MD12G1195000.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0000125
Physical Location & Seq
Forward (+)
27629448 .. 27630785
1338 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1195000.v1.1.491

Sequence Viewer

Length: 1338 bp
ATGGAGACGCGGAGTATAAAAAGATTGAGACAAAGGCAAGGCAGCGACAACAAGAAAACAAATTTGATGGACGTCGAAAACGATAACCTCGTCGACATCTTTTCGAAGCTGCCGGCAAAGTCACTTATTCAACTCGGATGCATGTCGAAAACCTTGTCAAACATCGTCAGCTGCCCCTATTTTGTCAAGCAACACATGCATTTTCTGACTGCGACAAACGCCGCTTCTGAAGTGCCTCGGCTTATGGTTGTGGCACAATCAAAGAACAGGTACGCTGGGGAGCTGACGGTGTTGCAATCACTGCAATACGACGGAACTTCTTTGGAAAAGAGCAGGCATACCATTGTCTCAAAGGTTATATTTCGCAGGCAAAATTATTCTTTTGACCTAGAGTTTCTTTTCTGCAACTTGATTTGCTTGAAAGACAGCAATTATGGTTATGGACGCCGGTGCTTGCTTTTGAATCCGTTGAAGGCAGAAGCTGTTATACTCCCAGTTGATAACACCATTCGCCCCGATGTTCCAGCAAATCCAATTTCCAAATCCTATGAATATTGGTATGGGATGGGATTCGATAATGCGAACAACAAGTATAAGATTGTTCGTGTTTTTGGATACAGGTTTGGTTATGATTTTGGGTATACTGGGTACAAATATTTGGTGTCTCATGTCCATGAGCTGGGAACAAGCTCATGGAGGGAGATAGACTCAGTTCCTCCTCGAAAAATAACTGATAAGAAAGTGTCAGCATATGGAGATATGCATTGGTTAACAACGCACTCAAGAAGAGTTCGAGAAGATATCTTCTTCTACATAAGCATATTAACCTTCGACTTCAATAAGGAGAAGTTTTGTTGGAACATTCCTGTTCCCCCCTCAAGCAGAGGGCCGCGTAACTTCCCTCCTGTCGAGCGCTTTCAGTTGATCAATCTGAAGGGATCTTTGTCCCTCATTGACGCTTCATCAGACAAGTACCTTGAGATTTGGATGTTGAACAATTATGATGAGAAAGAGTGGATTTTCAGCTACAGAATTGATGGCAGTGCGTTTATAGCAGCATGCCCGTACAGAAGTTTTAGGTTTTGGACGTGCGGTGAATGGGAGCACGGCATATTTTTTAAGAAATCCGATTGCACCACACTTGATCTAATCTTTTTGGATCTAAGAAGTGCTTCCATCAACTGTGTAGAATGTCCGGTATCAAAAAGGGGATTGCATACGAGCGTACTGAGTTATACCGGTGGTTTGATTTCCCTTAGAAGTTATGGGAATCTGGTGGAACCGAAAACAGGCTCCCGGGATCTTAATGCATTTTCAAACCTGTGGAAGTTTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

446

Amino Acids

51.45

Weight (kDa)

9.1

Isoelectric Point (pI)

46.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 81 - 341 7.7e-18 F-box associated beta propeller domain
FBA_1 PF07734 148 - 340 2e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 75
AccB7I CCANNNNNTGG 1 cut(s) 679
AccI GTMKAC 2 cut(s) 93, 641
AccII CGCG 2 cut(s) 10, 892
AciI CCGC 4 cut(s) 10, 222, 890, 1092
AclWI GGATC 3 cut(s) 946, 1167, 1308
AcsI RAATTY 1 cut(s) 61
AcuI CTGAAG 2 cut(s) 249, 953
AcyI GRCGYC 2 cut(s) 72, 445
AfaI GTAC 5 cut(s) 272, 650, 974, 1067, 1227
AfeI AGCGCT 1 cut(s) 914
AfiI CCNNNNNNNGG 2 cut(s) 679, 1289
AgeI ACCGGT 1 cut(s) 1238
AgsI TTSAA 7 cut(s) 131, 421, 463, 472, 838, 994, 1317
AjiI CACGTC 1 cut(s) 1089
AluBI AGCT 7 cut(s) 109, 171, 283, 482, 679, 690, 1026
AluI AGCT 7 cut(s) 109, 171, 283, 482, 679, 690, 1026
Alw21I GWGCWC 1 cut(s) 1107
Alw26I GTCTC 3 cut(s) 22, 352, 669
AlwI GGATC 3 cut(s) 946, 1167, 1308
AlwNI CAGNNNCTG 1 cut(s) 482
Ama87I CYCGRG 1 cut(s) 1296
Aor51HI AGCGCT 1 cut(s) 914
AoxI GGCC 1 cut(s) 887
ApeKI GCWGC 4 cut(s) 42, 109, 171, 1055
ApoI RAATTY 1 cut(s) 61
ArsI GACNNNNNNTTYG 2 cut(s) 140, 172
AsiGI ACCGGT 1 cut(s) 1238
Asp700I GAANNNNTTC 1 cut(s) 1171
AspLEI GCGC 1 cut(s) 915
AspS9I GGNCC 1 cut(s) 887
AsuC2I CCSGG 2 cut(s) 1297, 1298
AsuHPI GGTGA 1 cut(s) 1106
AsuII TTCGAA 1 cut(s) 104
AvaI CYCGRG 1 cut(s) 1296
BarI GAAGNNNNNNTAC 2 cut(s) 471, 503
Bbv12I GWGCWC 1 cut(s) 1107
BbvI GCAGC 4 cut(s) 54, 96, 158, 1067
BccI CCATC 4 cut(s) 61, 559, 1031, 1184
BceAI ACGGC 1 cut(s) 1123
BciVI GTATCC 1 cut(s) 608
BclI TGATCA 1 cut(s) 924
BcnI CCSGG 2 cut(s) 1297, 1298
BcoDI GTCTC 3 cut(s) 22, 352, 669
BfaI CTAG 1 cut(s) 389
BfmI CTRYAG 1 cut(s) 1027
BfoI RGCGCY 1 cut(s) 916
BfuI GTATCC 1 cut(s) 608
BisI GCNGC 6 cut(s) 43, 110, 172, 222, 890, 1056
BlsI GCNGC 6 cut(s) 44, 111, 173, 223, 891, 1057
Bme1390I CCNGG 2 cut(s) 1297, 1298
BmeT110I CYCGRG 1 cut(s) 1296
BmgBI CACGTC 1 cut(s) 1089
BmgT120I GGNCC 1 cut(s) 887
BmiI GGNNCC 2 cut(s) 1281, 1294
BmrFI CCNGG 2 cut(s) 1297, 1298
BmrI ACTGGG 2 cut(s) 488, 654
BmsI GCATC 1 cut(s) 128
BmuI ACTGGG 2 cut(s) 488, 654
BplI GAGNNNNNCTC 2 cut(s) 692, 724
Bpu14I TTCGAA 1 cut(s) 104
BpuEI CTTGAG 3 cut(s) 766, 862, 998
BpuMI CCSGG 2 cut(s) 1297, 1298
BsaHI GRCGYC 2 cut(s) 72, 445
BsaJI CCNNGG 2 cut(s) 236, 1296
BsaWI WCCGGW 2 cut(s) 1195, 1238
Bsc4I CCNNNNNNNGG 2 cut(s) 679, 1289
Bse118I RCCGGY 3 cut(s) 112, 447, 1238
Bse1I ACTGG 2 cut(s) 494, 649
BseDI CCNNGG 2 cut(s) 236, 1296
BseGI GGATG 3 cut(s) 143, 570, 993
BseLI CCNNNNNNNGG 2 cut(s) 679, 1289
BseMII CTCAG 2 cut(s) 723, 1220
BseNI ACTGG 2 cut(s) 494, 649
BseRI GAGGAG 1 cut(s) 708
BseXI GCAGC 4 cut(s) 54, 96, 158, 1067
BseYI CCCAGC 2 cut(s) 275, 679
Bsh1236I CGCG 2 cut(s) 10, 892
BshFI GGCC 1 cut(s) 889
BshTI ACCGGT 1 cut(s) 1238
BsiHKAI GWGCWC 1 cut(s) 1107
BsiHKCI CYCGRG 1 cut(s) 1296
BsiSI CCGG 5 cut(s) 113, 448, 1196, 1239, 1297
BslFI GGGAC 1 cut(s) 931
BslI CCNNNNNNNGG 2 cut(s) 679, 1289
BsmAI GTCTC 3 cut(s) 22, 352, 669
BsmFI GGGAC 1 cut(s) 931
BsnI GGCC 1 cut(s) 889
BsoBI CYCGRG 1 cut(s) 1296
Bsp119I TTCGAA 1 cut(s) 104
Bsp1286I GDGCHC 1 cut(s) 1107
Bsp143I GATC 5 cut(s) 924, 938, 1144, 1159, 1300
BspACI CCGC 4 cut(s) 10, 222, 890, 1092
BspANI GGCC 1 cut(s) 889
BspCNI CTCAG 2 cut(s) 722, 1221
BspFNI CGCG 2 cut(s) 10, 892
BspLI GGNNCC 2 cut(s) 1281, 1294
BspPI GGATC 3 cut(s) 946, 1167, 1308
BspT104I TTCGAA 1 cut(s) 104
BsrFI RCCGGY 3 cut(s) 112, 447, 1238
BsrI ACTGG 2 cut(s) 494, 649
BssAI RCCGGY 3 cut(s) 112, 447, 1238
BssECI CCNNGG 2 cut(s) 236, 1296
BssMI GATC 5 cut(s) 924, 938, 1144, 1159, 1300
BssNAI GTATAC 1 cut(s) 642
BssNI GRCGYC 2 cut(s) 72, 445
Bst1107I GTATAC 1 cut(s) 642
Bst4CI ACNGT 2 cut(s) 289, 1184
Bst6I CTCTTC 1 cut(s) 781
BstACI GRCGYC 2 cut(s) 72, 445
BstAPI GCANNNNNTGC 2 cut(s) 196, 301
BstBI TTCGAA 1 cut(s) 104
BstC8I GCNNGC 5 cut(s) 114, 335, 368, 455, 1060
BstDEI CTNAG 4 cut(s) 709, 1163, 1229, 1256
BstF5I GGATG 3 cut(s) 143, 570, 993
BstFNI CGCG 2 cut(s) 10, 892
BstH2I RGCGCY 1 cut(s) 916
BstHHI GCGC 1 cut(s) 915
BstKTI GATC 5 cut(s) 927, 941, 1147, 1162, 1303
BstMAI GTCTC 3 cut(s) 22, 352, 669
BstMBI GATC 5 cut(s) 924, 938, 1144, 1159, 1300
BstMWI GCNNNNNNNGC 4 cut(s) 196, 218, 301, 1052
BstNSI RCATGY 3 cut(s) 145, 199, 1062
BstSCI CCNGG 2 cut(s) 1295, 1296
BstSFI CTRYAG 1 cut(s) 1027
BstUI CGCG 2 cut(s) 10, 892
BstV1I GCAGC 4 cut(s) 54, 96, 158, 1067
BstX2I RGATCY 3 cut(s) 938, 1159, 1300
BstYI RGATCY 3 cut(s) 938, 1159, 1300
BstZ17I GTATAC 1 cut(s) 642
BsuI GTATCC 1 cut(s) 608
BsuRI GGCC 1 cut(s) 889
BtrI CACGTC 1 cut(s) 1089
BtsCI GGATG 3 cut(s) 143, 570, 993
BtsI GCAGTG 2 cut(s) 299, 1048
BtsIMutI CAGTG 2 cut(s) 299, 1048
Cac8I GCNNGC 5 cut(s) 114, 335, 368, 455, 1060
CaiI CAGNNNCTG 1 cut(s) 482
CfoI GCGC 1 cut(s) 915
Cfr10I RCCGGY 3 cut(s) 112, 447, 1238
Cfr13I GGNCC 1 cut(s) 887
Cfr9I CCCGGG 1 cut(s) 1296
CseI GACGC 3 cut(s) 16, 453, 965
Csp6I GTAC 5 cut(s) 271, 649, 973, 1066, 1226
CspAI ACCGGT 1 cut(s) 1238
CviAII CATG 6 cut(s) 142, 196, 668, 674, 693, 1059
CviQI GTAC 5 cut(s) 271, 649, 973, 1066, 1226
DdeI CTNAG 4 cut(s) 709, 1163, 1229, 1256
DpnI GATC 5 cut(s) 926, 940, 1146, 1161, 1302
DpnII GATC 5 cut(s) 924, 938, 1144, 1159, 1300
Eam1104I CTCTTC 1 cut(s) 781
EarI CTCTTC 1 cut(s) 781
Eco32I GATATC 1 cut(s) 802
Eco47III AGCGCT 1 cut(s) 914
Eco57I CTGAAG 2 cut(s) 249, 953
Eco88I CYCGRG 1 cut(s) 1296
EcoRV GATATC 1 cut(s) 802
EcoT22I ATGCAT 4 cut(s) 143, 201, 765, 1312
FaeI CATG 6 cut(s) 145, 199, 671, 677, 696, 1062
FalI AAGNNNNNCTT 2 cut(s) 1156, 1188
FaqI GGGAC 1 cut(s) 931
FatI CATG 6 cut(s) 141, 195, 667, 673, 692, 1058
FauNDI CATATG 1 cut(s) 751
FbaI TGATCA 1 cut(s) 924
FblI GTMKAC 2 cut(s) 93, 641
Fnu4HI GCNGC 6 cut(s) 43, 110, 172, 222, 890, 1056
FokI GGATG 3 cut(s) 150, 577, 1000
Fsp4HI GCNGC 6 cut(s) 43, 110, 172, 222, 890, 1056
FspBI CTAG 1 cut(s) 389
GlaI GCGC 1 cut(s) 914
GluI GCNGC 6 cut(s) 43, 110, 172, 222, 890, 1056
GsaI CCCAGC 2 cut(s) 279, 683
HaeII RGCGCY 1 cut(s) 916
HaeIII GGCC 1 cut(s) 889
HapII CCGG 5 cut(s) 113, 448, 1196, 1239, 1297
HgaI GACGC 3 cut(s) 16, 453, 965
HhaI GCGC 1 cut(s) 915
Hin1I GRCGYC 2 cut(s) 72, 445
Hin1II CATG 6 cut(s) 145, 199, 671, 677, 696, 1062
Hin6I GCGC 1 cut(s) 913
HinP1I GCGC 1 cut(s) 913
HincII GTYRAC 2 cut(s) 94, 771
HindII GTYRAC 2 cut(s) 94, 771
HinfI GANTC 4 cut(s) 463, 570, 707, 1270
HpaI GTTAAC 1 cut(s) 771
HpaII CCGG 5 cut(s) 113, 448, 1196, 1239, 1297
HphI GGTGA 1 cut(s) 1106
Hpy166II GTNNAC 3 cut(s) 94, 642, 771
Hpy188I TCNGA 6 cut(s) 137, 207, 229, 933, 967, 1129
Hpy188III TCNNGA 2 cut(s) 783, 794
Hpy8I GTNNAC 3 cut(s) 94, 642, 771
Hpy99I CGWCG 3 cut(s) 77, 95, 314
HpyAV CCTTC 3 cut(s) 466, 838, 928
HpyCH4III ACNGT 2 cut(s) 289, 1184
HpyCH4IV ACGT 2 cut(s) 72, 1088
HpyCH4V TGCA 9 cut(s) 141, 199, 295, 304, 405, 763, 1134, 1216, 1310
HpyF10VI GCNNNNNNNGC 4 cut(s) 196, 218, 301, 1052
HpyF3I CTNAG 4 cut(s) 709, 1163, 1229, 1256
HpySE526I ACGT 2 cut(s) 72, 1088
Hsp92I GRCGYC 2 cut(s) 72, 445
Hsp92II CATG 6 cut(s) 145, 199, 671, 677, 696, 1062
HspAI GCGC 1 cut(s) 913
KroI GCCGGC 1 cut(s) 112
KroNI GCCGGC 1 cut(s) 114
Ksp22I TGATCA 1 cut(s) 924
KspAI GTTAAC 1 cut(s) 771
Kzo9I GATC 5 cut(s) 924, 938, 1144, 1159, 1300
LmnI GCTCC 3 cut(s) 280, 1102, 1298
Lsp1109I GCAGC 4 cut(s) 54, 96, 158, 1067
LweI GCATC 1 cut(s) 128
MaeI CTAG 1 cut(s) 389
MaeII ACGT 2 cut(s) 72, 1088
MaeIII GTNAC 2 cut(s) 120, 893
MalI GATC 5 cut(s) 926, 940, 1146, 1161, 1302
MboI GATC 5 cut(s) 924, 938, 1144, 1159, 1300
MboII GAAGA 4 cut(s) 796, 798, 799, 809
MflI RGATCY 3 cut(s) 938, 1159, 1300
MhlI GDGCHC 1 cut(s) 1107
MluCI AATT 6 cut(s) 61, 373, 430, 534, 997, 1032
MlyI GAGTC 1 cut(s) 701
MmeI TCCRAC 1 cut(s) 836
MnlI CCTC 9 cut(s) 98, 246, 690, 726, 729, 878, 886, 912, 959
Mph1103I ATGCAT 4 cut(s) 143, 201, 765, 1312
MroNI GCCGGC 1 cut(s) 112
MroXI GAANNNNTTC 1 cut(s) 1171
MseI TTAA 4 cut(s) 770, 824, 1119, 1305
MslI CAYNNNNRTG 1 cut(s) 672
MspA1I CMGCKG 1 cut(s) 171
MspI CCGG 5 cut(s) 113, 448, 1196, 1239, 1297
MspR9I CCNGG 2 cut(s) 1297, 1298
MvnI CGCG 2 cut(s) 10, 892
MwoI GCNNNNNNNGC 4 cut(s) 196, 218, 301, 1052
NaeI GCCGGC 1 cut(s) 114
NciI CCSGG 2 cut(s) 1297, 1298
NdeI CATATG 1 cut(s) 751
NdeII GATC 5 cut(s) 924, 938, 1144, 1159, 1300
NgoMIV GCCGGC 1 cut(s) 112
NlaIII CATG 6 cut(s) 145, 199, 671, 677, 696, 1062
NlaIV GGNNCC 2 cut(s) 1281, 1294
NmeAIII GCCGAG 1 cut(s) 217
NmuCI GTSAC 1 cut(s) 120
NsiI ATGCAT 4 cut(s) 143, 201, 765, 1312
NspI RCATGY 3 cut(s) 145, 199, 1062
NspV TTCGAA 1 cut(s) 104
PaeI GCATGC 1 cut(s) 1062
PcsI WCGNNNNNNNCGW 2 cut(s) 78, 87
PdiI GCCGGC 1 cut(s) 114
PdmI GAANNNNTTC 1 cut(s) 1171
PfeI GAWTC 3 cut(s) 463, 570, 1270
PflMI CCANNNNNTGG 1 cut(s) 679
PinAI ACCGGT 1 cut(s) 1238
PkrI GCNGC 6 cut(s) 44, 111, 173, 223, 891, 1057
PleI GAGTC 1 cut(s) 701
PpsI GAGTC 1 cut(s) 701
PspFI CCCAGC 2 cut(s) 275, 679
PspN4I GGNNCC 2 cut(s) 1281, 1294
PspPI GGNCC 1 cut(s) 887
PstNI CAGNNNCTG 1 cut(s) 482
PsuI RGATCY 3 cut(s) 938, 1159, 1300
PvuII CAGCTG 1 cut(s) 171
RsaI GTAC 5 cut(s) 272, 650, 974, 1067, 1227
RsaNI GTAC 5 cut(s) 271, 649, 973, 1066, 1226
RseI CAYNNNNRTG 1 cut(s) 672
SalI GTCGAC 1 cut(s) 92
SaqAI TTAA 4 cut(s) 770, 824, 1119, 1305
SatI GCNGC 6 cut(s) 43, 110, 172, 222, 890, 1056
Sau3AI GATC 5 cut(s) 924, 938, 1144, 1159, 1300
Sau96I GGNCC 1 cut(s) 887
SchI GAGTC 1 cut(s) 701
ScrFI CCNGG 2 cut(s) 1297, 1298
SduI GDGCHC 1 cut(s) 1107
SfaNI GCATC 1 cut(s) 128
SfcI CTRYAG 1 cut(s) 1027
SfuI TTCGAA 1 cut(s) 104
SgrAI CRCCGGYG 1 cut(s) 447
SmaI CCCGGG 1 cut(s) 1298
SmiMI CAYNNNNRTG 1 cut(s) 672
SmlI CTYRAG 3 cut(s) 781, 877, 977
SmoI CTYRAG 3 cut(s) 781, 877, 977
SphI GCATGC 1 cut(s) 1062
Sse9I AATT 6 cut(s) 61, 373, 430, 534, 997, 1032
SsiI CCGC 4 cut(s) 10, 222, 890, 1092
SspI AATATT 2 cut(s) 554, 656
SspMI CTAG 1 cut(s) 389
StyD4I CCNGG 2 cut(s) 1295, 1296
TaaI ACNGT 2 cut(s) 289, 1184
TaiI ACGT 2 cut(s) 75, 1091
TaqI TCGA 9 cut(s) 75, 93, 104, 146, 573, 721, 793, 831, 909
TasI AATT 6 cut(s) 61, 373, 430, 534, 997, 1032
TauI GCSGC 2 cut(s) 224, 892
TfiI GAWTC 3 cut(s) 463, 570, 1270
Tru1I TTAA 4 cut(s) 770, 824, 1119, 1305
Tru9I TTAA 4 cut(s) 770, 824, 1119, 1305
TscAI CASTG 2 cut(s) 306, 1048
TseFI GTSAC 1 cut(s) 120
TseI GCWGC 4 cut(s) 42, 109, 171, 1055
Tsp45I GTSAC 1 cut(s) 120
TspDTI ATGAA 2 cut(s) 564, 951
TspGWI ACGGA 2 cut(s) 327, 456
TspMI CCCGGG 1 cut(s) 1296
TspRI CASTG 2 cut(s) 306, 1048
Van91I CCANNNNNTGG 1 cut(s) 679
XapI RAATTY 1 cut(s) 61
XceI RCATGY 3 cut(s) 145, 199, 1062
XmaI CCCGGG 1 cut(s) 1296
XmiI GTMKAC 2 cut(s) 93, 641
XmnI GAANNNNTTC 1 cut(s) 1171
XspI CTAG 1 cut(s) 389
ZraI GACGTC 1 cut(s) 73
Zsp2I ATGCAT 4 cut(s) 143, 201, 765, 1312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.