(s) 265, 1037
Msp20I TGGCCA 1 cut(s) 1274
MspA1I CMGCKG 1 cut(s) 1193
MspI CCGG 2 cut(s) 418, 591
MspR9I CCNGG 4 cut(s) 419, 688, 1113, 1215
MunI CAATTG 1 cut(s) 8
MvaI CCWGG 3 cut(s) 688, 1113, 1215
MwoI GCNNNNNNNGC 1 cut(s) 673
NarI GGCGCC 1 cut(s) 702
NciI CCSGG 1 cut(s) 419
NdeII GATC 4 cut(s) 93, 490, 1081, 1195
NlaIV GGNNCC 4 cut(s) 78, 615, 703, 773
NmuCI GTSAC 2 cut(s) 158, 945
NspI RCATGY 2 cut(s) 577, 1213
OliI CACNNNNGTG 1 cut(s) 265
PaeR7I CTCGAG 1 cut(s) 1317
PciI ACATGT 1 cut(s) 573
PciSI GCTCTTC 1 cut(s) 42
PdmI GAANNNNTTC 3 cut(s) 51, 533, 1287
PfeI GAWTC 6 cut(s) 64, 308, 322, 656, 792, 1184
PflMI CCANNNNNTGG 2 cut(s) 120, 939
PfoI TCCNGGA 2 cut(s) 686, 1111
PkrI GCNGC 4 cut(s) 561, 819, 923, 1102
PleI GAGTC 3 cut(s) 677, 922, 1342
PluTI GGCGCC 1 cut(s) 705
PpsI GAGTC 3 cut(s) 677, 922, 1342
PscI ACATGT 1 cut(s) 573
PsiI TTATAA 3 cut(s) 549, 1005, 1233
Psp6I CCWGG 3 cut(s) 686, 1111, 1213
PspEI GGTNACC 1 cut(s) 245
PspGI CCWGG 3 cut(s) 686, 1111, 1213
PspN4I GGNNCC 4 cut(s) 78, 615, 703, 773
PvuII CAGCTG 1 cut(s) 1193
RsaI GTAC 3 cut(s) 471, 989, 1315
RsaNI GTAC 3 cut(s) 470, 988, 1314
RseI CAYNNNNRTG 2 cut(s) 265, 1037
SapI GCTCTTC 1 cut(s) 42
SaqAI TTAA 2 cut(s) 1086, 1107
SatI GCNGC 4 cut(s) 560, 818, 922, 1101
Sau3AI GATC 4 cut(s) 93, 490, 1081, 1195
SchI GAGTC 3 cut(s) 677, 922, 1342
ScrFI CCNGG 4 cut(s) 419, 688, 1113, 1215
SduI GDGCHC 1 cut(s) 424
SfoI GGCGCC 1 cut(s) 703
Sfr274I CTCGAG 1 cut(s) 1317
SlaI CTCGAG 1 cut(s) 1317
SmiMI CAYNNNNRTG 2 cut(s) 265, 1037
SmlI CTYRAG 3 cut(s) 608, 1152, 1317
SmoI CTYRAG 3 cut(s) 608, 1152, 1317
Sse9I AATT 4 cut(s) 8, 292, 413, 1022
SsiI CCGC 1 cut(s) 975
SspDI GGCGCC 1 cut(s) 701
SspI AATATT 2 cut(s) 43, 1237
SspMI CTAG 3 cut(s) 264, 1292, 1352
StyD4I CCNGG 4 cut(s) 417, 686, 1111, 1213
StyI CCWWGG 2 cut(s) 263, 879
TaaI ACNGT 1 cut(s) 439
TaiI ACGT 3 cut(s) 642, 1032, 1303
TaqI TCGA 2 cut(s) 828, 1318
TasI AATT 4 cut(s) 8, 292, 413, 1022
TatI WGTACW 1 cut(s) 987
TfiI GAWTC 6 cut(s) 64, 308, 322, 656, 792, 1184
Tru1I TTAA 2 cut(s) 1086, 1107
Tru9I TTAA 2 cut(s) 1086, 1107
TscAI CASTG 4 cut(s) 125, 906, 940, 954
TseFI GTSAC 2 cut(s) 158, 945
TseI GCWGC 4 cut(s) 559, 817, 921, 1100
Tsp45I GTSAC 2 cut(s) 158, 945
TspDTI ATGAA 7 cut(s) 9, 231, 267, 321, 570, 677, 716
TspGWI ACGGA 4 cut(s) 86, 140, 227, 286
TspRI CASTG 4 cut(s) 125, 906, 940, 954
Van91I CCANNNNNTGG 2 cut(s) 120, 939
XceI RCATGY 2 cut(s) 577, 1213
XhoI CTCGAG 1 cut(s) 1317
XmaJI CCTAGG 1 cut(s) 263
XmiI GTMKAC 1 cut(s) 708
XmnI GAANNNNTTC 3 cut(s) 51, 533, 1287
XspI CTAG 3 cut(s) 264, 1292, 1352
ZraI GACGTC 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.