Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 125 |
| AclWI | GGATC | 3 cut(s) | 46, 176, 189 |
| AcoI | YGGCCR | 1 cut(s) | 69 |
| AcuI | CTGAAG | 1 cut(s) | 222 |
| AjnI | CCWGG | 1 cut(s) | 160 |
| AluBI | AGCT | 2 cut(s) | 91, 257 |
| AluI | AGCT | 2 cut(s) | 91, 257 |
| Alw26I | GTCTC | 2 cut(s) | 170, 251 |
| AlwI | GGATC | 3 cut(s) | 46, 176, 189 |
| AoxI | GGCC | 1 cut(s) | 69 |
| ApeKI | GCWGC | 3 cut(s) | 7, 10, 144 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 207 |
| AsuHPI | GGTGA | 1 cut(s) | 20 |
| BalI | TGGCCA | 1 cut(s) | 71 |
| BamHI | GGATCC | 1 cut(s) | 181 |
| BbvI | GCAGC | 3 cut(s) | 19, 22, 156 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 86, 120 |
| BciT130I | CCWGG | 1 cut(s) | 162 |
| BclI | TGATCA | 1 cut(s) | 151 |
| BcoDI | GTCTC | 2 cut(s) | 170, 251 |
| BfaI | CTAG | 2 cut(s) | 138, 234 |
| BisI | GCNGC | 3 cut(s) | 8, 11, 145 |
| BlsI | GCNGC | 3 cut(s) | 9, 12, 146 |
| Bme1390I | CCNGG | 1 cut(s) | 162 |
| BmiI | GGNNCC | 1 cut(s) | 183 |
| BmrFI | CCNGG | 1 cut(s) | 162 |
| BmsI | GCATC | 3 cut(s) | 44, 118, 131 |
| BsaI | GGTCTC | 1 cut(s) | 170 |
| BseBI | CCWGG | 1 cut(s) | 162 |
| BseGI | GGATG | 2 cut(s) | 59, 133 |
| BseRI | GAGGAG | 1 cut(s) | 239 |
| BseXI | GCAGC | 3 cut(s) | 19, 22, 156 |
| BsgI | GTGCAG | 1 cut(s) | 26 |
| BshFI | GGCC | 1 cut(s) | 71 |
| BsmAI | GTCTC | 2 cut(s) | 170, 251 |
| BsnI | GGCC | 1 cut(s) | 71 |
| Bso31I | GGTCTC | 1 cut(s) | 170 |
| Bsp143I | GATC | 4 cut(s) | 38, 151, 181, 217 |
| BspACI | CCGC | 1 cut(s) | 125 |
| BspANI | GGCC | 1 cut(s) | 71 |
| BspHI | TCATGA | 1 cut(s) | 154 |
| BspLI | GGNNCC | 1 cut(s) | 183 |
| BspPI | GGATC | 3 cut(s) | 46, 176, 189 |
| BspTNI | GGTCTC | 1 cut(s) | 170 |
| BssMI | GATC | 4 cut(s) | 38, 151, 181, 217 |
| Bst2UI | CCWGG | 1 cut(s) | 162 |
| Bst4CI | ACNGT | 1 cut(s) | 245 |
| BstC8I | GCNNGC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 1 cut(s) | 253 |
| BstF5I | GGATG | 2 cut(s) | 59, 133 |
| BstKTI | GATC | 4 cut(s) | 41, 154, 184, 220 |
| BstMAI | GTCTC | 2 cut(s) | 170, 251 |
| BstMBI | GATC | 4 cut(s) | 38, 151, 181, 217 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 203 |
| BstNI | CCWGG | 1 cut(s) | 162 |
| BstSCI | CCNGG | 1 cut(s) | 160 |
| BstV1I | GCAGC | 3 cut(s) | 19, 22, 156 |
| BstX2I | RGATCY | 2 cut(s) | 38, 181 |
| BstYI | RGATCY | 2 cut(s) | 38, 181 |
| BsuRI | GGCC | 1 cut(s) | 71 |
| BtsCI | GGATG | 2 cut(s) | 59, 133 |
| Cac8I | GCNNGC | 1 cut(s) | 48 |
| CciI | TCATGA | 1 cut(s) | 154 |
| CsiI | ACCWGGT | 1 cut(s) | 160 |
| CviAII | CATG | 2 cut(s) | 155, 194 |
| CviJI | RGCY | 5 cut(s) | 71, 91, 137, 206, 257 |
| CviKI_1 | RGCY | 5 cut(s) | 71, 91, 137, 206, 257 |
| DdeI | CTNAG | 1 cut(s) | 253 |
| DpnI | GATC | 4 cut(s) | 40, 153, 183, 219 |
| DpnII | GATC | 4 cut(s) | 38, 151, 181, 217 |
| EaeI | YGGCCR | 1 cut(s) | 69 |
| Eco31I | GGTCTC | 1 cut(s) | 170 |
| Eco57I | CTGAAG | 1 cut(s) | 222 |
| EcoRII | CCWGG | 1 cut(s) | 160 |
| FaeI | CATG | 2 cut(s) | 158, 197 |
| FaiI | YATR | 6 cut(s) | 68, 77, 95, 119, 156, 195 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 195, 227 |
| FatI | CATG | 2 cut(s) | 154, 193 |
| FbaI | TGATCA | 1 cut(s) | 151 |
| Fnu4HI | GCNGC | 3 cut(s) | 8, 11, 145 |
| FokI | GGATG | 2 cut(s) | 66, 140 |
| Fsp4HI | GCNGC | 3 cut(s) | 8, 11, 145 |
| FspBI | CTAG | 2 cut(s) | 138, 234 |
| GluI | GCNGC | 3 cut(s) | 8, 11, 145 |
| HaeIII | GGCC | 1 cut(s) | 71 |
| Hin1II | CATG | 2 cut(s) | 158, 197 |
| HphI | GGTGA | 1 cut(s) | 20 |
| Hpy188III | TCNNGA | 3 cut(s) | 107, 155, 212 |
| HpyCH4III | ACNGT | 1 cut(s) | 245 |
| HpyCH4V | TGCA | 5 cut(s) | 7, 57, 79, 97, 144 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 203 |
| HpyF3I | CTNAG | 1 cut(s) | 253 |
| Hsp92II | CATG | 2 cut(s) | 158, 197 |
| Ksp22I | TGATCA | 1 cut(s) | 151 |
| Kzo9I | GATC | 4 cut(s) | 38, 151, 181, 217 |
| LpnPI | CCDG | 4 cut(s) | 36, 101, 147, 174 |
| Lsp1109I | GCAGC | 3 cut(s) | 19, 22, 156 |
| LweI | GCATC | 3 cut(s) | 44, 118, 131 |
| MabI | ACCWGGT | 1 cut(s) | 160 |
| MaeI | CTAG | 2 cut(s) | 138, 234 |
| MaeIII | GTNAC | 1 cut(s) | 229 |
| MalI | GATC | 4 cut(s) | 40, 153, 183, 219 |
| MboI | GATC | 4 cut(s) | 38, 151, 181, 217 |
| MflI | RGATCY | 2 cut(s) | 38, 181 |
| MlsI | TGGCCA | 1 cut(s) | 71 |
| MluNI | TGGCCA | 1 cut(s) | 71 |
| MnlI | CCTC | 3 cut(s) | 195, 260, 267 |
| Mox20I | TGGCCA | 1 cut(s) | 71 |
| MroXI | GAANNNNTTC | 1 cut(s) | 207 |
| MscI | TGGCCA | 1 cut(s) | 71 |
| MseI | TTAA | 1 cut(s) | 270 |
| Msp20I | TGGCCA | 1 cut(s) | 71 |
| MspA1I | CMGCKG | 1 cut(s) | 125 |
| MspR9I | CCNGG | 1 cut(s) | 162 |
| MvaI | CCWGG | 1 cut(s) | 162 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 203 |
| NdeII | GATC | 4 cut(s) | 38, 151, 181, 217 |
| NlaIII | CATG | 2 cut(s) | 158, 197 |
| NlaIV | GGNNCC | 1 cut(s) | 183 |
| PagI | TCATGA | 1 cut(s) | 154 |
| PdmI | GAANNNNTTC | 1 cut(s) | 207 |
| PkrI | GCNGC | 3 cut(s) | 9, 12, 146 |
| Psp6I | CCWGG | 1 cut(s) | 160 |
| PspGI | CCWGG | 1 cut(s) | 160 |
| PspN4I | GGNNCC | 1 cut(s) | 183 |
| PsuI | RGATCY | 2 cut(s) | 38, 181 |
| SaqAI | TTAA | 1 cut(s) | 270 |
| SatI | GCNGC | 3 cut(s) | 8, 11, 145 |
| Sau3AI | GATC | 4 cut(s) | 38, 151, 181, 217 |
| ScrFI | CCNGG | 1 cut(s) | 162 |
| SetI | ASST | 5 cut(s) | 21, 93, 163, 259, 278 |
| SexAI | ACCWGGT | 1 cut(s) | 160 |
| SfaNI | GCATC | 3 cut(s) | 44, 118, 131 |
| SsiI | CCGC | 1 cut(s) | 125 |
| SspMI | CTAG | 2 cut(s) | 138, 234 |
| StyD4I | CCNGG | 1 cut(s) | 160 |
| TaaI | ACNGT | 1 cut(s) | 245 |
| Tru1I | TTAA | 1 cut(s) | 270 |
| Tru9I | TTAA | 1 cut(s) | 270 |
| TseI | GCWGC | 3 cut(s) | 7, 10, 144 |
| TspDTI | ATGAA | 2 cut(s) | 171, 254 |
| XmnI | GAANNNNTTC | 1 cut(s) | 207 |
| XspI | CTAG | 2 cut(s) | 138, 234 |