Prupe.3G238400_v2.0.a1

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000125
Physical Location & Seq
Reverse (-)
23327777 .. 23329162
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G238400.1

Sequence Viewer

Length: 1386 bp
ATGGAGGAGGCATCGATGCCGCTGAGGAGCAAGAAGAGAATGATGAAGCAATTGCAATGCAGCGAGAGAACAACGCAGTTGGTGGAGCTCCCATTGGATATACTCCTGAACATCCTTTCGAGGCTGCCCACAAGATCACTGTTTTCTTTGCTTTGTGTCTCTAAGACCTTGCGCAGCTTAATCGACTGCCCATCTTTTGCTCACGAGCATTCACAATATATTGCTACCACCAATTATGAAGATTTGGACCCGTCTCACGTTATGGTTCTTACCAACTCCCAATTAATCACCTTGCGAGCTTTAAATCCATTGTCGCCCTTTAGCGAATTTGCATTCGACATTTCCAACTCCCTTAGAAACGGATTCAATCTAAAGCTTGTTTCGTACGGCTTGCTTTTGTTTAACAAGAAAGAGTCAACAACAAATGATCAAGCCCTACTCCTCCTAGTCAATCCTCTCATGGGAGAAGTTCTAAACCTCCCACCACCACCAACCACCATTTTCTATGAAGCCCTGCCGCCACGCTGGAACTATGAGTTGTATGGTATGGGATACGATGCCATGACTAGCAGCCACAAGATTGTTCGTCTTTCTAGACCCGGCCCAAAACACGACCTGGTGGCCCAAATTTATGAGCTGGGCACAGGCTCCTCATCGTCATGGAGACAAATATCCTCAGTTCCTCCACCTTCTTGTTGTCTAAGCAGCAAAAACTGTGTGTCTGCATATGGAAACATGCACTGGCTAGTTAATGGTTTCTCTTCTGATCTTGAATTCAGAATACTTTCTTTTGACTTCAAAAGGGAAGAGTTCGAATGGACTCCTCATACCAACTTGCCAGACTTCGGTAAGCGTTCTGTTCTTCACCTGATTAATTTCAGAGGACGTCTCGCCATTGTTGATGTTACGGCAATTTCATCACCTAAAAACAGTCATCACCATGACCAAATTGAGATATGGGTGATGAAAAGTTACAAAAACTTCACGTGGGAAAAAAAGTACGCAGTAGAAATCGATCTTCATCCTTGTTGCATGAAATCATGGGAGACTCCTTTTCGTTTCCATGGTGTTGGGCCTGGTTCTGTAGGTGCTTGGGAACATGGCATCTTTCTCAGAGATATTACTTCGACAAAATCTAAAAATATGGTGGTTTTTTTGGATGTGGATAGTGGCGGCATCAGAGCCGTACAAGTTGGATCATCTTCAATGAGCGATTGTGATGATCTTATGCCCATCAATGTGTTCAGTTATACCGGAGGCTATATTTCTCTAAGAAAATATGGTGATTTGATGGAAGCAGAGACAGGGGAGAGAAATTTCTTCTCTGTGGGGAAGATGATGCAGAGGTCAATGTTGACAAGGTATTGTTTTGAAGTACGTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

462

Amino Acids

52.39

Weight (kDa)

7.61

Isoelectric Point (pI)

42.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 889
Acc16I TGCGCA 1 cut(s) 173
AciI CCGC 3 cut(s) 20, 518, 1173
AclWI GGATC 1 cut(s) 1204
AcsI RAATTY 4 cut(s) 326, 627, 773, 1315
AcvI CACGTG 1 cut(s) 987
AcyI GRCGYC 1 cut(s) 886
AfaI GTAC 4 cut(s) 386, 1001, 1188, 1377
AfiI CCNNNNNNNGG 2 cut(s) 461, 845
AflIII ACRYGT 1 cut(s) 1378
AgsI TTSAA 5 cut(s) 367, 773, 799, 1206, 1373
AjnI CCWGG 2 cut(s) 615, 1075
AluBI AGCT 5 cut(s) 88, 177, 299, 376, 637
AluI AGCT 5 cut(s) 88, 177, 299, 376, 637
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 6 cut(s) 163, 258, 658, 893, 1040, 1295
AlwI GGATC 1 cut(s) 1204
AoxI GGCC 3 cut(s) 601, 621, 1073
ApeKI GCWGC 5 cut(s) 60, 124, 174, 570, 705
ApoI RAATTY 4 cut(s) 326, 627, 773, 1315
AseI ATTAAT 2 cut(s) 284, 873
Asp700I GAANNNNTTC 1 cut(s) 784
AspLEI GCGC 1 cut(s) 174
AspS9I GGNCC 4 cut(s) 247, 602, 622, 1073
AsuC2I CCSGG 1 cut(s) 600
AsuHPI GGTGA 6 cut(s) 280, 857, 912, 929, 973, 1295
AsuII TTCGAA 1 cut(s) 813
AvaII GGWCC 1 cut(s) 247
BaeGI GKGCMC 1 cut(s) 644
BanII GRGCYC 1 cut(s) 90
BauI CACGAG 1 cut(s) 203
BbrPI CACGTG 1 cut(s) 987
Bbv12I GWGCWC 1 cut(s) 90
BbvCI CCTCAGC 1 cut(s) 23
BbvI GCAGC 5 cut(s) 72, 111, 186, 582, 717
BccI CCATC 3 cut(s) 199, 1241, 1285
BceAI ACGGC 3 cut(s) 403, 924, 1169
BcgI CGANNNNNNTGC 2 cut(s) 163, 197
BciT130I CCWGG 2 cut(s) 617, 1077
BciVI GTATCC 1 cut(s) 545
BclI TGATCA 1 cut(s) 427
BcnI CCSGG 1 cut(s) 600
BcoDI GTCTC 6 cut(s) 163, 258, 658, 893, 1040, 1295
BfaI CTAG 4 cut(s) 446, 567, 594, 746
BfmI CTRYAG 1 cut(s) 1083
BfuI GTATCC 1 cut(s) 545
BisI GCNGC 8 cut(s) 20, 61, 125, 175, 518, 571, 706, 1174
BlsI GCNGC 8 cut(s) 21, 62, 126, 176, 519, 572, 707, 1175
Bme1390I CCNGG 3 cut(s) 600, 617, 1077
Bme18I GGWCC 1 cut(s) 247
BmgT120I GGNCC 4 cut(s) 247, 602, 622, 1073
BmiI GGNNCC 2 cut(s) 249, 649
BmrFI CCNGG 3 cut(s) 600, 617, 1077
BmsI GCATC 6 cut(s) 6, 20, 547, 1113, 1185, 1329
BplI GAGNNNNNCTC 2 cut(s) 873, 905
Bpu10I CCTNAGC 1 cut(s) 23
Bpu14I TTCGAA 1 cut(s) 813
BpuMI CCSGG 1 cut(s) 600
Bsa29I ATCGAT 2 cut(s) 14, 1014
BsaAI YACGTR 2 cut(s) 987, 1379
BsaBI GATNNNNATC 1 cut(s) 1020
BsaHI GRCGYC 1 cut(s) 886
BsaJI CCNNGG 1 cut(s) 1063
BsaWI WCCGGW 1 cut(s) 1253
Bsc4I CCNNNNNNNGG 2 cut(s) 461, 845
Bse1I ACTGG 1 cut(s) 746
Bse3DI GCAATG 1 cut(s) 62
Bse8I GATNNNNATC 1 cut(s) 1020
BseBI CCWGG 2 cut(s) 617, 1077
BseCI ATCGAT 2 cut(s) 14, 1014
BseDI CCNNGG 1 cut(s) 1063
BseGI GGATG 3 cut(s) 111, 1021, 1165
BseJI GATNNNNATC 1 cut(s) 1020
BseLI CCNNNNNNNGG 2 cut(s) 461, 845
BseMI GCAATG 1 cut(s) 62
BseMII CTCAG 3 cut(s) 14, 690, 1126
BseNI ACTGG 1 cut(s) 746
BseRI GAGGAG 5 cut(s) 20, 40, 431, 640, 813
BseSI GKGCMC 1 cut(s) 644
BseXI GCAGC 5 cut(s) 72, 111, 186, 582, 717
BseYI CCCAGC 1 cut(s) 637
BshFI GGCC 3 cut(s) 603, 623, 1075
BshVI ATCGAT 2 cut(s) 14, 1014
BsiHKAI GWGCWC 1 cut(s) 90
BsiSI CCGG 2 cut(s) 600, 1254
BsiWI CGTACG 1 cut(s) 384
BslI CCNNNNNNNGG 2 cut(s) 461, 845
BsmAI GTCTC 6 cut(s) 163, 258, 658, 893, 1040, 1295
BsmBI CGTCTC 2 cut(s) 258, 893
BsmI GAATGC 2 cut(s) 208, 332
BsnI GGCC 3 cut(s) 603, 623, 1075
Bsp119I TTCGAA 1 cut(s) 813
Bsp1286I GDGCHC 2 cut(s) 90, 644
Bsp143I GATC 6 cut(s) 134, 427, 766, 1015, 1196, 1222
Bsp19I CCATGG 1 cut(s) 1063
BspACI CCGC 3 cut(s) 20, 518, 1173
BspANI GGCC 3 cut(s) 603, 623, 1075
BspCNI CTCAG 3 cut(s) 15, 689, 1125
BspDI ATCGAT 2 cut(s) 14, 1014
BspLI GGNNCC 2 cut(s) 249, 649
BspPI GGATC 1 cut(s) 1204
BspT104I TTCGAA 1 cut(s) 813
BsrDI GCAATG 1 cut(s) 62
BsrI ACTGG 1 cut(s) 746
BssECI CCNNGG 1 cut(s) 1063
BssMI GATC 6 cut(s) 134, 427, 766, 1015, 1196, 1222
BssNI GRCGYC 1 cut(s) 886
BssSI CACGAG 1 cut(s) 203
BssT1I CCWWGG 1 cut(s) 1063
Bst2BI CACGAG 1 cut(s) 203
Bst2UI CCWGG 2 cut(s) 617, 1077
Bst4CI ACNGT 3 cut(s) 141, 716, 932
Bst6I CTCTTC 3 cut(s) 29, 766, 801
BstACI GRCGYC 1 cut(s) 886
BstBAI YACGTR 2 cut(s) 987, 1379
BstBI TTCGAA 1 cut(s) 813
BstC8I GCNNGC 2 cut(s) 297, 392
BstDEI CTNAG 7 cut(s) 23, 162, 353, 676, 701, 1112, 1271
BstDSI CCRYGG 1 cut(s) 1063
BstF5I GGATG 3 cut(s) 111, 1021, 1165
BstHHI GCGC 1 cut(s) 174
BstKTI GATC 6 cut(s) 137, 430, 769, 1018, 1199, 1225
BstMAI GTCTC 6 cut(s) 163, 258, 658, 893, 1040, 1295
BstMBI GATC 6 cut(s) 134, 427, 766, 1015, 1196, 1222
BstNI CCWGG 2 cut(s) 617, 1077
BstNSI RCATGY 1 cut(s) 739
BstSCI CCNGG 3 cut(s) 598, 615, 1075
BstSFI CTRYAG 1 cut(s) 1083
BstSLI GKGCMC 1 cut(s) 644
BstV1I GCAGC 5 cut(s) 72, 111, 186, 582, 717
BstXI CCANNNNNNTGG 1 cut(s) 1070
Bsu15I ATCGAT 2 cut(s) 14, 1014
BsuI GTATCC 1 cut(s) 545
BsuRI GGCC 3 cut(s) 603, 623, 1075
BsuTUI ATCGAT 2 cut(s) 14, 1014
BtgI CCRYGG 1 cut(s) 1063
BtsCI GGATG 3 cut(s) 111, 1021, 1165
BtsIMutI CAGTG 2 cut(s) 137, 739
Cac8I GCNNGC 2 cut(s) 297, 392
CfoI GCGC 1 cut(s) 174
Cfr13I GGNCC 4 cut(s) 247, 602, 622, 1073
ClaI ATCGAT 2 cut(s) 14, 1014
CsiI ACCWGGT 1 cut(s) 615
Csp6I GTAC 4 cut(s) 385, 1000, 1187, 1376
CviAII CATG 9 cut(s) 460, 562, 660, 736, 941, 1033, 1041, 1064, 1100
CviQI GTAC 4 cut(s) 385, 1000, 1187, 1376
DdeI CTNAG 7 cut(s) 23, 162, 353, 676, 701, 1112, 1271
DpnI GATC 6 cut(s) 136, 429, 768, 1017, 1198, 1224
DpnII GATC 6 cut(s) 134, 427, 766, 1015, 1196, 1222
DraI TTTAAA 1 cut(s) 303
Eam1104I CTCTTC 3 cut(s) 29, 766, 801
EarI CTCTTC 3 cut(s) 29, 766, 801
Ecl136II GAGCTC 1 cut(s) 88
Eco130I CCWWGG 1 cut(s) 1063
Eco24I GRGCYC 1 cut(s) 90
Eco47I GGWCC 1 cut(s) 247
Eco53kI GAGCTC 1 cut(s) 88
Eco72I CACGTG 1 cut(s) 987
EcoICRI GAGCTC 1 cut(s) 88
EcoRI GAATTC 1 cut(s) 773
EcoRII CCWGG 2 cut(s) 615, 1075
EcoT14I CCWWGG 1 cut(s) 1063
EcoT38I GRGCYC 1 cut(s) 90
ErhI CCWWGG 1 cut(s) 1063
Esp3I CGTCTC 2 cut(s) 258, 893
FaeI CATG 9 cut(s) 463, 565, 663, 739, 944, 1036, 1044, 1067, 1103
FatI CATG 9 cut(s) 459, 561, 659, 735, 940, 1032, 1040, 1063, 1099
FauNDI CATATG 1 cut(s) 727
FbaI TGATCA 1 cut(s) 427
Fnu4HI GCNGC 8 cut(s) 20, 61, 125, 175, 518, 571, 706, 1174
FokI GGATG 3 cut(s) 98, 1008, 1172
FriOI GRGCYC 1 cut(s) 90
Fsp4HI GCNGC 8 cut(s) 20, 61, 125, 175, 518, 571, 706, 1174
FspBI CTAG 4 cut(s) 446, 567, 594, 746
FspI TGCGCA 1 cut(s) 173
GlaI GCGC 1 cut(s) 173
GluI GCNGC 8 cut(s) 20, 61, 125, 175, 518, 571, 706, 1174
GsaI CCCAGC 1 cut(s) 641
HaeIII GGCC 3 cut(s) 603, 623, 1075
HapII CCGG 2 cut(s) 600, 1254
HhaI GCGC 1 cut(s) 174
Hin1I GRCGYC 1 cut(s) 886
Hin1II CATG 9 cut(s) 463, 565, 663, 739, 944, 1036, 1044, 1067, 1103
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HincII GTYRAC 2 cut(s) 417, 1356
HindII GTYRAC 2 cut(s) 417, 1356
HindIII AAGCTT 1 cut(s) 374
HinfI GANTC 4 cut(s) 363, 413, 820, 1048
HpaII CCGG 2 cut(s) 600, 1254
HphI GGTGA 6 cut(s) 280, 857, 912, 929, 973, 1295
Hpy166II GTNNAC 2 cut(s) 417, 1356
Hpy188I TCNGA 5 cut(s) 766, 779, 881, 1115, 1181
Hpy188III TCNNGA 4 cut(s) 106, 203, 594, 770
Hpy8I GTNNAC 2 cut(s) 417, 1356
HpyAV CCTTC 1 cut(s) 699
HpyCH4III ACNGT 3 cut(s) 141, 716, 932
HpyCH4IV ACGT 4 cut(s) 258, 886, 986, 1378
HpyCH4V TGCA 7 cut(s) 55, 60, 332, 725, 739, 1032, 1342
HpyF3I CTNAG 7 cut(s) 23, 162, 353, 676, 701, 1112, 1271
HpySE526I ACGT 4 cut(s) 258, 886, 986, 1378
Hsp92I GRCGYC 1 cut(s) 886
Hsp92II CATG 9 cut(s) 463, 565, 663, 739, 944, 1036, 1044, 1067, 1103
HspAI GCGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 427
Kzo9I GATC 6 cut(s) 134, 427, 766, 1015, 1196, 1222
LmnI GCTCC 4 cut(s) 27, 85, 93, 653
Lsp1109I GCAGC 5 cut(s) 72, 111, 186, 582, 717
LweI GCATC 6 cut(s) 6, 20, 547, 1113, 1185, 1329
MabI ACCWGGT 1 cut(s) 615
MaeI CTAG 4 cut(s) 446, 567, 594, 746
MaeII ACGT 4 cut(s) 258, 886, 986, 1378
MaeIII GTNAC 2 cut(s) 904, 971
MalI GATC 6 cut(s) 136, 429, 768, 1017, 1198, 1224
MboI GATC 6 cut(s) 134, 427, 766, 1015, 1196, 1222
MboII GAAGA 9 cut(s) 46, 251, 753, 818, 854, 1010, 1194, 1312, 1345
MfeI CAATTG 1 cut(s) 50
MhlI GDGCHC 2 cut(s) 90, 644
MlyI GAGTC 3 cut(s) 422, 814, 1042
MmeI TCCRAC 2 cut(s) 369, 1174
MroXI GAANNNNTTC 1 cut(s) 784
MseI TTAA 6 cut(s) 179, 284, 302, 402, 750, 873
MslI CAYNNNNRTG 3 cut(s) 658, 939, 1238
MspA1I CMGCKG 1 cut(s) 22
MspI CCGG 2 cut(s) 600, 1254
MspR9I CCNGG 3 cut(s) 600, 617, 1077
MunI CAATTG 1 cut(s) 50
Mva1269I GAATGC 2 cut(s) 208, 332
MvaI CCWGG 2 cut(s) 617, 1077
NciI CCSGG 1 cut(s) 600
NcoI CCATGG 1 cut(s) 1063
NdeI CATATG 1 cut(s) 727
NdeII GATC 6 cut(s) 134, 427, 766, 1015, 1196, 1222
NlaIII CATG 9 cut(s) 463, 565, 663, 739, 944, 1036, 1044, 1067, 1103
NlaIV GGNNCC 2 cut(s) 249, 649
NsbI TGCGCA 1 cut(s) 173
NspI RCATGY 1 cut(s) 739
NspV TTCGAA 1 cut(s) 813
PctI GAATGC 2 cut(s) 208, 332
PdmI GAANNNNTTC 1 cut(s) 784
PfeI GAWTC 1 cut(s) 363
Pfl23II CGTACG 1 cut(s) 384
PkrI GCNGC 8 cut(s) 21, 62, 126, 176, 519, 572, 707, 1175
PleI GAGTC 3 cut(s) 421, 814, 1042
PmaCI CACGTG 1 cut(s) 987
PmlI CACGTG 1 cut(s) 987
PpsI GAGTC 3 cut(s) 421, 814, 1042
Ppu21I YACGTR 2 cut(s) 987, 1379
PshBI ATTAAT 2 cut(s) 284, 873
Psp124BI GAGCTC 1 cut(s) 90
Psp6I CCWGG 2 cut(s) 615, 1075
PspCI CACGTG 1 cut(s) 987
PspFI CCCAGC 1 cut(s) 637
PspGI CCWGG 2 cut(s) 615, 1075
PspLI CGTACG 1 cut(s) 384
PspN4I GGNNCC 2 cut(s) 249, 649
PspPI GGNCC 4 cut(s) 247, 602, 622, 1073
RsaI GTAC 4 cut(s) 386, 1001, 1188, 1377
RsaNI GTAC 4 cut(s) 385, 1000, 1187, 1376
RseI CAYNNNNRTG 3 cut(s) 658, 939, 1238
SacI GAGCTC 1 cut(s) 90
SaqAI TTAA 6 cut(s) 179, 284, 302, 402, 750, 873
SatI GCNGC 8 cut(s) 20, 61, 125, 175, 518, 571, 706, 1174
Sau3AI GATC 6 cut(s) 134, 427, 766, 1015, 1196, 1222
Sau96I GGNCC 4 cut(s) 247, 602, 622, 1073
SchI GAGTC 3 cut(s) 422, 814, 1042
ScrFI CCNGG 3 cut(s) 600, 617, 1077
SduI GDGCHC 2 cut(s) 90, 644
SexAI ACCWGGT 1 cut(s) 615
SfaNI GCATC 6 cut(s) 6, 20, 547, 1113, 1185, 1329
SfcI CTRYAG 1 cut(s) 1083
SfuI TTCGAA 1 cut(s) 813
SinI GGWCC 1 cut(s) 247
SmiMI CAYNNNNRTG 3 cut(s) 658, 939, 1238
SsiI CCGC 3 cut(s) 20, 518, 1173
SspMI CTAG 4 cut(s) 446, 567, 594, 746
SstI GAGCTC 1 cut(s) 90
StyD4I CCNGG 3 cut(s) 598, 615, 1075
StyI CCWWGG 1 cut(s) 1063
TaaI ACNGT 3 cut(s) 141, 716, 932
TaiI ACGT 4 cut(s) 261, 889, 989, 1381
TaqI TCGA 7 cut(s) 14, 119, 183, 336, 813, 1014, 1127
TauI GCSGC 3 cut(s) 22, 520, 1176
TfiI GAWTC 1 cut(s) 363
Tru1I TTAA 6 cut(s) 179, 284, 302, 402, 750, 873
Tru9I TTAA 6 cut(s) 179, 284, 302, 402, 750, 873
TscAI CASTG 2 cut(s) 144, 746
TseI GCWGC 5 cut(s) 60, 124, 174, 570, 705
TspDTI ATGAA 7 cut(s) 59, 252, 522, 906, 980, 1010, 1049
TspGWI ACGGA 1 cut(s) 375
TspRI CASTG 2 cut(s) 144, 746
VpaK11BI GGWCC 1 cut(s) 247
VspI ATTAAT 2 cut(s) 284, 873
XapI RAATTY 4 cut(s) 326, 627, 773, 1315
XbaI TCTAGA 1 cut(s) 593
XceI RCATGY 1 cut(s) 739
XmnI GAANNNNTTC 1 cut(s) 784
XspI CTAG 4 cut(s) 446, 567, 594, 746
ZraI GACGTC 1 cut(s) 887
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.