Rh2AG006800

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000125
Physical Location & Seq
Reverse (-)
623088 .. 624404
1317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG006800.1

Sequence Viewer

Length: 1317 bp
ATGAACTTGCGGCTTCTGGTTTGGAACAATATGAAGAGCCACAGAAAGAGGCCCTGCAATACCACAAAGTTGAATTTGATGGAGCTACCCATGGAAATCCTGGTCGAAATCTTGAAGAGAGTGCCTGCAAAGTCAGTGTGTCAAATCCGATGCGTCTCTAAGTCCTTGCTAAGCATAGTCGACTCCCCCTCTTTTGTCACGCTGCACTACTCGCATTTTCTACTTAATCCTGATTCTCATGTATCACCTGCTCCCCCTCAACTATTCCTGTGGTATGTCCGACCGTTATATTTTTGCCGTACTACATACCAAATACCGACCTTGCGTTCCCTTCATTACGACCATTCCGATGCCCAAGGTGCTCAACTTAATGCAAGAGATATTTTGCAGTCATCCAATCCCGCCGAGTACAGTCTATATTTTGTTTTCTGCAACTTGTTTTGCATCAGACGCGAACCTGCACTCAGCTTCTTGATCAATCCTCTTCGGGGAGAAGTTCTAAGGCTCCCACCCAGTCAGCAAGTTTGTGGTCCATATTCGAAAGTGCAGTTTGTTTGGACTGGTATGGGATTTGATAGTATAACCAACACCTACAAGATTCTTCGTGTTACAGAGATTGGCTTTTCTAAAACATTTGTATCCCAAGTGCTTGTACTCGGCACAAGCGAATGGCGGCAGGTACCCTCAACTCCACCTGTTCAGGGTTTATTAGATTGCTCCAGGCATATATGTGCAAATGGAGATATGCATTGGTTTTTTTATGATACAGGAACAACCGATATACTTTCTTTTGACTTCAAGAAAGAAGAGTTCTTTTGGACTCCCACTCCCTACAGATTCCCATATCCGACCTGGAAATTACACTTGATTAATTTTAGAGGATCTATGGCCATCGTGGATGCTTCATCAGGTATGAATATTGAGATATGGGTGATGAAAGATTACAATGAAAAACAGTGGATACTCGATTATTCCATCAATATCCACATGCTTGAATTAGATCCTGAATTTGAGTTTATTGGGGCTGTTTGTTGTGAATGGGAGCATGGCATACTTTTCATAGATGAACCGGCCACAATAACATTGTTTTTGGATCTAAGACAACCTGTTGTCACCAGGAATCTTTTCAAACGTCCAAATAAGGAGTGTGATTTGGTGTCTGAGCGAATCATGAGTCTTAATGGGAGCTTGTTTTCCCTAAAAAATTATGCAAATTTGGTCGAAGCAGAAGAACCGGCTACTTATAGCAATTGGACTGAAGGAGAAGCAAGCGGGAATAATTTCTTCTATCTGAAGGACAGAGGCTTTAGTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

438

Amino Acids

50.79

Weight (kDa)

6.42

Isoelectric Point (pI)

49.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 27 - 65 1.3e-09 F-box domain
FBA_1 PF07734 136 - 365 1e-16 F-box associated beta propeller domain
FBA_3 PF08268 138 - 323 1.5e-22 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 256
Acc36I ACCTGC 3 cut(s) 256, 466, 667
Acc65I GGTACC 1 cut(s) 679
AccB1I GGYRCC 1 cut(s) 679
AccI GTMKAC 1 cut(s) 180
AccII CGCG 1 cut(s) 453
AciI CCGC 4 cut(s) 10, 402, 673, 1272
AclWI GGATC 3 cut(s) 889, 995, 1101
AcoI YGGCCR 2 cut(s) 888, 1071
AcsI RAATTY 3 cut(s) 73, 1007, 1213
AcuI CTGAAG 2 cut(s) 1278, 1313
AfaI GTAC 4 cut(s) 301, 410, 654, 681
AfiI CCNNNNNNNGG 2 cut(s) 488, 701
AgsI TTSAA 5 cut(s) 73, 115, 799, 995, 1129
AjnI CCWGG 4 cut(s) 99, 719, 851, 1115
AluBI AGCT 3 cut(s) 85, 468, 1188
AluI AGCT 3 cut(s) 85, 468, 1188
Alw21I GWGCWC 1 cut(s) 364
Alw26I GTCTC 1 cut(s) 160
AlwI GGATC 3 cut(s) 889, 995, 1101
AoxI GGCC 3 cut(s) 50, 888, 1071
ApeKI GCWGC 1 cut(s) 202
ApoI RAATTY 3 cut(s) 73, 1007, 1213
ArsI GACNNNNNNTTYG 2 cut(s) 1159, 1191
AseI ATTAAT 1 cut(s) 870
Asp700I GAANNNNTTC 2 cut(s) 1124, 1280
Asp718I GGTACC 1 cut(s) 679
AspS9I GGNCC 2 cut(s) 51, 530
AsuHPI GGTGA 3 cut(s) 237, 943, 1105
AsuII TTCGAA 1 cut(s) 539
AvaII GGWCC 1 cut(s) 530
BaeI ACNNNNGTAYC 2 cut(s) 621, 654
BalI TGGCCA 1 cut(s) 890
BanI GGYRCC 1 cut(s) 679
Bbv12I GWGCWC 1 cut(s) 364
BbvI GCAGC 1 cut(s) 189
BccI CCATC 3 cut(s) 73, 899, 983
BceAI ACGGC 1 cut(s) 282
BciT130I CCWGG 4 cut(s) 101, 721, 853, 1117
BciVI GTATCC 2 cut(s) 649, 954
BclI TGATCA 1 cut(s) 474
BcoDI GTCTC 1 cut(s) 160
BfmI CTRYAG 1 cut(s) 832
BfuAI ACCTGC 3 cut(s) 256, 466, 667
BfuI GTATCC 2 cut(s) 649, 954
BisI GCNGC 3 cut(s) 11, 203, 674
BlpI GCTNAGC 1 cut(s) 170
BlsI GCNGC 3 cut(s) 12, 204, 675
Bme1390I CCNGG 4 cut(s) 101, 721, 853, 1117
Bme18I GGWCC 1 cut(s) 530
BmgT120I GGNCC 2 cut(s) 51, 530
BmiI GGNNCC 2 cut(s) 506, 681
BmrFI CCNGG 4 cut(s) 101, 721, 853, 1117
BmrI ACTGGG 1 cut(s) 507
BmsI GCATC 4 cut(s) 140, 340, 453, 889
BmuI ACTGGG 1 cut(s) 507
BpmI CTGGAG 1 cut(s) 703
Bpu1102I GCTNAGC 1 cut(s) 170
Bpu14I TTCGAA 1 cut(s) 539
BsaJI CCNNGG 2 cut(s) 90, 355
BsaXI ACNNNNNCTCC 2 cut(s) 811, 841
Bsc4I CCNNNNNNNGG 2 cut(s) 488, 701
Bse118I RCCGGY 2 cut(s) 1069, 1234
Bse1I ACTGG 2 cut(s) 513, 565
BseBI CCWGG 4 cut(s) 101, 721, 853, 1117
BseDI CCNNGG 2 cut(s) 90, 355
BseGI GGATG 2 cut(s) 392, 904
BseLI CCNNNNNNNGG 2 cut(s) 488, 701
BseMII CTCAG 2 cut(s) 478, 1152
BseNI ACTGG 2 cut(s) 513, 565
BseXI GCAGC 1 cut(s) 189
BsgI GTGCAG 3 cut(s) 188, 444, 566
Bsh1236I CGCG 1 cut(s) 453
Bsh1285I CGRYCG 1 cut(s) 284
BshFI GGCC 3 cut(s) 52, 890, 1073
BshNI GGYRCC 1 cut(s) 679
BsiEI CGRYCG 1 cut(s) 284
BsiHKAI GWGCWC 1 cut(s) 364
BsiSI CCGG 2 cut(s) 1070, 1235
BslI CCNNNNNNNGG 2 cut(s) 488, 701
BsmAI GTCTC 1 cut(s) 160
BsmBI CGTCTC 1 cut(s) 160
BsnI GGCC 3 cut(s) 52, 890, 1073
Bsp119I TTCGAA 1 cut(s) 539
Bsp1286I GDGCHC 1 cut(s) 364
Bsp143I GATC 4 cut(s) 474, 881, 1000, 1093
Bsp1720I GCTNAGC 1 cut(s) 170
Bsp19I CCATGG 1 cut(s) 90
BspACI CCGC 4 cut(s) 10, 402, 673, 1272
BspANI GGCC 3 cut(s) 52, 890, 1073
BspCNI CTCAG 2 cut(s) 477, 1153
BspFNI CGCG 1 cut(s) 453
BspHI TCATGA 1 cut(s) 1170
BspLI GGNNCC 2 cut(s) 506, 681
BspMI ACCTGC 3 cut(s) 256, 466, 667
BspPI GGATC 3 cut(s) 889, 995, 1101
BspQI GCTCTTC 1 cut(s) 29
BspT104I TTCGAA 1 cut(s) 539
BspT107I GGYRCC 1 cut(s) 679
BsrFI RCCGGY 2 cut(s) 1069, 1234
BsrI ACTGG 2 cut(s) 513, 565
BssAI RCCGGY 2 cut(s) 1069, 1234
BssECI CCNNGG 2 cut(s) 90, 355
BssMI GATC 4 cut(s) 474, 881, 1000, 1093
BssT1I CCWWGG 2 cut(s) 90, 355
Bst2UI CCWGG 4 cut(s) 101, 721, 853, 1117
Bst4CI ACNGT 3 cut(s) 285, 413, 957
Bst6I CTCTTC 4 cut(s) 29, 110, 489, 801
BstBI TTCGAA 1 cut(s) 539
BstC8I GCNNGC 2 cut(s) 126, 1270
BstDEI CTNAG 6 cut(s) 159, 170, 464, 500, 1097, 1161
BstDSI CCRYGG 1 cut(s) 90
BstF5I GGATG 2 cut(s) 392, 904
BstFNI CGCG 1 cut(s) 453
BstKTI GATC 4 cut(s) 477, 884, 1003, 1096
BstMAI GTCTC 1 cut(s) 160
BstMBI GATC 4 cut(s) 474, 881, 1000, 1093
BstMCI CGRYCG 1 cut(s) 284
BstMWI GCNNNNNNNGC 3 cut(s) 211, 359, 450
BstNI CCWGG 4 cut(s) 101, 721, 853, 1117
BstNSI RCATGY 1 cut(s) 991
BstSCI CCNGG 4 cut(s) 99, 719, 851, 1115
BstSFI CTRYAG 1 cut(s) 832
BstUI CGCG 1 cut(s) 453
BstV1I GCAGC 1 cut(s) 189
BstX2I RGATCY 3 cut(s) 881, 1000, 1093
BstYI RGATCY 3 cut(s) 881, 1000, 1093
BsuI GTATCC 2 cut(s) 649, 954
BsuRI GGCC 3 cut(s) 52, 890, 1073
BtgI CCRYGG 1 cut(s) 90
BtsCI GGATG 2 cut(s) 392, 904
BtsIMutI CAGTG 2 cut(s) 141, 962
BveI ACCTGC 3 cut(s) 256, 466, 667
Cac8I GCNNGC 2 cut(s) 126, 1270
CciI TCATGA 1 cut(s) 1170
Cfr10I RCCGGY 2 cut(s) 1069, 1234
Cfr13I GGNCC 2 cut(s) 51, 530
CseI GACGC 2 cut(s) 142, 459
Csp6I GTAC 4 cut(s) 300, 409, 653, 680
CviAII CATG 5 cut(s) 91, 239, 988, 1046, 1171
CviQI GTAC 4 cut(s) 300, 409, 653, 680
DdeI CTNAG 6 cut(s) 159, 170, 464, 500, 1097, 1161
DpnI GATC 4 cut(s) 476, 883, 1002, 1095
DpnII GATC 4 cut(s) 474, 881, 1000, 1093
EaeI YGGCCR 2 cut(s) 888, 1071
Eam1104I CTCTTC 4 cut(s) 29, 110, 489, 801
EarI CTCTTC 4 cut(s) 29, 110, 489, 801
Eco130I CCWWGG 2 cut(s) 90, 355
Eco47I GGWCC 1 cut(s) 530
Eco57I CTGAAG 2 cut(s) 1278, 1313
EcoO109I RGGNCCY 1 cut(s) 51
EcoRII CCWGG 4 cut(s) 99, 719, 851, 1115
EcoT14I CCWWGG 2 cut(s) 90, 355
EcoT22I ATGCAT 1 cut(s) 750
ErhI CCWWGG 2 cut(s) 90, 355
Esp3I CGTCTC 1 cut(s) 160
FaeI CATG 5 cut(s) 94, 242, 991, 1049, 1174
FatI CATG 5 cut(s) 90, 238, 987, 1045, 1170
FauI CCCGC 2 cut(s) 409, 1265
FbaI TGATCA 1 cut(s) 474
FblI GTMKAC 1 cut(s) 180
Fnu4HI GCNGC 3 cut(s) 11, 203, 674
FokI GGATG 2 cut(s) 379, 911
Fsp4HI GCNGC 3 cut(s) 11, 203, 674
GluI GCNGC 3 cut(s) 11, 203, 674
GsuI CTGGAG 1 cut(s) 703
HaeIII GGCC 3 cut(s) 52, 890, 1073
HapII CCGG 2 cut(s) 1070, 1235
HgaI GACGC 2 cut(s) 142, 459
Hin1II CATG 5 cut(s) 94, 242, 991, 1049, 1174
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HinfI GANTC 8 cut(s) 182, 233, 598, 820, 837, 1120, 1167, 1174
HpaII CCGG 2 cut(s) 1070, 1235
HphI GGTGA 3 cut(s) 237, 943, 1105
Hpy166II GTNNAC 1 cut(s) 181
Hpy188I TCNGA 7 cut(s) 149, 281, 349, 449, 849, 1162, 1293
Hpy188III TCNNGA 6 cut(s) 112, 230, 472, 799, 1004, 1171
Hpy8I GTNNAC 1 cut(s) 181
HpyAV CCTTC 3 cut(s) 341, 1253, 1288
HpyCH4III ACNGT 3 cut(s) 285, 413, 957
HpyCH4IV ACGT 1 cut(s) 1132
HpyF10VI GCNNNNNNNGC 3 cut(s) 211, 359, 450
HpyF3I CTNAG 6 cut(s) 159, 170, 464, 500, 1097, 1161
HpySE526I ACGT 1 cut(s) 1132
Hsp92II CATG 5 cut(s) 94, 242, 991, 1049, 1174
KpnI GGTACC 1 cut(s) 683
Ksp22I TGATCA 1 cut(s) 474
Kzo9I GATC 4 cut(s) 474, 881, 1000, 1093
LguI GCTCTTC 1 cut(s) 29
LmnI GCTCC 6 cut(s) 82, 256, 510, 722, 1042, 1185
Lsp1109I GCAGC 1 cut(s) 189
LweI GCATC 4 cut(s) 140, 340, 453, 889
MaeII ACGT 1 cut(s) 1132
MaeIII GTNAC 3 cut(s) 196, 607, 1111
MalI GATC 4 cut(s) 476, 883, 1002, 1095
MboI GATC 4 cut(s) 474, 881, 1000, 1093
MboII GAAGA 7 cut(s) 46, 127, 476, 593, 818, 1241, 1276
MfeI CAATTG 1 cut(s) 1249
MflI RGATCY 3 cut(s) 881, 1000, 1093
MhlI GDGCHC 1 cut(s) 364
MlsI TGGCCA 1 cut(s) 890
MluCI AATT 9 cut(s) 73, 857, 871, 995, 1007, 1204, 1213, 1249, 1279
MluNI TGGCCA 1 cut(s) 890
MlyI GAGTC 3 cut(s) 176, 814, 1183
MmeI TCCRAC 2 cut(s) 304, 872
MnlI CCTC 7 cut(s) 42, 199, 267, 492, 694, 872, 1295
Mox20I TGGCCA 1 cut(s) 890
Mph1103I ATGCAT 1 cut(s) 750
MroXI GAANNNNTTC 2 cut(s) 1124, 1280
MscI TGGCCA 1 cut(s) 890
MseI TTAA 4 cut(s) 225, 369, 870, 1179
MslI CAYNNNNRTG 2 cut(s) 348, 729
Msp20I TGGCCA 1 cut(s) 890
MspI CCGG 2 cut(s) 1070, 1235
MspR9I CCNGG 4 cut(s) 101, 721, 853, 1117
MunI CAATTG 1 cut(s) 1249
MvaI CCWGG 4 cut(s) 101, 721, 853, 1117
MvnI CGCG 1 cut(s) 453
MwoI GCNNNNNNNGC 3 cut(s) 211, 359, 450
NcoI CCATGG 1 cut(s) 90
NdeII GATC 4 cut(s) 474, 881, 1000, 1093
NlaIII CATG 5 cut(s) 94, 242, 991, 1049, 1174
NlaIV GGNNCC 2 cut(s) 506, 681
NmeAIII GCCGAG 2 cut(s) 430, 636
NmuCI GTSAC 2 cut(s) 196, 1111
NsiI ATGCAT 1 cut(s) 750
NspI RCATGY 1 cut(s) 991
NspV TTCGAA 1 cut(s) 539
PagI TCATGA 1 cut(s) 1170
PaqCI CACCTGC 1 cut(s) 256
PciSI GCTCTTC 1 cut(s) 29
PcsI WCGNNNNNNNCGW 2 cut(s) 345, 663
PdmI GAANNNNTTC 2 cut(s) 1124, 1280
PfeI GAWTC 5 cut(s) 233, 598, 837, 1120, 1167
PkrI GCNGC 3 cut(s) 12, 204, 675
PleI GAGTC 3 cut(s) 176, 814, 1182
PpsI GAGTC 3 cut(s) 176, 814, 1182
PshBI ATTAAT 1 cut(s) 870
Psp6I CCWGG 4 cut(s) 99, 719, 851, 1115
PspGI CCWGG 4 cut(s) 99, 719, 851, 1115
PspN4I GGNNCC 2 cut(s) 506, 681
PspPI GGNCC 2 cut(s) 51, 530
PsuI RGATCY 3 cut(s) 881, 1000, 1093
RsaI GTAC 4 cut(s) 301, 410, 654, 681
RsaNI GTAC 4 cut(s) 300, 409, 653, 680
RseI CAYNNNNRTG 2 cut(s) 348, 729
SalI GTCGAC 1 cut(s) 179
SapI GCTCTTC 1 cut(s) 29
SaqAI TTAA 4 cut(s) 225, 369, 870, 1179
SatI GCNGC 3 cut(s) 11, 203, 674
Sau3AI GATC 4 cut(s) 474, 881, 1000, 1093
Sau96I GGNCC 2 cut(s) 51, 530
SchI GAGTC 3 cut(s) 176, 814, 1183
ScrFI CCNGG 4 cut(s) 101, 721, 853, 1117
SduI GDGCHC 1 cut(s) 364
SfaNI GCATC 4 cut(s) 140, 340, 453, 889
SfcI CTRYAG 1 cut(s) 832
SfuI TTCGAA 1 cut(s) 539
SinI GGWCC 1 cut(s) 530
SmiMI CAYNNNNRTG 2 cut(s) 348, 729
Sse9I AATT 9 cut(s) 73, 857, 871, 995, 1007, 1204, 1213, 1249, 1279
SsiI CCGC 4 cut(s) 10, 402, 673, 1272
SspI AATATT 1 cut(s) 919
StyD4I CCNGG 4 cut(s) 99, 719, 851, 1115
StyI CCWWGG 2 cut(s) 90, 355
TaaI ACNGT 3 cut(s) 285, 413, 957
TaiI ACGT 1 cut(s) 1135
TaqI TCGA 5 cut(s) 105, 180, 539, 966, 1221
TasI AATT 9 cut(s) 73, 857, 871, 995, 1007, 1204, 1213, 1249, 1279
TatI WGTACW 2 cut(s) 408, 652
TauI GCSGC 2 cut(s) 13, 676
TfiI GAWTC 5 cut(s) 233, 598, 837, 1120, 1167
Tru1I TTAA 4 cut(s) 225, 369, 870, 1179
Tru9I TTAA 4 cut(s) 225, 369, 870, 1179
TscAI CASTG 2 cut(s) 141, 962
TseFI GTSAC 2 cut(s) 196, 1111
TseI GCWGC 1 cut(s) 202
Tsp45I GTSAC 2 cut(s) 196, 1111
TspDTI ATGAA 9 cut(s) 17, 47, 323, 894, 929, 950, 963, 1048, 1080
TspRI CASTG 2 cut(s) 141, 962
VpaK11BI GGWCC 1 cut(s) 530
VspI ATTAAT 1 cut(s) 870
XapI RAATTY 3 cut(s) 73, 1007, 1213
XceI RCATGY 1 cut(s) 991
XcmI CCANNNNNNNNNTGG 2 cut(s) 97, 849
XmiI GTMKAC 1 cut(s) 180
XmnI GAANNNNTTC 2 cut(s) 1124, 1280
Zsp2I ATGCAT 1 cut(s) 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.