Rh2CG337500

1,4-beta-D-glucanase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
44757870 .. 44762470
4601 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG337500.1

Sequence Viewer

Length: 315 bp
ATGTCAGGCCCTCAGTGCTGTTCTAACCCACCAATTATCAAGACAAGCTGTGGTTCAGACTCCGCTGAAAAATTTGGAGGCCTTACTGTCTATGTGACAGGATCTCCTAACTCCAAGCGTGCTATTCTTCTTATCTCTGATGTTTTTGGATATGGAGCTCCCAACTTGAGGAAGCTTGCAGGAAGAGTTGCCACTTCTGGATTCTATGTTGTAGTTCCAGACTTCTTCTATGGAGATGCGTTTGTGTATGACAATAACAGGCCTCTAGCAGTCTGGTTAAAAGATCATGGAACGGCTAATGTTCCTATTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

11.06

Weight (kDa)

8.5

Isoelectric Point (pI)

39.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DLH PF01738 30 - 84 3.8e-07 Dienelactone hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000177)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G23570 AT3G23570 AT3G23570 AT3G23600 AT3G23600
fragaria_vesca FvH4_2g23960 FvH4_2g23960 FvH4_2g23960 FvH4_4g14311 FvH4_4g14311 FvH4_4g14311 FvH4_4g14311 FvH4_4g14330 FvH4_6g28031 FvH4_6g29270
malus_domestica MD13G1181200.v1.1 MD13G1181300.v1.1 MD13G1181400.v1.1 MD13G1181500.v1.1 MD13G1181600.v1.1 MD13G1181700.v1.1 MD13G1181800.v1.1 MD13G1181900.v1.1 MD15G1403300.v1.1 MD15G1403400.v1.1 MD16G1181900.v1.1 MD16G1182000.v1.1 MD16G1182200.v1.1 MD16G1182300.v1.1 MD16G1182400.v1.1
prunus_persica Prupe.1G149400_v2.0.a1 Prupe.1G149600_v2.0.a1 Prupe.1G149700_v2.0.a1 Prupe.1G149800_v2.0.a1 Prupe.1G549400_v2.0.a1 Prupe.8G245600_v2.0.a1
pyrus_communis pycom13g15640 pycom13g15650 pycom13g15670 pycom13g15700 pycom15g36070 pycom16g15270 pycom16g15300 pycom16g15310
rosa_chinensis RchiOBHm_Chr1g0334461 RchiOBHm_Chr1g0334471 RchiOBHm_Chr2g0131731 RchiOBHm_Chr4g0417881 RchiOBHm_Chr4g0418561 RchiOBHm_Chr4g0418571 RchiOBHm_Chr4g0418581 RchiOBHm_Chr4g0418591 RchiOBHm_Chr4g0418601 RchiOBHm_Chr4g0418621 RchiOBHm_Chr4g0418651 RchiOBHm_Chr4g0418661 RchiOBHm_Chr4g0418671 RchiOBHm_Chr4g0418681 RchiOBHm_Chr4g0418691 RchiOBHm_Chr4g0418701 RchiOBHm_Chr4g0421371 RchiOBHm_Chr6g0291601 RchiOBHm_Chr6g0291611 RchiOBHm_Chr6g0291621 RchiOBHm_Chr6g0291631 RchiOBHm_Chr7g0229821
rosa_laevigata RLG00000007843 RLG00000007844 RLG00000007846 RLG00000007847 RLG00000007849 RLG00000012101 RLG00000012104 RLG00000029451
rosa_multiflora Rmu_sc0000363.1_g000035 Rmu_sc0000935.1_g000003 Rmu_sc0000935.1_g000010 Rmu_sc0002226.1_g000008 Rmu_sc0002226.1_g000014 Rmu_sc0002589.1_g000031 Rmu_sc0003443.1_g000009 Rmu_sc0006431.1_g000001 Rmu_sc0006431.1_g000006 Rmu_sc0006431.1_g000023 Rmu_sc0006705.1_g000014 Rmu_sc0006705.1_g000015 Rmu_sc0006705.1_g000016 Rmu_sc0006705.1_g000017 Rmu_sc0006705.1_g000018 Rmu_sc0014797.1_g000001 Rmu_sc0041885.1_g000001
rosa_roxburghii Rroxscaffold_4G00316820 Rroxscaffold_5G00361830 Rroxscaffold_5G00361840 Rroxscaffold_5G00361850 Rroxscaffold_5G00361860 Rroxscaffold_5G00361880 Rroxscaffold_5G00361890 Rroxscaffold_5G00361900 Rroxscaffold_5G00361910 Rroxscaffold_5G00361920 Rroxscaffold_5G00361930 Rroxscaffold_7G00175910 Rroxscaffold_7G00175930 Rroxscaffold_7G00175940
rosa_rugosa Rorug02G0299300 Rorug04G0154500 Rorug04G0154600 Rorug04G0154700 Rorug06G0220500
rosa_samantha Rh1AG006300 Rh1AG139200 Rh1AG139300 Rh1BG105600 Rh1CG131200 Rh1CG131300 Rh1DG143200 Rh2AG210000 Rh2CG337500 Rh2DG216200 Rh2DG376200 Rh4AG215900 Rh4AG216000 Rh4AG216100 Rh4AG216200 Rh4AG216300 Rh4AG216400 Rh4BG214300 Rh4BG214400 Rh4BG214500 Rh4BG214600 Rh4BG214700 Rh4BG214800 Rh4CG212300 Rh4CG227500 Rh4CG227700 Rh4CG227900 Rh4CG228000 Rh4CG228100 Rh4DG214200 Rh4DG215000 Rh4DG215200 Rh5AG059400 Rh6AG332900 Rh6AG333000 Rh6AG333100 Rh6BG339700 Rh6BG339900 Rh6CG346100 Rh6CG346200 Rh6DG333300 Rh6DG333400 Rh7AG435400 Rh7CG454500
rosa_wichuraiana Rw1G011480 Rw2G028580 Rw4G018270 Rw4G018280 Rw4G018290 Rw4G018360 Rw4G018390 Rw4G018400 Rw4G018410 Rw4G018420 Rw6G028910 Rw6G029000 Rw6G029010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 63
AclWI GGATC 1 cut(s) 109
AcsI RAATTY 1 cut(s) 71
AfiI CCNNNNNNNGG 1 cut(s) 168
AluBI AGCT 3 cut(s) 48, 158, 175
AluI AGCT 3 cut(s) 48, 158, 175
Alw21I GWGCWC 1 cut(s) 160
AlwI GGATC 1 cut(s) 109
AoxI GGCC 3 cut(s) 7, 79, 260
ApoI RAATTY 1 cut(s) 71
AspS9I GGNCC 1 cut(s) 8
BanII GRGCYC 1 cut(s) 160
Bbv12I GWGCWC 1 cut(s) 160
BceAI ACGGC 1 cut(s) 309
BfaI CTAG 1 cut(s) 266
BmgT120I GGNCC 1 cut(s) 8
BmsI GCATC 1 cut(s) 226
BpuEI CTTGAG 1 cut(s) 187
BsaXI ACNNNNNCTCC 2 cut(s) 88, 118
Bsc4I CCNNNNNNNGG 1 cut(s) 168
BseLI CCNNNNNNNGG 1 cut(s) 168
BseMII CTCAG 1 cut(s) 26
BshFI GGCC 3 cut(s) 9, 81, 262
BsiHKAI GWGCWC 1 cut(s) 160
BslI CCNNNNNNNGG 1 cut(s) 168
BsnI GGCC 3 cut(s) 9, 81, 262
Bsp1286I GDGCHC 1 cut(s) 160
Bsp143I GATC 2 cut(s) 101, 283
BspACI CCGC 1 cut(s) 63
BspANI GGCC 3 cut(s) 9, 81, 262
BspCNI CTCAG 1 cut(s) 25
BspPI GGATC 1 cut(s) 109
BssMI GATC 2 cut(s) 101, 283
Bst4CI ACNGT 1 cut(s) 88
Bst6I CTCTTC 1 cut(s) 178
BstC8I GCNNGC 2 cut(s) 120, 177
BstDEI CTNAG 1 cut(s) 12
BstKTI GATC 2 cut(s) 104, 286
BstMBI GATC 2 cut(s) 101, 283
BstMWI GCNNNNNNNGC 1 cut(s) 15
BstX2I RGATCY 1 cut(s) 101
BstYI RGATCY 1 cut(s) 101
BsuRI GGCC 3 cut(s) 9, 81, 262
BtsIMutI CAGTG 1 cut(s) 20
Cac8I GCNNGC 2 cut(s) 120, 177
Cfr13I GGNCC 1 cut(s) 8
CviAII CATG 1 cut(s) 287
CviJI RGCY 7 cut(s) 9, 48, 81, 158, 175, 262, 296
CviKI_1 RGCY 7 cut(s) 9, 48, 81, 158, 175, 262, 296
DdeI CTNAG 1 cut(s) 12
DpnI GATC 2 cut(s) 103, 285
DpnII GATC 2 cut(s) 101, 283
Eam1104I CTCTTC 1 cut(s) 178
EarI CTCTTC 1 cut(s) 178
Ecl136II GAGCTC 1 cut(s) 158
Eco147I AGGCCT 2 cut(s) 81, 262
Eco24I GRGCYC 1 cut(s) 160
Eco53kI GAGCTC 1 cut(s) 158
EcoICRI GAGCTC 1 cut(s) 158
EcoO109I RGGNCCY 1 cut(s) 8
EcoT38I GRGCYC 1 cut(s) 160
FaeI CATG 1 cut(s) 290
FaiI YATR 7 cut(s) 93, 153, 207, 231, 249, 288, 313
FatI CATG 1 cut(s) 286
FriOI GRGCYC 1 cut(s) 160
FspBI CTAG 1 cut(s) 266
HaeIII GGCC 3 cut(s) 9, 81, 262
Hin1II CATG 1 cut(s) 290
HindIII AAGCTT 1 cut(s) 173
HinfI GANTC 2 cut(s) 59, 201
Hpy188I TCNGA 2 cut(s) 58, 139
Hpy188III TCNNGA 3 cut(s) 40, 198, 218
HpyCH4III ACNGT 1 cut(s) 88
HpyCH4V TGCA 2 cut(s) 179, 311
HpyF10VI GCNNNNNNNGC 1 cut(s) 15
HpyF3I CTNAG 1 cut(s) 12
Hsp92II CATG 1 cut(s) 290
Kzo9I GATC 2 cut(s) 101, 283
LmnI GCTCC 2 cut(s) 155, 163
LpnPI CCDG 6 cut(s) 84, 165, 183, 231, 244, 259
LweI GCATC 1 cut(s) 226
MaeI CTAG 1 cut(s) 266
MaeIII GTNAC 1 cut(s) 94
MalI GATC 2 cut(s) 103, 285
MboI GATC 2 cut(s) 101, 283
MboII GAAGA 3 cut(s) 119, 195, 217
MflI RGATCY 1 cut(s) 101
MhlI GDGCHC 1 cut(s) 160
MluCI AATT 2 cut(s) 33, 71
MlyI GAGTC 1 cut(s) 53
MnlI CCTC 4 cut(s) 21, 71, 162, 273
MseI TTAA 1 cut(s) 278
MspA1I CMGCKG 1 cut(s) 65
MwoI GCNNNNNNNGC 1 cut(s) 15
NdeII GATC 2 cut(s) 101, 283
NlaIII CATG 1 cut(s) 290
NmuCI GTSAC 1 cut(s) 94
PceI AGGCCT 2 cut(s) 81, 262
PfeI GAWTC 1 cut(s) 201
PleI GAGTC 1 cut(s) 53
PpsI GAGTC 1 cut(s) 53
Psp124BI GAGCTC 1 cut(s) 160
PspPI GGNCC 1 cut(s) 8
PsuI RGATCY 1 cut(s) 101
SacI GAGCTC 1 cut(s) 160
SaqAI TTAA 1 cut(s) 278
Sau3AI GATC 2 cut(s) 101, 283
Sau96I GGNCC 1 cut(s) 8
SchI GAGTC 1 cut(s) 53
SduI GDGCHC 1 cut(s) 160
SetI ASST 3 cut(s) 50, 160, 177
SfaNI GCATC 1 cut(s) 226
SmlI CTYRAG 1 cut(s) 166
SmoI CTYRAG 1 cut(s) 166
Sse9I AATT 2 cut(s) 33, 71
SseBI AGGCCT 2 cut(s) 81, 262
SsiI CCGC 1 cut(s) 63
SspMI CTAG 1 cut(s) 266
SstI GAGCTC 1 cut(s) 160
StuI AGGCCT 2 cut(s) 81, 262
TaaI ACNGT 1 cut(s) 88
TasI AATT 2 cut(s) 33, 71
TfiI GAWTC 1 cut(s) 201
Tru1I TTAA 1 cut(s) 278
Tru9I TTAA 1 cut(s) 278
TscAI CASTG 1 cut(s) 20
TseFI GTSAC 1 cut(s) 94
Tsp45I GTSAC 1 cut(s) 94
TspRI CASTG 1 cut(s) 20
XapI RAATTY 1 cut(s) 71
XspI CTAG 1 cut(s) 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.