Prupe.1G149800_v2.0.a1

hydrolase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
11757871 .. 11758439
569 bp
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UTR
Exon/CDS
Intron
Prupe.1G149800.1

Sequence Viewer

Length: 231 bp
ATGTCAAGTGTTGAATGCTTCAAGAACCCACCAGCACTGGGCTCAACATCTGGAGCAGGGACTCTCCTAGAACTTGGGGGACTTAAAACCTACTTCACTGGCCCAAGTGAATCCAAGCATGCCATCCTTCTAGGCTCAGATGTTTTTGGGTATGAAAACCTAAATTTAAGGTATGGTTCTCTTCTCCCCAATTATGTCAGGGGTCAATGGTTCTACTTTATTAATCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

77

Amino Acids

8.32

Weight (kDa)

6.53

Isoelectric Point (pI)

37.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000177)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23570 AT3G23570 AT3G23570 AT3G23600 AT3G23600
fragaria_vesca FvH4_2g23960 FvH4_2g23960 FvH4_2g23960 FvH4_4g14311 FvH4_4g14311 FvH4_4g14311 FvH4_4g14311 FvH4_4g14330 FvH4_6g28031 FvH4_6g29270
malus_domestica MD13G1181200.v1.1 MD13G1181300.v1.1 MD13G1181400.v1.1 MD13G1181500.v1.1 MD13G1181600.v1.1 MD13G1181700.v1.1 MD13G1181800.v1.1 MD13G1181900.v1.1 MD15G1403300.v1.1 MD15G1403400.v1.1 MD16G1181900.v1.1 MD16G1182000.v1.1 MD16G1182200.v1.1 MD16G1182300.v1.1 MD16G1182400.v1.1
prunus_persica Prupe.1G149400_v2.0.a1 Prupe.1G149600_v2.0.a1 Prupe.1G149700_v2.0.a1 Prupe.1G149800_v2.0.a1 Prupe.1G549400_v2.0.a1 Prupe.8G245600_v2.0.a1
pyrus_communis pycom13g15640 pycom13g15650 pycom13g15670 pycom13g15700 pycom15g36070 pycom16g15270 pycom16g15300 pycom16g15310
rosa_chinensis RchiOBHm_Chr1g0334461 RchiOBHm_Chr1g0334471 RchiOBHm_Chr2g0131731 RchiOBHm_Chr4g0417881 RchiOBHm_Chr4g0418561 RchiOBHm_Chr4g0418571 RchiOBHm_Chr4g0418581 RchiOBHm_Chr4g0418591 RchiOBHm_Chr4g0418601 RchiOBHm_Chr4g0418621 RchiOBHm_Chr4g0418651 RchiOBHm_Chr4g0418661 RchiOBHm_Chr4g0418671 RchiOBHm_Chr4g0418681 RchiOBHm_Chr4g0418691 RchiOBHm_Chr4g0418701 RchiOBHm_Chr4g0421371 RchiOBHm_Chr6g0291601 RchiOBHm_Chr6g0291611 RchiOBHm_Chr6g0291621 RchiOBHm_Chr6g0291631 RchiOBHm_Chr7g0229821
rosa_laevigata RLG00000007843 RLG00000007844 RLG00000007846 RLG00000007847 RLG00000007849 RLG00000012101 RLG00000012104 RLG00000029451
rosa_multiflora Rmu_sc0000363.1_g000035 Rmu_sc0000935.1_g000003 Rmu_sc0000935.1_g000010 Rmu_sc0002226.1_g000008 Rmu_sc0002226.1_g000014 Rmu_sc0002589.1_g000031 Rmu_sc0003443.1_g000009 Rmu_sc0006431.1_g000001 Rmu_sc0006431.1_g000006 Rmu_sc0006431.1_g000023 Rmu_sc0006705.1_g000014 Rmu_sc0006705.1_g000015 Rmu_sc0006705.1_g000016 Rmu_sc0006705.1_g000017 Rmu_sc0006705.1_g000018 Rmu_sc0014797.1_g000001 Rmu_sc0041885.1_g000001
rosa_roxburghii Rroxscaffold_4G00316820 Rroxscaffold_5G00361830 Rroxscaffold_5G00361840 Rroxscaffold_5G00361850 Rroxscaffold_5G00361860 Rroxscaffold_5G00361880 Rroxscaffold_5G00361890 Rroxscaffold_5G00361900 Rroxscaffold_5G00361910 Rroxscaffold_5G00361920 Rroxscaffold_5G00361930 Rroxscaffold_7G00175910 Rroxscaffold_7G00175930 Rroxscaffold_7G00175940
rosa_rugosa Rorug02G0299300 Rorug04G0154500 Rorug04G0154600 Rorug04G0154700 Rorug06G0220500
rosa_samantha Rh1AG006300 Rh1AG139200 Rh1AG139300 Rh1BG105600 Rh1CG131200 Rh1CG131300 Rh1DG143200 Rh2AG210000 Rh2CG337500 Rh2DG216200 Rh2DG376200 Rh4AG215900 Rh4AG216000 Rh4AG216100 Rh4AG216200 Rh4AG216300 Rh4AG216400 Rh4BG214300 Rh4BG214400 Rh4BG214500 Rh4BG214600 Rh4BG214700 Rh4BG214800 Rh4CG212300 Rh4CG227500 Rh4CG227700 Rh4CG227900 Rh4CG228000 Rh4CG228100 Rh4DG214200 Rh4DG215000 Rh4DG215200 Rh5AG059400 Rh6AG332900 Rh6AG333000 Rh6AG333100 Rh6BG339700 Rh6BG339900 Rh6CG346100 Rh6CG346200 Rh6DG333300 Rh6DG333400 Rh7AG435400 Rh7CG454500
rosa_wichuraiana Rw1G011480 Rw2G028580 Rw4G018270 Rw4G018280 Rw4G018290 Rw4G018360 Rw4G018390 Rw4G018400 Rw4G018410 Rw4G018420 Rw6G028910 Rw6G029000 Rw6G029010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 163
AfiI CCNNNNNNNGG 1 cut(s) 38
AgsI TTSAA 2 cut(s) 14, 22
AoxI GGCC 1 cut(s) 100
ApoI RAATTY 1 cut(s) 163
AseI ATTAAT 1 cut(s) 222
AspS9I GGNCC 1 cut(s) 101
BanII GRGCYC 1 cut(s) 44
BccI CCATC 1 cut(s) 131
BfaI CTAG 2 cut(s) 68, 131
BmgT120I GGNCC 1 cut(s) 101
BmrI ACTGGG 1 cut(s) 47
BmuI ACTGGG 1 cut(s) 47
BpmI CTGGAG 1 cut(s) 72
Bsc4I CCNNNNNNNGG 1 cut(s) 38
Bse1I ACTGG 2 cut(s) 42, 103
BseGI GGATG 1 cut(s) 123
BseLI CCNNNNNNNGG 1 cut(s) 38
BseMII CTCAG 1 cut(s) 150
BseNI ACTGG 2 cut(s) 42, 103
BshFI GGCC 1 cut(s) 102
BslFI GGGAC 2 cut(s) 73, 93
BslI CCNNNNNNNGG 1 cut(s) 38
BsmFI GGGAC 2 cut(s) 73, 93
BsmI GAATGC 1 cut(s) 20
BsnI GGCC 1 cut(s) 102
Bsp1286I GDGCHC 1 cut(s) 44
BspANI GGCC 1 cut(s) 102
BspCNI CTCAG 1 cut(s) 149
BsrI ACTGG 2 cut(s) 42, 103
Bst6I CTCTTC 1 cut(s) 186
BstC8I GCNNGC 1 cut(s) 120
BstDEI CTNAG 1 cut(s) 136
BstF5I GGATG 1 cut(s) 123
BstNSI RCATGY 1 cut(s) 122
BsuRI GGCC 1 cut(s) 102
BtsCI GGATG 1 cut(s) 123
BtsIMutI CAGTG 2 cut(s) 35, 96
Cac8I GCNNGC 1 cut(s) 120
Cfr13I GGNCC 1 cut(s) 101
CviAII CATG 1 cut(s) 119
CviJI RGCY 3 cut(s) 42, 102, 135
CviKI_1 RGCY 3 cut(s) 42, 102, 135
DdeI CTNAG 1 cut(s) 136
Eam1104I CTCTTC 1 cut(s) 186
EarI CTCTTC 1 cut(s) 186
Eco24I GRGCYC 1 cut(s) 44
EcoT38I GRGCYC 1 cut(s) 44
FaeI CATG 1 cut(s) 122
FaiI YATR 4 cut(s) 120, 153, 174, 195
FaqI GGGAC 2 cut(s) 73, 93
FatI CATG 1 cut(s) 118
FokI GGATG 1 cut(s) 110
FriOI GRGCYC 1 cut(s) 44
FspBI CTAG 2 cut(s) 68, 131
GsuI CTGGAG 1 cut(s) 72
HaeIII GGCC 1 cut(s) 102
Hin1II CATG 1 cut(s) 122
HinfI GANTC 2 cut(s) 61, 110
Hpy188I TCNGA 1 cut(s) 139
Hpy188III TCNNGA 2 cut(s) 22, 51
HpyAV CCTTC 1 cut(s) 137
HpyF3I CTNAG 1 cut(s) 136
Hsp92II CATG 1 cut(s) 122
LmnI GCTCC 1 cut(s) 53
LpnPI CCDG 6 cut(s) 23, 36, 42, 45, 84, 184
MaeI CTAG 2 cut(s) 68, 131
MboII GAAGA 1 cut(s) 173
MhlI GDGCHC 1 cut(s) 44
MluCI AATT 2 cut(s) 163, 190
MlyI GAGTC 1 cut(s) 55
MseI TTAA 3 cut(s) 84, 167, 222
Mva1269I GAATGC 1 cut(s) 20
NlaIII CATG 1 cut(s) 122
NspI RCATGY 1 cut(s) 122
PaeI GCATGC 1 cut(s) 122
PctI GAATGC 1 cut(s) 20
PfeI GAWTC 1 cut(s) 110
PleI GAGTC 1 cut(s) 55
PpsI GAGTC 1 cut(s) 55
PshBI ATTAAT 1 cut(s) 222
PspPI GGNCC 1 cut(s) 101
SaqAI TTAA 3 cut(s) 84, 167, 222
Sau96I GGNCC 1 cut(s) 101
SchI GAGTC 1 cut(s) 55
SduI GDGCHC 1 cut(s) 44
SetI ASST 3 cut(s) 92, 162, 173
SphI GCATGC 1 cut(s) 122
Sse9I AATT 2 cut(s) 163, 190
SspMI CTAG 2 cut(s) 68, 131
TasI AATT 2 cut(s) 163, 190
TfiI GAWTC 1 cut(s) 110
Tru1I TTAA 3 cut(s) 84, 167, 222
Tru9I TTAA 3 cut(s) 84, 167, 222
TscAI CASTG 2 cut(s) 42, 103
TspDTI ATGAA 1 cut(s) 168
TspRI CASTG 2 cut(s) 42, 103
VspI ATTAAT 1 cut(s) 222
XapI RAATTY 1 cut(s) 163
XceI RCATGY 1 cut(s) 122
XspI CTAG 2 cut(s) 68, 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.