Rroxscaffold_3G00263530

F-box kelch-repeat protein At3g06240-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000125
Physical Location & Seq
Forward (+)
57468017 .. 57469774
1758 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00263530.1

Sequence Viewer

Length: 1248 bp
ATGGAGATTGAGACCAAGAAAATGAAGAGGCAGTTCAGCAGCAACCACAACACCGCAAAGCCAACTGTGATCAAAGACCTACCAAAGGCTATCTTGGTCCAAATCCTTTTGAAACTGCCCTCAAAATCACTCTTTTGCCTCCGTTGTGTGTCTAAGGCCTTCTCAAGGTCCGTCGATGACCACTCTTTCATTGCACTTCACAACCGGTTACTTGTGGATGCCAAAGGCGCTGTAGATGTCCCCCAACTTCTGGCTGCTAAAAATGTTCGATCATCTAGTTCCTCAAATTTTGTGGCTCTTCGATCGGTCAAGTACGACGGCAGCTGCTTAACAAAAGGCAACTATGCAGTCAAGGTATCGAGCAGCATGTACTTACATTTTGTCTTCCAAAATTTATTTGGCTTTAGATTGTGTGGTGATGAGCAGCAGTTCTTGTTAGTCAATCCACTAAGTATGAGACTCCCAACAAGTAGCAACATACAACATCTTACAAGAAATCAGGATCCGGAAGTGAGATTTGTTTATTACTATGGCATGGGATTCGATAAGACAAGTAACAAGCACAAAATTGTTCGTGTTCGCAGAATCTGTAGGGATGATTACAGATTACTGTATGCGGGGACCCATGTTCTTGAATTGGGTACAACCTCATGGCGTGAGATAGACTCGGCTGTTCCCGGTAACTGGAGATTACTGGATGGCGCATGTGCATGTGGAGATATACATTGGTGTGCAAGTGGAGATACGCATTGGTTGAATAGAAGTGCACTGCAGAGTGGTATAATCACTTTTGACTTCACGAAAGAAGGGTTCTATATGAATCCTACTCCTCCCGGATCGTTCAGCTCGAACAAGAACTTGCATTTGCTTACTATAAGAGGAGCTTTGGCCATTGTGACGACTTCTTCGTCAGCAGATACGACTCAGATTGAGATATGGGTGATGAAAGATTATGATAGAAAAGTGTGGATGCAAGAGTACACAGTAAATGTTGGAGTGTTTTCTGATTGTGGACTGAAGTTTGCTACTTGTGGTGAATGGGAACATGGCATATATTTCAATCACAGCAGCAGAGATTCTGAAATAATTTGTACATCTTTTTTGGATCTAAGATCTACTTCAATTAGGTGTTTTATATATCCATTAATGGGTTATAAGCACATCTTAAGTTATACTGGCAGCTTGATGTCGTTACAAGATTATGACAACTTGGTTGATGGTAATGAGCTTGTGAAGCACAGGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1 FBA_3

Protein Analysis

415

Amino Acids

47.02

Weight (kDa)

8.96

Isoelectric Point (pI)

47.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 25 - 63 8.2e-07 F-box domain
FBA_3 PF08268 111 - 377 5.3e-19 F-box associated beta propeller domain
FBA_1 PF07734 140 - 330 1.8e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48550 AT5G48550
fragaria_vesca FvH4_1g00551 FvH4_1g00570 FvH4_1g00691 FvH4_1g00700 FvH4_1g00812 FvH4_1g20161 FvH4_1g25190 FvH4_2g04190 FvH4_2g20921 FvH4_2g25871 FvH4_3g13181 FvH4_3g19662 FvH4_3g40671 FvH4_4g22410 FvH4_4g34520 FvH4_4g34580 FvH4_5g06780 FvH4_5g07350 FvH4_5g07470 FvH4_5g07510 FvH4_5g08848 FvH4_5g31171 FvH4_5g38320 FvH4_6g03511 FvH4_6g09071 FvH4_6g09550 FvH4_6g09801 FvH4_6g09911 FvH4_6g14781 FvH4_6g22690 FvH4_6g45801 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47440 FvH4_6g47471 FvH4_6g47480
malus_domestica MD04G1179800.v1.1 MD11G1005600.v1.1 MD11G1006200.v1.1 MD11G1006300.v1.1 MD11G1006900.v1.1 MD12G1195000.v1.1 MD12G1195500.v1.1 MD12G1195600.v1.1
prunus_persica Prupe.2G095600_v2.0.a1 Prupe.2G095700_v2.0.a1 Prupe.2G095800_v2.0.a1 Prupe.2G095900_v2.0.a1 Prupe.2G096000_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G196700_v2.0.a1 Prupe.2G209200_v2.0.a1 Prupe.3G238400_v2.0.a1 Prupe.7G182200_v2.0.a1 Prupe.7G194900_v2.0.a1 Prupe.7G195100_v2.0.a1 Prupe.7G195400_v2.0.a1 Prupe.8G061400_v2.0.a1
pyrus_communis pycom01g13020 pycom04g15890 pycom09g19490 pycom09g19510 pycom10g28160 pycom12g18120 pycom12g18180
rosa_chinensis RchiOBHm_Chr2g0085201 RchiOBHm_Chr2g0164001 RchiOBHm_Chr3g0449831 RchiOBHm_Chr3g0460411 RchiOBHm_Chr3g0480281 RchiOBHm_Chr4g0428611 RchiOBHm_Chr5g0016491 RchiOBHm_Chr6g0253541
rosa_laevigata RLG00000004425 RLG00000004426 RLG00000005189 RLG00000005350 RLG00000007140 RLG00000015004 RLG00000015666 RLG00000015801 RLG00000015804 RLG00000015807 RLG00000018680 RLG00000021432 RLG00000021625 RLG00000021626 RLG00000023498 RLG00000023500 RLG00000023502 RLG00000023505 RLG00000025014 RLG00000025039 RLG00000025070 RLG00000025093 RLG00000025094 RLG00000025791 RLG00000026900 RLG00000031177
rosa_multiflora Rmu_co8452909.1_g000001 Rmu_co8488687.1_g000001 Rmu_sc0000610.1_g000006 Rmu_sc0000770.1_g000026 Rmu_sc0001755.1_g000003 Rmu_sc0002072.1_g000002 Rmu_sc0002676.1_g000002 Rmu_sc0003133.1_g000022 Rmu_sc0003797.1_g000014 Rmu_sc0003901.1_g000002 Rmu_sc0003901.1_g000004 Rmu_sc0003906.1_g000004 Rmu_sc0004212.1_g000002 Rmu_sc0004621.1_g000026 Rmu_sc0006704.1_g000010 Rmu_sc0006944.1_g000006 Rmu_sc0008647.1_g000003 Rmu_sc0010698.1_g000005 Rmu_sc0010842.1_g000001 Rmu_sc0010911.1_g000004 Rmu_sc0011989.1_g000005 Rmu_sc0013983.1_g000002 Rmu_sc0016910.1_g000001 Rmu_sc0017276.1_g000001 Rmu_sc0020812.1_g000004 Rmu_sc0024877.1_g000001 Rmu_sc0025932.1_g000003 Rmu_ssc0000432.1_g000018
rosa_roxburghii Rroxscaffold_1G00072180 Rroxscaffold_1G00073060 Rroxscaffold_1G00074760 Rroxscaffold_2G00084790 Rroxscaffold_2G00086850 Rroxscaffold_2G00121570 Rroxscaffold_2G00154120 Rroxscaffold_3G00263530 Rroxscaffold_3G00273960 Rroxscaffold_4G00284960 Rroxscaffold_4G00284970 Rroxscaffold_5G00370300 Rroxscaffold_6G00401620 Rroxscaffold_6G00401630 Rroxscaffold_6G00401640 Rroxscaffold_6G00416730 Rroxscaffold_6G00419520 Rroxscaffold_6G00419780 Rroxscaffold_6G00420290 Rroxscaffold_6G00427650 Rroxscaffold_7G00176150 Rroxscaffold_7G00211790
rosa_rugosa Rorug02G0239000
rosa_samantha Rh1DG375000 Rh2AG006800 Rh2AG009900 Rh2AG024700 Rh2AG297700 Rh2AG574100 Rh2AG589700 Rh2AG589800 Rh2DG008500 Rh2DG012500 Rh2DG025200 Rh2DG321300 Rh2DG594200 Rh2DG612500 Rh3AG021800 Rh3AG093100 Rh3AG095100 Rh3AG095700 Rh3AG233400 Rh3AG233500 Rh3AG233600 Rh3CG021300 Rh3CG097200 Rh3CG097300 Rh3CG099400 Rh3CG100200 Rh3CG103500 Rh3CG103600 Rh3CG106200 Rh3CG263600 Rh3CG263700 Rh4DG287300 Rh5AG034300 Rh5AG495600 Rh5DG032900 Rh5DG033000 Rh5DG051400 Rh5DG532200 Rh6BG054100 Rh6BG337400 Rh6CG053800 Rh6CG343700 Rh6CG343800 Rh7AG043600 Rh7AG043800 Rh7AG121200 Rh7AG121300 Rh7DG025000 Rh7DG043300 Rh7DG124500 Rh7DG124600
rosa_wichuraiana Rw1G033430 Rw2G000640 Rw2G001940 Rw2G001990 Rw2G023800 Rw2G047500 Rw2G049160 Rw3G008010 Rw3G008540 Rw3G021000 Rw4G024660 Rw5G003140 Rw6G005370 Rw7G041040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1155
AasI GACNNNNNNGTC 1 cut(s) 907
AccB7I CCANNNNNTGG 1 cut(s) 250
AccIII TCCGGA 1 cut(s) 505
AciI CCGC 2 cut(s) 54, 617
AclWI GGATC 4 cut(s) 497, 510, 844, 1113
AcoI YGGCCR 1 cut(s) 888
AcsI RAATTY 2 cut(s) 286, 391
AcuI CTGAAG 1 cut(s) 1037
AfaI GTAC 5 cut(s) 314, 371, 643, 980, 1093
AfiI CCNNNNNNNGG 5 cut(s) 85, 165, 250, 684, 1148
AflII CTTAAG 1 cut(s) 1165
AgeI ACCGGT 1 cut(s) 204
AgsI TTSAA 5 cut(s) 112, 635, 757, 1060, 1122
AluBI AGCT 5 cut(s) 324, 846, 884, 1182, 1228
AluI AGCT 5 cut(s) 324, 846, 884, 1182, 1228
Alw21I GWGCWC 1 cut(s) 769
Alw26I GTCTC 2 cut(s) 5, 451
Alw44I GTGCAC 1 cut(s) 765
AlwI GGATC 4 cut(s) 497, 510, 844, 1113
AlwNI CAGNNNCTG 1 cut(s) 588
Aor13HI TCCGGA 1 cut(s) 505
AoxI GGCC 2 cut(s) 156, 888
ApaLI GTGCAC 1 cut(s) 765
ApeKI GCWGC 8 cut(s) 39, 254, 321, 324, 363, 424, 1068, 1179
ApoI RAATTY 2 cut(s) 286, 391
ArsI GACNNNNNNTTYG 2 cut(s) 889, 921
AseI ATTAAT 1 cut(s) 1145
AsiGI ACCGGT 1 cut(s) 204
AspLEI GCGC 2 cut(s) 230, 704
AspS9I GGNCC 3 cut(s) 97, 168, 621
AsuC2I CCSGG 2 cut(s) 678, 834
AsuHPI GGTGA 3 cut(s) 428, 952, 1046
AvaII GGWCC 3 cut(s) 97, 168, 621
BaeGI GKGCMC 1 cut(s) 769
BalI TGGCCA 1 cut(s) 890
BamHI GGATCC 1 cut(s) 502
BbsI GAAGAC 1 cut(s) 376
Bbv12I GWGCWC 1 cut(s) 769
BbvI GCAGC 8 cut(s) 51, 241, 311, 333, 375, 436, 1080, 1191
BccI CCATC 2 cut(s) 692, 1211
BceAI ACGGC 1 cut(s) 334
BcgI CGANNNNNNTGC 2 cut(s) 523, 557
BclI TGATCA 1 cut(s) 69
BcnI CCSGG 2 cut(s) 678, 834
BcoDI GTCTC 2 cut(s) 5, 451
BfaI CTAG 1 cut(s) 276
BfmI CTRYAG 3 cut(s) 231, 589, 770
BfoI RGCGCY 1 cut(s) 231
BfrI CTTAAG 1 cut(s) 1165
BglII AGATCT 1 cut(s) 1112
BisI GCNGC 8 cut(s) 40, 255, 322, 325, 364, 425, 1069, 1180
BlsI GCNGC 8 cut(s) 41, 256, 323, 326, 365, 426, 1070, 1181
Bme1390I CCNGG 2 cut(s) 678, 834
Bme18I GGWCC 3 cut(s) 97, 168, 621
BmgT120I GGNCC 3 cut(s) 97, 168, 621
BmiI GGNNCC 3 cut(s) 504, 622, 623
BmrFI CCNGG 2 cut(s) 678, 834
BmsI GCATC 2 cut(s) 208, 960
BpiI GAAGAC 1 cut(s) 376
BplI GAGNNNNNCTC 2 cut(s) 650, 682
BpmI CTGGAG 1 cut(s) 706
BpuEI CTTGAG 1 cut(s) 148
BpuMI CCSGG 2 cut(s) 678, 834
BsaI GGTCTC 1 cut(s) 5
BsaWI WCCGGW 2 cut(s) 204, 505
Bsc4I CCNNNNNNNGG 5 cut(s) 85, 165, 250, 684, 1148
Bse118I RCCGGY 1 cut(s) 204
Bse1I ACTGG 3 cut(s) 689, 699, 1180
Bse3DI GCAATG 1 cut(s) 189
BseAI TCCGGA 1 cut(s) 505
BseGI GGATG 4 cut(s) 223, 601, 703, 975
BseLI CCNNNNNNNGG 5 cut(s) 85, 165, 250, 684, 1148
BseMI GCAATG 1 cut(s) 189
BseMII CTCAG 1 cut(s) 938
BseNI ACTGG 3 cut(s) 689, 699, 1180
BseRI GAGGAG 2 cut(s) 819, 894
BseSI GKGCMC 1 cut(s) 769
BseXI GCAGC 8 cut(s) 51, 241, 311, 333, 375, 436, 1080, 1191
Bsh1285I CGRYCG 1 cut(s) 305
BshFI GGCC 2 cut(s) 158, 890
BshTI ACCGGT 1 cut(s) 204
BsiEI CGRYCG 1 cut(s) 305
BsiHKAI GWGCWC 1 cut(s) 769
BsiSI CCGG 4 cut(s) 205, 506, 678, 834
BslFI GGGAC 2 cut(s) 224, 634
BslI CCNNNNNNNGG 5 cut(s) 85, 165, 250, 684, 1148
BsmAI GTCTC 2 cut(s) 5, 451
BsmFI GGGAC 2 cut(s) 224, 634
BsnI GGCC 2 cut(s) 158, 890
Bso31I GGTCTC 1 cut(s) 5
Bsp1286I GDGCHC 1 cut(s) 769
Bsp13I TCCGGA 1 cut(s) 505
Bsp1407I TGTACA 1 cut(s) 1091
Bsp143I GATC 7 cut(s) 69, 269, 302, 502, 836, 1105, 1112
BspACI CCGC 2 cut(s) 54, 617
BspANI GGCC 2 cut(s) 158, 890
BspCNI CTCAG 1 cut(s) 937
BspEI TCCGGA 1 cut(s) 505
BspLI GGNNCC 3 cut(s) 504, 622, 623
BspMAI CTGCAG 1 cut(s) 774
BspPI GGATC 4 cut(s) 497, 510, 844, 1113
BspQI GCTCTTC 1 cut(s) 303
BspTI CTTAAG 1 cut(s) 1165
BspTNI GGTCTC 1 cut(s) 5
BsrDI GCAATG 1 cut(s) 189
BsrFI RCCGGY 1 cut(s) 204
BsrGI TGTACA 1 cut(s) 1091
BsrI ACTGG 3 cut(s) 689, 699, 1180
BssAI RCCGGY 1 cut(s) 204
BssMI GATC 7 cut(s) 69, 269, 302, 502, 836, 1105, 1112
Bst4CI ACNGT 3 cut(s) 67, 612, 985
Bst6I CTCTTC 2 cut(s) 20, 303
BstAFI CTTAAG 1 cut(s) 1165
BstAUI TGTACA 1 cut(s) 1091
BstDEI CTNAG 4 cut(s) 153, 449, 924, 1109
BstENI CCTNNNNNAGG 2 cut(s) 83, 163
BstF5I GGATG 4 cut(s) 223, 601, 703, 975
BstH2I RGCGCY 1 cut(s) 231
BstHHI GCGC 2 cut(s) 230, 704
BstKTI GATC 7 cut(s) 72, 272, 305, 505, 839, 1108, 1115
BstMAI GTCTC 2 cut(s) 5, 451
BstMBI GATC 7 cut(s) 69, 269, 302, 502, 836, 1105, 1112
BstMCI CGRYCG 1 cut(s) 305
BstMWI GCNNNNNNNGC 2 cut(s) 227, 1234
BstNSI RCATGY 3 cut(s) 370, 708, 714
BstSCI CCNGG 2 cut(s) 676, 832
BstSFI CTRYAG 3 cut(s) 231, 589, 770
BstSLI GKGCMC 1 cut(s) 769
BstV1I GCAGC 8 cut(s) 51, 241, 311, 333, 375, 436, 1080, 1191
BstV2I GAAGAC 1 cut(s) 376
BstX2I RGATCY 3 cut(s) 502, 1105, 1112
BstYI RGATCY 3 cut(s) 502, 1105, 1112
BsuRI GGCC 2 cut(s) 158, 890
BtsCI GGATG 4 cut(s) 223, 601, 703, 975
BtsI GCAGTG 1 cut(s) 767
BtsIMutI CAGTG 1 cut(s) 767
CaiI CAGNNNCTG 1 cut(s) 588
CfoI GCGC 2 cut(s) 230, 704
Cfr10I RCCGGY 1 cut(s) 204
Cfr13I GGNCC 3 cut(s) 97, 168, 621
Csp6I GTAC 5 cut(s) 313, 370, 642, 979, 1092
CspAI ACCGGT 1 cut(s) 204
CspCI CAANNNNNGTGG 2 cut(s) 273, 308
CviAII CATG 7 cut(s) 367, 535, 626, 651, 705, 711, 1046
CviQI GTAC 5 cut(s) 313, 370, 642, 979, 1092
DdeI CTNAG 4 cut(s) 153, 449, 924, 1109
DpnI GATC 7 cut(s) 71, 271, 304, 504, 838, 1107, 1114
DpnII GATC 7 cut(s) 69, 269, 302, 502, 836, 1105, 1112
DrdI GACNNNNNNGTC 1 cut(s) 907
DseDI GACNNNNNNGTC 1 cut(s) 907
EaeI YGGCCR 1 cut(s) 888
Eam1104I CTCTTC 2 cut(s) 20, 303
EarI CTCTTC 2 cut(s) 20, 303
Eco147I AGGCCT 1 cut(s) 158
Eco31I GGTCTC 1 cut(s) 5
Eco47I GGWCC 3 cut(s) 97, 168, 621
Eco57I CTGAAG 1 cut(s) 1037
EcoNI CCTNNNNNAGG 2 cut(s) 83, 163
EcoO109I RGGNCCY 1 cut(s) 621
FaeI CATG 7 cut(s) 370, 538, 629, 654, 708, 714, 1049
FalI AAGNNNNNCTT 8 cut(s) 77, 109, 868, 900, 1102, 1134, 1148, 1180
FaqI GGGAC 2 cut(s) 224, 634
FatI CATG 7 cut(s) 366, 534, 625, 650, 704, 710, 1045
FauI CCCGC 1 cut(s) 610
FbaI TGATCA 1 cut(s) 69
Fnu4HI GCNGC 8 cut(s) 40, 255, 322, 325, 364, 425, 1069, 1180
FokI GGATG 4 cut(s) 230, 608, 710, 982
Fsp4HI GCNGC 8 cut(s) 40, 255, 322, 325, 364, 425, 1069, 1180
FspBI CTAG 1 cut(s) 276
GlaI GCGC 2 cut(s) 229, 703
GluI GCNGC 8 cut(s) 40, 255, 322, 325, 364, 425, 1069, 1180
GsuI CTGGAG 1 cut(s) 706
HaeII RGCGCY 1 cut(s) 231
HaeIII GGCC 2 cut(s) 158, 890
HapII CCGG 4 cut(s) 205, 506, 678, 834
HhaI GCGC 2 cut(s) 230, 704
Hin1II CATG 7 cut(s) 370, 538, 629, 654, 708, 714, 1049
Hin6I GCGC 2 cut(s) 228, 702
HinP1I GCGC 2 cut(s) 228, 702
HinfI GANTC 7 cut(s) 459, 540, 585, 665, 820, 922, 1076
HpaII CCGG 4 cut(s) 205, 506, 678, 834
HphI GGTGA 3 cut(s) 428, 952, 1046
Hpy166II GTNNAC 3 cut(s) 767, 981, 1013
Hpy188I TCNGA 3 cut(s) 927, 1006, 1081
Hpy188III TCNNGA 4 cut(s) 500, 506, 632, 799
Hpy8I GTNNAC 3 cut(s) 767, 981, 1013
Hpy99I CGWCG 2 cut(s) 176, 320
HpyAV CCTTC 2 cut(s) 169, 800
HpyCH4III ACNGT 3 cut(s) 67, 612, 985
HpyCH4V TGCA 8 cut(s) 194, 347, 710, 734, 767, 772, 862, 973
HpyF10VI GCNNNNNNNGC 2 cut(s) 227, 1234
HpyF3I CTNAG 4 cut(s) 153, 449, 924, 1109
Hsp92II CATG 7 cut(s) 370, 538, 629, 654, 708, 714, 1049
HspAI GCGC 2 cut(s) 228, 702
KflI GGGWCCC 1 cut(s) 621
Kpn2I TCCGGA 1 cut(s) 505
Ksp22I TGATCA 1 cut(s) 69
Kzo9I GATC 7 cut(s) 69, 269, 302, 502, 836, 1105, 1112
LguI GCTCTTC 1 cut(s) 303
LmnI GCTCC 1 cut(s) 881
Lsp1109I GCAGC 8 cut(s) 51, 241, 311, 333, 375, 436, 1080, 1191
LweI GCATC 2 cut(s) 208, 960
MaeI CTAG 1 cut(s) 276
MaeIII GTNAC 5 cut(s) 207, 554, 680, 895, 1191
MalI GATC 7 cut(s) 71, 271, 304, 504, 838, 1107, 1114
MboI GATC 7 cut(s) 69, 269, 302, 502, 836, 1105, 1112
MboII GAAGA 4 cut(s) 37, 290, 376, 897
MflI RGATCY 3 cut(s) 502, 1105, 1112
MhlI GDGCHC 1 cut(s) 769
MlsI TGGCCA 1 cut(s) 890
MluCI AATT 6 cut(s) 286, 391, 567, 635, 1086, 1122
MluNI TGGCCA 1 cut(s) 890
MlyI GAGTC 3 cut(s) 453, 659, 916
MmeI TCCRAC 1 cut(s) 973
MnlI CCTC 7 cut(s) 21, 130, 149, 292, 658, 840, 872
Mox20I TGGCCA 1 cut(s) 890
MroI TCCGGA 1 cut(s) 505
MscI TGGCCA 1 cut(s) 890
MseI TTAA 3 cut(s) 329, 1145, 1166
MslI CAYNNNNRTG 2 cut(s) 709, 729
Msp20I TGGCCA 1 cut(s) 890
MspA1I CMGCKG 1 cut(s) 324
MspCI CTTAAG 1 cut(s) 1165
MspI CCGG 4 cut(s) 205, 506, 678, 834
MspR9I CCNGG 2 cut(s) 678, 834
MwoI GCNNNNNNNGC 2 cut(s) 227, 1234
NciI CCSGG 2 cut(s) 678, 834
NdeII GATC 7 cut(s) 69, 269, 302, 502, 836, 1105, 1112
NlaIII CATG 7 cut(s) 370, 538, 629, 654, 708, 714, 1049
NlaIV GGNNCC 3 cut(s) 504, 622, 623
NmeAIII GCCGAG 1 cut(s) 647
NmuCI GTSAC 1 cut(s) 895
NspI RCATGY 3 cut(s) 370, 708, 714
PceI AGGCCT 1 cut(s) 158
PciSI GCTCTTC 1 cut(s) 303
PcsI WCGNNNNNNNCGW 2 cut(s) 845, 905
PfeI GAWTC 4 cut(s) 540, 585, 820, 1076
PflMI CCANNNNNTGG 1 cut(s) 250
PfoI TCCNGGA 1 cut(s) 832
PinAI ACCGGT 1 cut(s) 204
PkrI GCNGC 8 cut(s) 41, 256, 323, 326, 365, 426, 1070, 1181
Ple19I CGATCG 1 cut(s) 305
PleI GAGTC 3 cut(s) 453, 659, 916
PpsI GAGTC 3 cut(s) 453, 659, 916
PpuMI RGGWCCY 1 cut(s) 621
PshBI ATTAAT 1 cut(s) 1145
PsiI TTATAA 1 cut(s) 1155
Psp5II RGGWCCY 1 cut(s) 621
PspN4I GGNNCC 3 cut(s) 504, 622, 623
PspPI GGNCC 3 cut(s) 97, 168, 621
PspPPI RGGWCCY 1 cut(s) 621
PstI CTGCAG 1 cut(s) 774
PstNI CAGNNNCTG 1 cut(s) 588
PsuI RGATCY 3 cut(s) 502, 1105, 1112
PvuI CGATCG 1 cut(s) 305
PvuII CAGCTG 1 cut(s) 324
RsaI GTAC 5 cut(s) 314, 371, 643, 980, 1093
RsaNI GTAC 5 cut(s) 313, 370, 642, 979, 1092
RseI CAYNNNNRTG 2 cut(s) 709, 729
SapI GCTCTTC 1 cut(s) 303
SaqAI TTAA 3 cut(s) 329, 1145, 1166
SatI GCNGC 8 cut(s) 40, 255, 322, 325, 364, 425, 1069, 1180
Sau3AI GATC 7 cut(s) 69, 269, 302, 502, 836, 1105, 1112
Sau96I GGNCC 3 cut(s) 97, 168, 621
SchI GAGTC 3 cut(s) 453, 659, 916
ScrFI CCNGG 2 cut(s) 678, 834
SduI GDGCHC 1 cut(s) 769
SfaNI GCATC 2 cut(s) 208, 960
SfcI CTRYAG 3 cut(s) 231, 589, 770
SinI GGWCC 3 cut(s) 97, 168, 621
SmiMI CAYNNNNRTG 2 cut(s) 709, 729
SmlI CTYRAG 2 cut(s) 163, 1165
SmoI CTYRAG 2 cut(s) 163, 1165
Sse9I AATT 6 cut(s) 286, 391, 567, 635, 1086, 1122
SseBI AGGCCT 1 cut(s) 158
SsiI CCGC 2 cut(s) 54, 617
SspMI CTAG 1 cut(s) 276
StuI AGGCCT 1 cut(s) 158
StyD4I CCNGG 2 cut(s) 676, 832
TaaI ACNGT 3 cut(s) 67, 612, 985
TaqI TCGA 6 cut(s) 174, 268, 301, 359, 543, 848
TaqII GACCGA 1 cut(s) 295
TasI AATT 6 cut(s) 286, 391, 567, 635, 1086, 1122
TatI WGTACW 3 cut(s) 369, 978, 1091
TfiI GAWTC 4 cut(s) 540, 585, 820, 1076
Tru1I TTAA 3 cut(s) 329, 1145, 1166
Tru9I TTAA 3 cut(s) 329, 1145, 1166
TscAI CASTG 1 cut(s) 774
TseFI GTSAC 1 cut(s) 895
TseI GCWGC 8 cut(s) 39, 254, 321, 324, 363, 424, 1068, 1179
Tsp45I GTSAC 1 cut(s) 895
TspDTI ATGAA 4 cut(s) 38, 178, 833, 959
TspGWI ACGGA 2 cut(s) 131, 160
TspRI CASTG 1 cut(s) 774
Van91I CCANNNNNTGG 1 cut(s) 250
Vha464I CTTAAG 1 cut(s) 1165
VneI GTGCAC 1 cut(s) 765
VpaK11BI GGWCC 3 cut(s) 97, 168, 621
VspI ATTAAT 1 cut(s) 1145
XagI CCTNNNNNAGG 2 cut(s) 83, 163
XapI RAATTY 2 cut(s) 286, 391
XceI RCATGY 3 cut(s) 370, 708, 714
XcmI CCANNNNNNNNNTGG 1 cut(s) 395
XspI CTAG 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.