Rroxscaffold_2G00121570

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000125
Physical Location & Seq
Reverse (-)
54198245 .. 54199519
1275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00121570.1

Sequence Viewer

Length: 1275 bp
ATGTTGATGGACCTGCCCTCGGATATCCTCGTCAAGATCCTTTCGAGATTGCCATCCGAATCAATCGGCTGCATTCGATGCGTGTCTAAGGCTTTGTTAAACATGGTTGATGACCCCTGTTTTGTTAAACTGCATATGGGCTACTCCGACGAGGTACCTCTTCTCATGTCTTTTGCTGAACCTTATGCTTCTGAGACCAGTGAAGTTATAGCATCCTTGCAATCAGTCACATACGATGGCAGTGGCACTGCCTTGACAACAAGAGGTAAATATGCATTTCAAGTCTCCACAACATACCAGCGAGATATGCCACCTTACTCCATAGATTTTGTTTTCCGCAACTTGTTTTGCTTTCGAAATAGATGCGATCATGGAGTTTGTTTTTTGATCAATCCTCCTAGAGGACAAGTTCTAAGGCTTCCTAGGAATGGTATTTCCAAAATTGCAGAGTCCCAAGTATTCTGTGACTGGTATGGTATGGGATTTGATAGTGTAACTAACACCCTCAAGATTCTTGCTGTCGCCCAATTTGGCCAATTTGGTAAGCCTATCTGCCGGGCAGCCCAGGTTCTTGTATTGGGCACAAGCTCATGGCGAGATGTAACTCCTCCTCCTTGTCTATTGTCTAGTAACAGTAGTAAAAGTGCATCTGCAAATGGAGACATGCATTGGTTGATTTATGGCAATTTCAGTAAAAAAGAAATTTATGGAAGATGCCATATAATTTCTTTCGATTTTAAGAAAGAAAAGTTCTATTGGACTCCTCACCCCGCGGCACAAAGCTTAGACAATTACTGGCATTTGTATTTGCTTACTTTCAGAGGATCTCTGGCCATCGTGGATACTTCTTCATCACAAGGTATGATTACGAAGATTGATATATGGGTATTGAAAGATTATGACAAAAAAGAGTGGGCAAGAGATTACAGCATAAACATCAAAAATTTTGACTTGGTTAGGCAGTTTGGATTGTTGATAAAGGTTACTTGTGGCCAATGGGAGCATGGCATATATTTCAAAAATTTTGACAAAATCCCTACGTTCTTTTTGGATCTAAGATGTTATTCCATGAATACCATAACATGTGGTAGTGGGGACCGTACCAAAATTTTAAGTTATACTGGGAGCTTGATATCCTTAAAAGATTATGAGAATTCTGTTCGAGCTGAAAACAGTACTGAAAGCCTAAAAAGTTATGGCAATTTGATCAAAGAAGAAGCACAAGGCTTTAGTTTATATAAGAGGCATGTGCTGCGAGGAGTTTCAGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

424

Amino Acids

48.07

Weight (kDa)

8.65

Isoelectric Point (pI)

27.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 2 - 42 1.4e-07 F-box domain
F-box-like PF12937 4 - 40 1e-05 F-box-like
FBA_3 PF08268 96 - 330 3.2e-23 F-box associated beta propeller domain
FBA_1 PF07734 127 - 310 3.8e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 21
Acc65I GGTACC 1 cut(s) 154
AccB1I GGYRCC 1 cut(s) 154
AccII CGCG 1 cut(s) 773
AciI CCGC 3 cut(s) 337, 771, 773
AclWI GGATC 3 cut(s) 31, 832, 1059
AcoI YGGCCR 3 cut(s) 532, 831, 991
AcsI RAATTY 5 cut(s) 702, 943, 1021, 1107, 1153
AfaI GTAC 3 cut(s) 156, 1102, 1177
AfiI CCNNNNNNNGG 3 cut(s) 19, 401, 428
AflIII ACRYGT 1 cut(s) 1082
AgsI TTSAA 3 cut(s) 281, 892, 1018
AjnI CCWGG 1 cut(s) 564
AluBI AGCT 4 cut(s) 588, 783, 1128, 1166
AluI AGCT 4 cut(s) 588, 783, 1128, 1166
Alw26I GTCTC 3 cut(s) 188, 289, 654
AlwI GGATC 3 cut(s) 31, 832, 1059
AoxI GGCC 3 cut(s) 532, 831, 991
ApeKI GCWGC 3 cut(s) 69, 560, 1252
ApoI RAATTY 5 cut(s) 702, 943, 1021, 1107, 1153
ArsI GACNNNNNNTTYG 2 cut(s) 104, 136
Asp718I GGTACC 1 cut(s) 154
AspA2I CCTAGG 1 cut(s) 422
AspS9I GGNCC 2 cut(s) 10, 1096
AsuC2I CCSGG 1 cut(s) 557
AsuHPI GGTGA 1 cut(s) 758
AsuII TTCGAA 1 cut(s) 355
AvaII GGWCC 2 cut(s) 10, 1096
AvrII CCTAGG 1 cut(s) 422
BaeGI GKGCMC 1 cut(s) 584
BalI TGGCCA 3 cut(s) 534, 833, 993
BanI GGYRCC 1 cut(s) 154
BbvI GCAGC 3 cut(s) 56, 572, 1239
BccI CCATC 3 cut(s) 61, 230, 842
BcgI CGANNNNNNTGC 2 cut(s) 345, 379
BciT130I CCWGG 1 cut(s) 566
BciVI GTATCC 1 cut(s) 835
BclI TGATCA 2 cut(s) 387, 1206
BcnI CCSGG 1 cut(s) 557
BcoDI GTCTC 3 cut(s) 188, 289, 654
BfaI CTAG 3 cut(s) 399, 423, 627
BfuAI ACCTGC 1 cut(s) 21
BfuI GTATCC 1 cut(s) 835
BisI GCNGC 4 cut(s) 70, 561, 774, 1253
BlnI CCTAGG 1 cut(s) 422
BlsI GCNGC 4 cut(s) 71, 562, 775, 1254
BmcAI AGTACT 1 cut(s) 1177
Bme1390I CCNGG 2 cut(s) 557, 566
Bme18I GGWCC 2 cut(s) 10, 1096
BmgT120I GGNCC 2 cut(s) 10, 1096
BmiI GGNNCC 2 cut(s) 156, 1097
BmrFI CCNGG 2 cut(s) 557, 566
BmrI ACTGGG 1 cut(s) 1131
BmsI GCATC 5 cut(s) 68, 221, 353, 656, 704
BmuI ACTGGG 1 cut(s) 1131
Bpu14I TTCGAA 1 cut(s) 355
BpuEI CTTGAG 1 cut(s) 491
BpuMI CCSGG 1 cut(s) 557
BsaBI GATNNNNATC 1 cut(s) 52
BsaI GGTCTC 1 cut(s) 188
BsaJI CCNNGG 4 cut(s) 18, 422, 564, 771
BsaXI ACNNNNNCTCC 3 cut(s) 595, 625, 1251
Bsc4I CCNNNNNNNGG 3 cut(s) 19, 401, 428
Bse1I ACTGG 4 cut(s) 198, 473, 800, 1126
Bse8I GATNNNNATC 1 cut(s) 52
BseBI CCWGG 1 cut(s) 566
BseDI CCNNGG 4 cut(s) 18, 422, 564, 771
BseGI GGATG 2 cut(s) 53, 212
BseJI GATNNNNATC 1 cut(s) 52
BseLI CCNNNNNNNGG 3 cut(s) 19, 401, 428
BseMII CTCAG 1 cut(s) 183
BseNI ACTGG 4 cut(s) 198, 473, 800, 1126
BseRI GAGGAG 4 cut(s) 597, 600, 753, 1272
BseSI GKGCMC 1 cut(s) 584
BseXI GCAGC 3 cut(s) 56, 572, 1239
Bsh1236I CGCG 1 cut(s) 773
BshFI GGCC 3 cut(s) 534, 833, 993
BshNI GGYRCC 1 cut(s) 154
BsiSI CCGG 1 cut(s) 556
BslFI GGGAC 2 cut(s) 436, 1109
BslI CCNNNNNNNGG 3 cut(s) 19, 401, 428
BsmAI GTCTC 3 cut(s) 188, 289, 654
BsmFI GGGAC 2 cut(s) 436, 1109
BsmI GAATGC 1 cut(s) 72
BsnI GGCC 3 cut(s) 534, 833, 993
Bso31I GGTCTC 1 cut(s) 188
Bsp119I TTCGAA 1 cut(s) 355
Bsp1286I GDGCHC 1 cut(s) 584
Bsp143I GATC 6 cut(s) 36, 367, 387, 824, 1051, 1206
BspACI CCGC 3 cut(s) 337, 771, 773
BspANI GGCC 3 cut(s) 534, 833, 993
BspCNI CTCAG 1 cut(s) 184
BspFNI CGCG 1 cut(s) 773
BspLI GGNNCC 2 cut(s) 156, 1097
BspMI ACCTGC 1 cut(s) 21
BspPI GGATC 3 cut(s) 31, 832, 1059
BspT104I TTCGAA 1 cut(s) 355
BspT107I GGYRCC 1 cut(s) 154
BspTNI GGTCTC 1 cut(s) 188
BsrI ACTGG 4 cut(s) 198, 473, 800, 1126
BssECI CCNNGG 4 cut(s) 18, 422, 564, 771
BssMI GATC 6 cut(s) 36, 367, 387, 824, 1051, 1206
BssT1I CCWWGG 1 cut(s) 422
Bst2UI CCWGG 1 cut(s) 566
Bst4CI ACNGT 3 cut(s) 635, 1100, 1175
Bst6I CTCTTC 1 cut(s) 165
BstAPI GCANNNNNTGC 2 cut(s) 78, 1252
BstBI TTCGAA 1 cut(s) 355
BstDEI CTNAG 5 cut(s) 87, 192, 413, 784, 1055
BstDSI CCRYGG 1 cut(s) 771
BstENI CCTNNNNNAGG 1 cut(s) 399
BstF5I GGATG 2 cut(s) 53, 212
BstFNI CGCG 1 cut(s) 773
BstKTI GATC 6 cut(s) 39, 370, 390, 827, 1054, 1209
BstMAI GTCTC 3 cut(s) 188, 289, 654
BstMBI GATC 6 cut(s) 36, 367, 387, 824, 1051, 1206
BstMWI GCNNNNNNNGC 3 cut(s) 78, 307, 1252
BstNI CCWGG 1 cut(s) 566
BstNSI RCATGY 3 cut(s) 667, 1086, 1250
BstSCI CCNGG 2 cut(s) 555, 564
BstSLI GKGCMC 1 cut(s) 584
BstUI CGCG 1 cut(s) 773
BstV1I GCAGC 3 cut(s) 56, 572, 1239
BstX2I RGATCY 3 cut(s) 36, 824, 1051
BstYI RGATCY 3 cut(s) 36, 824, 1051
BsuI GTATCC 1 cut(s) 835
BsuRI GGCC 3 cut(s) 534, 833, 993
BtgI CCRYGG 1 cut(s) 771
BtsCI GGATG 2 cut(s) 53, 212
BtsI GCAGTG 2 cut(s) 246, 247
BtsIMutI CAGTG 3 cut(s) 205, 246, 247
BveI ACCTGC 1 cut(s) 21
Cfr13I GGNCC 2 cut(s) 10, 1096
Cfr42I CCGCGG 1 cut(s) 774
Csp6I GTAC 3 cut(s) 155, 1101, 1176
CviAII CATG 9 cut(s) 103, 166, 371, 591, 664, 1004, 1069, 1083, 1247
CviQI GTAC 3 cut(s) 155, 1101, 1176
DdeI CTNAG 5 cut(s) 87, 192, 413, 784, 1055
DpnI GATC 6 cut(s) 38, 369, 389, 826, 1053, 1208
DpnII GATC 6 cut(s) 36, 367, 387, 824, 1051, 1206
EaeI YGGCCR 3 cut(s) 532, 831, 991
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
Eco130I CCWWGG 1 cut(s) 422
Eco31I GGTCTC 1 cut(s) 188
Eco32I GATATC 2 cut(s) 25, 1134
Eco47I GGWCC 2 cut(s) 10, 1096
EcoNI CCTNNNNNAGG 1 cut(s) 399
EcoRI GAATTC 1 cut(s) 1153
EcoRII CCWGG 1 cut(s) 564
EcoRV GATATC 2 cut(s) 25, 1134
EcoT14I CCWWGG 1 cut(s) 422
EcoT22I ATGCAT 2 cut(s) 277, 669
ErhI CCWWGG 1 cut(s) 422
FaeI CATG 9 cut(s) 106, 169, 374, 594, 667, 1007, 1072, 1086, 1250
FaqI GGGAC 2 cut(s) 436, 1109
FatI CATG 9 cut(s) 102, 165, 370, 590, 663, 1003, 1068, 1082, 1246
FauI CCCGC 1 cut(s) 778
FauNDI CATATG 1 cut(s) 135
FbaI TGATCA 2 cut(s) 387, 1206
Fnu4HI GCNGC 4 cut(s) 70, 561, 774, 1253
FokI GGATG 2 cut(s) 40, 199
Fsp4HI GCNGC 4 cut(s) 70, 561, 774, 1253
FspBI CTAG 3 cut(s) 399, 423, 627
GluI GCNGC 4 cut(s) 70, 561, 774, 1253
HaeIII GGCC 3 cut(s) 534, 833, 993
HapII CCGG 1 cut(s) 556
Hin1II CATG 9 cut(s) 106, 169, 374, 594, 667, 1007, 1072, 1086, 1250
HindIII AAGCTT 1 cut(s) 781
HinfI GANTC 4 cut(s) 59, 449, 511, 760
HpaII CCGG 1 cut(s) 556
HphI GGTGA 1 cut(s) 758
Hpy188I TCNGA 6 cut(s) 22, 58, 148, 193, 821, 1274
Hpy188III TCNNGA 3 cut(s) 34, 45, 508
Hpy99I CGWCG 1 cut(s) 152
HpyCH4III ACNGT 3 cut(s) 635, 1100, 1175
HpyCH4IV ACGT 1 cut(s) 1040
HpyCH4V TGCA 8 cut(s) 72, 133, 220, 275, 446, 647, 653, 667
HpyF10VI GCNNNNNNNGC 3 cut(s) 78, 307, 1252
HpyF3I CTNAG 5 cut(s) 87, 192, 413, 784, 1055
HpySE526I ACGT 1 cut(s) 1040
Hsp92II CATG 9 cut(s) 106, 169, 374, 594, 667, 1007, 1072, 1086, 1250
KpnI GGTACC 1 cut(s) 158
Ksp22I TGATCA 2 cut(s) 387, 1206
KspI CCGCGG 1 cut(s) 774
Kzo9I GATC 6 cut(s) 36, 367, 387, 824, 1051, 1206
LmnI GCTCC 2 cut(s) 1000, 1125
Lsp1109I GCAGC 3 cut(s) 56, 572, 1239
LweI GCATC 5 cut(s) 68, 221, 353, 656, 704
MaeI CTAG 3 cut(s) 399, 423, 627
MaeII ACGT 1 cut(s) 1040
MaeIII GTNAC 6 cut(s) 226, 464, 493, 601, 629, 982
MalI GATC 6 cut(s) 38, 369, 389, 826, 1053, 1208
MboI GATC 6 cut(s) 36, 367, 387, 824, 1051, 1206
MboII GAAGA 5 cut(s) 152, 723, 840, 883, 1226
MflI RGATCY 3 cut(s) 36, 824, 1051
MhlI GDGCHC 1 cut(s) 584
MlsI TGGCCA 3 cut(s) 534, 833, 993
MluNI TGGCCA 3 cut(s) 534, 833, 993
MlyI GAGTC 2 cut(s) 458, 754
MmeI TCCRAC 1 cut(s) 171
Mox20I TGGCCA 3 cut(s) 534, 833, 993
Mph1103I ATGCAT 2 cut(s) 277, 669
MscI TGGCCA 3 cut(s) 534, 833, 993
MseI TTAA 5 cut(s) 98, 126, 738, 1112, 1139
Msp20I TGGCCA 3 cut(s) 534, 833, 993
MspA1I CMGCKG 1 cut(s) 773
MspI CCGG 1 cut(s) 556
MspR9I CCNGG 2 cut(s) 557, 566
Mva1269I GAATGC 1 cut(s) 72
MvaI CCWGG 1 cut(s) 566
MvnI CGCG 1 cut(s) 773
MwoI GCNNNNNNNGC 3 cut(s) 78, 307, 1252
NciI CCSGG 1 cut(s) 557
NdeI CATATG 1 cut(s) 135
NdeII GATC 6 cut(s) 36, 367, 387, 824, 1051, 1206
NlaIII CATG 9 cut(s) 106, 169, 374, 594, 667, 1007, 1072, 1086, 1250
NlaIV GGNNCC 2 cut(s) 156, 1097
NmuCI GTSAC 2 cut(s) 226, 464
NsiI ATGCAT 2 cut(s) 277, 669
NspI RCATGY 3 cut(s) 667, 1086, 1250
NspV TTCGAA 1 cut(s) 355
PciI ACATGT 1 cut(s) 1082
PctI GAATGC 1 cut(s) 72
PfeI GAWTC 2 cut(s) 59, 511
PkrI GCNGC 4 cut(s) 71, 562, 775, 1254
PleI GAGTC 2 cut(s) 457, 754
PpsI GAGTC 2 cut(s) 457, 754
PscI ACATGT 1 cut(s) 1082
Psp6I CCWGG 1 cut(s) 564
PspGI CCWGG 1 cut(s) 564
PspN4I GGNNCC 2 cut(s) 156, 1097
PspPI GGNCC 2 cut(s) 10, 1096
PsuI RGATCY 3 cut(s) 36, 824, 1051
RsaI GTAC 3 cut(s) 156, 1102, 1177
RsaNI GTAC 3 cut(s) 155, 1101, 1176
SacII CCGCGG 1 cut(s) 774
SaqAI TTAA 5 cut(s) 98, 126, 738, 1112, 1139
SatI GCNGC 4 cut(s) 70, 561, 774, 1253
Sau3AI GATC 6 cut(s) 36, 367, 387, 824, 1051, 1206
Sau96I GGNCC 2 cut(s) 10, 1096
ScaI AGTACT 1 cut(s) 1177
SchI GAGTC 2 cut(s) 458, 754
ScrFI CCNGG 2 cut(s) 557, 566
SduI GDGCHC 1 cut(s) 584
SfaNI GCATC 5 cut(s) 68, 221, 353, 656, 704
Sfr303I CCGCGG 1 cut(s) 774
SfuI TTCGAA 1 cut(s) 355
SgrBI CCGCGG 1 cut(s) 774
SinI GGWCC 2 cut(s) 10, 1096
SmlI CTYRAG 1 cut(s) 506
SmoI CTYRAG 1 cut(s) 506
SsiI CCGC 3 cut(s) 337, 771, 773
SspMI CTAG 3 cut(s) 399, 423, 627
StyD4I CCNGG 2 cut(s) 555, 564
StyI CCWWGG 1 cut(s) 422
TaaI ACNGT 3 cut(s) 635, 1100, 1175
TaiI ACGT 1 cut(s) 1043
TaqI TCGA 5 cut(s) 44, 76, 355, 732, 1162
TatI WGTACW 1 cut(s) 1175
TauI GCSGC 1 cut(s) 776
TfiI GAWTC 2 cut(s) 59, 511
Tru1I TTAA 5 cut(s) 98, 126, 738, 1112, 1139
Tru9I TTAA 5 cut(s) 98, 126, 738, 1112, 1139
TscAI CASTG 3 cut(s) 205, 247, 253
TseFI GTSAC 2 cut(s) 226, 464
TseI GCWGC 3 cut(s) 69, 560, 1252
Tsp45I GTSAC 2 cut(s) 226, 464
TspDTI ATGAA 2 cut(s) 840, 1085
TspRI CASTG 3 cut(s) 205, 247, 253
VpaK11BI GGWCC 2 cut(s) 10, 1096
XagI CCTNNNNNAGG 1 cut(s) 399
XapI RAATTY 5 cut(s) 702, 943, 1021, 1107, 1153
XceI RCATGY 3 cut(s) 667, 1086, 1250
XcmI CCANNNNNNNNNTGG 1 cut(s) 1001
XmaJI CCTAGG 1 cut(s) 422
XspI CTAG 3 cut(s) 399, 423, 627
ZrmI AGTACT 1 cut(s) 1177
Zsp2I ATGCAT 2 cut(s) 277, 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.