FvH4_4g34580

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000125
Physical Location & Seq
Reverse (-)
32280333 .. 32282356
2024 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g34580.t1

Sequence Viewer

Length: 1386 bp
ATGGAGAGGGCACAGAGAATGAAGAGCGGCAACAATAATGCAGAGCTGAGAGTAGTGATGGATCTATTAGAATTGCCTTTCGATATCCTCCTAAACATCCTCTCAAGATTGCCGGCGGAATCACTTTTCCTCATCCGAAGCGTGTCTAAGGCCTTGTTAAACATGGCTGATGACCCCTCTTTTGCTAGAGCACTAAGTCACAACGTGCATCTACAAAAGGCCGACATGGAATTAATAGACAACCGCGAGTGGTCGTATTACCAAAACGATTTTGTCTTCTGCAACTTGTTTTTCCTGAGAAAATGCAGATATGATGGTGGTGGAAGCCCTTGCTTCTTAGTCAATCCTCTTAGGGGAGGAGAGGTTCTAAGACTTCCAACATTGAATAAGTATTCCAATGTAAGAAAGGACTGGTATGGTATGGGATTTGATAGTCTAACAAACGCACACAAGATTGTTCGTGTTTCCAGAGTTACTAATGATACAGAGAGCCGTCTTGTTACCCAAGTTCTTGTATTAGGCGAGAGCTCATGGCGAGAGATACCTTCGGTTCCCCCTGATGACTTGAATTCTAACATTAATGCGAAGAACGCATGTGCCAATGGAGACATGCATTGGTTAATTTGGTTAATTAGAGAGAAGAAGGGAATTAGTGAAGAAACATACCACATAATTTCTTTCGACTTCAAGAGAGAAGAGTTCTATTGGACTCCTCATCCCTTGTTAGAAAGCTCGAACGTACGCGTCGAGTGGACAAAGTTACAGTTGCTTACTCTAAGAGGATCTCTGGCCCTGGTGTGTGCTCCATCATCAGAAGCTGGGACGGCGGATATTGAGATATGGGTGTTGAAAGATTATGATAAAAAAGAGTGGACGCGAGATTACATCATAAACAGCAAACATTTTAGTATTCATGGTTCTTGCCACGAATGGGAGCATGGCATATTTTTCGATACGAATATGGATACAGTCTTTGTGGATCTCAATTGTTTTTCTGTGAATCGTATAAAATACCGTGCTACCATCTTGAGCTATACTTGGAGCTTGGTTTCCTTGAAAGAATATGGCAATTTGGTTAAAGATCTAGCTGAAGAACCATCAGAGCAAAGCCAAACGCATCAGCCATTCTATAAGGCATTAAGATCAAATCTGTGGGAGATAGTTGGGAGTGTCAAGTCGTATGGAATCGGCATTCTCCTTATGGGTGCTTACATTCTTCAGAACAGAGATTCCAGTGAATGGCAACTTGACAAGCGTGTTGATGATTTTGCTCCCAAAGTTGTCCAATTACAACATGCTGAGACTGCAGGCATTGTGGATTGTATCATATCAAAGACTCGAACCTGCTCTTGGTCCAGCATAACACAGTTGGGATTGGGAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

462

Amino Acids

52.95

Weight (kDa)

6.09

Isoelectric Point (pI)

40.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 22 - 61 4.3e-08 F-box domain
F-box-like PF12937 23 - 64 3.6e-06 F-box-like
FBA_1 PF07734 85 - 305 6.2e-16 F-box associated beta propeller domain
FBA_3 PF08268 113 - 302 2.7e-21 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1352
AccB7I CCANNNNNTGG 1 cut(s) 1239
AccBSI CCGCTC 1 cut(s) 27
AccII CGCG 3 cut(s) 246, 744, 877
AciI CCGC 4 cut(s) 27, 116, 244, 827
AclWI GGATC 3 cut(s) 69, 790, 987
AcsI RAATTY 1 cut(s) 568
AcuI CTGAAG 2 cut(s) 1110, 1202
AdeI CACNNNGTG 1 cut(s) 205
AfaI GTAC 1 cut(s) 741
AfiI CCNNNNNNNGG 4 cut(s) 353, 931, 1239, 1350
AflIII ACRYGT 1 cut(s) 742
AgsI TTSAA 5 cut(s) 385, 568, 688, 850, 1057
AjnI CCWGG 1 cut(s) 792
AjuI GAANNNNNNNTTGG 2 cut(s) 1333, 1365
AloI GAACNNNNNNTCC 4 cut(s) 348, 380, 1214, 1246
AluBI AGCT 7 cut(s) 46, 528, 732, 818, 1032, 1044, 1088
AluI AGCT 7 cut(s) 46, 528, 732, 818, 1032, 1044, 1088
Alw21I GWGCWC 3 cut(s) 193, 530, 805
Alw26I GTCTC 2 cut(s) 600, 1295
AlwI GGATC 3 cut(s) 69, 790, 987
AlwNI CAGNNNCTG 1 cut(s) 818
AoxI GGCC 3 cut(s) 150, 219, 789
ApoI RAATTY 1 cut(s) 568
ArsI GACNNNNNNTTYG 2 cut(s) 164, 196
AseI ATTAAT 2 cut(s) 233, 579
AspS9I GGNCC 2 cut(s) 790, 1353
AvaII GGWCC 1 cut(s) 1353
BaeGI GKGCMC 1 cut(s) 13
BanII GRGCYC 1 cut(s) 530
BbsI GAAGAC 1 cut(s) 268
Bbv12I GWGCWC 3 cut(s) 193, 530, 805
BccI CCATC 5 cut(s) 52, 308, 814, 1031, 1105
BceAI ACGGC 2 cut(s) 477, 840
BcgI CGANNNNNNTGC 2 cut(s) 931, 965
BciT130I CCWGG 1 cut(s) 794
BciVI GTATCC 1 cut(s) 958
BcoDI GTCTC 2 cut(s) 600, 1295
BfaI CTAG 2 cut(s) 186, 1085
BfmI CTRYAG 1 cut(s) 1305
BfuAI ACCTGC 1 cut(s) 1352
BfuI GTATCC 1 cut(s) 958
BglII AGATCT 1 cut(s) 1081
BisI GCNGC 1 cut(s) 28
BlsI GCNGC 1 cut(s) 29
Bme1390I CCNGG 1 cut(s) 794
Bme18I GGWCC 1 cut(s) 1353
BmgT120I GGNCC 2 cut(s) 790, 1353
BmiI GGNNCC 1 cut(s) 552
BmrFI CCNGG 1 cut(s) 794
BmsI GCATC 2 cut(s) 217, 1126
BpiI GAAGAC 1 cut(s) 268
BpuEI CTTGAG 2 cut(s) 88, 1048
BsaJI CCNNGG 1 cut(s) 792
BsaXI ACNNNNNCTCC 2 cut(s) 348, 378
Bsc4I CCNNNNNNNGG 4 cut(s) 353, 931, 1239, 1350
Bse118I RCCGGY 1 cut(s) 112
Bse1I ACTGG 2 cut(s) 416, 1233
BseBI CCWGG 1 cut(s) 794
BseDI CCNNGG 1 cut(s) 792
BseGI GGATG 3 cut(s) 96, 132, 715
BseLI CCNNNNNNNGG 4 cut(s) 353, 931, 1239, 1350
BseMII CTCAG 3 cut(s) 38, 287, 1290
BseNI ACTGG 2 cut(s) 416, 1233
BseRI GAGGAG 2 cut(s) 372, 702
BseSI GKGCMC 1 cut(s) 13
BseYI CCCAGC 1 cut(s) 818
Bsh1236I CGCG 3 cut(s) 246, 744, 877
BshFI GGCC 3 cut(s) 152, 221, 791
BsiHKAI GWGCWC 3 cut(s) 193, 530, 805
BsiSI CCGG 1 cut(s) 113
BsiWI CGTACG 1 cut(s) 739
BslFI GGGAC 1 cut(s) 835
BslI CCNNNNNNNGG 4 cut(s) 353, 931, 1239, 1350
BsmAI GTCTC 2 cut(s) 600, 1295
BsmFI GGGAC 1 cut(s) 835
BsmI GAATGC 1 cut(s) 1191
BsnI GGCC 3 cut(s) 152, 221, 791
Bsp1286I GDGCHC 4 cut(s) 13, 193, 530, 805
Bsp143I GATC 5 cut(s) 61, 782, 979, 1081, 1142
BspACI CCGC 4 cut(s) 27, 116, 244, 827
BspANI GGCC 3 cut(s) 152, 221, 791
BspCNI CTCAG 3 cut(s) 39, 288, 1291
BspFNI CGCG 3 cut(s) 246, 744, 877
BspLI GGNNCC 1 cut(s) 552
BspMAI CTGCAG 1 cut(s) 1309
BspMI ACCTGC 1 cut(s) 1352
BspPI GGATC 3 cut(s) 69, 790, 987
BspQI GCTCTTC 1 cut(s) 17
BsrBI CCGCTC 1 cut(s) 27
BsrFI RCCGGY 1 cut(s) 112
BsrI ACTGG 2 cut(s) 416, 1233
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 1 cut(s) 792
BssMI GATC 5 cut(s) 61, 782, 979, 1081, 1142
Bst2UI CCWGG 1 cut(s) 794
Bst4CI ACNGT 4 cut(s) 765, 970, 1016, 1368
Bst6I CTCTTC 2 cut(s) 17, 690
BstC8I GCNNGC 2 cut(s) 114, 1309
BstDEI CTNAG 9 cut(s) 47, 147, 194, 296, 337, 350, 368, 776, 1299
BstF5I GGATG 3 cut(s) 96, 132, 715
BstFNI CGCG 3 cut(s) 246, 744, 877
BstKTI GATC 5 cut(s) 64, 785, 982, 1084, 1145
BstMAI GTCTC 2 cut(s) 600, 1295
BstMBI GATC 5 cut(s) 61, 782, 979, 1081, 1142
BstMWI GCNNNNNNNGC 3 cut(s) 590, 824, 1304
BstNI CCWGG 1 cut(s) 794
BstNSI RCATGY 3 cut(s) 597, 613, 1298
BstSCI CCNGG 1 cut(s) 792
BstSFI CTRYAG 1 cut(s) 1305
BstSLI GKGCMC 1 cut(s) 13
BstUI CGCG 3 cut(s) 246, 744, 877
BstV2I GAAGAC 1 cut(s) 268
BstX2I RGATCY 4 cut(s) 61, 782, 979, 1081
BstYI RGATCY 4 cut(s) 61, 782, 979, 1081
BsuI GTATCC 1 cut(s) 958
BsuRI GGCC 3 cut(s) 152, 221, 791
BtsCI GGATG 3 cut(s) 96, 132, 715
BtsIMutI CAGTG 1 cut(s) 1240
BveI ACCTGC 1 cut(s) 1352
Cac8I GCNNGC 2 cut(s) 114, 1309
CaiI CAGNNNCTG 1 cut(s) 818
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 2 cut(s) 790, 1353
CseI GACGC 2 cut(s) 733, 883
Csp6I GTAC 1 cut(s) 740
CviAII CATG 8 cut(s) 163, 226, 531, 594, 610, 914, 938, 1295
CviQI GTAC 1 cut(s) 740
DdeI CTNAG 9 cut(s) 47, 147, 194, 296, 337, 350, 368, 776, 1299
DpnI GATC 5 cut(s) 63, 784, 981, 1083, 1144
DpnII GATC 5 cut(s) 61, 782, 979, 1081, 1142
DraIII CACNNNGTG 1 cut(s) 205
Eam1104I CTCTTC 2 cut(s) 17, 690
EarI CTCTTC 2 cut(s) 17, 690
EciI GGCGGA 2 cut(s) 131, 842
Ecl136II GAGCTC 1 cut(s) 528
Eco147I AGGCCT 1 cut(s) 152
Eco24I GRGCYC 1 cut(s) 530
Eco32I GATATC 1 cut(s) 85
Eco47I GGWCC 1 cut(s) 1353
Eco53kI GAGCTC 1 cut(s) 528
Eco57I CTGAAG 2 cut(s) 1110, 1202
EcoICRI GAGCTC 1 cut(s) 528
EcoRI GAATTC 1 cut(s) 568
EcoRII CCWGG 1 cut(s) 792
EcoRV GATATC 1 cut(s) 85
EcoT22I ATGCAT 1 cut(s) 615
EcoT38I GRGCYC 1 cut(s) 530
FaeI CATG 8 cut(s) 166, 229, 534, 597, 613, 917, 941, 1298
FaqI GGGAC 1 cut(s) 835
FatI CATG 8 cut(s) 162, 225, 530, 593, 609, 913, 937, 1294
Fnu4HI GCNGC 1 cut(s) 28
FokI GGATG 3 cut(s) 83, 119, 702
FriOI GRGCYC 1 cut(s) 530
Fsp4HI GCNGC 1 cut(s) 28
FspBI CTAG 2 cut(s) 186, 1085
GluI GCNGC 1 cut(s) 28
GsaI CCCAGC 1 cut(s) 822
HaeIII GGCC 3 cut(s) 152, 221, 791
HapII CCGG 1 cut(s) 113
HgaI GACGC 2 cut(s) 733, 883
Hin1II CATG 8 cut(s) 166, 229, 534, 597, 613, 917, 941, 1298
HinfI GANTC 6 cut(s) 119, 709, 1000, 1185, 1229, 1336
HpaII CCGG 1 cut(s) 113
Hpy166II GTNNAC 2 cut(s) 753, 873
Hpy188I TCNGA 4 cut(s) 137, 814, 1102, 1221
Hpy188III TCNNGA 5 cut(s) 105, 295, 468, 688, 1027
Hpy8I GTNNAC 2 cut(s) 753, 873
Hpy99I CGWCG 1 cut(s) 749
HpyAV CCTTC 2 cut(s) 555, 637
HpyCH4III ACNGT 4 cut(s) 765, 970, 1016, 1368
HpyCH4IV ACGT 2 cut(s) 204, 738
HpyCH4V TGCA 6 cut(s) 41, 208, 282, 306, 613, 1307
HpyF10VI GCNNNNNNNGC 3 cut(s) 590, 824, 1304
HpyF3I CTNAG 9 cut(s) 47, 147, 194, 296, 337, 350, 368, 776, 1299
HpySE526I ACGT 2 cut(s) 204, 738
Hsp92II CATG 8 cut(s) 166, 229, 534, 597, 613, 917, 941, 1298
KroI GCCGGC 1 cut(s) 112
KroNI GCCGGC 1 cut(s) 114
Kzo9I GATC 5 cut(s) 61, 782, 979, 1081, 1142
LguI GCTCTTC 1 cut(s) 17
LmnI GCTCC 4 cut(s) 808, 934, 1041, 1276
LweI GCATC 2 cut(s) 217, 1126
MaeI CTAG 2 cut(s) 186, 1085
MaeII ACGT 2 cut(s) 204, 738
MaeIII GTNAC 4 cut(s) 197, 472, 499, 759
MalI GATC 5 cut(s) 63, 784, 981, 1083, 1144
MbiI CCGCTC 1 cut(s) 27
MboI GATC 5 cut(s) 61, 782, 979, 1081, 1142
MboII GAAGA 8 cut(s) 34, 268, 598, 652, 668, 707, 1103, 1208
MfeI CAATTG 1 cut(s) 985
MflI RGATCY 4 cut(s) 61, 782, 979, 1081
MhlI GDGCHC 4 cut(s) 13, 193, 530, 805
MluI ACGCGT 1 cut(s) 742
MlyI GAGTC 2 cut(s) 703, 1330
MmeI TCCRAC 1 cut(s) 401
MnlI CCTC 9 cut(s) 98, 110, 140, 187, 350, 355, 357, 723, 773
Mph1103I ATGCAT 1 cut(s) 615
MroNI GCCGGC 1 cut(s) 112
MseI TTAA 7 cut(s) 158, 233, 579, 620, 629, 1077, 1139
MspI CCGG 1 cut(s) 113
MspR9I CCNGG 1 cut(s) 794
MunI CAATTG 1 cut(s) 985
Mva1269I GAATGC 1 cut(s) 1191
MvaI CCWGG 1 cut(s) 794
MvnI CGCG 3 cut(s) 246, 744, 877
MwoI GCNNNNNNNGC 3 cut(s) 590, 824, 1304
NaeI GCCGGC 1 cut(s) 114
NdeII GATC 5 cut(s) 61, 782, 979, 1081, 1142
NgoMIV GCCGGC 1 cut(s) 112
NlaIII CATG 8 cut(s) 166, 229, 534, 597, 613, 917, 941, 1298
NlaIV GGNNCC 1 cut(s) 552
NmuCI GTSAC 1 cut(s) 197
NsiI ATGCAT 1 cut(s) 615
NspI RCATGY 3 cut(s) 597, 613, 1298
PceI AGGCCT 1 cut(s) 152
PciSI GCTCTTC 1 cut(s) 17
PcsI WCGNNNNNNNCGW 1 cut(s) 744
PctI GAATGC 1 cut(s) 1191
PdiI GCCGGC 1 cut(s) 114
PfeI GAWTC 4 cut(s) 119, 1000, 1185, 1229
Pfl23II CGTACG 1 cut(s) 739
PflMI CCANNNNNTGG 1 cut(s) 1239
PkrI GCNGC 1 cut(s) 29
PleI GAGTC 2 cut(s) 703, 1330
PpsI GAGTC 2 cut(s) 703, 1330
PshBI ATTAAT 2 cut(s) 233, 579
Psp124BI GAGCTC 1 cut(s) 530
Psp6I CCWGG 1 cut(s) 792
PspFI CCCAGC 1 cut(s) 818
PspGI CCWGG 1 cut(s) 792
PspLI CGTACG 1 cut(s) 739
PspN4I GGNNCC 1 cut(s) 552
PspPI GGNCC 2 cut(s) 790, 1353
PsrI GAACNNNNNNTAC 2 cut(s) 901, 933
PstI CTGCAG 1 cut(s) 1309
PstNI CAGNNNCTG 1 cut(s) 818
PsuI RGATCY 4 cut(s) 61, 782, 979, 1081
RsaI GTAC 1 cut(s) 741
RsaNI GTAC 1 cut(s) 740
SacI GAGCTC 1 cut(s) 530
SapI GCTCTTC 1 cut(s) 17
SaqAI TTAA 7 cut(s) 158, 233, 579, 620, 629, 1077, 1139
SatI GCNGC 1 cut(s) 28
Sau3AI GATC 5 cut(s) 61, 782, 979, 1081, 1142
Sau96I GGNCC 2 cut(s) 790, 1353
SchI GAGTC 2 cut(s) 703, 1330
ScrFI CCNGG 1 cut(s) 794
SduI GDGCHC 4 cut(s) 13, 193, 530, 805
SfaNI GCATC 2 cut(s) 217, 1126
SfcI CTRYAG 1 cut(s) 1305
SinI GGWCC 1 cut(s) 1353
SmlI CTYRAG 2 cut(s) 103, 1027
SmoI CTYRAG 2 cut(s) 103, 1027
SseBI AGGCCT 1 cut(s) 152
SsiI CCGC 4 cut(s) 27, 116, 244, 827
SspMI CTAG 2 cut(s) 186, 1085
SstI GAGCTC 1 cut(s) 530
StuI AGGCCT 1 cut(s) 152
StyD4I CCNGG 1 cut(s) 792
TaaI ACNGT 4 cut(s) 765, 970, 1016, 1368
TaiI ACGT 2 cut(s) 207, 741
TaqI TCGA 6 cut(s) 81, 681, 734, 747, 951, 1339
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 4 cut(s) 119, 1000, 1185, 1229
Tru1I TTAA 7 cut(s) 158, 233, 579, 620, 629, 1077, 1139
Tru9I TTAA 7 cut(s) 158, 233, 579, 620, 629, 1077, 1139
TscAI CASTG 1 cut(s) 1240
TseFI GTSAC 1 cut(s) 197
Tsp45I GTSAC 1 cut(s) 197
TspDTI ATGAA 2 cut(s) 35, 902
TspRI CASTG 1 cut(s) 1240
Van91I CCANNNNNTGG 1 cut(s) 1239
VpaK11BI GGWCC 1 cut(s) 1353
VspI ATTAAT 2 cut(s) 233, 579
XapI RAATTY 1 cut(s) 568
XceI RCATGY 3 cut(s) 597, 613, 1298
XspI CTAG 2 cut(s) 186, 1085
Zsp2I ATGCAT 1 cut(s) 615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.