FvH4_5g07510

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000125
Physical Location & Seq
Reverse (-)
4388969 .. 4391085
2117 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g07510.t1

Sequence Viewer

Length: 1281 bp
ATGGTGAGGTGCAAGAGATTGAGGAGGCAGTACTATAACGGCAACGAAAACCCTAGGCAGCTGATGGATCTACCCATAGATATCGTGGTGAAAATCCTTTTGAGACTGCCGGTAGAATCACTATGTCGCATCCGATGTGTGTCCAAGACCTTGTTAAACAAAGTTGACAGCCTCTCTTTCGTTAGGCAGTACACACTTTCACTCGTTACTGGCAACAACCATGTTGTTCAAGTACCTCAACTTATGTGCTTTGCTTACACAAGTCCTTCCGATGGAGAAGAGGACACTACTTCTGTGACTTTGCAATCACTGAGATATGATGGCGGTACCGCACTGACAAAAGGCGAATACACATTTACTCATTCGACGTCAAGCCCTTTCCATACAAGCTACAGTATATGTTTCGTTTTCTACAACTTGTTATGCATGGCCTGGGAAGATGGACATTGCCTGTTGATCAATCCTCTTCGTAGAGAAGTTTTAATTCTCCCAACCGATAGCATTGAACAACTTACAAAATATGGTCCAAATTCTGAAGTACACATTGGTTGGTATGGTATGGGTTTTGATAATATAACGAACACCTACAAAATTGTTCGTATTTCCATGATTCTCAGTAAGGAACCTTATAGTACCCTCGGCATGTTGGCGCATGTTCTTGTATTGGGAACGAGCTCATGGAGAGAGATATCATCTGTTCCTCCCTGTCTTTTAAATCGCGCCTATAATATTTGCGCATATGGAGATATGCATTGGCTGGTGAAAGCAGGAGGTGCAATAAAAAGCCACATAATTTCTTTTGACTTCAAGAATGAAGAGTTTTGTTGGACTCCTACTCCCCCCACATTGCAAAGCTCGAACAGGGATTCCAAATTGCACTTACTTACTTTAAGAGGATCAATGGCCATTGTGGAGACATTTTCATTGCCAGAAGGAGGTATGAATGTTGAGATATGGGTGATGAAAGATTATGCTAAGAAAGAGTGGGCGAGAGAGTACAACATAAACGTGGACATGCGTCCTGAGTTTGAGTTGAAGTATGCGACTTGTGGTGAATGGGAGCATGGCATATTTTTCAATGATCTTGACAATTCTTTGAAGTCCAATGGTATTGCTATATTTTTTTTGGATCTTAGATGTGATTCCATCAATCTTGTGACATGCCCACTTGAGACCGAGCAGTTTTCAAAGATCATGAGTTATTCTGGGAGCTTGATTTCCCTCAGAGATTATGGTACTCTAGGTTATACTAACGAGCCTAATGATGAACTGGTTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

427

Amino Acids

48.54

Weight (kDa)

5.85

Isoelectric Point (pI)

44.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 61 2.2e-08 F-box domain
FBA_3 PF08268 120 - 333 1.1e-22 F-box associated beta propeller domain
Beta-prop_KIB1-4 PF03478 132 - 332 9.9e-06 KIB1-4 beta-propeller
FBA_1 PF07734 140 - 361 3e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 371
Acc16I TGCGCA 1 cut(s) 736
Acc65I GGTACC 1 cut(s) 326
AccB1I GGYRCC 1 cut(s) 326
AccII CGCG 1 cut(s) 720
AciI CCGC 2 cut(s) 324, 330
AclWI GGATC 3 cut(s) 75, 904, 1137
AcoI YGGCCR 1 cut(s) 903
AcsI RAATTY 1 cut(s) 529
AcuI CTGAAG 1 cut(s) 555
AcyI GRCGYC 1 cut(s) 368
AfaI GTAC 8 cut(s) 32, 191, 234, 328, 540, 634, 998, 1237
AfiI CCNNNNNNNGG 2 cut(s) 272, 935
AgsI TTSAA 7 cut(s) 230, 506, 808, 1036, 1078, 1099, 1188
AjnI CCWGG 1 cut(s) 431
AjuI GAANNNNNNNTTGG 2 cut(s) 528, 560
AloI GAACNNNNNNTCC 2 cut(s) 851, 883
AluBI AGCT 5 cut(s) 61, 390, 675, 855, 1212
AluI AGCT 5 cut(s) 61, 390, 675, 855, 1212
Alw21I GWGCWC 1 cut(s) 677
Alw26I GTCTC 3 cut(s) 97, 908, 1166
AlwI GGATC 3 cut(s) 75, 904, 1137
AoxI GGCC 2 cut(s) 429, 903
ApeKI GCWGC 1 cut(s) 58
ApoI RAATTY 1 cut(s) 529
Asp718I GGTACC 1 cut(s) 326
AspA2I CCTAGG 1 cut(s) 53
AspLEI GCGC 3 cut(s) 652, 722, 737
AspS9I GGNCC 1 cut(s) 524
AsuHPI GGTGA 5 cut(s) 16, 100, 772, 970, 1064
AvaII GGWCC 1 cut(s) 524
AvrII CCTAGG 1 cut(s) 53
BalI TGGCCA 1 cut(s) 905
BanI GGYRCC 1 cut(s) 326
BanII GRGCYC 1 cut(s) 677
Bbv12I GWGCWC 1 cut(s) 677
BbvI GCAGC 1 cut(s) 70
BccI CCATC 5 cut(s) 58, 266, 314, 434, 1154
BceAI ACGGC 1 cut(s) 55
BciT130I CCWGG 1 cut(s) 433
BclI TGATCA 1 cut(s) 456
BcoDI GTCTC 3 cut(s) 97, 908, 1166
BfaI CTAG 2 cut(s) 54, 1241
BfmI CTRYAG 1 cut(s) 391
BisI GCNGC 1 cut(s) 59
BlnI CCTAGG 1 cut(s) 53
BlsI GCNGC 1 cut(s) 60
BmcAI AGTACT 1 cut(s) 32
Bme1390I CCNGG 1 cut(s) 433
Bme18I GGWCC 1 cut(s) 524
BmgT120I GGNCC 1 cut(s) 524
BmiI GGNNCC 2 cut(s) 328, 624
BmrFI CCNGG 1 cut(s) 433
BmsI GCATC 1 cut(s) 138
BoxI GACNNNNGTC 1 cut(s) 1017
BpuEI CTTGAG 1 cut(s) 1190
BsaHI GRCGYC 1 cut(s) 368
BsaI GGTCTC 1 cut(s) 1166
BsaJI CCNNGG 3 cut(s) 53, 432, 637
BsaXI ACNNNNNCTCC 2 cut(s) 820, 850
Bsc4I CCNNNNNNNGG 2 cut(s) 272, 935
Bse118I RCCGGY 1 cut(s) 109
Bse1I ACTGG 2 cut(s) 214, 1275
Bse3DI GCAATG 3 cut(s) 445, 845, 923
BseBI CCWGG 1 cut(s) 433
BseDI CCNNGG 3 cut(s) 53, 432, 637
BseGI GGATG 1 cut(s) 129
BseLI CCNNNNNNNGG 2 cut(s) 272, 935
BseMI GCAATG 3 cut(s) 445, 845, 923
BseMII CTCAG 4 cut(s) 302, 628, 1014, 1237
BseNI ACTGG 2 cut(s) 214, 1275
BseRI GAGGAG 1 cut(s) 37
BseXI GCAGC 1 cut(s) 70
Bsh1236I CGCG 1 cut(s) 720
BshFI GGCC 2 cut(s) 431, 905
BshNI GGYRCC 1 cut(s) 326
BsiHKAI GWGCWC 1 cut(s) 677
BsiSI CCGG 1 cut(s) 110
BslI CCNNNNNNNGG 2 cut(s) 272, 935
BsmAI GTCTC 3 cut(s) 97, 908, 1166
BsnI GGCC 2 cut(s) 431, 905
Bso31I GGTCTC 1 cut(s) 1166
Bsp1286I GDGCHC 1 cut(s) 677
Bsp143I GATC 6 cut(s) 67, 456, 896, 1081, 1129, 1191
BspACI CCGC 2 cut(s) 324, 330
BspANI GGCC 2 cut(s) 431, 905
BspCNI CTCAG 4 cut(s) 303, 627, 1015, 1236
BspFNI CGCG 1 cut(s) 720
BspHI TCATGA 1 cut(s) 1194
BspLI GGNNCC 2 cut(s) 328, 624
BspPI GGATC 3 cut(s) 75, 904, 1137
BspT107I GGYRCC 1 cut(s) 326
BspTNI GGTCTC 1 cut(s) 1166
BsrDI GCAATG 3 cut(s) 445, 845, 923
BsrFI RCCGGY 1 cut(s) 109
BsrI ACTGG 2 cut(s) 214, 1275
BssAI RCCGGY 1 cut(s) 109
BssECI CCNNGG 3 cut(s) 53, 432, 637
BssMI GATC 6 cut(s) 67, 456, 896, 1081, 1129, 1191
BssNI GRCGYC 1 cut(s) 368
BssT1I CCWWGG 1 cut(s) 53
Bst2UI CCWGG 1 cut(s) 433
Bst4CI ACNGT 1 cut(s) 395
Bst6I CTCTTC 3 cut(s) 273, 471, 810
BstACI GRCGYC 1 cut(s) 368
BstAPI GCANNNNNTGC 1 cut(s) 773
BstDEI CTNAG 6 cut(s) 311, 614, 975, 1023, 1133, 1223
BstF5I GGATG 1 cut(s) 129
BstFNI CGCG 1 cut(s) 720
BstHHI GCGC 3 cut(s) 652, 722, 737
BstKTI GATC 6 cut(s) 70, 459, 899, 1084, 1132, 1194
BstMAI GTCTC 3 cut(s) 97, 908, 1166
BstMBI GATC 6 cut(s) 67, 456, 896, 1081, 1129, 1191
BstMWI GCNNNNNNNGC 1 cut(s) 773
BstNI CCWGG 1 cut(s) 433
BstNSI RCATGY 4 cut(s) 646, 656, 1018, 1164
BstPAI GACNNNNGTC 1 cut(s) 1017
BstSCI CCNGG 1 cut(s) 431
BstSFI CTRYAG 1 cut(s) 391
BstUI CGCG 1 cut(s) 720
BstV1I GCAGC 1 cut(s) 70
BstX2I RGATCY 2 cut(s) 67, 1129
BstYI RGATCY 2 cut(s) 67, 1129
BsuRI GGCC 2 cut(s) 431, 905
BtsCI GGATG 1 cut(s) 129
BtsIMutI CAGTG 2 cut(s) 308, 332
CciI TCATGA 1 cut(s) 1194
CfoI GCGC 3 cut(s) 652, 722, 737
Cfr10I RCCGGY 1 cut(s) 109
Cfr13I GGNCC 1 cut(s) 524
CseI GACGC 1 cut(s) 1007
Csp6I GTAC 8 cut(s) 31, 190, 233, 327, 539, 633, 997, 1236
CviQI GTAC 8 cut(s) 31, 190, 233, 327, 539, 633, 997, 1236
DdeI CTNAG 6 cut(s) 311, 614, 975, 1023, 1133, 1223
DpnI GATC 6 cut(s) 69, 458, 898, 1083, 1131, 1193
DpnII GATC 6 cut(s) 67, 456, 896, 1081, 1129, 1191
DraI TTTAAA 1 cut(s) 714
EaeI YGGCCR 1 cut(s) 903
Eam1104I CTCTTC 3 cut(s) 273, 471, 810
EarI CTCTTC 3 cut(s) 273, 471, 810
Ecl136II GAGCTC 1 cut(s) 675
Eco130I CCWWGG 1 cut(s) 53
Eco24I GRGCYC 1 cut(s) 677
Eco31I GGTCTC 1 cut(s) 1166
Eco32I GATATC 2 cut(s) 82, 690
Eco47I GGWCC 1 cut(s) 524
Eco53kI GAGCTC 1 cut(s) 675
Eco57I CTGAAG 1 cut(s) 555
EcoICRI GAGCTC 1 cut(s) 675
EcoRII CCWGG 1 cut(s) 431
EcoRV GATATC 2 cut(s) 82, 690
EcoT14I CCWWGG 1 cut(s) 53
EcoT22I ATGCAT 2 cut(s) 428, 753
EcoT38I GRGCYC 1 cut(s) 677
ErhI CCWWGG 1 cut(s) 53
FauNDI CATATG 1 cut(s) 739
FbaI TGATCA 1 cut(s) 456
Fnu4HI GCNGC 1 cut(s) 59
FokI GGATG 1 cut(s) 116
FriOI GRGCYC 1 cut(s) 677
Fsp4HI GCNGC 1 cut(s) 59
FspBI CTAG 2 cut(s) 54, 1241
FspI TGCGCA 1 cut(s) 736
GlaI GCGC 3 cut(s) 651, 721, 736
GluI GCNGC 1 cut(s) 59
HaeIII GGCC 2 cut(s) 431, 905
HapII CCGG 1 cut(s) 110
HgaI GACGC 1 cut(s) 1007
HhaI GCGC 3 cut(s) 652, 722, 737
Hin1I GRCGYC 1 cut(s) 368
Hin6I GCGC 3 cut(s) 650, 720, 735
HinP1I GCGC 3 cut(s) 650, 720, 735
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HinfI GANTC 5 cut(s) 116, 610, 829, 866, 1142
HpaII CCGG 1 cut(s) 110
HphI GGTGA 5 cut(s) 16, 100, 772, 970, 1064
Hpy166II GTNNAC 4 cut(s) 166, 192, 541, 1012
Hpy188I TCNGA 4 cut(s) 134, 271, 535, 1226
Hpy188III TCNNGA 4 cut(s) 808, 1022, 1085, 1195
Hpy8I GTNNAC 4 cut(s) 166, 192, 541, 1012
Hpy99I CGWCG 1 cut(s) 370
HpyAV CCTTC 2 cut(s) 276, 926
HpyCH4III ACNGT 1 cut(s) 395
HpyCH4IV ACGT 2 cut(s) 368, 1008
HpyCH4V TGCA 7 cut(s) 12, 304, 426, 751, 776, 850, 877
HpyF10VI GCNNNNNNNGC 1 cut(s) 773
HpyF3I CTNAG 6 cut(s) 311, 614, 975, 1023, 1133, 1223
HpySE526I ACGT 2 cut(s) 368, 1008
Hsp92I GRCGYC 1 cut(s) 368
HspAI GCGC 3 cut(s) 650, 720, 735
KpnI GGTACC 1 cut(s) 330
Ksp22I TGATCA 1 cut(s) 456
Kzo9I GATC 6 cut(s) 67, 456, 896, 1081, 1129, 1191
LmnI GCTCC 2 cut(s) 1060, 1209
Lsp1109I GCAGC 1 cut(s) 70
LweI GCATC 1 cut(s) 138
MaeI CTAG 2 cut(s) 54, 1241
MaeII ACGT 2 cut(s) 368, 1008
MaeIII GTNAC 4 cut(s) 205, 295, 1156, 1273
MalI GATC 6 cut(s) 69, 458, 898, 1083, 1131, 1193
MboI GATC 6 cut(s) 67, 456, 896, 1081, 1129, 1191
MboII GAAGA 4 cut(s) 290, 449, 458, 827
MflI RGATCY 2 cut(s) 67, 1129
MhlI GDGCHC 1 cut(s) 677
MlsI TGGCCA 1 cut(s) 905
MluCI AATT 6 cut(s) 483, 529, 591, 792, 872, 1090
MluNI TGGCCA 1 cut(s) 905
MlyI GAGTC 1 cut(s) 823
MmeI TCCRAC 1 cut(s) 806
Mox20I TGGCCA 1 cut(s) 905
Mph1103I ATGCAT 2 cut(s) 428, 753
MscI TGGCCA 1 cut(s) 905
MseI TTAA 4 cut(s) 155, 482, 713, 890
MslI CAYNNNNRTG 1 cut(s) 1007
Msp20I TGGCCA 1 cut(s) 905
MspA1I CMGCKG 1 cut(s) 61
MspI CCGG 1 cut(s) 110
MspR9I CCNGG 1 cut(s) 433
MvaI CCWGG 1 cut(s) 433
MvnI CGCG 1 cut(s) 720
MwoI GCNNNNNNNGC 1 cut(s) 773
NdeI CATATG 1 cut(s) 739
NdeII GATC 6 cut(s) 67, 456, 896, 1081, 1129, 1191
NlaIV GGNNCC 2 cut(s) 328, 624
NmeAIII GCCGAG 1 cut(s) 618
NmuCI GTSAC 2 cut(s) 295, 1156
NsbI TGCGCA 1 cut(s) 736
NsiI ATGCAT 2 cut(s) 428, 753
NspI RCATGY 4 cut(s) 646, 656, 1018, 1164
PagI TCATGA 1 cut(s) 1194
PfeI GAWTC 4 cut(s) 116, 610, 866, 1142
PkrI GCNGC 1 cut(s) 60
PleI GAGTC 1 cut(s) 823
PpsI GAGTC 1 cut(s) 823
PshAI GACNNNNGTC 1 cut(s) 1017
Psp124BI GAGCTC 1 cut(s) 677
Psp6I CCWGG 1 cut(s) 431
PspGI CCWGG 1 cut(s) 431
PspN4I GGNNCC 2 cut(s) 328, 624
PspPI GGNCC 1 cut(s) 524
PsuI RGATCY 2 cut(s) 67, 1129
PvuII CAGCTG 1 cut(s) 61
RsaI GTAC 8 cut(s) 32, 191, 234, 328, 540, 634, 998, 1237
RsaNI GTAC 8 cut(s) 31, 190, 233, 327, 539, 633, 997, 1236
RseI CAYNNNNRTG 1 cut(s) 1007
SacI GAGCTC 1 cut(s) 677
SaqAI TTAA 4 cut(s) 155, 482, 713, 890
SatI GCNGC 1 cut(s) 59
Sau3AI GATC 6 cut(s) 67, 456, 896, 1081, 1129, 1191
Sau96I GGNCC 1 cut(s) 524
ScaI AGTACT 1 cut(s) 32
SchI GAGTC 1 cut(s) 823
ScrFI CCNGG 1 cut(s) 433
SduI GDGCHC 1 cut(s) 677
SfaNI GCATC 1 cut(s) 138
SfcI CTRYAG 1 cut(s) 391
SinI GGWCC 1 cut(s) 524
SmiMI CAYNNNNRTG 1 cut(s) 1007
SmlI CTYRAG 1 cut(s) 1169
SmoI CTYRAG 1 cut(s) 1169
Sse9I AATT 6 cut(s) 483, 529, 591, 792, 872, 1090
SsiI CCGC 2 cut(s) 324, 330
SspI AATATT 1 cut(s) 730
SspMI CTAG 2 cut(s) 54, 1241
SstI GAGCTC 1 cut(s) 677
StyD4I CCNGG 1 cut(s) 431
StyI CCWWGG 1 cut(s) 53
TaaI ACNGT 1 cut(s) 395
TaiI ACGT 2 cut(s) 371, 1011
TaqI TCGA 2 cut(s) 365, 857
TaqII GACCGA 1 cut(s) 1190
TasI AATT 6 cut(s) 483, 529, 591, 792, 872, 1090
TatI WGTACW 4 cut(s) 30, 189, 538, 996
TfiI GAWTC 4 cut(s) 116, 610, 866, 1142
Tru1I TTAA 4 cut(s) 155, 482, 713, 890
Tru9I TTAA 4 cut(s) 155, 482, 713, 890
TscAI CASTG 2 cut(s) 315, 339
TseFI GTSAC 2 cut(s) 295, 1156
TseI GCWGC 1 cut(s) 58
Tsp45I GTSAC 2 cut(s) 295, 1156
TspDTI ATGAA 5 cut(s) 828, 912, 956, 977, 1281
TspRI CASTG 2 cut(s) 315, 339
VpaK11BI GGWCC 1 cut(s) 524
XapI RAATTY 1 cut(s) 529
XceI RCATGY 4 cut(s) 646, 656, 1018, 1164
XcmI CCANNNNNNNNNTGG 1 cut(s) 82
XmaJI CCTAGG 1 cut(s) 53
XspI CTAG 2 cut(s) 54, 1241
ZraI GACGTC 1 cut(s) 369
ZrmI AGTACT 1 cut(s) 32
Zsp2I ATGCAT 2 cut(s) 428, 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.