AT5G48550

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000125
Physical Location & Seq
Forward (+)
19678825 .. 19680560
1736 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G48550.1

Sequence Viewer

Length: 1284 bp
ATGATTCTAAGAAAATTACCAGGAAAACAAGCATTGATCTGCCGTTGTGTCTCCAAGACGTTTCTTAGTGTTTTAGACTCTCCTTGCTTCATGGAGAGACATCTTCGTGATGATCATGATGACGGTGAACCTCCAGCTTTGCTCACTTATGGAGTCCATGATGTAGCAGTCTTTTATAAGCTGTGGATGTGTAAGACGATGCTGGAAGAGAGTGATGAAGCAAAAGTGTTGAAGGTGGACGATCGACACCTTTGGAATTATCCTTGCATAGAAACACAATCTTATTTTCACCCTATAAGCTCGGGTGGACTAATTCTAACCAGATGTAATTCTAATAGTCCGTTTGTCTTCAACCCTATACGGAAAGAGGTTATGAAGATACCAGCACAGGGGGACGAAAACGCATGGAAACAGCCTCTAGGATTCGGATATGATCCCAAAGGAAACACTCACAAGATCATTAGTGTTTGGGAGACACAAGAGCACGTGCTTGTGGCCGAAATATTCAGCCTCGGAGATACAGACACAAAATGGAGGAGCTTAGACATCTCCTCTTCCGCCTCCGCTCTACCTTTCGGCCATGTTTCCTTCTCTTCTTCCACGGTGACAATTGGTGGATATGTTTATTGGACTGCCACTATAAGCGAGGGGTCTCTCGTCCAACTCTTCCGCCTCACTAATCTTCGAGGGACCTTGGCAATGGTGGATTTTTCTTCCGAGGAGTGTTTAGGGTTGTGGACACTGAGAGACAAGGCGAGAGGAGAATGGTCTTTCGACTACAGATTTGACGCCAATGTGTTCAGAGACAAAGTGGGATGCTTCTGCCGCGGCCATGACTGGAGTACTAACAGATTACATGTGGTCGGTGCTTGGAAGGAAGGATTGCTTCTACGGATTTGGGACTCTACTGTCTGTATTTACTTGAATTTCAAGACAACACGTATGGAGTATATTGGGTTTGAGAATGAGATTCAAGGATTAATAAGTCGGGATTTCATCATCAGTTATACTCCTAATTATCTACTACGTCTCAAGACTTACTATGACCAATCAAGAGTCATATGTGCTCATCCTCATGCTGGTGCACGTCTTCGAGGACGTCTCCATTTTATGCTTACGGGCGTAGATGATCTTCTTTATGAGTTTAGGTATTGTTTTGATACTTTACACTCCACATTTGATGAGCTTATTGGTTTTAGGTATAATGAAGACCGCCGTGAAAAAGACAAACTACTTGAGAAAATTGTAAAAATGAAGGATAAAGCTGAATGGATTTTTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

427

Amino Acids

49.49

Weight (kDa)

6.54

Isoelectric Point (pI)

30.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 82 - 218 5.1e-10 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 177
AasI GACNNNNNNGTC 1 cut(s) 908
AatII GACGTC 1 cut(s) 1102
AccBSI CCGCTC 1 cut(s) 566
AccII CGCG 1 cut(s) 828
AciI CCGC 6 cut(s) 558, 564, 670, 826, 828, 1213
AclWI GGATC 1 cut(s) 428
AcoI YGGCCR 3 cut(s) 495, 577, 829
AcsI RAATTY 1 cut(s) 925
AcvI CACGTG 1 cut(s) 487
AcyI GRCGYC 2 cut(s) 789, 1099
AfaI GTAC 1 cut(s) 844
AfiI CCNNNNNNNGG 2 cut(s) 389, 1079
AflIII ACRYGT 2 cut(s) 856, 938
AgsI TTSAA 5 cut(s) 232, 352, 925, 931, 974
AjiI CACGTC 1 cut(s) 1088
AjnI CCWGG 1 cut(s) 19
AluBI AGCT 6 cut(s) 137, 181, 300, 540, 1186, 1265
AluI AGCT 6 cut(s) 137, 181, 300, 540, 1186, 1265
Alw21I GWGCWC 3 cut(s) 486, 1069, 1087
Alw26I GTCTC 8 cut(s) 55, 91, 467, 657, 741, 798, 1034, 1106
Alw44I GTGCAC 1 cut(s) 1083
AlwI GGATC 1 cut(s) 428
Ama87I CYCGRG 1 cut(s) 301
AoxI GGCC 3 cut(s) 495, 577, 829
ApaLI GTGCAC 1 cut(s) 1083
ApoI RAATTY 1 cut(s) 925
ArsI GACNNNNNNTTYG 2 cut(s) 767, 799
AseI ATTAAT 1 cut(s) 980
AspS9I GGNCC 1 cut(s) 690
AsuHPI GGTGA 3 cut(s) 137, 281, 616
AvaI CYCGRG 1 cut(s) 301
AvaII GGWCC 1 cut(s) 690
BaeGI GKGCMC 1 cut(s) 1087
BarI GAAGNNNNNNTAC 2 cut(s) 1116, 1148
BbrPI CACGTG 1 cut(s) 487
BbsI GAAGAC 3 cut(s) 340, 1082, 1215
Bbv12I GWGCWC 3 cut(s) 486, 1069, 1087
BceAI ACGGC 2 cut(s) 27, 1200
BciT130I CCWGG 1 cut(s) 21
BclI TGATCA 1 cut(s) 112
BcoDI GTCTC 8 cut(s) 55, 91, 467, 657, 741, 798, 1034, 1106
BfaI CTAG 1 cut(s) 419
BfmI CTRYAG 1 cut(s) 778
BisI GCNGC 2 cut(s) 826, 829
BlsI GCNGC 2 cut(s) 827, 830
BmcAI AGTACT 1 cut(s) 844
Bme1390I CCNGG 1 cut(s) 21
Bme18I GGWCC 1 cut(s) 690
BmeT110I CYCGRG 1 cut(s) 301
BmgBI CACGTC 1 cut(s) 1088
BmgT120I GGNCC 1 cut(s) 690
BmiI GGNNCC 1 cut(s) 691
BmrFI CCNGG 1 cut(s) 21
BmsI GCATC 2 cut(s) 189, 806
BpiI GAAGAC 3 cut(s) 340, 1082, 1215
BplI GAGNNNNNCTC 2 cut(s) 1086, 1118
BpmI CTGGAG 2 cut(s) 117, 859
BpuEI CTTGAG 2 cut(s) 1016, 1256
BsaAI YACGTR 2 cut(s) 487, 941
BsaHI GRCGYC 2 cut(s) 789, 1099
BsaI GGTCTC 1 cut(s) 657
BsaJI CCNNGG 5 cut(s) 511, 600, 693, 717, 826
Bsc4I CCNNNNNNNGG 2 cut(s) 389, 1079
Bse1I ACTGG 1 cut(s) 842
Bse3DI GCAATG 1 cut(s) 705
BseBI CCWGG 1 cut(s) 21
BseDI CCNNGG 5 cut(s) 511, 600, 693, 717, 826
BseGI GGATG 3 cut(s) 192, 821, 1069
BseLI CCNNNNNNNGG 2 cut(s) 389, 1079
BseMI GCAATG 1 cut(s) 705
BseMII CTCAG 1 cut(s) 734
BseNI ACTGG 1 cut(s) 842
BseRI GAGGAG 4 cut(s) 541, 550, 734, 774
BseSI GKGCMC 1 cut(s) 1087
Bsh1236I CGCG 1 cut(s) 828
Bsh1285I CGRYCG 1 cut(s) 244
BshFI GGCC 3 cut(s) 497, 579, 831
BsiEI CGRYCG 1 cut(s) 244
BsiHKAI GWGCWC 3 cut(s) 486, 1069, 1087
BsiHKCI CYCGRG 1 cut(s) 301
BslFI GGGAC 3 cut(s) 407, 703, 914
BslI CCNNNNNNNGG 2 cut(s) 389, 1079
BsmAI GTCTC 8 cut(s) 55, 91, 467, 657, 741, 798, 1034, 1106
BsmBI CGTCTC 2 cut(s) 1034, 1106
BsmFI GGGAC 3 cut(s) 407, 703, 914
BsnI GGCC 3 cut(s) 497, 579, 831
Bso31I GGTCTC 1 cut(s) 657
BsoBI CYCGRG 1 cut(s) 301
Bsp1286I GDGCHC 3 cut(s) 486, 1069, 1087
Bsp143I GATC 6 cut(s) 36, 112, 241, 433, 456, 1129
BspACI CCGC 6 cut(s) 558, 564, 670, 826, 828, 1213
BspANI GGCC 3 cut(s) 497, 579, 831
BspCNI CTCAG 1 cut(s) 735
BspFNI CGCG 1 cut(s) 828
BspHI TCATGA 1 cut(s) 115
BspLI GGNNCC 1 cut(s) 691
BspPI GGATC 1 cut(s) 428
BspTNI GGTCTC 1 cut(s) 657
BsrBI CCGCTC 1 cut(s) 566
BsrDI GCAATG 1 cut(s) 705
BsrI ACTGG 1 cut(s) 842
BssECI CCNNGG 5 cut(s) 511, 600, 693, 717, 826
BssMI GATC 6 cut(s) 36, 112, 241, 433, 456, 1129
BssNI GRCGYC 2 cut(s) 789, 1099
BssT1I CCWWGG 1 cut(s) 693
Bst2UI CCWGG 1 cut(s) 21
Bst4CI ACNGT 3 cut(s) 125, 604, 910
Bst6I CTCTTC 4 cut(s) 201, 559, 598, 671
BstACI GRCGYC 2 cut(s) 789, 1099
BstBAI YACGTR 2 cut(s) 487, 941
BstDEI CTNAG 4 cut(s) 8, 65, 541, 743
BstDSI CCRYGG 2 cut(s) 600, 826
BstF5I GGATG 3 cut(s) 192, 821, 1069
BstFNI CGCG 1 cut(s) 828
BstKTI GATC 6 cut(s) 39, 115, 244, 436, 459, 1132
BstMAI GTCTC 8 cut(s) 55, 91, 467, 657, 741, 798, 1034, 1106
BstMBI GATC 6 cut(s) 36, 112, 241, 433, 456, 1129
BstMCI CGRYCG 1 cut(s) 244
BstMWI GCNNNNNNNGC 1 cut(s) 825
BstNI CCWGG 1 cut(s) 21
BstNSI RCATGY 1 cut(s) 860
BstSCI CCNGG 1 cut(s) 19
BstSFI CTRYAG 1 cut(s) 778
BstSLI GKGCMC 1 cut(s) 1087
BstUI CGCG 1 cut(s) 828
BstV2I GAAGAC 3 cut(s) 340, 1082, 1215
BsuRI GGCC 3 cut(s) 497, 579, 831
BtgI CCRYGG 2 cut(s) 600, 826
BtrI CACGTC 1 cut(s) 1088
BtsCI GGATG 3 cut(s) 192, 821, 1069
BtsIMutI CAGTG 1 cut(s) 740
CciI TCATGA 1 cut(s) 115
Cfr13I GGNCC 1 cut(s) 690
Cfr42I CCGCGG 1 cut(s) 829
CseI GACGC 1 cut(s) 797
Csp6I GTAC 1 cut(s) 843
CviAII CATG 8 cut(s) 91, 116, 158, 405, 581, 833, 857, 1076
CviQI GTAC 1 cut(s) 843
DdeI CTNAG 4 cut(s) 8, 65, 541, 743
DpnI GATC 6 cut(s) 38, 114, 243, 435, 458, 1131
DpnII GATC 6 cut(s) 36, 112, 241, 433, 456, 1129
DrdI GACNNNNNNGTC 1 cut(s) 908
DseDI GACNNNNNNGTC 1 cut(s) 908
EaeI YGGCCR 3 cut(s) 495, 577, 829
Eam1104I CTCTTC 4 cut(s) 201, 559, 598, 671
EarI CTCTTC 4 cut(s) 201, 559, 598, 671
EciI GGCGGA 2 cut(s) 547, 659
Eco130I CCWWGG 1 cut(s) 693
Eco31I GGTCTC 1 cut(s) 657
Eco47I GGWCC 1 cut(s) 690
Eco72I CACGTG 1 cut(s) 487
Eco88I CYCGRG 1 cut(s) 301
EcoO109I RGGNCCY 1 cut(s) 690
EcoRII CCWGG 1 cut(s) 19
EcoT14I CCWWGG 1 cut(s) 693
ErhI CCWWGG 1 cut(s) 693
Esp3I CGTCTC 2 cut(s) 1034, 1106
FaeI CATG 8 cut(s) 94, 119, 161, 408, 584, 836, 860, 1079
FalI AAGNNNNNCTT 2 cut(s) 870, 902
FaqI GGGAC 3 cut(s) 407, 703, 914
FatI CATG 8 cut(s) 90, 115, 157, 404, 580, 832, 856, 1075
FauNDI CATATG 1 cut(s) 1061
FbaI TGATCA 1 cut(s) 112
Fnu4HI GCNGC 2 cut(s) 826, 829
FokI GGATG 3 cut(s) 199, 828, 1056
Fsp4HI GCNGC 2 cut(s) 826, 829
FspBI CTAG 1 cut(s) 419
GluI GCNGC 2 cut(s) 826, 829
GsuI CTGGAG 2 cut(s) 117, 859
HaeIII GGCC 3 cut(s) 497, 579, 831
HgaI GACGC 1 cut(s) 797
Hin1I GRCGYC 2 cut(s) 789, 1099
Hin1II CATG 8 cut(s) 94, 119, 161, 408, 584, 836, 860, 1079
HinfI GANTC 7 cut(s) 4, 77, 153, 423, 902, 970, 1056
HphI GGTGA 3 cut(s) 137, 281, 616
Hpy166II GTNNAC 5 cut(s) 128, 238, 308, 738, 1085
Hpy188I TCNGA 4 cut(s) 428, 515, 718, 803
Hpy188III TCNNGA 6 cut(s) 107, 116, 931, 989, 1033, 1053
Hpy8I GTNNAC 5 cut(s) 128, 238, 308, 738, 1085
HpyAV CCTTC 5 cut(s) 226, 598, 868, 872, 1249
HpyCH4III ACNGT 3 cut(s) 125, 604, 910
HpyCH4IV ACGT 6 cut(s) 59, 486, 940, 1027, 1087, 1099
HpyCH4V TGCA 2 cut(s) 267, 1085
HpyF10VI GCNNNNNNNGC 1 cut(s) 825
HpyF3I CTNAG 4 cut(s) 8, 65, 541, 743
HpySE526I ACGT 6 cut(s) 59, 486, 940, 1027, 1087, 1099
Hsp92I GRCGYC 2 cut(s) 789, 1099
Hsp92II CATG 8 cut(s) 94, 119, 161, 408, 584, 836, 860, 1079
Ksp22I TGATCA 1 cut(s) 112
KspI CCGCGG 1 cut(s) 829
Kzo9I GATC 6 cut(s) 36, 112, 241, 433, 456, 1129
LmnI GCTCC 1 cut(s) 537
LpnPI CCDG 9 cut(s) 6, 33, 147, 188, 334, 374, 396, 823, 1065
LweI GCATC 2 cut(s) 189, 806
MaeI CTAG 1 cut(s) 419
MaeII ACGT 6 cut(s) 59, 486, 940, 1027, 1087, 1099
MaeIII GTNAC 1 cut(s) 604
MalI GATC 6 cut(s) 38, 114, 243, 435, 458, 1131
MbiI CCGCTC 1 cut(s) 566
MboI GATC 6 cut(s) 36, 112, 241, 433, 456, 1129
MfeI CAATTG 1 cut(s) 609
MhlI GDGCHC 3 cut(s) 486, 1069, 1087
MluCI AATT 8 cut(s) 14, 256, 312, 328, 609, 925, 1015, 1242
MlyI GAGTC 4 cut(s) 71, 162, 896, 1065
MmeI TCCRAC 1 cut(s) 685
MseI TTAA 1 cut(s) 980
MslI CAYNNNNRTG 3 cut(s) 105, 1074, 1080
MspA1I CMGCKG 1 cut(s) 828
MspR9I CCNGG 1 cut(s) 21
MunI CAATTG 1 cut(s) 609
MvaI CCWGG 1 cut(s) 21
MvnI CGCG 1 cut(s) 828
MwoI GCNNNNNNNGC 1 cut(s) 825
NdeI CATATG 1 cut(s) 1061
NdeII GATC 6 cut(s) 36, 112, 241, 433, 456, 1129
NlaIII CATG 8 cut(s) 94, 119, 161, 408, 584, 836, 860, 1079
NlaIV GGNNCC 1 cut(s) 691
NmuCI GTSAC 1 cut(s) 604
NspI RCATGY 1 cut(s) 860
PagI TCATGA 1 cut(s) 115
PciI ACATGT 1 cut(s) 856
PfeI GAWTC 3 cut(s) 4, 423, 970
PkrI GCNGC 2 cut(s) 827, 830
Ple19I CGATCG 1 cut(s) 244
PleI GAGTC 4 cut(s) 71, 161, 896, 1064
PmaCI CACGTG 1 cut(s) 487
PmlI CACGTG 1 cut(s) 487
PpsI GAGTC 4 cut(s) 71, 161, 896, 1064
Ppu21I YACGTR 2 cut(s) 487, 941
PpuMI RGGWCCY 1 cut(s) 690
PscI ACATGT 1 cut(s) 856
PshBI ATTAAT 1 cut(s) 980
PsiI TTATAA 1 cut(s) 177
Psp5II RGGWCCY 1 cut(s) 690
Psp6I CCWGG 1 cut(s) 19
PspCI CACGTG 1 cut(s) 487
PspGI CCWGG 1 cut(s) 19
PspN4I GGNNCC 1 cut(s) 691
PspPI GGNCC 1 cut(s) 690
PspPPI RGGWCCY 1 cut(s) 690
PvuI CGATCG 1 cut(s) 244
RsaI GTAC 1 cut(s) 844
RsaNI GTAC 1 cut(s) 843
RseI CAYNNNNRTG 3 cut(s) 105, 1074, 1080
SacII CCGCGG 1 cut(s) 829
SaqAI TTAA 1 cut(s) 980
SatI GCNGC 2 cut(s) 826, 829
Sau3AI GATC 6 cut(s) 36, 112, 241, 433, 456, 1129
Sau96I GGNCC 1 cut(s) 690
ScaI AGTACT 1 cut(s) 844
SchI GAGTC 4 cut(s) 71, 162, 896, 1065
ScrFI CCNGG 1 cut(s) 21
SduI GDGCHC 3 cut(s) 486, 1069, 1087
SfaNI GCATC 2 cut(s) 189, 806
SfcI CTRYAG 1 cut(s) 778
Sfr303I CCGCGG 1 cut(s) 829
SgrBI CCGCGG 1 cut(s) 829
SinI GGWCC 1 cut(s) 690
SmiMI CAYNNNNRTG 3 cut(s) 105, 1074, 1080
SmlI CTYRAG 2 cut(s) 1031, 1235
SmoI CTYRAG 2 cut(s) 1031, 1235
Sse9I AATT 8 cut(s) 14, 256, 312, 328, 609, 925, 1015, 1242
SsiI CCGC 6 cut(s) 558, 564, 670, 826, 828, 1213
SspI AATATT 1 cut(s) 504
SspMI CTAG 1 cut(s) 419
StyD4I CCNGG 1 cut(s) 19
StyI CCWWGG 1 cut(s) 693
TaaI ACNGT 3 cut(s) 125, 604, 910
TaiI ACGT 6 cut(s) 62, 489, 943, 1030, 1090, 1102
TaqI TCGA 4 cut(s) 244, 685, 774, 1093
TasI AATT 8 cut(s) 14, 256, 312, 328, 609, 925, 1015, 1242
TatI WGTACW 1 cut(s) 842
TauI GCSGC 2 cut(s) 828, 831
TfiI GAWTC 3 cut(s) 4, 423, 970
Tru1I TTAA 1 cut(s) 980
Tru9I TTAA 1 cut(s) 980
TscAI CASTG 1 cut(s) 747
TseFI GTSAC 1 cut(s) 604
Tsp45I GTSAC 1 cut(s) 604
TspDTI ATGAA 6 cut(s) 79, 231, 389, 985, 1221, 1268
TspGWI ACGGA 3 cut(s) 330, 376, 907
TspRI CASTG 1 cut(s) 747
VneI GTGCAC 1 cut(s) 1083
VpaK11BI GGWCC 1 cut(s) 690
VspI ATTAAT 1 cut(s) 980
XapI RAATTY 1 cut(s) 925
XceI RCATGY 1 cut(s) 860
XspI CTAG 1 cut(s) 419
ZraI GACGTC 1 cut(s) 1100
ZrmI AGTACT 1 cut(s) 844
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.