Rh3CG097300

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000125
Physical Location & Seq
Forward (+)
7635879 .. 7637997
2119 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG097300.1

Sequence Viewer

Length: 1308 bp
ATGGACCTATTAGAATTGCCCTTGGATATCCTGATCACCATCCTTCTGAGATTGCCGGCCGAGTCACTCTATGGCATTCGATGCGTCTCTAAGACCTTGTCAAAGATAGTTGATGACTTCTTTTTTGTTACACTGCACAAGCGTTTACTCATCACCCCCAACAATGTTGCTCAAGTGCCTCAACTCATGTCTTTTGCTTGGCGGTTTACTCATGAGAGTAGTCCAGTTATAGGGGTCTTGCAACCACTGAAGTACGATGGCAGGGCCTTGACGAAAGGAAAATATGCAATTAATGTCTCCACATCATCAGACTGGAACTACACGCCTGACACCATAGATTTTGTTTTCTGCAACTTGTTTTGCTTTCGAAATAAATATGATCACGGCCTTGGAGTTTGCTTCTTATTCAATCCTAAGGGAGAAGTTCTAAGGCTCCCTAGGAATGAAGTTACCAAGTATGTTAAGTTTTCTCATGTAGACCGTGATTGGTATGGTATGGGATTTGATAATATGACCAACACCCACAAGATTGTTCGTGTTTCCAGAGTTTCTAATGGTAGCGGTAAAGAGAGCTGCCTTATATCCCAAGTTCTTGTATTAGGCACAAGCTCATGGCGAGAGATACCCTCAGTTCCTCCTGGTAATTTAGATTATGCTTTAAGCTTTGTGAAGAATGTATGCGCTCTTGGAGACATGCATTGGTTGATTACTGGTAATTTCATAAGAGAAGGAAGTGAAGGAACATGCCATATAATTTCTTTCGACTTCAAGAAAGAAGAGTTCTATTGGACTCCTCATCCCCTGTTACAAAGCTCGAACAAGCACTTGGACTTCTTCGACTTACACTTGCTTACTCTAAGAGGATCTATGGCCCTGGCGTATACTTCATCATCAGTAGGTCGGACAACGGATATTGAGATATGGGTGTTAAAAGATTATGACAGAAAAGAATGGACGCAAGATTACACCCTAAATTGCAAAATGCTTCATAATTTACTTTGGAACTTTGGATTGAGGGATATTACATGTGGTGAATGGAAGCATGGCATGTTTTTTAAAAGTCATGCATATATGTTCTTTTTGGACCTCAATTGCTTTTCCATAAATCGCATGGCATTCGGGAATGGGTTCTATACTAATGTCTTGAGTTACACTAGCAGCCTGATTTCCTTAAAAGATTATTGCAGTTTGGTTCAATTTGAAACACAGGAAACTGGAAGTTATGCCAATTTGATTGAAGGAGATGAACAAGGCTTTAGTTTATCCGAAAGGCAGACACTGCAAGGATTCGTTTACATGAATAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

435

Amino Acids

50.07

Weight (kDa)

6.67

Isoelectric Point (pI)

37.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 3 - 40 2.9e-07 F-box domain
FBA_3 PF08268 116 - 330 4e-17 F-box associated beta propeller domain
FBA_1 PF07734 151 - 329 5.6e-15 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 477, 881
AciI CCGC 2 cut(s) 202, 561
AclWI GGATC 1 cut(s) 871
AcoI YGGCCR 1 cut(s) 57
AcuI CTGAAG 1 cut(s) 269
AfaI GTAC 1 cut(s) 254
AfiI CCNNNNNNNGG 1 cut(s) 230
AflIII ACRYGT 1 cut(s) 1025
AgsI TTSAA 5 cut(s) 409, 769, 1196, 1202, 1238
AjnI CCWGG 2 cut(s) 637, 873
AjuI GAANNNNNNNTTGG 2 cut(s) 809, 841
AluBI AGCT 4 cut(s) 573, 609, 663, 813
AluI AGCT 4 cut(s) 573, 609, 663, 813
Alw26I GTCTC 3 cut(s) 91, 301, 684
AlwI GGATC 1 cut(s) 871
AlwNI CAGNNNCTG 1 cut(s) 1279
AoxI GGCC 4 cut(s) 57, 264, 385, 870
ApeKI GCWGC 2 cut(s) 573, 1158
ArsI GACNNNNNNTTYG 2 cut(s) 107, 139
AseI ATTAAT 1 cut(s) 291
Asp700I GAANNNNTTC 1 cut(s) 1127
AspA2I CCTAGG 1 cut(s) 437
AspLEI GCGC 1 cut(s) 683
AspS9I GGNCC 4 cut(s) 4, 264, 871, 1084
AsuHPI GGTGA 3 cut(s) 28, 145, 1043
AsuII TTCGAA 1 cut(s) 367
AvaII GGWCC 2 cut(s) 4, 1084
AvrII CCTAGG 1 cut(s) 437
AxyI CCTNAGG 1 cut(s) 414
BbvI GCAGC 2 cut(s) 560, 1170
BccI CCATC 2 cut(s) 47, 251
BceAI ACGGC 1 cut(s) 400
BcgI CGANNNNNNTGC 2 cut(s) 1099, 1133
BciT130I CCWGG 2 cut(s) 639, 875
BclI TGATCA 2 cut(s) 33, 379
BcoDI GTCTC 3 cut(s) 91, 301, 684
BfaI CTAG 2 cut(s) 438, 1155
BisI GCNGC 2 cut(s) 574, 1159
BlnI CCTAGG 1 cut(s) 437
BlsI GCNGC 2 cut(s) 575, 1160
Bme1390I CCNGG 2 cut(s) 639, 875
Bme18I GGWCC 2 cut(s) 4, 1084
BmgT120I GGNCC 4 cut(s) 4, 264, 871, 1084
BmiI GGNNCC 1 cut(s) 434
BmrFI CCNGG 2 cut(s) 639, 875
BmsI GCATC 1 cut(s) 71
BplI GAGNNNNNCTC 2 cut(s) 611, 643
Bpu14I TTCGAA 1 cut(s) 367
BpuEI CTTGAG 2 cut(s) 156, 1165
BsaBI GATNNNNATC 1 cut(s) 38
BsaJI CCNNGG 4 cut(s) 21, 388, 437, 873
Bsc4I CCNNNNNNNGG 1 cut(s) 230
Bse118I RCCGGY 1 cut(s) 55
Bse1I ACTGG 4 cut(s) 224, 317, 715, 1219
Bse21I CCTNAGG 1 cut(s) 414
Bse8I GATNNNNATC 1 cut(s) 38
BseBI CCWGG 2 cut(s) 639, 875
BseDI CCNNGG 4 cut(s) 21, 388, 437, 873
BseGI GGATG 2 cut(s) 39, 796
BseJI GATNNNNATC 1 cut(s) 38
BseLI CCNNNNNNNGG 1 cut(s) 230
BseMII CTCAG 2 cut(s) 38, 642
BseNI ACTGG 4 cut(s) 224, 317, 715, 1219
BseRI GAGGAG 1 cut(s) 783
BseX3I CGGCCG 1 cut(s) 57
BseXI GCAGC 2 cut(s) 560, 1170
BsgI GTGCAG 1 cut(s) 119
Bsh1285I CGRYCG 1 cut(s) 60
BshFI GGCC 4 cut(s) 59, 266, 387, 872
BsiEI CGRYCG 1 cut(s) 60
BsiSI CCGG 1 cut(s) 56
BslI CCNNNNNNNGG 1 cut(s) 230
BsmAI GTCTC 3 cut(s) 91, 301, 684
BsmBI CGTCTC 1 cut(s) 91
BsmI GAATGC 2 cut(s) 75, 1115
BsnI GGCC 4 cut(s) 59, 266, 387, 872
Bsp119I TTCGAA 1 cut(s) 367
Bsp143I GATC 3 cut(s) 33, 379, 863
BspACI CCGC 2 cut(s) 202, 561
BspANI GGCC 4 cut(s) 59, 266, 387, 872
BspCNI CTCAG 2 cut(s) 39, 641
BspHI TCATGA 1 cut(s) 211
BspLI GGNNCC 1 cut(s) 434
BspPI GGATC 1 cut(s) 871
BspT104I TTCGAA 1 cut(s) 367
BsrFI RCCGGY 1 cut(s) 55
BsrI ACTGG 4 cut(s) 224, 317, 715, 1219
BssAI RCCGGY 1 cut(s) 55
BssECI CCNNGG 4 cut(s) 21, 388, 437, 873
BssMI GATC 3 cut(s) 33, 379, 863
BssNAI GTATAC 1 cut(s) 882
BssT1I CCWWGG 3 cut(s) 21, 388, 437
Bst1107I GTATAC 1 cut(s) 882
Bst2UI CCWGG 2 cut(s) 639, 875
Bst4CI ACNGT 1 cut(s) 482
Bst6I CTCTTC 1 cut(s) 771
BstAPI GCANNNNNTGC 2 cut(s) 81, 1279
BstBI TTCGAA 1 cut(s) 367
BstC8I GCNNGC 1 cut(s) 57
BstDEI CTNAG 6 cut(s) 47, 90, 414, 428, 628, 857
BstF5I GGATG 2 cut(s) 39, 796
BstHHI GCGC 1 cut(s) 683
BstKTI GATC 3 cut(s) 36, 382, 866
BstMAI GTCTC 3 cut(s) 91, 301, 684
BstMBI GATC 3 cut(s) 33, 379, 863
BstMCI CGRYCG 1 cut(s) 60
BstMWI GCNNNNNNNGC 2 cut(s) 81, 1279
BstNI CCWGG 2 cut(s) 639, 875
BstNSI RCATGY 4 cut(s) 697, 747, 1029, 1051
BstSCI CCNGG 2 cut(s) 637, 873
BstV1I GCAGC 2 cut(s) 560, 1170
BstX2I RGATCY 1 cut(s) 863
BstYI RGATCY 1 cut(s) 863
BstZ17I GTATAC 1 cut(s) 882
BstZI CGGCCG 1 cut(s) 57
Bsu36I CCTNAGG 1 cut(s) 414
BsuRI GGCC 4 cut(s) 59, 266, 387, 872
BtsCI GGATG 2 cut(s) 39, 796
BtsI GCAGTG 2 cut(s) 131, 1277
BtsIMutI CAGTG 3 cut(s) 131, 245, 1277
Cac8I GCNNGC 1 cut(s) 57
CaiI CAGNNNCTG 1 cut(s) 1279
CciI TCATGA 1 cut(s) 211
CfoI GCGC 1 cut(s) 683
Cfr10I RCCGGY 1 cut(s) 55
Cfr13I GGNCC 4 cut(s) 4, 264, 871, 1084
CseI GACGC 2 cut(s) 73, 964
Csp6I GTAC 1 cut(s) 253
CviQI GTAC 1 cut(s) 253
DdeI CTNAG 6 cut(s) 47, 90, 414, 428, 628, 857
DpnI GATC 3 cut(s) 35, 381, 865
DpnII GATC 3 cut(s) 33, 379, 863
DraI TTTAAA 1 cut(s) 1057
EaeI YGGCCR 1 cut(s) 57
EagI CGGCCG 1 cut(s) 57
Eam1104I CTCTTC 1 cut(s) 771
EarI CTCTTC 1 cut(s) 771
EclXI CGGCCG 1 cut(s) 57
Eco130I CCWWGG 3 cut(s) 21, 388, 437
Eco32I GATATC 1 cut(s) 28
Eco47I GGWCC 2 cut(s) 4, 1084
Eco52I CGGCCG 1 cut(s) 57
Eco57I CTGAAG 1 cut(s) 269
Eco81I CCTNAGG 1 cut(s) 414
EcoO109I RGGNCCY 1 cut(s) 264
EcoRII CCWGG 2 cut(s) 637, 873
EcoRV GATATC 1 cut(s) 28
EcoT14I CCWWGG 3 cut(s) 21, 388, 437
EcoT22I ATGCAT 2 cut(s) 699, 1069
ErhI CCWWGG 3 cut(s) 21, 388, 437
Esp3I CGTCTC 1 cut(s) 91
FbaI TGATCA 2 cut(s) 33, 379
FblI GTMKAC 2 cut(s) 477, 881
Fnu4HI GCNGC 2 cut(s) 574, 1159
FokI GGATG 2 cut(s) 26, 783
Fsp4HI GCNGC 2 cut(s) 574, 1159
FspBI CTAG 2 cut(s) 438, 1155
GlaI GCGC 1 cut(s) 682
GluI GCNGC 2 cut(s) 574, 1159
HaeIII GGCC 4 cut(s) 59, 266, 387, 872
HapII CCGG 1 cut(s) 56
HgaI GACGC 2 cut(s) 73, 964
HhaI GCGC 1 cut(s) 683
Hin6I GCGC 1 cut(s) 681
HinP1I GCGC 1 cut(s) 681
HindIII AAGCTT 1 cut(s) 661
HinfI GANTC 3 cut(s) 62, 790, 1287
HpaII CCGG 1 cut(s) 56
HphI GGTGA 3 cut(s) 28, 145, 1043
Hpy166II GTNNAC 5 cut(s) 146, 207, 478, 882, 1294
Hpy188I TCNGA 4 cut(s) 48, 310, 903, 1267
Hpy188III TCNNGA 6 cut(s) 31, 212, 543, 769, 1120, 1144
Hpy8I GTNNAC 5 cut(s) 146, 207, 478, 882, 1294
HpyAV CCTTC 4 cut(s) 53, 722, 731, 1232
HpyCH4III ACNGT 1 cut(s) 482
HpyCH4V TGCA 9 cut(s) 136, 241, 287, 351, 697, 978, 1067, 1185, 1282
HpyF10VI GCNNNNNNNGC 2 cut(s) 81, 1279
HpyF3I CTNAG 6 cut(s) 47, 90, 414, 428, 628, 857
HspAI GCGC 1 cut(s) 681
KroI GCCGGC 1 cut(s) 55
KroNI GCCGGC 1 cut(s) 57
Ksp22I TGATCA 2 cut(s) 33, 379
Kzo9I GATC 3 cut(s) 33, 379, 863
LmnI GCTCC 1 cut(s) 438
Lsp1109I GCAGC 2 cut(s) 560, 1170
LweI GCATC 1 cut(s) 71
MaeI CTAG 2 cut(s) 438, 1155
MaeIII GTNAC 5 cut(s) 63, 127, 448, 804, 1148
MalI GATC 3 cut(s) 35, 381, 865
MboI GATC 3 cut(s) 33, 379, 863
MboII GAAGA 3 cut(s) 682, 788, 826
MfeI CAATTG 1 cut(s) 1090
MflI RGATCY 1 cut(s) 863
MlyI GAGTC 2 cut(s) 71, 784
MmeI TCCRAC 1 cut(s) 881
MnlI CCTC 7 cut(s) 189, 637, 645, 804, 854, 1008, 1097
Mph1103I ATGCAT 2 cut(s) 699, 1069
MroNI GCCGGC 1 cut(s) 55
MroXI GAANNNNTTC 1 cut(s) 1127
MseI TTAA 6 cut(s) 291, 462, 659, 929, 1056, 1172
MspI CCGG 1 cut(s) 56
MspR9I CCNGG 2 cut(s) 639, 875
MunI CAATTG 1 cut(s) 1090
Mva1269I GAATGC 2 cut(s) 75, 1115
MvaI CCWGG 2 cut(s) 639, 875
MwoI GCNNNNNNNGC 2 cut(s) 81, 1279
NaeI GCCGGC 1 cut(s) 57
NdeII GATC 3 cut(s) 33, 379, 863
NgoMIV GCCGGC 1 cut(s) 55
NlaIV GGNNCC 1 cut(s) 434
NmeAIII GCCGAG 1 cut(s) 85
NmuCI GTSAC 1 cut(s) 63
NsiI ATGCAT 2 cut(s) 699, 1069
NspI RCATGY 4 cut(s) 697, 747, 1029, 1051
NspV TTCGAA 1 cut(s) 367
PagI TCATGA 1 cut(s) 211
PciI ACATGT 1 cut(s) 1025
PctI GAATGC 2 cut(s) 75, 1115
PdiI GCCGGC 1 cut(s) 57
PdmI GAANNNNTTC 1 cut(s) 1127
PfeI GAWTC 1 cut(s) 1287
PflFI GACNNNGTC 1 cut(s) 97
PkrI GCNGC 2 cut(s) 575, 1160
PleI GAGTC 2 cut(s) 70, 784
PpsI GAGTC 2 cut(s) 70, 784
PscI ACATGT 1 cut(s) 1025
PshBI ATTAAT 1 cut(s) 291
Psp6I CCWGG 2 cut(s) 637, 873
PspGI CCWGG 2 cut(s) 637, 873
PspN4I GGNNCC 1 cut(s) 434
PspPI GGNCC 4 cut(s) 4, 264, 871, 1084
PstNI CAGNNNCTG 1 cut(s) 1279
PsuI RGATCY 1 cut(s) 863
PsyI GACNNNGTC 1 cut(s) 97
RsaI GTAC 1 cut(s) 254
RsaNI GTAC 1 cut(s) 253
SaqAI TTAA 6 cut(s) 291, 462, 659, 929, 1056, 1172
SatI GCNGC 2 cut(s) 574, 1159
Sau3AI GATC 3 cut(s) 33, 379, 863
Sau96I GGNCC 4 cut(s) 4, 264, 871, 1084
SchI GAGTC 2 cut(s) 71, 784
ScrFI CCNGG 2 cut(s) 639, 875
SetI ASST 9 cut(s) 9, 98, 575, 611, 665, 815, 901, 1089, 1307
SfaNI GCATC 1 cut(s) 71
SfuI TTCGAA 1 cut(s) 367
SinI GGWCC 2 cut(s) 4, 1084
SmlI CTYRAG 2 cut(s) 171, 1144
SmoI CTYRAG 2 cut(s) 171, 1144
SsiI CCGC 2 cut(s) 202, 561
SspMI CTAG 2 cut(s) 438, 1155
StyD4I CCNGG 2 cut(s) 637, 873
StyI CCWWGG 3 cut(s) 21, 388, 437
TaaI ACNGT 1 cut(s) 482
TaqI TCGA 5 cut(s) 79, 367, 762, 815, 837
TfiI GAWTC 1 cut(s) 1287
Tru1I TTAA 6 cut(s) 291, 462, 659, 929, 1056, 1172
Tru9I TTAA 6 cut(s) 291, 462, 659, 929, 1056, 1172
TscAI CASTG 3 cut(s) 138, 252, 1284
TseFI GTSAC 1 cut(s) 63
TseI GCWGC 2 cut(s) 573, 1158
Tsp45I GTSAC 1 cut(s) 63
TspDTI ATGAA 5 cut(s) 459, 709, 876, 977, 1260
TspGWI ACGGA 1 cut(s) 923
TspRI CASTG 3 cut(s) 138, 252, 1284
Tth111I GACNNNGTC 1 cut(s) 97
VpaK11BI GGWCC 2 cut(s) 4, 1084
VspI ATTAAT 1 cut(s) 291
XceI RCATGY 4 cut(s) 697, 747, 1029, 1051
XcmI CCANNNNNNNNNTGG 1 cut(s) 1108
XmaJI CCTAGG 1 cut(s) 437
XmiI GTMKAC 2 cut(s) 477, 881
XmnI GAANNNNTTC 1 cut(s) 1127
XspI CTAG 2 cut(s) 438, 1155
Zsp2I ATGCAT 2 cut(s) 699, 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.